| Clone Name | bast52c11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_960356.1| Neurospora crassa OR74A hypothetical protein (NCU02676.1) partial mRNA Length = 1347 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 190 tgctgccgctcctgctcctgctgccggg 217 |||||| ||||||||||||||||||||| Sbjct: 284 tgctgctgctcctgctcctgctgccggg 257
>ref|XM_331874.1| Neurospora crassa OR74A hypothetical protein (NCU02676.1) partial mRNA Length = 1347 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 190 tgctgccgctcctgctcctgctgccggg 217 |||||| ||||||||||||||||||||| Sbjct: 284 tgctgctgctcctgctcctgctgccggg 257
>emb|BX842634.1| Neurospora crassa DNA linkage group I BAC contig B16B8 Length = 138191 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Plus Query: 190 tgctgccgctcctgctcctgctgccggg 217 |||||| ||||||||||||||||||||| Sbjct: 102012 tgctgctgctcctgctcctgctgccggg 102039
>emb|AJ439353.1|AGA439353 Anopheles gambiae BAC clone 30E5 Length = 167014 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 385 cgctccttcagcaccaccacctcc 408 |||||||||||||||||||||||| Sbjct: 135885 cgctccttcagcaccaccacctcc 135908
>emb|AL663057.7| Mouse DNA sequence from clone RP23-7J19 on chromosome 11 Contains the Centa2 gene for centaurin alpha 2, a novel gene and the 3' end of a novel gene, complete sequence Length = 70600 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||||||||||||||||||||| Sbjct: 53491 tgctgccgctcctgctcctgctgc 53514
>ref|XM_321544.1| Anopheles gambiae str. PEST ENSANGP00000008615 (ENSANGG00000006494), partial mRNA Length = 9978 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 385 cgctccttcagcaccaccacctcc 408 |||||||||||||||||||||||| Sbjct: 3203 cgctccttcagcaccaccacctcc 3180
>ref|NM_124144.3| Arabidopsis thaliana structural constituent of ribosome AT5G47700 mRNA, complete cds Length = 675 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 189 gtgctgccgctcctgctcctgctgccg 215 ||||||||||| ||||||||||||||| Sbjct: 365 gtgctgccgctgctgctcctgctgccg 391
>ref|NM_001031496.1| Gallus gallus ubiquitin specific peptidase 28 (USP28), mRNA Length = 4216 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 386 gctccttcagcaccaccacctcc 408 ||||||||||||||||||||||| Sbjct: 3107 gctccttcagcaccaccacctcc 3085
>gb|AY096430.1| Arabidopsis thaliana putative 60S acidic ribosomal protein P1 (At5g47700) mRNA, complete cds Length = 373 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 189 gtgctgccgctcctgctcctgctgccg 215 ||||||||||| ||||||||||||||| Sbjct: 248 gtgctgccgctgctgctcctgctgccg 274
>gb|AY070049.1| Arabidopsis thaliana putative 60S acidic ribosomal protein P1 (At5g47700) mRNA, complete cds Length = 596 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 189 gtgctgccgctcctgctcctgctgccg 215 ||||||||||| ||||||||||||||| Sbjct: 321 gtgctgccgctgctgctcctgctgccg 347
>emb|AJ720849.1| Gallus gallus mRNA for hypothetical protein, clone 27l24 Length = 4216 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 386 gctccttcagcaccaccacctcc 408 ||||||||||||||||||||||| Sbjct: 3107 gctccttcagcaccaccacctcc 3085
>emb|BX829927.1|CNS0A1HH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB46ZF05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 506 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 189 gtgctgccgctcctgctcctgctgccg 215 ||||||||||| ||||||||||||||| Sbjct: 254 gtgctgccgctgctgctcctgctgccg 280
>emb|BX829474.1|CNS0A1FF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB15ZH05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 488 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 189 gtgctgccgctcctgctcctgctgccg 215 ||||||||||| ||||||||||||||| Sbjct: 253 gtgctgccgctgctgctcctgctgccg 279
>emb|BX831816.1|CNS0A16C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH31ZA06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 547 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 189 gtgctgccgctcctgctcctgctgccg 215 ||||||||||| ||||||||||||||| Sbjct: 285 gtgctgccgctgctgctcctgctgccg 311
>emb|BX833376.1|CNS0A0I0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL4ZF08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 612 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 189 gtgctgccgctcctgctcctgctgccg 215 ||||||||||| ||||||||||||||| Sbjct: 299 gtgctgccgctgctgctcctgctgccg 325
>emb|BX841725.1|CNS09YL5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL50ZB10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 547 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 189 gtgctgccgctcctgctcctgctgccg 215 ||||||||||| ||||||||||||||| Sbjct: 285 gtgctgccgctgctgctcctgctgccg 311
>emb|BX841722.1|CNS09YL9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL4ZE02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 561 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 189 gtgctgccgctcctgctcctgctgccg 215 ||||||||||| ||||||||||||||| Sbjct: 299 gtgctgccgctgctgctcctgctgccg 325
>gb|AY085303.1| Arabidopsis thaliana clone 14401 mRNA, complete sequence Length = 676 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 189 gtgctgccgctcctgctcctgctgccg 215 ||||||||||| ||||||||||||||| Sbjct: 366 gtgctgccgctgctgctcctgctgccg 392
>dbj|AB016886.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCA23 Length = 82503 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 189 gtgctgccgctcctgctcctgctgccg 215 ||||||||||| ||||||||||||||| Sbjct: 5437 gtgctgccgctgctgctcctgctgccg 5411
>gb|AE017356.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 14, complete sequence Length = 762694 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 127 tttccccctcgcttcccttcctctcc 152 |||||||||||||||||| ||||||| Sbjct: 402400 tttccccctcgcttccctgcctctcc 402425
>gb|AC115818.9| Mus musculus chromosome 1, clone RP23-433A12, complete sequence Length = 186895 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 138 cttcccttcctctccttcctgc 159 |||||||||||||||||||||| Sbjct: 140671 cttcccttcctctccttcctgc 140650
>gb|AC121297.20| Mus musculus chromosome 1, clone RP23-326H11, complete sequence Length = 207496 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 138 cttcccttcctctccttcctgc 159 |||||||||||||||||||||| Sbjct: 203154 cttcccttcctctccttcctgc 203175
>ref|XM_849687.1| PREDICTED: Canis familiaris similar to testis specific, 10 interacting protein (LOC611966), mRNA Length = 1923 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 190 tgctgccgctcctgctcctgctgccg 215 ||||||||||||| |||||||||||| Sbjct: 1451 tgctgccgctcctcctcctgctgccg 1426
>ref|XM_568591.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNN01340) partial mRNA Length = 1633 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 127 tttccccctcgcttcccttcctctcc 152 |||||||||||||||||| ||||||| Sbjct: 1028 tttccccctcgcttccctgcctctcc 1053
>gb|AC127368.3| Mus musculus BAC clone RP23-22J14 from chromosome 18, complete sequence Length = 206102 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 140 tcccttcctctccttcctgccc 161 |||||||||||||||||||||| Sbjct: 47029 tcccttcctctccttcctgccc 47050
>gb|AC072054.10| Homo sapiens BAC clone RP11-33P21 from 7, complete sequence Length = 154037 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 132 ccctcgcttcccttcctctccttcct 157 ||||| |||||||||||||||||||| Sbjct: 128199 ccctcccttcccttcctctccttcct 128174 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 132 ccctcgcttcccttcctctccttc 155 ||||| |||||||||||||||||| Sbjct: 128367 ccctcccttcccttcctctccttc 128344
>gb|AC157787.6| Mus musculus chromosome 1, clone RP23-158A6, complete sequence Length = 199981 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 138 cttcccttcctctccttcctgc 159 |||||||||||||||||||||| Sbjct: 17404 cttcccttcctctccttcctgc 17425
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 251 gtcgaccaaccgcgccgcgccg 272 |||||||||||||||||||||| Sbjct: 4963753 gtcgaccaaccgcgccgcgccg 4963732
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 370 atgtcggcctccgtgcgctccttcagcacc 399 |||| ||||||||||| ||||||||||||| Sbjct: 5851 atgtaggcctccgtgccctccttcagcacc 5880
>emb|Z47554.1|ZMMHCF1 Z.mays mRNA for open reading frame Length = 1773 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 192 ctgccgctcctgctcctgctgc 213 |||||||||||||||||||||| Sbjct: 1202 ctgccgctcctgctcctgctgc 1181
>dbj|AK109099.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-A12, full insert sequence Length = 1237 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 194 gccgctcctgctcctgctgccg 215 |||||||||||||||||||||| Sbjct: 181 gccgctcctgctcctgctgccg 160
>gb|AY109146.1| Zea mays PCO137288 mRNA sequence Length = 1753 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 192 ctgccgctcctgctcctgctgc 213 |||||||||||||||||||||| Sbjct: 1163 ctgccgctcctgctcctgctgc 1142
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 370 atgtcggcctccgtgcgctccttcagcacc 399 |||| ||||||||||| ||||||||||||| Sbjct: 1530444 atgtaggcctccgtgccctccttcagcacc 1530473
>gb|AC183833.2| Pan troglodytes BAC clone CH251-141C5 from chromosome 7, complete sequence Length = 155911 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 386 gctccttcagcaccaccacctccac 410 ||||| ||||||||||||||||||| Sbjct: 25334 gctccctcagcaccaccacctccac 25358
>gb|AC183613.3| Pan troglodytes BAC clone CH251-171F23 from chromosome 7, complete sequence Length = 180545 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 386 gctccttcagcaccaccacctccac 410 ||||| ||||||||||||||||||| Sbjct: 31226 gctccctcagcaccaccacctccac 31202
>gb|AC093168.3| Homo sapiens BAC clone RP11-148M21 from 7, complete sequence Length = 148689 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 386 gctccttcagcaccaccacctccac 410 ||||| ||||||||||||||||||| Sbjct: 65083 gctccctcagcaccaccacctccac 65107
>ref|XM_863610.1| PREDICTED: Canis familiaris hypothetical protein LOC612195 (LOC612195), mRNA Length = 519 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 342 ccagcgcacggggcccagcac 362 ||||||||||||||||||||| Sbjct: 191 ccagcgcacggggcccagcac 171
>gb|AC129851.5| Homo sapiens X BAC RP11-669P14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 166653 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 tgctcccttccctttccctcc 29 ||||||||||||||||||||| Sbjct: 72242 tgctcccttccctttccctcc 72262
>emb|CR633887.2|CNS0EO2T Tetraodon nigroviridis full-length cDNA Length = 1407 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 ctcgtgctgccgctcctgctc 206 ||||||||||||||||||||| Sbjct: 285 ctcgtgctgccgctcctgctc 265
>gb|AE006462.1| Homo sapiens 16p13.3 sequence section 1 of 8 Length = 258002 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 190 tgctgccgctcctgctcctgctgcc 214 |||||| |||||||||||||||||| Sbjct: 19599 tgctgctgctcctgctcctgctgcc 19623
>dbj|AK126462.1| Homo sapiens cDNA FLJ44498 fis, clone UTERU3000645, moderately similar to CLAUDIN-4 Length = 4163 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 386 gctccttcagcaccaccacctccac 410 ||||| ||||||||||||||||||| Sbjct: 1505 gctccctcagcaccaccacctccac 1529
>dbj|AK126315.1| Homo sapiens cDNA FLJ44338 fis, clone TRACH3004786, moderately similar to CLAUDIN-4 Length = 4110 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 386 gctccttcagcaccaccacctccac 410 ||||| ||||||||||||||||||| Sbjct: 1453 gctccctcagcaccaccacctccac 1477
>gb|AC008144.5|AC008144 Drosophila melanogaster, chromosome 3R, region 93F-93F, BAC clone BACR04F21, complete sequence Length = 171226 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 189 gtgctgccgctcctgctcctgctgc 213 ||||||| ||||||||||||||||| Sbjct: 35072 gtgctgctgctcctgctcctgctgc 35096
>gb|BC015647.1| Homo sapiens, clone IMAGE:4650117, mRNA Length = 921 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 386 gctccttcagcaccaccacctccac 410 ||||| ||||||||||||||||||| Sbjct: 815 gctccctcagcaccaccacctccac 839
>gb|AE003737.3| Drosophila melanogaster chromosome 3R, section 75 of 118 of the complete sequence Length = 178251 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 189 gtgctgccgctcctgctcctgctgc 213 ||||||| ||||||||||||||||| Sbjct: 151312 gtgctgctgctcctgctcctgctgc 151288
>emb|CT009627.9| Mouse DNA sequence from clone RP23-71E4 on chromosome 16, complete sequence Length = 257276 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 ctcccttccctttccctccgc 31 ||||||||||||||||||||| Sbjct: 163734 ctcccttccctttccctccgc 163754
>gb|L39062.1|HUMIL9R Homo sapiens interleukin 9 receptor IL9R pseudogene, exons 1-9 Length = 13649 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 190 tgctgccgctcctgctcctgctgcc 214 |||||| |||||||||||||||||| Sbjct: 10071 tgctgctgctcctgctcctgctgcc 10047
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 183 ggactcgtgctgccgctcctgctcc 207 |||||||||| |||||||||||||| Sbjct: 2543329 ggactcgtgcagccgctcctgctcc 2543353
>emb|AL773591.7| Pig DNA sequence from clone XX-35B1, complete sequence Length = 118404 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 tgccggggcctccctcccctc 231 ||||||||||||||||||||| Sbjct: 9777 tgccggggcctccctcccctc 9797
>emb|Z84723.1|HSLAW2 Human DNA sequence from phage LAW2 from a contig from the tip of the short arm of chromosome 16, spanning 2Mb of 16p13.3 Contains Interleukin 9 receptor pseudogene Length = 17000 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 190 tgctgccgctcctgctcctgctgcc 214 |||||| |||||||||||||||||| Sbjct: 8961 tgctgctgctcctgctcctgctgcc 8985
>gb|M84016.1|HUMSUBTDA Human subtelomeric DNA sequence Length = 2930 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 190 tgctgccgctcctgctcctgctgcc 214 |||||| |||||||||||||||||| Sbjct: 192 tgctgctgctcctgctcctgctgcc 216
>ref|XM_481204.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1908 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 116 tgctgctgctcctgctcctgctgc 139
>gb|AC154623.2| Mus musculus BAC clone RP23-327K7 from chromosome 13, complete sequence Length = 190884 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 106073 tgctgctgctcctgctcctgctgc 106050 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 105578 tgctgctgctcctgctcctgctgc 105555
>gb|AC165164.4| Mus musculus BAC clone RP23-117C21 from chromosome 10, complete sequence Length = 189986 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||||||| ||||||||||||| Sbjct: 106543 tgctgccgctgctgctcctgctgc 106566
>gb|AC126115.5| Rattus norvegicus 4 BAC CH230-213L22 (Children's Hospital Oakland Research Institute) complete sequence Length = 214442 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 ccttcctctccttcctgccc 161 |||||||||||||||||||| Sbjct: 148399 ccttcctctccttcctgccc 148380
>gb|AC094571.8| Rattus norvegicus 20 BAC CH230-4L21 (Children's Hospital Oakland Research Institute) complete sequence Length = 230137 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 9578 tgctgctgctcctgctcctgctgc 9601
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 ctcgtgctgccgctcctgct 205 |||||||||||||||||||| Sbjct: 1517099 ctcgtgctgccgctcctgct 1517118
>ref|XM_581857.2| PREDICTED: Bos taurus similar to NG37 protein (LOC505555), mRNA Length = 2877 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 ctgccggggcctccctcccc 229 |||||||||||||||||||| Sbjct: 73 ctgccggggcctccctcccc 92
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 accgccgccatgtcggcctc 380 |||||||||||||||||||| Sbjct: 46556 accgccgccatgtcggcctc 46537
>ref|XM_615174.2| PREDICTED: Bos taurus similar to Extracellular sulfatase Sulf-1 precursor (HSulf-1) (LOC535166), partial mRNA Length = 3227 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 cccacggccccgaggactcg 189 |||||||||||||||||||| Sbjct: 709 cccacggccccgaggactcg 728
>ref|XM_866913.1| PREDICTED: Bos taurus similar to tsukushi (LOC529661), mRNA Length = 2474 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||||||||||||| ||||||| Sbjct: 14 tgctgccgctcctgctgctgctgc 37
>ref|XM_590876.2| PREDICTED: Bos taurus similar to GDNF family receptor alpha 3 preproprotein (LOC540009), mRNA Length = 1392 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 cgctcctgctcctgctgccg 215 |||||||||||||||||||| Sbjct: 38 cgctcctgctcctgctgccg 57
>gb|DQ172909.1| Morone saxatilis cyclic nucleotide-gated channel beta cone (CNGB3) mRNA, complete cds Length = 2265 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 306 tgctgctgctcctgctcctgctgc 329
>gb|AY101765.1| Homo sapiens C3 and PZP-like alpha-2-macroglobulin domain containing 8 (CPAMD8) mRNA, complete cds Length = 5852 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 tgctgccgctcctgctcctgctgc 213 |||| ||||||||||||||||||| Sbjct: 43 tgctcccgctcctgctcctgctgc 66
>gb|AC165278.4| Mus musculus chromosome 15, clone RP23-250O18, complete sequence Length = 187758 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 136591 tgctgctgctcctgctcctgctgc 136568 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 136327 tgctgctgctcctgctcctgctgc 136304 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 136081 tgctgctgctcctgctcctgctgc 136058 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 135904 tgctgctgctcctgctcctgctgc 135881 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 135627 tgctgctgctcctgctcctgctgc 135604 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 135483 tgctgctgctcctgctcctgctgc 135460 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 135330 tgctgctgctcctgctcctgctgc 135307 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 135085 tgctgctgctcctgctcctgctgc 135062
>gb|AY368235.2| Burkholderia cepacia phage Bcep43, complete genome Length = 48024 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 ctgcgaacgcgcgcgcgtgcgcct 103 |||||| ||||||||||||||||| Sbjct: 39045 ctgcgatcgcgcgcgcgtgcgcct 39022
>gb|AF543311.2| Burkholderia cepacia phage Bcep781, complete genome Length = 48247 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 ctgcgaacgcgcgcgcgtgcgcct 103 |||||| ||||||||||||||||| Sbjct: 39332 ctgcgatcgcgcgcgcgtgcgcct 39309
>ref|NM_015692.1| Homo sapiens C3 and PZP-like, alpha-2-macroglobulin domain containing 8 (CPAMD8), mRNA Length = 5852 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 tgctgccgctcctgctcctgctgc 213 |||| ||||||||||||||||||| Sbjct: 43 tgctcccgctcctgctcctgctgc 66
>gb|AC152166.4| Mus musculus BAC clone RP23-425A3 from chromosome 7, complete sequence Length = 216652 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 131 cccctcgcttcccttcctctcctt 154 |||||| ||||||||||||||||| Sbjct: 114709 cccctcccttcccttcctctcctt 114686
>gb|AC124978.19| Mus musculus chromosome 5, clone RP24-107D19, complete sequence Length = 182405 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 107723 tgctgctgctcctgctcctgctgc 107746
>ref|XM_923056.2| PREDICTED: Mus musculus hypothetical LOC638145 (LOC638145), mRNA Length = 1050 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 104 tgctgctgctcctgctcctgctgc 81 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 74 tgctgctgctcctgctcctgctgc 51
>ref|XM_544115.2| PREDICTED: Canis familiaris similar to Extracellular sulfatase Sulf-1 precursor (HSulf-1) (LOC486986), mRNA Length = 3909 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 cccacggccccgaggactcg 189 |||||||||||||||||||| Sbjct: 1214 cccacggccccgaggactcg 1233
>ref|XM_973057.1| PREDICTED: Mus musculus hypothetical protein LOC669103 (LOC669103), mRNA Length = 471 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 143 tgctgctgctcctgctcctgctgc 120
>ref|XM_973504.1| PREDICTED: Mus musculus hypothetical protein LOC664943 (LOC664943), mRNA Length = 471 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 143 tgctgctgctcctgctcctgctgc 120
>ref|XM_975074.1| PREDICTED: Mus musculus hypothetical protein LOC674490 (LOC674490), mRNA Length = 471 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 143 tgctgctgctcctgctcctgctgc 120
>gb|BT011430.1| Drosophila melanogaster RH70434 full insert cDNA Length = 5156 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 tgctgccgctcctgctcctgctgc 213 |||| ||||||||||||||||||| Sbjct: 394 tgctcccgctcctgctcctgctgc 371
>ref|XM_847761.1| PREDICTED: Canis familiaris hypothetical protein LOC610293 (LOC610293), mRNA Length = 1207 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 ctgccggggcctccctcccc 229 |||||||||||||||||||| Sbjct: 865 ctgccggggcctccctcccc 884
>ref|XM_532410.2| PREDICTED: Canis familiaris similar to Amphiregulin precursor (AR) (Colorectum cell-derived growth factor) (CRDGF) (LOC475176), mRNA Length = 1219 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 gtgctgccgctcctgctcct 208 |||||||||||||||||||| Sbjct: 111 gtgctgccgctcctgctcct 130
>ref|XM_863672.1| PREDICTED: Canis familiaris hypothetical protein LOC612617 (LOC612617), mRNA Length = 1404 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 263 tgctgctgctcctgctcctgctgc 240
>gb|AC132685.3| Mus musculus BAC clone RP23-278G24 from chromosome 7, complete sequence Length = 188989 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 185240 tgctgctgctcctgctcctgctgc 185263
>emb|CR956377.9| Pig DNA sequence from clone PigE-220E19 on chromosome 7, complete sequence Length = 222390 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 ccttcctctccttcctgccc 161 |||||||||||||||||||| Sbjct: 168966 ccttcctctccttcctgccc 168947
>gb|AC127332.3| Mus musculus BAC clone RP23-136I1 from 5, complete sequence Length = 230629 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 219907 tgctgctgctcctgctcctgctgc 219884
>gb|AC006333.3| Homo sapiens BAC clone RP11-390E23 from 7, complete sequence Length = 187532 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 ttcagcaccaccacctccac 410 |||||||||||||||||||| Sbjct: 127665 ttcagcaccaccacctccac 127646
>gb|AC060834.8| Homo sapiens BAC clone RP11-671K16 from 7, complete sequence Length = 113686 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 tgctgccgctcctgctcctgctgc 213 |||| ||||||||||||||||||| Sbjct: 41616 tgctcccgctcctgctcctgctgc 41639
>emb|CR668358.2|CNS0FEOC Tetraodon nigroviridis full-length cDNA Length = 608 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 467 tgctgctgctcctgctcctgctgc 444
>emb|CR659037.2|CNS0F7HF Tetraodon nigroviridis full-length cDNA Length = 643 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 466 tgctgctgctcctgctcctgctgc 443
>gb|AC143357.1| Pan troglodytes BAC clone RP43-171L24 from 7, complete sequence Length = 181482 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 ttcagcaccaccacctccac 410 |||||||||||||||||||| Sbjct: 17030 ttcagcaccaccacctccac 17011
>emb|AL109800.25|HSDA64P14 Human DNA sequence from clone RP6-64P14 on chromosome Xq24-25, complete sequence Length = 163764 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 gctcccttccctttccctcc 29 |||||||||||||||||||| Sbjct: 142046 gctcccttccctttccctcc 142027
>emb|AL022336.1|HS78F24 Human DNA sequence from clone RP1-78F24 on chromosome 22q12.1-12.3, complete sequence Length = 145414 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 cggcctccgtgcgctccttc 393 |||||||||||||||||||| Sbjct: 29918 cggcctccgtgcgctccttc 29899
>gb|AC123540.3| Oryctolagus cuniculus clone LB1-151A4, complete sequence Length = 187337 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 gtgctgccgctcctgctcctgctg 212 ||||||||||||||||||| |||| Sbjct: 179121 gtgctgccgctcctgctcccgctg 179144
>gb|BC067854.1| Homo sapiens C3 and PZP-like, alpha-2-macroglobulin domain containing 8, mRNA (cDNA clone IMAGE:30339671), complete cds Length = 2137 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 tgctgccgctcctgctcctgctgc 213 |||| ||||||||||||||||||| Sbjct: 199 tgctcccgctcctgctcctgctgc 222
>emb|AL731853.9| Mouse DNA sequence from clone RP23-128G5 on chromosome 11 Contains the 5' end of the Osbp2 gene for oxysterol binding protein 2, a novel pseudogene, two novel genes, the Dusp18 gene for dual specificity phosphatase 18 and five CpG islands, complete sequence Length = 205509 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 cggcctccgtgcgctccttc 393 |||||||||||||||||||| Sbjct: 53009 cggcctccgtgcgctccttc 52990
>emb|AJ439398.1|AGA439398 Anopheles gambiae BAC clone 22J3 Length = 95527 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 aggcgggggacgacgacgac 342 |||||||||||||||||||| Sbjct: 93247 aggcgggggacgacgacgac 93266
>gb|AC023683.4| Drosophila melanogaster X BAC RP98-29G2 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160194 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 tgctgccgctcctgctcctgctgc 213 |||| ||||||||||||||||||| Sbjct: 39283 tgctcccgctcctgctcctgctgc 39260
>gb|AC023723.4| Drosophila melanogaster X BAC RP98-48E6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179363 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 tgctgccgctcctgctcctgctgc 213 |||| ||||||||||||||||||| Sbjct: 179142 tgctcccgctcctgctcctgctgc 179119
>ref|NM_012756.1| Rattus norvegicus insulin-like growth factor 2 receptor (Igf2r), mRNA Length = 8810 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||||||||||||| ||||||| Sbjct: 136 tgctgccgctcctgctgctgctgc 159
>ref|NM_167230.1| Drosophila melanogaster CG32683-RA (CG32683), mRNA Length = 5143 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 tgctgccgctcctgctcctgctgc 213 |||| ||||||||||||||||||| Sbjct: 392 tgctcccgctcctgctcctgctgc 369
>dbj|AK148374.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370118A15 product:eukaryotic translation initiation factor 4E binding protein 2, full insert sequence Length = 4719 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||||||| ||||||||||||| Sbjct: 17 tgctgccgctgctgctcctgctgc 40
>ref|XM_374401.4| PREDICTED: Homo sapiens similar to C3 and PZP-like, alpha-2-macroglobulin domain containing 8 (LOC392631), mRNA Length = 2196 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 tgctgccgctcctgctcctgctgc 213 |||| ||||||||||||||||||| Sbjct: 26 tgctcccgctcctgctcctgctgc 49
>ref|XM_936714.1| PREDICTED: Homo sapiens similar to C3 and PZP-like, alpha-2-macroglobulin domain containing 8 (LOC340268), mRNA Length = 2196 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 tgctgccgctcctgctcctgctgc 213 |||| ||||||||||||||||||| Sbjct: 26 tgctcccgctcctgctcctgctgc 49
>ref|XM_294634.6| PREDICTED: Homo sapiens similar to C3 and PZP-like, alpha-2-macroglobulin domain containing 8 (LOC340268), mRNA Length = 2196 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 tgctgccgctcctgctcctgctgc 213 |||| ||||||||||||||||||| Sbjct: 26 tgctcccgctcctgctcctgctgc 49
>gb|DP000006.1| Oryctolagus cuniculus target 1 genomic scaffold Length = 1889755 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 gtgctgccgctcctgctcctgctg 212 ||||||||||||||||||| |||| Sbjct: 1422097 gtgctgccgctcctgctcccgctg 1422120
>gb|AC020908.7| Homo sapiens chromosome 19 clone CTD-2528A14, complete sequence Length = 174034 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 tgctgccgctcctgctcctgctgc 213 |||| ||||||||||||||||||| Sbjct: 97637 tgctcccgctcctgctcctgctgc 97614
>dbj|AK013560.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:2900019J01 product:hypothetical Serine-rich region profile containing protein, full insert sequence Length = 987 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 332 tgctgctgctcctgctcctgctgc 309
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 cttcccttcctctccttcct 157 |||||||||||||||||||| Sbjct: 5295944 cttcccttcctctccttcct 5295925
>gb|AC153626.5| Mus musculus 6 BAC RP23-245J24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190365 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 cttcccttcctctccttcct 157 |||||||||||||||||||| Sbjct: 148409 cttcccttcctctccttcct 148428
>gb|AF288742.1|AF288742 Homo sapiens oxysterol binding protein 2 (OSBP2) gene, complete cds Length = 217292 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 cggcctccgtgcgctccttc 393 |||||||||||||||||||| Sbjct: 131123 cggcctccgtgcgctccttc 131142
>gb|AC157101.9| Mus musculus 6 BAC RP24-549J13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 167974 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 cttcccttcctctccttcct 157 |||||||||||||||||||| Sbjct: 155807 cttcccttcctctccttcct 155788
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 cttcccttcctctccttcct 157 |||||||||||||||||||| Sbjct: 18531331 cttcccttcctctccttcct 18531312 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 cttcccttcctctccttcct 157 |||||||||||||||||||| Sbjct: 16358568 cttcccttcctctccttcct 16358549
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 10584793 tgctgctgctcctgctcctgctgc 10584816
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 cttcccttcctctccttcct 157 |||||||||||||||||||| Sbjct: 17771552 cttcccttcctctccttcct 17771533
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cccctcgtcgccggccgccg 245 |||||||||||||||||||| Sbjct: 9457635 cccctcgtcgccggccgccg 9457654
>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold Length = 1888123 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 ccttcctctccttcctgccc 161 |||||||||||||||||||| Sbjct: 156074 ccttcctctccttcctgccc 156055
>gb|AC127223.5| Mus musculus BAC clone RP24-484M18 from chromosome 7, complete sequence Length = 168323 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 34626 tgctgctgctcctgctcctgctgc 34649
>gb|AC106870.4| Homo sapiens BAC clone RP11-223F18 from 2, complete sequence Length = 143441 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 129693 tgctgctgctcctgctcctgctgc 129670
>gb|AF435605.1| Plasmodium vivax isolate TE26 merozoite surface protein 1 (MSP1) gene, complete cds Length = 5258 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 3892 tgctgctgctcctgctcctgctgc 3869
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 gccatgtcggcctccgtgcg 386 |||||||||||||||||||| Sbjct: 2083299 gccatgtcggcctccgtgcg 2083318
>dbj|AP003538.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0059O19 Length = 144386 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cccctcgtcgccggccgccg 245 |||||||||||||||||||| Sbjct: 45257 cccctcgtcgccggccgccg 45276
>dbj|AP003849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1753_E03 Length = 126734 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 cttcccttcctctccttcct 157 |||||||||||||||||||| Sbjct: 76305 cttcccttcctctccttcct 76286
>emb|BX324176.11| Mouse DNA sequence from clone RP23-136N12 on chromosome X, complete sequence Length = 81593 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 26002 tgctgctgctcctgctcctgctgc 26025
>dbj|AP004158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_F05 Length = 134247 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 12433 tgctgctgctcctgctcctgctgc 12456
>dbj|AP004130.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1014_B05 Length = 121853 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 104261 tgctgctgctcctgctcctgctgc 104284
>dbj|AK110294.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-G09, full insert sequence Length = 2930 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cgaacgcgcgcgcgtgcgcc 102 |||||||||||||||||||| Sbjct: 1299 cgaacgcgcgcgcgtgcgcc 1318
>gb|AC122197.4| Mus musculus BAC clone RP23-55A6 from 10, complete sequence Length = 232763 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||||||| ||||||||||||| Sbjct: 30618 tgctgccgctgctgctcctgctgc 30641
>gb|AE003450.4| Drosophila melanogaster chromosome X, section 34 of 74 of the complete sequence Length = 232514 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 tgctgccgctcctgctcctgctgc 213 |||| ||||||||||||||||||| Sbjct: 198017 tgctcccgctcctgctcctgctgc 198040
>gb|AC146916.3| Rattus norvegicus strain Brown Norway clone CH230-206L9, complete sequence Length = 215015 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 ccttcctctccttcctgccc 161 |||||||||||||||||||| Sbjct: 156074 ccttcctctccttcctgccc 156055
>dbj|AP003471.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1552D7 Length = 160912 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 cttcccttcctctccttcct 157 |||||||||||||||||||| Sbjct: 62959 cttcccttcctctccttcct 62940
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 cttcccttcctctccttcct 157 |||||||||||||||||||| Sbjct: 18457557 cttcccttcctctccttcct 18457538 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 cttcccttcctctccttcct 157 |||||||||||||||||||| Sbjct: 16311801 cttcccttcctctccttcct 16311782
>emb|AL935067.2|CNS08CCJ Oryza sativa chromosome 12, . BAC OSJNBa0072A13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 130954 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 cttcccttcctctccttcct 157 |||||||||||||||||||| Sbjct: 63959 cttcccttcctctccttcct 63978
>emb|AL713907.3|CNS07YQ7 Oryza sativa chromosome 12, . BAC OJ1057_E03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127989 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 cttcccttcctctccttcct 157 |||||||||||||||||||| Sbjct: 93823 cttcccttcctctccttcct 93842
>gb|AF051726.1|MMCATS1 Mus musculus cathepsin S (CatS) gene, promoter region and exons 1 and 2 Length = 5719 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 724 tgctgctgctcctgctcctgctgc 747
>tpe|BN000765.1| TPA: TPA_inf: Canis familiaris mRNA for sulfatase 1 (sulf1 gene) Length = 2610 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 cccacggccccgaggactcg 189 |||||||||||||||||||| Sbjct: 671 cccacggccccgaggactcg 690
>gb|U06937.1|CRU06937 Chlamydomonas reinhardtii 21gr ribosomal protein S14 (CRY1) gene, complete cds Length = 4697 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 cgctcctgctcctgctgccg 215 |||||||||||||||||||| Sbjct: 1949 cgctcctgctcctgctgccg 1930
>gb|U59809.1|RNU59809 Rattus norvegicus mannose 6-phosphate/insulin-like growth factor II receptor (M6P/IGF2r) mRNA, complete cds Length = 8810 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||||||||||||| ||||||| Sbjct: 136 tgctgccgctcctgctgctgctgc 159
>emb|AL683814.10| Mouse DNA sequence from clone RP23-165L23 on chromosome 2, complete sequence Length = 191052 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 ctcccttccctttccctccg 30 |||||||||||||||||||| Sbjct: 175396 ctcccttccctttccctccg 175377
>emb|AL683811.6| Mouse DNA sequence from clone RP23-291K22 on chromosome 4, complete sequence Length = 171213 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 cttcccttcctctccttcct 157 |||||||||||||||||||| Sbjct: 166596 cttcccttcctctccttcct 166615
>emb|AL807824.10| Mouse DNA sequence from clone RP23-37J21 on chromosome 11, complete sequence Length = 178597 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 152122 tgctgctgctcctgctcctgctgc 152145 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 151990 tgctgctgctcctgctcctgctgc 152013
>emb|X95931.1|OCCFTR7 O.cuniculus CFTR gene Length = 3516 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 gtgctgccgctcctgctcctgctg 212 ||||||||||||||||||| |||| Sbjct: 1810 gtgctgccgctcctgctcccgctg 1833
>emb|AL732550.9| Mouse DNA sequence from clone RP23-437D21 on chromosome 4, complete sequence Length = 106866 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 gctcccttccctttccctcc 29 |||||||||||||||||||| Sbjct: 12071 gctcccttccctttccctcc 12052
>gb|AC155715.24| Mus musculus 10 BAC RP24-118H2 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 174860 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 cttcccttcctctccttcct 157 |||||||||||||||||||| Sbjct: 19489 cttcccttcctctccttcct 19508
>gb|L13174.1|BABAIV Baboon apolipoprotein A-VI mRNA, 3' end Length = 1365 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 tgctgccgctcctgctcctgctgc 213 |||||| ||||||||||||||||| Sbjct: 1112 tgctgctgctcctgctcctgctgc 1089
>dbj|AB033109.1| Homo sapiens mRNA for KIAA1283 protein, partial cds Length = 5817 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 tgctgccgctcctgctcctgctgc 213 |||| ||||||||||||||||||| Sbjct: 24 tgctcccgctcctgctcctgctgc 47
>dbj|AB022787.1| Xenopus laevis Xksy mRNA for tyrosine kinase, complete cds Length = 3782 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 gccgctcctgctcctgctgc 213 |||||||||||||||||||| Sbjct: 133 gccgctcctgctcctgctgc 114 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,957,617 Number of Sequences: 3902068 Number of extensions: 3957617 Number of successful extensions: 139703 Number of sequences better than 10.0: 143 Number of HSP's better than 10.0 without gapping: 143 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 137831 Number of HSP's gapped (non-prelim): 1872 length of query: 466 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 444 effective length of database: 17,147,199,772 effective search space: 7613356698768 effective search space used: 7613356698768 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)