ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast52c12 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 129 bits (65), Expect = 9e-27 Identities = 131/153 (85%) Strand = Plus / Minus Query: 188 ccgccgccgctacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtc 247 ||||||||||||||| || ||||||||| | || || |||||||| |||||||| | || Sbjct: 11017430 ccgccgccgctacggcgcctgggccgtcatcacggggccaacgtccggcatcgggcgctc 11017371 Query: 248 catggccctggagctcgcgcgcttgggcctcaacctcgtcctcgtcggccgcgaccccgc 307 | |||| ||||||||||| ||| ||||||||||||||||||||||||||||||||| || Sbjct: 11017370 cgtggcgctggagctcgcccgccggggcctcaacctcgtcctcgtcggccgcgacccggc 11017311 Query: 308 caagctccaggatatctccgagaccatctccaa 340 |||||||| || |||| ||| |||||||||| Sbjct: 11017310 caagctccgcgacgtctcggaggccatctccaa 11017278 Score = 119 bits (60), Expect = 9e-24 Identities = 120/140 (85%) Strand = Plus / Minus Query: 188 ccgccgccgctacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtc 247 ||||||||| ||||| | |||||||||||| ||||| |||||||| |||||||||| | Sbjct: 10977107 ccgccgccggtacggcgaatgggccgtcgtcaccgggccaacgtccggcatcggccgtgc 10977048 Query: 248 catggccctggagctcgcgcgcttgggcctcaacctcgtcctcgtcggccgcgaccccgc 307 |||||| ||||||||||||||| |||||||||||||| ||||||||||| ||||| || Sbjct: 10977047 catggcgctggagctcgcgcgccacggcctcaacctcgtgctcgtcggccgtgacccagc 10976988 Query: 308 caagctccaggatatctccg 327 || |||| ||| ||||||| Sbjct: 10976987 catcctccgggagatctccg 10976968 Score = 105 bits (53), Expect = 1e-19 Identities = 116/137 (84%) Strand = Plus / Minus Query: 191 ccgccgctacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtccat 250 |||||| ||||| || ||||||||| | ||||| || ||||| ||||||||| |||| Sbjct: 10960825 ccgccggtacggcgcgtgggccgtcatcaccgggccgacgtccggcatcggctgcgccat 10960766 Query: 251 ggccctggagctcgcgcgcttgggcctcaacctcgtcctcgtcggccgcgaccccgccaa 310 ||| ||||||||||||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 10960765 ggcgctggagctcgcgcgccgcggcctcaacctcgtgctcgtcggccgtgaccccgccag 10960706 Query: 311 gctccaggatatctccg 327 ||||| ||| ||||||| Sbjct: 10960705 gctccgggagatctccg 10960689 Score = 103 bits (52), Expect = 5e-19 Identities = 109/128 (85%) Strand = Plus / Minus Query: 188 ccgccgccgctacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtc 247 ||||||||| ||||| | ||||||||||| ||||| || ||||| |||||||||| | Sbjct: 11023993 ccgccgccggtacggctcgtgggccgtcgtcaccgggccgacgtcaggcatcggccgtgc 11023934 Query: 248 catggccctggagctcgcgcgcttgggcctcaacctcgtcctcgtcggccgcgaccccgc 307 |||||| |||||||||||| | ||||||||| |||||||||||||||| |||||||| Sbjct: 11023933 catggcgctggagctcgcggggcgcggcctcaacgtcgtcctcgtcggccgtgaccccgc 11023874 Query: 308 caagctcc 315 |||||||| Sbjct: 11023873 caagctcc 11023866 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 402 ggggacgaggcggtgcggcgtctccgggaggccgtggaggggctggacgtgggggtgctg 461 |||||||||||||||||||| || |||||||| |||| |||||||||||| |||||| || Sbjct: 11017210 ggggacgaggcggtgcggcggctgcgggaggcggtggcggggctggacgtcggggtggtg 11017151 Query: 462 gtgaaca 468 ||||||| Sbjct: 11017150 gtgaaca 11017144 Score = 83.8 bits (42), Expect = 5e-13 Identities = 102/122 (83%) Strand = Plus / Minus Query: 188 ccgccgccgctacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtc 247 ||||||||| ||||| | ||||||||||| ||||| |||||||| || ||||||| | Sbjct: 10966265 ccgccgccggtacggcgagtgggccgtcgtcaccgggccaacgtccggtatcggccgtgc 10966206 Query: 248 catggccctggagctcgcgcgcttgggcctcaacctcgtcctcgtcggccgcgaccccgc 307 |||||| |||||||||||||| |||||||| ||||| ||||||||||| ||||| || Sbjct: 10966205 catggcgctggagctcgcgcgtcacggcctcaatctcgtgctcgtcggccgtgacccggc 10966146 Query: 308 ca 309 || Sbjct: 10966145 ca 10966144 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 415 tgcggcgtctccgggaggccgtggaggggctggacgtgggggtgctggtgaaca 468 ||||||| || |||||||| ||||||||||||||||| |||||| ||||||||| Sbjct: 10976880 tgcggcggctgcgggaggcggtggaggggctggacgtcggggtggtggtgaaca 10976827 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 415 tgcggcgtctccgggaggccgtggaggggctggacgtgggggtgctggtgaaca 468 ||||||| || ||||||||||||| |||||||||||| |||||| ||||||||| Sbjct: 10960598 tgcggcggctgcgggaggccgtggcggggctggacgtcggggtggtggtgaaca 10960545 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 273 ggcctcaacctcgtcctcgtcggccgcgaccccgccaagctccaggatatctcc 326 |||||||||||||| ||||||||||| ||||||||||| ||| |||| |||||| Sbjct: 10947700 ggcctcaacctcgtgctcgtcggccgtgaccccgccaacctcgaggagatctcc 10947647 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 435 gtggaggggctggacgtgggggtgctggtgaaca 468 ||||||||||||||||| |||||| ||||||||| Sbjct: 11023222 gtggaggggctggacgttggggtggtggtgaaca 11023189 Score = 40.1 bits (20), Expect = 6.4 Identities = 83/104 (79%) Strand = Plus / Minus Query: 355 agactaagaccgtcctcttcgacctcgccctcatcgccactcctcaaggggacgaggcgg 414 |||| |||||||| | ||||||||| | ||| | || ||||| || || |||||| || Sbjct: 10947618 agaccaagaccgtggtgttcgacctctcactcgtggcgactccccacggcgacgagccgc 10947559 Query: 415 tgcggcgtctccgggaggccgtggaggggctggacgtgggggtg 458 |||||| ||| ||||| | |||||||||||||| || |||||| Sbjct: 10947558 tgcggcagctcagggagacggtggaggggctggatgtcggggtg 10947515
>dbj|AP003524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0501G08 Length = 173505 Score = 129 bits (65), Expect = 9e-27 Identities = 131/153 (85%) Strand = Plus / Minus Query: 188 ccgccgccgctacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtc 247 ||||||||||||||| || ||||||||| | || || |||||||| |||||||| | || Sbjct: 101512 ccgccgccgctacggcgcctgggccgtcatcacggggccaacgtccggcatcgggcgctc 101453 Query: 248 catggccctggagctcgcgcgcttgggcctcaacctcgtcctcgtcggccgcgaccccgc 307 | |||| ||||||||||| ||| ||||||||||||||||||||||||||||||||| || Sbjct: 101452 cgtggcgctggagctcgcccgccggggcctcaacctcgtcctcgtcggccgcgacccggc 101393 Query: 308 caagctccaggatatctccgagaccatctccaa 340 |||||||| || |||| ||| |||||||||| Sbjct: 101392 caagctccgcgacgtctcggaggccatctccaa 101360 Score = 119 bits (60), Expect = 9e-24 Identities = 120/140 (85%) Strand = Plus / Minus Query: 188 ccgccgccgctacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtc 247 ||||||||| ||||| | |||||||||||| ||||| |||||||| |||||||||| | Sbjct: 61189 ccgccgccggtacggcgaatgggccgtcgtcaccgggccaacgtccggcatcggccgtgc 61130 Query: 248 catggccctggagctcgcgcgcttgggcctcaacctcgtcctcgtcggccgcgaccccgc 307 |||||| ||||||||||||||| |||||||||||||| ||||||||||| ||||| || Sbjct: 61129 catggcgctggagctcgcgcgccacggcctcaacctcgtgctcgtcggccgtgacccagc 61070 Query: 308 caagctccaggatatctccg 327 || |||| ||| ||||||| Sbjct: 61069 catcctccgggagatctccg 61050 Score = 105 bits (53), Expect = 1e-19 Identities = 116/137 (84%) Strand = Plus / Minus Query: 191 ccgccgctacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtccat 250 |||||| ||||| || ||||||||| | ||||| || ||||| ||||||||| |||| Sbjct: 44907 ccgccggtacggcgcgtgggccgtcatcaccgggccgacgtccggcatcggctgcgccat 44848 Query: 251 ggccctggagctcgcgcgcttgggcctcaacctcgtcctcgtcggccgcgaccccgccaa 310 ||| ||||||||||||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 44847 ggcgctggagctcgcgcgccgcggcctcaacctcgtgctcgtcggccgtgaccccgccag 44788 Query: 311 gctccaggatatctccg 327 ||||| ||| ||||||| Sbjct: 44787 gctccgggagatctccg 44771 Score = 103 bits (52), Expect = 5e-19 Identities = 109/128 (85%) Strand = Plus / Minus Query: 188 ccgccgccgctacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtc 247 ||||||||| ||||| | ||||||||||| ||||| || ||||| |||||||||| | Sbjct: 108075 ccgccgccggtacggctcgtgggccgtcgtcaccgggccgacgtcaggcatcggccgtgc 108016 Query: 248 catggccctggagctcgcgcgcttgggcctcaacctcgtcctcgtcggccgcgaccccgc 307 |||||| |||||||||||| | ||||||||| |||||||||||||||| |||||||| Sbjct: 108015 catggcgctggagctcgcggggcgcggcctcaacgtcgtcctcgtcggccgtgaccccgc 107956 Query: 308 caagctcc 315 |||||||| Sbjct: 107955 caagctcc 107948 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 402 ggggacgaggcggtgcggcgtctccgggaggccgtggaggggctggacgtgggggtgctg 461 |||||||||||||||||||| || |||||||| |||| |||||||||||| |||||| || Sbjct: 101292 ggggacgaggcggtgcggcggctgcgggaggcggtggcggggctggacgtcggggtggtg 101233 Query: 462 gtgaaca 468 ||||||| Sbjct: 101232 gtgaaca 101226 Score = 83.8 bits (42), Expect = 5e-13 Identities = 102/122 (83%) Strand = Plus / Minus Query: 188 ccgccgccgctacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtc 247 ||||||||| ||||| | ||||||||||| ||||| |||||||| || ||||||| | Sbjct: 50347 ccgccgccggtacggcgagtgggccgtcgtcaccgggccaacgtccggtatcggccgtgc 50288 Query: 248 catggccctggagctcgcgcgcttgggcctcaacctcgtcctcgtcggccgcgaccccgc 307 |||||| |||||||||||||| |||||||| ||||| ||||||||||| ||||| || Sbjct: 50287 catggcgctggagctcgcgcgtcacggcctcaatctcgtgctcgtcggccgtgacccggc 50228 Query: 308 ca 309 || Sbjct: 50227 ca 50226 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 415 tgcggcgtctccgggaggccgtggaggggctggacgtgggggtgctggtgaaca 468 ||||||| || |||||||| ||||||||||||||||| |||||| ||||||||| Sbjct: 60962 tgcggcggctgcgggaggcggtggaggggctggacgtcggggtggtggtgaaca 60909 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 415 tgcggcgtctccgggaggccgtggaggggctggacgtgggggtgctggtgaaca 468 ||||||| || ||||||||||||| |||||||||||| |||||| ||||||||| Sbjct: 44680 tgcggcggctgcgggaggccgtggcggggctggacgtcggggtggtggtgaaca 44627 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 273 ggcctcaacctcgtcctcgtcggccgcgaccccgccaagctccaggatatctcc 326 |||||||||||||| ||||||||||| ||||||||||| ||| |||| |||||| Sbjct: 31782 ggcctcaacctcgtgctcgtcggccgtgaccccgccaacctcgaggagatctcc 31729 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 435 gtggaggggctggacgtgggggtgctggtgaaca 468 ||||||||||||||||| |||||| ||||||||| Sbjct: 107304 gtggaggggctggacgttggggtggtggtgaaca 107271 Score = 40.1 bits (20), Expect = 6.4 Identities = 83/104 (79%) Strand = Plus / Minus Query: 355 agactaagaccgtcctcttcgacctcgccctcatcgccactcctcaaggggacgaggcgg 414 |||| |||||||| | ||||||||| | ||| | || ||||| || || |||||| || Sbjct: 31700 agaccaagaccgtggtgttcgacctctcactcgtggcgactccccacggcgacgagccgc 31641 Query: 415 tgcggcgtctccgggaggccgtggaggggctggacgtgggggtg 458 |||||| ||| ||||| | |||||||||||||| || |||||| Sbjct: 31640 tgcggcagctcagggagacggtggaggggctggatgtcggggtg 31597
>dbj|AK109790.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-D07, full insert sequence Length = 1393 Score = 129 bits (65), Expect = 9e-27 Identities = 131/153 (85%) Strand = Plus / Plus Query: 188 ccgccgccgctacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtc 247 ||||||||||||||| || ||||||||| | || || |||||||| |||||||| | || Sbjct: 215 ccgccgccgctacggcgcctgggccgtcatcacggggccaacgtccggcatcgggcgctc 274 Query: 248 catggccctggagctcgcgcgcttgggcctcaacctcgtcctcgtcggccgcgaccccgc 307 | |||| ||||||||||| ||| ||||||||||||||||||||||||||||||||| || Sbjct: 275 cgtggcgctggagctcgcccgccggggcctcaacctcgtcctcgtcggccgcgacccggc 334 Query: 308 caagctccaggatatctccgagaccatctccaa 340 |||||||| || |||| ||| |||||||||| Sbjct: 335 caagctccgcgacgtctcggaggccatctccaa 367 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 402 ggggacgaggcggtgcggcgtctccgggaggccgtggaggggctggacgtgggggtgctg 461 |||||||||||||||||||| || |||||||| |||| |||||||||||| |||||| || Sbjct: 435 ggggacgaggcggtgcggcggctgcgggaggcggtggcggggctggacgtcggggtggtg 494 Query: 462 gtgaaca 468 ||||||| Sbjct: 495 gtgaaca 501
>dbj|AK067625.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013113L03, full insert sequence Length = 1209 Score = 119 bits (60), Expect = 9e-24 Identities = 120/140 (85%) Strand = Plus / Plus Query: 188 ccgccgccgctacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtc 247 ||||||||| ||||| | |||||||||||| ||||| |||||||| |||||||||| | Sbjct: 302 ccgccgccggtacggcgaatgggccgtcgtcaccgggccaacgtccggcatcggccgtgc 361 Query: 248 catggccctggagctcgcgcgcttgggcctcaacctcgtcctcgtcggccgcgaccccgc 307 |||||| ||||||||||||||| |||||||||||||| ||||||||||| ||||| || Sbjct: 362 catggcgctggagctcgcgcgccacggcctcaacctcgtgctcgtcggccgtgacccagc 421 Query: 308 caagctccaggatatctccg 327 || |||| ||| ||||||| Sbjct: 422 catcctccgggagatctccg 441 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 415 tgcggcgtctccgggaggccgtggaggggctggacgtgggggtgctggtgaaca 468 ||||||| || |||||||| ||||||||||||||||| |||||| ||||||||| Sbjct: 529 tgcggcggctgcgggaggcggtggaggggctggacgtcggggtggtggtgaaca 582
>dbj|AK060501.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-G10, full insert sequence Length = 1210 Score = 119 bits (60), Expect = 9e-24 Identities = 120/140 (85%) Strand = Plus / Plus Query: 188 ccgccgccgctacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtc 247 ||||||||| ||||| | |||||||||||| ||||| |||||||| |||||||||| | Sbjct: 301 ccgccgccggtacggcgaatgggccgtcgtcaccgggccaacgtccggcatcggccgtgc 360 Query: 248 catggccctggagctcgcgcgcttgggcctcaacctcgtcctcgtcggccgcgaccccgc 307 |||||| ||||||||||||||| |||||||||||||| ||||||||||| ||||| || Sbjct: 361 catggcgctggagctcgcgcgccacggcctcaacctcgtgctcgtcggccgtgacccagc 420 Query: 308 caagctccaggatatctccg 327 || |||| ||| ||||||| Sbjct: 421 catcctccgggagatctccg 440 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 415 tgcggcgtctccgggaggccgtggaggggctggacgtgggggtgctggtgaaca 468 ||||||| || |||||||| ||||||||||||||||| |||||| ||||||||| Sbjct: 528 tgcggcggctgcgggaggcggtggaggggctggacgtcggggtggtggtgaaca 581
>dbj|AK066533.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073H04, full insert sequence Length = 1345 Score = 105 bits (53), Expect = 1e-19 Identities = 116/137 (84%) Strand = Plus / Plus Query: 191 ccgccgctacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtccat 250 |||||| ||||| || ||||||||| | ||||| || ||||| ||||||||| |||| Sbjct: 210 ccgccggtacggcgcgtgggccgtcatcaccgggccgacgtccggcatcggctgcgccat 269 Query: 251 ggccctggagctcgcgcgcttgggcctcaacctcgtcctcgtcggccgcgaccccgccaa 310 ||| ||||||||||||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 270 ggcgctggagctcgcgcgccgcggcctcaacctcgtgctcgtcggccgtgaccccgccag 329 Query: 311 gctccaggatatctccg 327 ||||| ||| ||||||| Sbjct: 330 gctccgggagatctccg 346 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 415 tgcggcgtctccgggaggccgtggaggggctggacgtgggggtgctggtgaaca 468 ||||||| || ||||||||||||| |||||||||||| |||||| ||||||||| Sbjct: 437 tgcggcggctgcgggaggccgtggcggggctggacgtcggggtggtggtgaaca 490
>gb|AY196196.1| Brassica napus putative 3-ketoacyl-CoA reductase 1 mRNA, complete cds Length = 960 Score = 60.0 bits (30), Expect = 7e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 273 ggcctcaacctcgtcctcgtcggccgcgaccccgccaagctc 314 |||||||||||||||||||||| |||| |||||| ||||||| Sbjct: 223 ggcctcaacctcgtcctcgtcgcccgcaaccccgacaagctc 264
>gb|AC128642.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OJ1115_A03 map S20262S, complete sequence Length = 149553 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 431 ggccgtggaggggctggacgtgggggtgctggtgaaca 468 ||||||||||||||| ||||||||| |||| ||||||| Sbjct: 94326 ggccgtggaggggctcgacgtggggctgctcgtgaaca 94363
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 431 ggccgtggaggggctggacgtgggggtgctggtgaaca 468 ||||||||||||||| ||||||||| |||| ||||||| Sbjct: 13377973 ggccgtggaggggctcgacgtggggctgctcgtgaaca 13378010
>gb|AY196197.1| Brassica napus putative 3-ketoacyl-CoA reductase 2 mRNA, complete cds Length = 960 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 273 ggcctcaacctcgtcctcgtcggccgcgaccccgccaagctc 314 |||||| ||||||||||||||| |||| |||||| ||||||| Sbjct: 223 ggcctccacctcgtcctcgtcgcccgcaaccccgacaagctc 264
>dbj|AK059916.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-E12, full insert sequence Length = 1333 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 431 ggccgtggaggggctggacgtgggggtgctggtgaaca 468 ||||||||||||||| ||||||||| |||| ||||||| Sbjct: 464 ggccgtggaggggctcgacgtggggctgctcgtgaaca 501
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 431 ggccgtggaggggctggacgtgggggtgctggtgaaca 468 ||||||||||||||| ||||||||| |||| ||||||| Sbjct: 13458152 ggccgtggaggggctcgacgtggggctgctcgtgaaca 13458189
>gb|AF302098.1| Zea mays beta-ketoacyl reductase (gl8) gene, gl8-B73 allele, complete cds Length = 6817 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 189 cgccgccgctacggggcatgggccgtcgtgac 220 |||||||||||||| || |||||||||||||| Sbjct: 3155 cgccgccgctacggcgcctgggccgtcgtgac 3186
>gb|U89509.2|ZMU89509 Zea mays b-keto acyl reductase (glossy8) mRNA, complete cds Length = 1374 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 189 cgccgccgctacggggcatgggccgtcgtgac 220 |||||||||||||| || |||||||||||||| Sbjct: 282 cgccgccgctacggcgcctgggccgtcgtgac 313
>gb|AF348370.1| Zea mays inbred Q66 beta-keto acyl reductase gene, partial cds Length = 721 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 189 cgccgccgctacggggcatgggccgtcgtgac 220 |||||||||||||| || |||||||||||||| Sbjct: 562 cgccgccgctacggcgcctgggccgtcgtgac 593
>gb|AF348369.1| Zea mays inbred Q67 beta-keto acyl reductase gene, partial cds Length = 945 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 189 cgccgccgctacggggcatgggccgtcgtgac 220 |||||||||||||| || |||||||||||||| Sbjct: 786 cgccgccgctacggcgcctgggccgtcgtgac 817
>gb|AF348368.1| Zea mays inbred B79 beta-keto acyl reductase gene, partial cds Length = 977 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 189 cgccgccgctacggggcatgggccgtcgtgac 220 |||||||||||||| || |||||||||||||| Sbjct: 818 cgccgccgctacggcgcctgggccgtcgtgac 849
>gb|AF348367.1| Zea mays inbred B77 beta-keto acyl reductase gene, partial cds Length = 1257 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 189 cgccgccgctacggggcatgggccgtcgtgac 220 |||||||||||||| || |||||||||||||| Sbjct: 1099 cgccgccgctacggcgcctgggccgtcgtgac 1130
>gb|AF527771.1| Zea mays cultivar B73 beta-ketoacyl reductase GL8B (gl8b) gene, complete cds Length = 7724 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 189 cgccgccgctacggggcatgggccgtcgtgac 220 |||||||||||||| || |||||||||||||| Sbjct: 3748 cgccgccgctacggcgcctgggccgtcgtgac 3779
>gb|U89510.1|HVU89510 Hordeum vulgare b-keto acyl reductase (glossy8) mRNA, complete cds Length = 1138 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 189 cgccgccgctacggggcatgggccgtcgtgaccgg 223 ||||||||||||||| | ||||||||||| ||||| Sbjct: 212 cgccgccgctacgggccctgggccgtcgtcaccgg 246
>ref|XM_471042.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 960 Score = 42.1 bits (21), Expect = 1.6 Identities = 120/153 (78%) Strand = Plus / Plus Query: 138 ctccgcctcctctcacacctcaccctcctcctgcgtcggccgaggaacccccgccgccgc 197 |||||||||||| | ||||| ||||| ||| || ||||| | | ||| ||||||| || Sbjct: 76 ctccgcctcctcccttacctcgccctctacctccgccggcccaaggacctccgccgctgc 135 Query: 198 tacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtccatggccctg 257 ||||| | |||||||| || ||||| || ||| | || |||| | ||||||||| || Sbjct: 136 tacggcgagtgggccgtggtcaccggcccgacgacggggctcgggcgatccatggccatg 195 Query: 258 gagctcgcgcgcttgggcctcaacctcgtcctc 290 |||||||| ||| ||| |||||||||||||| Sbjct: 196 gagctcgcccgccgcggcttcaacctcgtcctc 228
>ref|XM_370237.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein (MG06734.4) partial mRNA Length = 579 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 284 cgtcctcgtcggccgcgaccccgccaagctccaggat 320 |||||| ||||||||||| ||| ||||||| |||||| Sbjct: 96 cgtcctggtcggccgcgatcccaccaagctgcaggat 132
>emb|AL606631.2|OSJN00069 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0050O03, complete sequence Length = 140948 Score = 42.1 bits (21), Expect = 1.6 Identities = 120/153 (78%) Strand = Plus / Plus Query: 138 ctccgcctcctctcacacctcaccctcctcctgcgtcggccgaggaacccccgccgccgc 197 |||||||||||| | ||||| ||||| ||| || ||||| | | ||| ||||||| || Sbjct: 51487 ctccgcctcctcccttacctcgccctctacctccgccggcccaaggacctccgccgctgc 51546 Query: 198 tacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtccatggccctg 257 ||||| | |||||||| || ||||| || ||| | || |||| | ||||||||| || Sbjct: 51547 tacggcgagtgggccgtggtcaccggcccgacgacggggctcgggcgatccatggccatg 51606 Query: 258 gagctcgcgcgcttgggcctcaacctcgtcctc 290 |||||||| ||| ||| |||||||||||||| Sbjct: 51607 gagctcgcccgccgcggcttcaacctcgtcctc 51639
>gb|AC104299.2| Homo sapiens chromosome 3 clone RP11-129K20, complete sequence Length = 181444 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 142 gcctcctctcacacctcaccctcct 166 |||||||||||||||||| |||||| Sbjct: 97606 gcctcctctcacacctcagcctcct 97630
>gb|AC108521.1| Caenorhabditis briggsae cosmid CB004G08, complete sequence Length = 82505 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 tggagaaagtggaagagaaca 54 ||||||||||||||||||||| Sbjct: 36384 tggagaaagtggaagagaaca 36404
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.6 Identities = 120/153 (78%) Strand = Plus / Plus Query: 138 ctccgcctcctctcacacctcaccctcctcctgcgtcggccgaggaacccccgccgccgc 197 |||||||||||| | ||||| ||||| ||| || ||||| | | ||| ||||||| || Sbjct: 971768 ctccgcctcctcccttacctcgccctctacctccgccggcccaaggacctccgccgctgc 971827 Query: 198 tacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtccatggccctg 257 ||||| | |||||||| || ||||| || ||| | || |||| | ||||||||| || Sbjct: 971828 tacggcgagtgggccgtggtcaccggcccgacgacggggctcgggcgatccatggccatg 971887 Query: 258 gagctcgcgcgcttgggcctcaacctcgtcctc 290 |||||||| ||| ||| |||||||||||||| Sbjct: 971888 gagctcgcccgccgcggcttcaacctcgtcctc 971920
>dbj|AK064965.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001B01, full insert sequence Length = 1810 Score = 42.1 bits (21), Expect = 1.6 Identities = 120/153 (78%) Strand = Plus / Plus Query: 138 ctccgcctcctctcacacctcaccctcctcctgcgtcggccgaggaacccccgccgccgc 197 |||||||||||| | ||||| ||||| ||| || ||||| | | ||| ||||||| || Sbjct: 129 ctccgcctcctcccttacctcgccctctacctccgccggcccaaggacctccgccgctgc 188 Query: 198 tacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtccatggccctg 257 ||||| | |||||||| || ||||| || ||| | || |||| | ||||||||| || Sbjct: 189 tacggcgagtgggccgtggtcaccggcccgacgacggggctcgggcgatccatggccatg 248 Query: 258 gagctcgcgcgcttgggcctcaacctcgtcctc 290 |||||||| ||| ||| |||||||||||||| Sbjct: 249 gagctcgcccgccgcggcttcaacctcgtcctc 281
>gb|AF121253.1|AF121253 Cavia porcellus AE2 anion exchanger (AE2) mRNA, complete cds Length = 4042 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 420 cgtctccgggaggccgtggag 440 ||||||||||||||||||||| Sbjct: 1747 cgtctccgggaggccgtggag 1767
>gb|AC107085.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1764_D01, complete sequence Length = 164709 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cctcgtcctcgtcggccgcg 300 |||||||||||||||||||| Sbjct: 20619 cctcgtcctcgtcggccgcg 20600
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 ccctggccgtcctcggcgcg 116 |||||||||||||||||||| Sbjct: 2694601 ccctggccgtcctcggcgcg 2694620
>gb|AY186939.1| Trichlorobacter thiogenes strain K1 RNA polymerase beta subunit (rpoB) gene, partial cds Length = 640 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 tcgtcctcgtcggccgcgac 302 |||||||||||||||||||| Sbjct: 497 tcgtcctcgtcggccgcgac 516
>gb|AY186922.1| Geobacter bremensis strain Dfr1 rpoB pseudogene, partial sequence Length = 627 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 tcgtcctcgtcggccgcgac 302 |||||||||||||||||||| Sbjct: 498 tcgtcctcgtcggccgcgac 517
>gb|AY186933.1| Pelobacter masseliensis strain HHQ7 RNA polymerase beta subunit (rpoB) gene, partial cds Length = 632 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 tcgtcctcgtcggccgcgac 302 |||||||||||||||||||| Sbjct: 497 tcgtcctcgtcggccgcgac 516
>ref|XM_596727.2| PREDICTED: Bos taurus hypothetical LOC518534 (LOC518534), mRNA Length = 558 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 432 gccgtggaggggctggacgtgggg 455 ||||||||||||||||| |||||| Sbjct: 412 gccgtggaggggctggaggtgggg 389
>ref|XM_746475.1| Aspergillus fumigatus Af293 COP9 signalosome subunit 7 CsnG (Afu4g12630) partial mRNA Length = 966 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 137 gctccgcctcctctcacacctcaccctc 164 ||||||||||||||| | |||||||||| Sbjct: 303 gctccgcctcctctcgctcctcaccctc 330
>emb|CR382335.12| Zebrafish DNA sequence from clone DKEY-56I16 in linkage group 14, complete sequence Length = 159057 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 cctcaccctcctcctgcgtc 174 |||||||||||||||||||| Sbjct: 134140 cctcaccctcctcctgcgtc 134159
>ref|XM_750975.1| Aspergillus fumigatus Af293 serine peptidase, family S28 (Afu2g17330) partial mRNA Length = 1719 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 311 gctccaggatatctccgagaccat 334 ||||||||||| |||||||||||| Sbjct: 406 gctccaggataactccgagaccat 383
>ref|XM_546833.2| PREDICTED: Canis familiaris similar to homolog of yeast mRNA transport regulator 3 (LOC489713), mRNA Length = 851 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cctcgtcctcgtcggccgcg 300 |||||||||||||||||||| Sbjct: 111 cctcgtcctcgtcggccgcg 92
>emb|AL357506.10| Human DNA sequence from clone RP11-327K21 on chromosome 6, complete sequence Length = 159294 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 agaaagtggaagagaacatg 56 |||||||||||||||||||| Sbjct: 120529 agaaagtggaagagaacatg 120548
>emb|X79146.1|SLLINC S.lincolnensis (78-11) Lincomycin production genes Length = 36270 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 cgtcggccgcgaccccgcca 309 |||||||||||||||||||| Sbjct: 29889 cgtcggccgcgaccccgcca 29870
>emb|AL049489.1|SPBC1778 S.pombe chromosome II cosmid c1778 Length = 19011 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 agaaagtggaagagaacatg 56 |||||||||||||||||||| Sbjct: 4256 agaaagtggaagagaacatg 4275
>emb|AL662792.21| Mouse DNA sequence from clone RP23-52L14 on chromosome 11, complete sequence Length = 164120 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 gagaccatctccaaaaccca 346 |||||||||||||||||||| Sbjct: 156172 gagaccatctccaaaaccca 156191
>gb|AY547326.1| Geobacter pelophilus strain Dfr2 RNA polymerase beta subunit (rpob) gene, partial cds Length = 519 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 tcgtcctcgtcggccgcgac 302 |||||||||||||||||||| Sbjct: 389 tcgtcctcgtcggccgcgac 408
>gb|AC146706.8| Medicago truncatula clone mth2-108g5, complete sequence Length = 106753 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 144 ctcctctcacacctcaccctcctcctgc 171 |||||| |||||| |||||||||||||| Sbjct: 101948 ctcctcacacaccacaccctcctcctgc 101975
>gb|AY034032.1| Schizosaccharomyces pombe Rap1 (rap1) mRNA, complete cds Length = 2275 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 agaaagtggaagagaacatg 56 |||||||||||||||||||| Sbjct: 1783 agaaagtggaagagaacatg 1802
>gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome I, complete sequence Length = 691920 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 ggggacgaggcggtgcggcg 421 |||||||||||||||||||| Sbjct: 493580 ggggacgaggcggtgcggcg 493561
>ref|NM_001022207.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC1778.02), partial mRNA Length = 2082 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 agaaagtggaagagaacatg 56 |||||||||||||||||||| Sbjct: 1712 agaaagtggaagagaacatg 1731
>gb|AY224189.1| Medicago truncatula adenosylhomocysteinase (AHC2) gene, complete cds Length = 68460 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 144 ctcctctcacacctcaccctcctcctgc 171 |||||| |||||| |||||||||||||| Sbjct: 63209 ctcctcacacaccacaccctcctcctgc 63182
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cctcgtcctcgtcggccgcg 300 |||||||||||||||||||| Sbjct: 18853241 cctcgtcctcgtcggccgcg 18853222
>dbj|BA000013.4| Mesorhizobium loti MAFF303099 pMLa DNA, cpmplete genome Length = 351911 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcctcttcgacctcgccct 385 |||||||||||||||||||| Sbjct: 29612 gtcctcttcgacctcgccct 29593
>gb|AF165947.1|AF165947 Hepatitis D virus strain TWD2667 a-8 delta antigen gene, complete cds Length = 645 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 ccgtggaggggctggacgtg 452 |||||||||||||||||||| Sbjct: 101 ccgtggaggggctggacgtg 82
>ref|NM_207977.1| Eremothecium gossypii AAR083Cp (AAR083C), mRNA Length = 1617 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 ggggacgaggcggtgcggcg 421 |||||||||||||||||||| Sbjct: 412 ggggacgaggcggtgcggcg 431
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 371 cttcgacctcgccctcatcgccac 394 |||||||| ||||||||||||||| Sbjct: 125250 cttcgaccacgccctcatcgccac 125227
>emb|CR853287.6| Zebrafish DNA sequence from clone DKEYP-115G4 in linkage group 15, complete sequence Length = 169306 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 cctcaccctcctcctgcgtc 174 |||||||||||||||||||| Sbjct: 99410 cctcaccctcctcctgcgtc 99391
>gb|AF077526.1|AF077526 Homo sapiens parathyroid hormone-related protein receptor gene, partial cds Length = 3107 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 ggaggggctggacgtggggg 456 |||||||||||||||||||| Sbjct: 1195 ggaggggctggacgtggggg 1214
>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2 Length = 339972 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 gctccgcctcctctcacacc 156 |||||||||||||||||||| Sbjct: 47721 gctccgcctcctctcacacc 47702
>dbj|AB061738.1| Schizosaccharomyces pombe rap1 gene for Rap1, complete cds Length = 2896 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 agaaagtggaagagaacatg 56 |||||||||||||||||||| Sbjct: 2526 agaaagtggaagagaacatg 2545 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,415,003 Number of Sequences: 3902068 Number of extensions: 3415003 Number of successful extensions: 76205 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 57 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 75857 Number of HSP's gapped (non-prelim): 344 length of query: 471 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 449 effective length of database: 17,147,199,772 effective search space: 7699092697628 effective search space used: 7699092697628 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
