ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast52c11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RLA2A_ARATH (Q9SLF7) 60S acidic ribosomal protein P2-A 28 8.9

>RLA2A_ARATH (Q9SLF7) 60S acidic ribosomal protein P2-A|
          Length = 115

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -3

Query: 83  AVPSKAGGGEETVEWTDGGGKGKGAA 6
           +VPS  GGG      T GGG G GA+
Sbjct: 64  SVPSGGGGGVAVASATSGGGGGGGAS 89


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.133    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,272,509
Number of Sequences: 219361
Number of extensions: 382256
Number of successful extensions: 951
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
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