ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast52c06 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X99608.1|OSSMT3 O.sativa mRNA for SMT3 protein Length = 303 Score = 276 bits (139), Expect = 6e-71 Identities = 237/269 (88%), Gaps = 3/269 (1%) Strand = Plus / Plus Query: 132 gaggacaagaagcccgcgggcg---acggcggaggcgcccacatcaacctcaaggtcaag 188 |||||||||||||| ||||| | | ||||| ||||||||||||||||||||||||||| Sbjct: 19 gaggacaagaagccggcggggggagagggcggcggcgcccacatcaacctcaaggtcaag 78 Query: 189 gggcaggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctg 248 || |||||||| || ||||| |||||||||||||||||||| || ||||| ||||||||| Sbjct: 79 ggacaggatgggaacgaggtattcttccgcatcaagagatctacgcagctgaagaagctg 138 Query: 249 atgaatgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgat 308 ||||| ||||| |||||||| |||||||||||| | ||| | ||||| ||||| |||||| Sbjct: 139 atgaacgcctattgtgaccgtcagtctgtggatatgaatgctattgcattcctatttgat 198 Query: 309 ggtcgtaggctccgtggtgagcagacccccgacgagcttgagatggaagaaggcgatgag 368 ||||||||||||||||| ||||||||||| |||||||| ||||||||||| || || ||| Sbjct: 199 ggtcgtaggctccgtggcgagcagacccctgacgagctcgagatggaagacggggacgag 258 Query: 369 attgatgccatgctgcaccagactggagg 397 || || |||||||| |||||||||||||| Sbjct: 259 atcgacgccatgctccaccagactggagg 287
>dbj|AK058869.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-C03, full insert sequence Length = 642 Score = 276 bits (139), Expect = 6e-71 Identities = 237/269 (88%), Gaps = 3/269 (1%) Strand = Plus / Plus Query: 132 gaggacaagaagcccgcgggcg---acggcggaggcgcccacatcaacctcaaggtcaag 188 |||||||||||||| ||||| | | ||||| ||||||||||||||||||||||||||| Sbjct: 121 gaggacaagaagccggcggggggagagggcggcggcgcccacatcaacctcaaggtcaag 180 Query: 189 gggcaggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctg 248 || |||||||| || ||||| |||||||||||||||||||| || ||||| ||||||||| Sbjct: 181 ggacaggatgggaacgaggtattcttccgcatcaagagatctacgcagctgaagaagctg 240 Query: 249 atgaatgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgat 308 ||||| ||||| |||||||| |||||||||||| | ||| | ||||| ||||| |||||| Sbjct: 241 atgaacgcctattgtgaccgtcagtctgtggatatgaatgctattgcattcctatttgat 300 Query: 309 ggtcgtaggctccgtggtgagcagacccccgacgagcttgagatggaagaaggcgatgag 368 ||||||||||||||||| ||||||||||| |||||||| ||||||||||| || || ||| Sbjct: 301 ggtcgtaggctccgtggcgagcagacccctgacgagctcgagatggaagacggggacgag 360 Query: 369 attgatgccatgctgcaccagactggagg 397 || || |||||||| |||||||||||||| Sbjct: 361 atcgacgccatgctccaccagactggagg 389
>dbj|AB016030.1| Oryza sativa (japonica cultivar-group) SUMO-1 mRNA for ubiquitin-related protein, complete cds Length = 569 Score = 276 bits (139), Expect = 6e-71 Identities = 237/269 (88%), Gaps = 3/269 (1%) Strand = Plus / Plus Query: 132 gaggacaagaagcccgcgggcg---acggcggaggcgcccacatcaacctcaaggtcaag 188 |||||||||||||| ||||| | | ||||| ||||||||||||||||||||||||||| Sbjct: 98 gaggacaagaagccggcggggggagagggcggcggcgcccacatcaacctcaaggtcaag 157 Query: 189 gggcaggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctg 248 || |||||||| || ||||| |||||||||||||||||||| || ||||| ||||||||| Sbjct: 158 ggacaggatgggaacgaggtattcttccgcatcaagagatctacgcagctgaagaagctg 217 Query: 249 atgaatgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgat 308 ||||| ||||| |||||||| |||||||||||| | ||| | ||||| ||||| |||||| Sbjct: 218 atgaacgcctattgtgaccgtcagtctgtggatatgaatgctattgcattcctatttgat 277 Query: 309 ggtcgtaggctccgtggtgagcagacccccgacgagcttgagatggaagaaggcgatgag 368 ||||||||||||||||| ||||||||||| |||||||| ||||||||||| || || ||| Sbjct: 278 ggtcgtaggctccgtggcgagcagacccctgacgagctcgagatggaagacggggacgag 337 Query: 369 attgatgccatgctgcaccagactggagg 397 || || |||||||| |||||||||||||| Sbjct: 338 atcgacgccatgctccaccagactggagg 366
>ref|NM_189962.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 306 Score = 252 bits (127), Expect = 9e-64 Identities = 211/239 (88%) Strand = Plus / Plus Query: 156 ggcggaggcgcccacatcaacctcaaggtcaaggggcaggatggcaatgaggttttcttc 215 ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 49 ggcggcggcgcccacatcaacctcaaggtcaagggacaggatggcaacgaggtgttcttt 108 Query: 216 cgcatcaagagatccacacagctcaagaagctgatgaatgcctactgtgaccgccagtct 275 || ||||||||||| || || || |||||||||||||| ||||||||||| |||||||| Sbjct: 109 cgtatcaagagatcaacccaactgaagaagctgatgaacgcctactgtgatcgccagtcc 168 Query: 276 gtggatctcaattccattgcgttcctttttgatggtcgtaggctccgtggtgagcagacc 335 |||||| |||| || ||||| ||||| |||||||||||||||||| || |||||||||| Sbjct: 169 gtggatatcaaatctattgccttcctgtttgatggtcgtaggctcaatgctgagcagacc 228 Query: 336 cccgacgagcttgagatggaagaaggcgatgagattgatgccatgctgcaccagactgg 394 || ||| |||| ||||||||||| ||||| |||||||| |||||||| ||||||||||| Sbjct: 229 cctgaccagctcgagatggaagacggcgacgagattgacgccatgcttcaccagactgg 287
>dbj|AK103092.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118J24, full insert sequence Length = 626 Score = 252 bits (127), Expect = 9e-64 Identities = 211/239 (88%) Strand = Plus / Plus Query: 156 ggcggaggcgcccacatcaacctcaaggtcaaggggcaggatggcaatgaggttttcttc 215 ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 169 ggcggcggcgcccacatcaacctcaaggtcaagggacaggatggcaacgaggtgttcttt 228 Query: 216 cgcatcaagagatccacacagctcaagaagctgatgaatgcctactgtgaccgccagtct 275 || ||||||||||| || || || |||||||||||||| ||||||||||| |||||||| Sbjct: 229 cgtatcaagagatcaacccaactgaagaagctgatgaacgcctactgtgatcgccagtcc 288 Query: 276 gtggatctcaattccattgcgttcctttttgatggtcgtaggctccgtggtgagcagacc 335 |||||| |||| || ||||| ||||| |||||||||||||||||| || |||||||||| Sbjct: 289 gtggatatcaaatctattgccttcctgtttgatggtcgtaggctcaatgctgagcagacc 348 Query: 336 cccgacgagcttgagatggaagaaggcgatgagattgatgccatgctgcaccagactgg 394 || ||| |||| ||||||||||| ||||| |||||||| |||||||| ||||||||||| Sbjct: 349 cctgaccagctcgagatggaagacggcgacgagattgacgccatgcttcaccagactgg 407
>dbj|AK062434.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-A02, full insert sequence Length = 627 Score = 252 bits (127), Expect = 9e-64 Identities = 211/239 (88%) Strand = Plus / Plus Query: 156 ggcggaggcgcccacatcaacctcaaggtcaaggggcaggatggcaatgaggttttcttc 215 ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 146 ggcggcggcgcccacatcaacctcaaggtcaagggacaggatggcaacgaggtgttcttt 205 Query: 216 cgcatcaagagatccacacagctcaagaagctgatgaatgcctactgtgaccgccagtct 275 || ||||||||||| || || || |||||||||||||| ||||||||||| |||||||| Sbjct: 206 cgtatcaagagatcaacccaactgaagaagctgatgaacgcctactgtgatcgccagtcc 265 Query: 276 gtggatctcaattccattgcgttcctttttgatggtcgtaggctccgtggtgagcagacc 335 |||||| |||| || ||||| ||||| |||||||||||||||||| || |||||||||| Sbjct: 266 gtggatatcaaatctattgccttcctgtttgatggtcgtaggctcaatgctgagcagacc 325 Query: 336 cccgacgagcttgagatggaagaaggcgatgagattgatgccatgctgcaccagactgg 394 || ||| |||| ||||||||||| ||||| |||||||| |||||||| ||||||||||| Sbjct: 326 cctgaccagctcgagatggaagacggcgacgagattgacgccatgcttcaccagactgg 384
>ref|NM_189963.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 366 Score = 226 bits (114), Expect = 5e-56 Identities = 191/216 (88%), Gaps = 3/216 (1%) Strand = Plus / Plus Query: 132 gaggacaagaagcccgcgggcg---acggcggaggcgcccacatcaacctcaaggtcaag 188 |||||||||||||| ||||| | | ||||| ||||||||||||||||||||||||||| Sbjct: 19 gaggacaagaagccggcggggggagagggcggcggcgcccacatcaacctcaaggtcaag 78 Query: 189 gggcaggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctg 248 || |||||||| || ||||| |||||||||||||||||||| || ||||| ||||||||| Sbjct: 79 ggacaggatgggaacgaggtattcttccgcatcaagagatctacgcagctgaagaagctg 138 Query: 249 atgaatgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgat 308 ||||| ||||| |||||||| |||||||||||| | ||| | ||||| ||||| |||||| Sbjct: 139 atgaacgcctattgtgaccgtcagtctgtggatatgaatgctattgcattcctatttgat 198 Query: 309 ggtcgtaggctccgtggtgagcagacccccgacgag 344 ||||||||||||||||| ||||||||||| |||||| Sbjct: 199 ggtcgtaggctccgtggcgagcagacccctgacgag 234 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 343 agcttgagatggaagaaggcgatgagattgatgccatgctgcaccagactggagg 397 |||| ||||||||||| || || ||||| || |||||||| |||||||||||||| Sbjct: 296 agctcgagatggaagacggggacgagatcgacgccatgctccaccagactggagg 350
>gb|AY103962.1| Zea mays PCO135487 mRNA sequence Length = 781 Score = 214 bits (108), Expect = 2e-52 Identities = 204/236 (86%) Strand = Plus / Plus Query: 162 ggcgcccacatcaacctcaaggtcaaggggcaggatggcaatgaggttttcttccgcatc 221 ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||| ||||| Sbjct: 109 ggcgcccacatcaaccttaaggtcaagggacaggatggcaatgaggtgttctttcgcata 168 Query: 222 aagagatccacacagctcaagaagctgatgaatgcctactgtgaccgccagtctgtggat 281 ||||| ||||| ||||| |||||||||||||| ||||| || ||||||||||||||||| Sbjct: 169 aagaggtccacccagctgaagaagctgatgaacgcctattgcgaccgccagtctgtggac 228 Query: 282 ctcaattccattgcgttcctttttgatggtcgtaggctccgtggtgagcagacccccgac 341 | ||| ||||||| ||||| |||||||| || ||||| || || ||||||||||| || Sbjct: 229 atgaatgccattgcattcctgtttgatggccgcaggcttcgcggcgagcagacccctgat 288 Query: 342 gagcttgagatggaagaaggcgatgagattgatgccatgctgcaccagactggagg 397 ||||| |||||||| || ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 289 gagctggagatggaggacggcgacgagatcgacgccatgcttcaccagaccggagg 344
>emb|X99609.1|ATSMT3 A.thaliana mRNA for SMT3 protein Length = 315 Score = 168 bits (85), Expect = 1e-38 Identities = 199/237 (83%) Strand = Plus / Plus Query: 158 cggaggcgcccacatcaacctcaaggtcaaggggcaggatggcaatgaggttttcttccg 217 |||||| || |||||||| ||||| |||||||| |||||||| || ||||||||||| | Sbjct: 39 cggaggagctcacatcaatctcaaagtcaagggacaggatggaaacgaggttttctttag 98 Query: 218 catcaagagatccacacagctcaagaagctgatgaatgcctactgtgaccgccagtctgt 277 ||||||||| ||| ||||||||||||||||||||||| ||||||||||| || ||||| Sbjct: 99 gatcaagagaagcactcagctcaagaagctgatgaatgcttactgtgaccggcaatctgt 158 Query: 278 ggatctcaattccattgcgttcctttttgatggtcgtaggctccgtggtgagcagacccc 337 ||| | || |||||||| ||| | |||||||| ||| | || |||| |||||| || || Sbjct: 159 ggacatgaactccattgctttcttgtttgatgggcgtcgtcttcgtgctgagcaaactcc 218 Query: 338 cgacgagcttgagatggaagaaggcgatgagattgatgccatgctgcaccagactgg 394 ||| |||||||| |||||||| || |||||||| ||||| ||||| || |||||||| Sbjct: 219 cgatgagcttgacatggaagatggagatgagatcgatgcaatgcttcatcagactgg 275
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 167 bits (84), Expect = 4e-38 Identities = 135/152 (88%) Strand = Plus / Minus Query: 193 aggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatga 252 ||||||| || ||||| |||||||||||||||||||| || ||||| ||||||||||||| Sbjct: 40058222 aggatgggaacgaggtattcttccgcatcaagagatctacgcagctgaagaagctgatga 40058163 Query: 253 atgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggtc 312 | ||||| |||||||| |||||||||||| | ||| | ||||| ||||| |||||||||| Sbjct: 40058162 acgcctattgtgaccgtcagtctgtggatatgaatgctattgcattcctatttgatggtc 40058103 Query: 313 gtaggctccgtggtgagcagacccccgacgag 344 ||||||||||||| ||||||||||| |||||| Sbjct: 40058102 gtaggctccgtggcgagcagacccctgacgag 40058071 Score = 137 bits (69), Expect = 4e-29 Identities = 126/145 (86%) Strand = Plus / Minus Query: 193 aggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatga 252 |||||||||| ||||| ||||| || ||||||||||| || || || ||||||||||||| Sbjct: 40055442 aggatggcaacgaggtgttctttcgtatcaagagatcaacccaactgaagaagctgatga 40055383 Query: 253 atgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggtc 312 | ||||||||||| |||||||| |||||| |||| || ||||| ||||| |||||||||| Sbjct: 40055382 acgcctactgtgatcgccagtccgtggatatcaaatctattgccttcctgtttgatggtc 40055323 Query: 313 gtaggctccgtggtgagcagacccc 337 |||||||| || |||||||||||| Sbjct: 40055322 gtaggctcaatgctgagcagacccc 40055298 Score = 65.9 bits (33), Expect = 1e-07 Identities = 59/67 (88%), Gaps = 3/67 (4%) Strand = Plus / Minus Query: 132 gaggacaagaagcccgcgggcg---acggcggaggcgcccacatcaacctcaaggtcaag 188 |||||||||||||| ||||| | | ||||| ||||||||||||||||||||||||||| Sbjct: 40059514 gaggacaagaagccggcggggggagagggcggcggcgcccacatcaacctcaaggtcaag 40059455 Query: 189 gggcagg 195 || |||| Sbjct: 40059454 ggacagg 40059448 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 156 ggcggaggcgcccacatcaacctcaaggtcaaggggcagg 195 ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 40056734 ggcggcggcgcccacatcaacctcaaggtcaagggacagg 40056695 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 343 agcttgagatggaagaaggcgatgagattgatgccatgctgcaccagactgg 394 |||| ||||||||||| ||||| |||||||| |||||||| ||||||||||| Sbjct: 40055176 agctcgagatggaagacggcgacgagattgacgccatgcttcaccagactgg 40055125 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 343 agcttgagatggaagaaggcgatgagattgatgccatgctgcaccagactggagg 397 |||| ||||||||||| || || ||||| || |||||||| |||||||||||||| Sbjct: 40057974 agctcgagatggaagacggggacgagatcgacgccatgctccaccagactggagg 40057920
>dbj|AP003451.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0413C03 Length = 162161 Score = 167 bits (84), Expect = 4e-38 Identities = 135/152 (88%) Strand = Plus / Minus Query: 193 aggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatga 252 ||||||| || ||||| |||||||||||||||||||| || ||||| ||||||||||||| Sbjct: 149673 aggatgggaacgaggtattcttccgcatcaagagatctacgcagctgaagaagctgatga 149614 Query: 253 atgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggtc 312 | ||||| |||||||| |||||||||||| | ||| | ||||| ||||| |||||||||| Sbjct: 149613 acgcctattgtgaccgtcagtctgtggatatgaatgctattgcattcctatttgatggtc 149554 Query: 313 gtaggctccgtggtgagcagacccccgacgag 344 ||||||||||||| ||||||||||| |||||| Sbjct: 149553 gtaggctccgtggcgagcagacccctgacgag 149522 Score = 137 bits (69), Expect = 4e-29 Identities = 126/145 (86%) Strand = Plus / Minus Query: 193 aggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatga 252 |||||||||| ||||| ||||| || ||||||||||| || || || ||||||||||||| Sbjct: 146893 aggatggcaacgaggtgttctttcgtatcaagagatcaacccaactgaagaagctgatga 146834 Query: 253 atgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggtc 312 | ||||||||||| |||||||| |||||| |||| || ||||| ||||| |||||||||| Sbjct: 146833 acgcctactgtgatcgccagtccgtggatatcaaatctattgccttcctgtttgatggtc 146774 Query: 313 gtaggctccgtggtgagcagacccc 337 |||||||| || |||||||||||| Sbjct: 146773 gtaggctcaatgctgagcagacccc 146749 Score = 65.9 bits (33), Expect = 1e-07 Identities = 59/67 (88%), Gaps = 3/67 (4%) Strand = Plus / Minus Query: 132 gaggacaagaagcccgcgggcg---acggcggaggcgcccacatcaacctcaaggtcaag 188 |||||||||||||| ||||| | | ||||| ||||||||||||||||||||||||||| Sbjct: 150965 gaggacaagaagccggcggggggagagggcggcggcgcccacatcaacctcaaggtcaag 150906 Query: 189 gggcagg 195 || |||| Sbjct: 150905 ggacagg 150899 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 156 ggcggaggcgcccacatcaacctcaaggtcaaggggcagg 195 ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 148185 ggcggcggcgcccacatcaacctcaaggtcaagggacagg 148146 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 343 agcttgagatggaagaaggcgatgagattgatgccatgctgcaccagactgg 394 |||| ||||||||||| ||||| |||||||| |||||||| ||||||||||| Sbjct: 146627 agctcgagatggaagacggcgacgagattgacgccatgcttcaccagactgg 146576 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 343 agcttgagatggaagaaggcgatgagattgatgccatgctgcaccagactggagg 397 |||| ||||||||||| || || ||||| || |||||||| |||||||||||||| Sbjct: 149425 agctcgagatggaagacggggacgagatcgacgccatgctccaccagactggagg 149371
>dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0678F11 Length = 154292 Score = 167 bits (84), Expect = 4e-38 Identities = 135/152 (88%) Strand = Plus / Minus Query: 193 aggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatga 252 ||||||| || ||||| |||||||||||||||||||| || ||||| ||||||||||||| Sbjct: 1306 aggatgggaacgaggtattcttccgcatcaagagatctacgcagctgaagaagctgatga 1247 Query: 253 atgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggtc 312 | ||||| |||||||| |||||||||||| | ||| | ||||| ||||| |||||||||| Sbjct: 1246 acgcctattgtgaccgtcagtctgtggatatgaatgctattgcattcctatttgatggtc 1187 Query: 313 gtaggctccgtggtgagcagacccccgacgag 344 ||||||||||||| ||||||||||| |||||| Sbjct: 1186 gtaggctccgtggcgagcagacccctgacgag 1155 Score = 65.9 bits (33), Expect = 1e-07 Identities = 59/67 (88%), Gaps = 3/67 (4%) Strand = Plus / Minus Query: 132 gaggacaagaagcccgcgggcg---acggcggaggcgcccacatcaacctcaaggtcaag 188 |||||||||||||| ||||| | | ||||| ||||||||||||||||||||||||||| Sbjct: 2598 gaggacaagaagccggcggggggagagggcggcggcgcccacatcaacctcaaggtcaag 2539 Query: 189 gggcagg 195 || |||| Sbjct: 2538 ggacagg 2532 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 343 agcttgagatggaagaaggcgatgagattgatgccatgctgcaccagactggagg 397 |||| ||||||||||| || || ||||| || |||||||| |||||||||||||| Sbjct: 1058 agctcgagatggaagacggggacgagatcgacgccatgctccaccagactggagg 1004
>dbj|AK069668.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026B05, full insert sequence Length = 1969 Score = 167 bits (84), Expect = 4e-38 Identities = 135/152 (88%) Strand = Plus / Plus Query: 193 aggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatga 252 ||||||| || ||||| |||||||||||||||||||| || ||||| ||||||||||||| Sbjct: 1414 aggatgggaacgaggtattcttccgcatcaagagatctacgcagctgaagaagctgatga 1473 Query: 253 atgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggtc 312 | ||||| |||||||| |||||||||||| | ||| | ||||| ||||| |||||||||| Sbjct: 1474 acgcctattgtgaccgtcagtctgtggatatgaatgctattgcattcctatttgatggtc 1533 Query: 313 gtaggctccgtggtgagcagacccccgacgag 344 ||||||||||||| ||||||||||| |||||| Sbjct: 1534 gtaggctccgtggcgagcagacccctgacgag 1565 Score = 65.9 bits (33), Expect = 1e-07 Identities = 59/67 (88%), Gaps = 3/67 (4%) Strand = Plus / Plus Query: 132 gaggacaagaagcccgcgggcg---acggcggaggcgcccacatcaacctcaaggtcaag 188 |||||||||||||| ||||| | | ||||| ||||||||||||||||||||||||||| Sbjct: 122 gaggacaagaagccggcggggggagagggcggcggcgcccacatcaacctcaaggtcaag 181 Query: 189 gggcagg 195 || |||| Sbjct: 182 ggacagg 188 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 343 agcttgagatggaagaaggcgatgagattgatgccatgctgcaccagactggagg 397 |||| ||||||||||| || || ||||| || |||||||| |||||||||||||| Sbjct: 1662 agctcgagatggaagacggggacgagatcgacgccatgctccaccagactggagg 1716
>ref|NM_118818.2| Arabidopsis thaliana SUM1 (SMALL UBIQUITIN-LIKE MODIFIER 1) AT4G26840 (SUM1) mRNA, complete cds Length = 710 Score = 161 bits (81), Expect = 3e-36 Identities = 198/237 (83%) Strand = Plus / Plus Query: 158 cggaggcgcccacatcaacctcaaggtcaaggggcaggatggcaatgaggttttcttccg 217 |||||| || |||||||| ||||| |||||||| |||||||| || ||||||||||| | Sbjct: 177 cggaggagctcacatcaatctcaaagtcaagggacaggatggaaacgaggttttctttag 236 Query: 218 catcaagagatccacacagctcaagaagctgatgaatgcctactgtgaccgccagtctgt 277 ||||||||| ||| ||||||||||||||||||||||| ||||||||||| || ||||| Sbjct: 237 gatcaagagaagcactcagctcaagaagctgatgaatgcttactgtgaccggcaatctgt 296 Query: 278 ggatctcaattccattgcgttcctttttgatggtcgtaggctccgtggtgagcagacccc 337 ||| | || |||||||| ||| | |||||||| ||| | || |||| |||||| || || Sbjct: 297 ggacatgaactccattgctttcttgtttgatgggcgtcgtcttcgtgctgagcaaactcc 356 Query: 338 cgacgagcttgagatggaagaaggcgatgagattgatgccatgctgcaccagactgg 394 ||| |||||||| ||||| || || |||||||| ||||| ||||| || |||||||| Sbjct: 357 cgatgagcttgacatggaggatggtgatgagatcgatgcgatgctccatcagactgg 413
>gb|BT008437.1| Arabidopsis thaliana At4g26840 gene, complete cds Length = 303 Score = 161 bits (81), Expect = 3e-36 Identities = 198/237 (83%) Strand = Plus / Plus Query: 158 cggaggcgcccacatcaacctcaaggtcaaggggcaggatggcaatgaggttttcttccg 217 |||||| || |||||||| ||||| |||||||| |||||||| || ||||||||||| | Sbjct: 39 cggaggagctcacatcaatctcaaagtcaagggacaggatggaaacgaggttttctttag 98 Query: 218 catcaagagatccacacagctcaagaagctgatgaatgcctactgtgaccgccagtctgt 277 ||||||||| ||| ||||||||||||||||||||||| ||||||||||| || ||||| Sbjct: 99 gatcaagagaagcactcagctcaagaagctgatgaatgcttactgtgaccggcaatctgt 158 Query: 278 ggatctcaattccattgcgttcctttttgatggtcgtaggctccgtggtgagcagacccc 337 ||| | || |||||||| ||| | |||||||| ||| | || |||| |||||| || || Sbjct: 159 ggacatgaactccattgctttcttgtttgatgggcgtcgtcttcgtgctgagcaaactcc 218 Query: 338 cgacgagcttgagatggaagaaggcgatgagattgatgccatgctgcaccagactgg 394 ||| |||||||| ||||| || || |||||||| ||||| ||||| || |||||||| Sbjct: 219 cgatgagcttgacatggaggatggtgatgagatcgatgcgatgctccatcagactgg 275
>gb|AY072368.1| Arabidopsis thaliana ubiquitin-like protein (At4g26840) mRNA, complete cds Length = 584 Score = 161 bits (81), Expect = 3e-36 Identities = 198/237 (83%) Strand = Plus / Plus Query: 158 cggaggcgcccacatcaacctcaaggtcaaggggcaggatggcaatgaggttttcttccg 217 |||||| || |||||||| ||||| |||||||| |||||||| || ||||||||||| | Sbjct: 103 cggaggagctcacatcaatctcaaagtcaagggacaggatggaaacgaggttttctttag 162 Query: 218 catcaagagatccacacagctcaagaagctgatgaatgcctactgtgaccgccagtctgt 277 ||||||||| ||| ||||||||||||||||||||||| ||||||||||| || ||||| Sbjct: 163 gatcaagagaagcactcagctcaagaagctgatgaatgcttactgtgaccggcaatctgt 222 Query: 278 ggatctcaattccattgcgttcctttttgatggtcgtaggctccgtggtgagcagacccc 337 ||| | || |||||||| ||| | |||||||| ||| | || |||| |||||| || || Sbjct: 223 ggacatgaactccattgctttcttgtttgatgggcgtcgtcttcgtgctgagcaaactcc 282 Query: 338 cgacgagcttgagatggaagaaggcgatgagattgatgccatgctgcaccagactgg 394 ||| |||||||| ||||| || || |||||||| ||||| ||||| || |||||||| Sbjct: 283 cgatgagcttgacatggaggatggtgatgagatcgatgcgatgctccatcagactgg 339
>emb|BX828793.1|CNS0A2L0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL39ZA02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 599 Score = 161 bits (81), Expect = 3e-36 Identities = 198/237 (83%) Strand = Plus / Plus Query: 158 cggaggcgcccacatcaacctcaaggtcaaggggcaggatggcaatgaggttttcttccg 217 |||||| || |||||||| ||||| |||||||| |||||||| || ||||||||||| | Sbjct: 112 cggaggagctcacatcaatctcaaagtcaagggacaggatggaaacgaggttttctttag 171 Query: 218 catcaagagatccacacagctcaagaagctgatgaatgcctactgtgaccgccagtctgt 277 ||||||||| ||| ||||||||||||||||||||||| ||||||||||| || ||||| Sbjct: 172 gatcaagagaagcactcagctcaagaagctgatgaatgcttactgtgaccggcaatctgt 231 Query: 278 ggatctcaattccattgcgttcctttttgatggtcgtaggctccgtggtgagcagacccc 337 ||| | || |||||||| ||| | |||||||| ||| | || |||| |||||| || || Sbjct: 232 ggacatgaactccattgctttcttgtttgatgggcgtcgtcttcgtgctgagcaaactcc 291 Query: 338 cgacgagcttgagatggaagaaggcgatgagattgatgccatgctgcaccagactgg 394 ||| |||||||| ||||| || || |||||||| ||||| ||||| || |||||||| Sbjct: 292 cgatgagcttgacatggaggatggtgatgagatcgatgcgatgctccatcagactgg 348
>gb|AF510519.1| Arabidopsis thaliana small ubiquitin-like modifier 1 (SUMO) mRNA, complete cds Length = 619 Score = 161 bits (81), Expect = 3e-36 Identities = 198/237 (83%) Strand = Plus / Plus Query: 158 cggaggcgcccacatcaacctcaaggtcaaggggcaggatggcaatgaggttttcttccg 217 |||||| || |||||||| ||||| |||||||| |||||||| || ||||||||||| | Sbjct: 139 cggaggagctcacatcaatctcaaagtcaagggacaggatggaaacgaggttttctttag 198 Query: 218 catcaagagatccacacagctcaagaagctgatgaatgcctactgtgaccgccagtctgt 277 ||||||||| ||| ||||||||||||||||||||||| ||||||||||| || ||||| Sbjct: 199 gatcaagagaagcactcagctcaagaagctgatgaatgcttactgtgaccggcaatctgt 258 Query: 278 ggatctcaattccattgcgttcctttttgatggtcgtaggctccgtggtgagcagacccc 337 ||| | || |||||||| ||| | |||||||| ||| | || |||| |||||| || || Sbjct: 259 ggacatgaactccattgctttcttgtttgatgggcgtcgtcttcgtgctgagcaaactcc 318 Query: 338 cgacgagcttgagatggaagaaggcgatgagattgatgccatgctgcaccagactgg 394 ||| |||||||| ||||| || || |||||||| ||||| ||||| || |||||||| Sbjct: 319 cgatgagcttgacatggaggatggtgatgagatcgatgcgatgctccatcagactgg 375
>gb|AY086914.1| Arabidopsis thaliana clone 29414 mRNA, complete sequence Length = 710 Score = 161 bits (81), Expect = 3e-36 Identities = 198/237 (83%) Strand = Plus / Plus Query: 158 cggaggcgcccacatcaacctcaaggtcaaggggcaggatggcaatgaggttttcttccg 217 |||||| || |||||||| ||||| |||||||| |||||||| || ||||||||||| | Sbjct: 177 cggaggagctcacatcaatctcaaagtcaagggacaggatggaaacgaggttttctttag 236 Query: 218 catcaagagatccacacagctcaagaagctgatgaatgcctactgtgaccgccagtctgt 277 ||||||||| ||| ||||||||||||||||||||||| ||||||||||| || ||||| Sbjct: 237 gatcaagagaagcactcagctcaagaagctgatgaatgcttactgtgaccggcaatctgt 296 Query: 278 ggatctcaattccattgcgttcctttttgatggtcgtaggctccgtggtgagcagacccc 337 ||| | || |||||||| ||| | |||||||| ||| | || |||| |||||| || || Sbjct: 297 ggacatgaactccattgctttcttgtttgatgggcgtcgtcttcgtgctgagcaaactcc 356 Query: 338 cgacgagcttgagatggaagaaggcgatgagattgatgccatgctgcaccagactgg 394 ||| |||||||| ||||| || || |||||||| ||||| ||||| || |||||||| Sbjct: 357 cgatgagcttgacatggaggatggtgatgagatcgatgcgatgctccatcagactgg 413
>ref|NM_124898.2| Arabidopsis thaliana SUM2 (SMALL UBIQUITIN-LIKE MODIFIER 2) AT5G55160 (SUM2) mRNA, complete cds Length = 643 Score = 157 bits (79), Expect = 4e-35 Identities = 190/227 (83%) Strand = Plus / Plus Query: 168 cacatcaacctcaaggtcaaggggcaggatggcaatgaggttttcttccgcatcaagaga 227 |||||||| ||||| |||||||| |||||||| ||||| || ||||| | ||||||||| Sbjct: 199 cacatcaatctcaaagtcaagggacaggatggtaatgaagtcttctttaggatcaagaga 258 Query: 228 tccacacagctcaagaagctgatgaatgcctactgtgaccgccagtctgtggatctcaat 287 ||| |||||||| || ||||||||||| ||||||||||| |||||||||||| |||| Sbjct: 259 agcactcagctcaaaaaactgatgaatgcttactgtgaccgtcagtctgtggatttcaac 318 Query: 288 tccattgcgttcctttttgatggtcgtaggctccgtggtgagcagacccccgacgagctt 347 || ||||| ||| | |||||||||||| | || |||| |||||||| || || |||||| Sbjct: 319 tcaattgctttcttgtttgatggtcgtcgtcttcgtgccgagcagactccagatgagctt 378 Query: 348 gagatggaagaaggcgatgagattgatgccatgctgcaccagactgg 394 || |||||||| || |||||||| ||||| ||||| || |||||||| Sbjct: 379 gaaatggaagatggagatgagatcgatgcaatgcttcatcagactgg 425
>gb|AY113019.1| Arabidopsis thaliana AT5g55160/MCO15_11 mRNA, complete cds Length = 312 Score = 157 bits (79), Expect = 4e-35 Identities = 190/227 (83%) Strand = Plus / Plus Query: 168 cacatcaacctcaaggtcaaggggcaggatggcaatgaggttttcttccgcatcaagaga 227 |||||||| ||||| |||||||| |||||||| ||||| || ||||| | ||||||||| Sbjct: 46 cacatcaatctcaaagtcaagggacaggatggtaatgaagtcttctttaggatcaagaga 105 Query: 228 tccacacagctcaagaagctgatgaatgcctactgtgaccgccagtctgtggatctcaat 287 ||| |||||||| || ||||||||||| ||||||||||| |||||||||||| |||| Sbjct: 106 agcactcagctcaaaaaactgatgaatgcttactgtgaccgtcagtctgtggatttcaac 165 Query: 288 tccattgcgttcctttttgatggtcgtaggctccgtggtgagcagacccccgacgagctt 347 || ||||| ||| | |||||||||||| | || |||| |||||||| || || |||||| Sbjct: 166 tcaattgctttcttgtttgatggtcgtcgtcttcgtgccgagcagactccagatgagctt 225 Query: 348 gagatggaagaaggcgatgagattgatgccatgctgcaccagactgg 394 || |||||||| || |||||||| ||||| ||||| || |||||||| Sbjct: 226 gaaatggaagatggagatgagatcgatgcaatgcttcatcagactgg 272
>gb|AY075614.1| Arabidopsis thaliana AT5g55160/MCO15_11 mRNA, complete cds Length = 600 Score = 157 bits (79), Expect = 4e-35 Identities = 190/227 (83%) Strand = Plus / Plus Query: 168 cacatcaacctcaaggtcaaggggcaggatggcaatgaggttttcttccgcatcaagaga 227 |||||||| ||||| |||||||| |||||||| ||||| || ||||| | ||||||||| Sbjct: 156 cacatcaatctcaaagtcaagggacaggatggtaatgaagtcttctttaggatcaagaga 215 Query: 228 tccacacagctcaagaagctgatgaatgcctactgtgaccgccagtctgtggatctcaat 287 ||| |||||||| || ||||||||||| ||||||||||| |||||||||||| |||| Sbjct: 216 agcactcagctcaaaaaactgatgaatgcttactgtgaccgtcagtctgtggatttcaac 275 Query: 288 tccattgcgttcctttttgatggtcgtaggctccgtggtgagcagacccccgacgagctt 347 || ||||| ||| | |||||||||||| | || |||| |||||||| || || |||||| Sbjct: 276 tcaattgctttcttgtttgatggtcgtcgtcttcgtgccgagcagactccagatgagctt 335 Query: 348 gagatggaagaaggcgatgagattgatgccatgctgcaccagactgg 394 || |||||||| || |||||||| ||||| ||||| || |||||||| Sbjct: 336 gaaatggaagatggagatgagatcgatgcaatgcttcatcagactgg 382
>gb|AF510520.1| Arabidopsis thaliana small ubiquitin-like modifier 2 (SUMO) mRNA, complete cds Length = 584 Score = 157 bits (79), Expect = 4e-35 Identities = 190/227 (83%) Strand = Plus / Plus Query: 168 cacatcaacctcaaggtcaaggggcaggatggcaatgaggttttcttccgcatcaagaga 227 |||||||| ||||| |||||||| |||||||| ||||| || ||||| | ||||||||| Sbjct: 140 cacatcaatctcaaagtcaagggacaggatggtaatgaagtcttctttaggatcaagaga 199 Query: 228 tccacacagctcaagaagctgatgaatgcctactgtgaccgccagtctgtggatctcaat 287 ||| |||||||| || ||||||||||| ||||||||||| |||||||||||| |||| Sbjct: 200 agcactcagctcaaaaaactgatgaatgcttactgtgaccgtcagtctgtggatttcaac 259 Query: 288 tccattgcgttcctttttgatggtcgtaggctccgtggtgagcagacccccgacgagctt 347 || ||||| ||| | |||||||||||| | || |||| |||||||| || || |||||| Sbjct: 260 tcaattgctttcttgtttgatggtcgtcgtcttcgtgccgagcagactccagatgagctt 319 Query: 348 gagatggaagaaggcgatgagattgatgccatgctgcaccagactgg 394 || |||||||| || |||||||| ||||| ||||| || |||||||| Sbjct: 320 gaaatggaagatggagatgagatcgatgcaatgcttcatcagactgg 366
>gb|AY085191.1| Arabidopsis thaliana clone 13697 mRNA, complete sequence Length = 643 Score = 149 bits (75), Expect = 1e-32 Identities = 189/227 (83%) Strand = Plus / Plus Query: 168 cacatcaacctcaaggtcaaggggcaggatggcaatgaggttttcttccgcatcaagaga 227 |||||||| ||||| |||||||| |||||||| ||||| || ||||| | ||||||||| Sbjct: 199 cacatcaatctcaaagtcaagggacaggatggtaatgaagtcttctttaggatcaagaga 258 Query: 228 tccacacagctcaagaagctgatgaatgcctactgtgaccgccagtctgtggatctcaat 287 ||| |||||||| || ||||||||||| ||||||||||| || ||||||||| |||| Sbjct: 259 agcactcagctcaaaaaactgatgaatgcttactgtgaccgtcaatctgtggatttcaac 318 Query: 288 tccattgcgttcctttttgatggtcgtaggctccgtggtgagcagacccccgacgagctt 347 || ||||| ||| | |||||||||||| | || |||| |||||||| || || |||||| Sbjct: 319 tcaattgctttcttgtttgatggtcgtcgtcttcgtgccgagcagactccagatgagctt 378 Query: 348 gagatggaagaaggcgatgagattgatgccatgctgcaccagactgg 394 || |||||||| || |||||||| ||||| ||||| || |||||||| Sbjct: 379 gaaatggaagatggagatgagatcgatgcaatgcttcatcagactgg 425
>gb|AF451278.1| Phaseolus vulgaris ubiquitin-like protein SMT3 (SMT3) mRNA, partial cds Length = 449 Score = 117 bits (59), Expect = 3e-23 Identities = 185/227 (81%) Strand = Plus / Plus Query: 168 cacatcaacctcaaggtcaaggggcaggatggcaatgaggttttcttccgcatcaagaga 227 ||||||||||| || ||||||||||||||||| |||||||| |||||| | ||||||||| Sbjct: 30 cacatcaaccttaaagtcaaggggcaggatgggaatgaggtgttcttcaggatcaagaga 89 Query: 228 tccacacagctcaagaagctgatgaatgcctactgtgaccgccagtctgtggatctcaat 287 ||| || | || ||||| |||||||| || |||||||| ||||| || ||| |||| Sbjct: 90 agcacccaattgaaaaagcttatgaatgcttattgtgaccgacagtcagttgatttcaac 149 Query: 288 tccattgcgttcctttttgatggtcgtaggctccgtggtgagcagacccccgacgagctt 347 ||||| || || || |||||||| ||| | || |||| ||||||||| || || ||| | Sbjct: 150 tccatcgcttttctctttgatggacgtcgccttcgtgctgagcagactcctgatgagttg 209 Query: 348 gagatggaagaaggcgatgagattgatgccatgctgcaccagactgg 394 || ||||| || || ||||| |||||||||||||| || |||||||| Sbjct: 210 gaaatggaggatggtgatgaaattgatgccatgcttcatcagactgg 256
>emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 66 Length = 198372 Score = 95.6 bits (48), Expect = 1e-16 Identities = 123/148 (83%) Strand = Plus / Plus Query: 193 aggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatga 252 ||||||| || ||||||||||| | ||||||||| ||| ||||||||||||||||||| Sbjct: 2003 aggatggaaacgaggttttctttaggatcaagagaagcactcagctcaagaagctgatga 2062 Query: 253 atgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggtc 312 |||| ||||||||||| || |||||||| | || |||||||| ||| | |||||||| | Sbjct: 2063 atgcttactgtgaccggcaatctgtggacatgaactccattgctttcttgtttgatgggc 2122 Query: 313 gtaggctccgtggtgagcagacccccga 340 || | || |||| |||||| || ||||| Sbjct: 2123 gtcgtcttcgtgctgagcaaactcccga 2150
>emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 65 Length = 198320 Score = 95.6 bits (48), Expect = 1e-16 Identities = 123/148 (83%) Strand = Plus / Plus Query: 193 aggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatga 252 ||||||| || ||||||||||| | ||||||||| ||| ||||||||||||||||||| Sbjct: 195323 aggatggaaacgaggttttctttaggatcaagagaagcactcagctcaagaagctgatga 195382 Query: 253 atgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggtc 312 |||| ||||||||||| || |||||||| | || |||||||| ||| | |||||||| | Sbjct: 195383 atgcttactgtgaccggcaatctgtggacatgaactccattgctttcttgtttgatgggc 195442 Query: 313 gtaggctccgtggtgagcagacccccga 340 || | || |||| |||||| || ||||| Sbjct: 195443 gtcgtcttcgtgctgagcaaactcccga 195470
>emb|AL035440.2|ATF10M23 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M23 (ESSA project) Length = 128574 Score = 95.6 bits (48), Expect = 1e-16 Identities = 123/148 (83%) Strand = Plus / Plus Query: 193 aggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatga 252 ||||||| || ||||||||||| | ||||||||| ||| ||||||||||||||||||| Sbjct: 46160 aggatggaaacgaggttttctttaggatcaagagaagcactcagctcaagaagctgatga 46219 Query: 253 atgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggtc 312 |||| ||||||||||| || |||||||| | || |||||||| ||| | |||||||| | Sbjct: 46220 atgcttactgtgaccggcaatctgtggacatgaactccattgctttcttgtttgatgggc 46279 Query: 313 gtaggctccgtggtgagcagacccccga 340 || | || |||| |||||| || ||||| Sbjct: 46280 gtcgtcttcgtgctgagcaaactcccga 46307
>dbj|AB010071.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCO15 Length = 82918 Score = 91.7 bits (46), Expect = 2e-15 Identities = 103/122 (84%) Strand = Plus / Minus Query: 193 aggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaagctgatga 252 ||||||| ||||| || ||||| | ||||||||| ||| |||||||| || ||||||| Sbjct: 42797 aggatggtaatgaagtcttctttaggatcaagagaagcactcagctcaaaaaactgatga 42738 Query: 253 atgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctttttgatggtc 312 |||| ||||||||||| |||||||||||| |||| || ||||| ||| | |||||||||| Sbjct: 42737 atgcttactgtgaccgtcagtctgtggatttcaactcaattgctttcttgtttgatggtc 42678 Query: 313 gt 314 || Sbjct: 42677 gt 42676
>emb|AJ864397.1| Cannabis sativa partial mRNA for ubiquitin-like protein SMT3 (smt3 gene) Length = 283 Score = 79.8 bits (40), Expect = 7e-12 Identities = 169/212 (79%) Strand = Plus / Plus Query: 186 aaggggcaggatggcaatgaggttttcttccgcatcaagagatccacacagctcaagaag 245 ||||| |||||||||||||| || || ||| | ||||| ||| || || || || ||| Sbjct: 5 aagggccaggatggcaatgaagtatttttcaggatcaaaagaagtacccaactgaaaaag 64 Query: 246 ctgatgaatgcctactgtgaccgccagtctgtggatctcaattccattgcgttccttttt 305 || |||||||| || ||||| || || |||||||| |||| || || || || | ||| Sbjct: 65 cttatgaatgcatattgtgatcgacaatctgtggagttcaactctatagcatttttattt 124 Query: 306 gatggtcgtaggctccgtggtgagcagacccccgacgagcttgagatggaagaaggcgat 365 ||||||||| | || || | ||||||||| ||||||||||| || ||||| || || ||| Sbjct: 125 gatggtcgtcgccttcgagctgagcagactcccgacgagctggaaatggaggacggtgat 184 Query: 366 gagattgatgccatgctgcaccagactggagg 397 ||||||||||| ||||| ||||| |||||||| Sbjct: 185 gagattgatgctatgcttcaccaaactggagg 216
>emb|AJ001901.1|CARNAUP Cicer arietinum mRNA for Ubiquitin protein Length = 552 Score = 69.9 bits (35), Expect = 7e-09 Identities = 167/211 (79%) Strand = Plus / Plus Query: 183 gtcaaggggcaggatggcaatgaggttttcttccgcatcaagagatccacacagctcaag 242 ||||| || |||||||| ||||| || ||||| | || |||||| ||| || || ||| Sbjct: 97 gtcaaaggacaggatggaaatgaagtattctttaggataaagagaaacactcaactgaag 156 Query: 243 aagctgatgaatgcctactgtgaccgccagtctgtggatctcaattccattgcgttcctt 302 |||||||||||||| || ||||| || || |||||||| | ||||| ||||| || | Sbjct: 157 aagctgatgaatgcatattgtgatcgacaatctgtggacttgaattcaattgccttttta 216 Query: 303 tttgatggtcgtaggctccgtggtgagcagacccccgacgagcttgagatggaagaaggc 362 ||||||||||| || ||||||| || ||||| || || ||||| || ||||| || || Sbjct: 217 tttgatggtcgcagactccgtgcagaacagacacctgatgagctagacatggaggatgga 276 Query: 363 gatgagattgatgccatgctgcaccagactg 393 |||||||| ||||| ||| ||||||| |||| Sbjct: 277 gatgagatcgatgcaatgttgcaccaaactg 307
>gb|AY817504.1| Schistosoma mansoni small ubiquitin modifier 2 mRNA, complete cds Length = 742 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 171 atcaacctcaaggtcaaggggcaggatggcaatgaggt 208 ||||| |||||||||||||| |||||||||| |||||| Sbjct: 369 atcaatctcaaggtcaagggccaggatggcagtgaggt 406
>gb|AC132615.5| Mus musculus BAC clone RP23-301J15 from 9, complete sequence Length = 201718 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcctgctc 38 |||||||||||||| ||||||||||||| Sbjct: 168608 tcttcttcttcttctcctgctcctgctc 168581
>emb|AL808116.6| Mouse DNA sequence from clone RP23-97H1 on chromosome X, complete sequence Length = 200519 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcctgctc 38 |||||||||||||| ||||||||||||| Sbjct: 122512 tcttcttcttcttctcctgctcctgctc 122485
>gb|AC168266.2| Mus musculus BAC clone RP24-245G1 from chromosome 9, complete sequence Length = 188778 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcctgctc 38 |||||||||||||| ||||||||||||| Sbjct: 104366 tcttcttcttcttctcctgctcctgctc 104393
>ref|NM_119536.3| Arabidopsis thaliana unknown protein AT4G33780 mRNA, complete cds Length = 979 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 354 gaagaaggcgatgagattgatgc 376 ||||||||||||||||||||||| Sbjct: 59 gaagaaggcgatgagattgatgc 37
>emb|AL161584.2|ATCHRIV80 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 80 Length = 192861 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 354 gaagaaggcgatgagattgatgc 376 ||||||||||||||||||||||| Sbjct: 37136 gaagaaggcgatgagattgatgc 37158
>emb|AL031394.1|ATT16L1 Arabidopsis thaliana DNA chromosome 4, BAC clone T16L1 (ESSAII project) Length = 98124 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 354 gaagaaggcgatgagattgatgc 376 ||||||||||||||||||||||| Sbjct: 84354 gaagaaggcgatgagattgatgc 84376
>gb|AY086625.1| Arabidopsis thaliana clone 263734 mRNA, complete sequence Length = 964 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 354 gaagaaggcgatgagattgatgc 376 ||||||||||||||||||||||| Sbjct: 59 gaagaaggcgatgagattgatgc 37
>gb|BT001936.1| Arabidopsis thaliana clone C105400 unknown protein (At4g33780) mRNA, complete cds Length = 643 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 354 gaagaaggcgatgagattgatgc 376 ||||||||||||||||||||||| Sbjct: 35 gaagaaggcgatgagattgatgc 13
>dbj|AP006636.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT47I16, TM0208a, complete sequence Length = 32967 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcctgct 37 ||||||||||||||||||||| ||||| Sbjct: 18384 tcttcttcttcttcccctgctgctgct 18410
>ref|XM_429194.1| PREDICTED: Gallus gallus similar to Potassium channel, subfamily V, member 2 (LOC431642), mRNA Length = 2352 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 187 aggggcaggatggcaatgaggt 208 |||||||||||||||||||||| Sbjct: 1679 aggggcaggatggcaatgaggt 1658
>gb|U46669.2| Caenorhabditis elegans cosmid C41G11, complete sequence Length = 29288 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 12 cttcttcttcttcccctgctcctgct 37 ||||||||||||| |||||||||||| Sbjct: 11573 cttcttcttcttctcctgctcctgct 11548
>emb|BX828962.1|CNS0A3EP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL55ZB08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 700 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 354 gaagaaggcgatgagattgatg 375 |||||||||||||||||||||| Sbjct: 22 gaagaaggcgatgagattgatg 1
>ref|NM_202585.2| Arabidopsis thaliana unknown protein AT3G14850 transcript variant AT3G14850.2 mRNA, complete cds Length = 1171 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgct 31 ||||||||||||||||||||| Sbjct: 78 tcttcttcttcttcccctgct 98
>gb|AC150393.2| Branchiostoma floridae clone CH302-13E12, complete sequence Length = 207808 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 175 acctcaaggtcaaggggcagg 195 ||||||||||||||||||||| Sbjct: 79381 acctcaaggtcaaggggcagg 79401
>gb|AC087546.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0012D19, complete sequence Length = 153276 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tcctcggcggcgcggcacagc 92 ||||||||||||||||||||| Sbjct: 75973 tcctcggcggcgcggcacagc 75993
>gb|AF153420.1| Brassica juncea Pusa Jaikisan plastidic delta-9-stearoyl-acyl-acyl carrier protein desaturase (fab2) gene, complete cds; nuclear gene for plastid product Length = 2023 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 cttcttcttcttcccctgctc 32 ||||||||||||||||||||| Sbjct: 104 cttcttcttcttcccctgctc 124
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 363 gatgagattgatgccatgctg 383 ||||||||||||||||||||| Sbjct: 1583624 gatgagattgatgccatgctg 1583644
>gb|AF230696.1| Brassica rapa cultivar R500 stearoyl-ACP desaturase (DELTA9-BR-3) gene, partial cds Length = 594 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 cttcttcttcttcccctgctc 32 ||||||||||||||||||||| Sbjct: 63 cttcttcttcttcccctgctc 83
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tcctcggcggcgcggcacagc 92 ||||||||||||||||||||| Sbjct: 15017354 tcctcggcggcgcggcacagc 15017374
>emb|BX826284.1|CNS0A54D Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL9ZF08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1085 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgct 31 ||||||||||||||||||||| Sbjct: 49 tcttcttcttcttcccctgct 69
>dbj|AP002061.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: T21E2 Length = 47466 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgct 31 ||||||||||||||||||||| Sbjct: 39172 tcttcttcttcttcccctgct 39192
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 tcagctcctcggcggcgcggc 87 ||||||||||||||||||||| Sbjct: 903831 tcagctcctcggcggcgcggc 903811
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 tcctcggcggcgcggcacagc 92 ||||||||||||||||||||| Sbjct: 15025595 tcctcggcggcgcggcacagc 15025615
>gb|AC166114.5| Mus musculus BAC clone RP23-63J20 from chromosome 16, complete sequence Length = 207146 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 7565 tcttcttcttcttccccttctcct 7588
>ref|NM_001030993.1| Gallus gallus programmed cell death 6 interacting protein (PDCD6IP), mRNA Length = 5224 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 agctcctcggcggcgcggca 88 |||||||||||||||||||| Sbjct: 265 agctcctcggcggcgcggca 246
>gb|AC121510.10| Mus musculus chromosome 19, clone RP24-371N19, complete sequence Length = 168677 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 132443 tcttcttcttcttcccctcctcct 132420
>gb|AC137853.21| Mus musculus chromosome 19, clone RP24-276L14, complete sequence Length = 173430 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 144048 tcttcttcttcttcccctcctcct 144071
>gb|AC133871.13| Mus musculus chromosome 1, clone RP24-414I11, complete sequence Length = 203423 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 73445 tcttcttcttcttccccttctcct 73422
>gb|AC123694.11| Mus musculus chromosome 10, clone RP23-326O5, complete sequence Length = 214111 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 66005 tcttcttcttcttccccttctcct 66028
>gb|AY674244.1| Ixodes pacificus clone IP_7_60_92_99_CLU 40S ribosomal protein S30 mRNA, complete cds Length = 402 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 agtcttcttcttcttcccctgctc 32 |||||||||||||||| ||||||| Sbjct: 303 agtcttcttcttcttctcctgctc 280
>gb|AC098157.8| Rattus norvegicus X BAC CH230-75N19 (Children's Hospital Oakland Research Institute) complete sequence Length = 233894 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 120964 tcttcttcttcttcccctcctcct 120941
>gb|AC119218.7| Mus musculus chromosome 7, clone RP24-200I20, complete sequence Length = 171061 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 actcgagtcttcttcttcttcccc 27 ||||||||||| |||||||||||| Sbjct: 42196 actcgagtcttgttcttcttcccc 42173
>gb|AC140187.3| Mus musculus BAC clone RP24-364N20 from chromosome Y, complete sequence Length = 151358 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 84467 tcttcttcttcttcccctcctcct 84444
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgc 30 |||||||||||||||||||| Sbjct: 21976418 tcttcttcttcttcccctgc 21976437
>gb|AC114645.9| Mus musculus chromosome 9, clone RP24-131G14, complete sequence Length = 214734 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 121270 tcttcttcttcttcccctcctcct 121293
>gb|AC163353.3| Mus musculus BAC clone RP23-55G7 from chromosome 6, complete sequence Length = 264135 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 226200 tcttcttcttcttcccctcctcct 226223
>gb|AC148980.6| Mus musculus BAC clone RP23-230C16 from chromosome 7, complete sequence Length = 192433 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 128429 tcttcttcttcttcccctcctcct 128406
>gb|AC092424.4| Homo sapiens BAC clone RP13-572K6 from 7, complete sequence Length = 82435 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcctgctc 38 |||||||||||||| ||| ||||||||| Sbjct: 60902 tcttcttcttcttctcctcctcctgctc 60875
>gb|AC117690.10| Mus musculus chromosome 16, clone RP23-446I8, complete sequence Length = 189033 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 70235 tcttcttcttcttccccttctcct 70258
>gb|AC096226.12| Rattus norvegicus 18 BAC CH230-26M18 (Children's Hospital Oakland Research Institute) complete sequence Length = 232962 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 82368 tcttcttcttcttcccctcctcct 82345
>gb|AC142267.3| Mus musculus BAC clone RP24-131K10 from chromosome Y, complete sequence Length = 151710 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 146273 tcttcttcttcttcccctcctcct 146250
>ref|XM_986687.1| PREDICTED: Mus musculus hypothetical protein LOC671386 (LOC671386), mRNA Length = 555 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcctgctc 38 |||||||||||||| ||| ||||||||| Sbjct: 223 tcttcttcttcttctcctcctcctgctc 196
>gb|AC139711.4| Mus musculus BAC clone RP23-362F21 from chromosome 19, complete sequence Length = 230596 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 cgagtcttcttcttcttccc 26 |||||||||||||||||||| Sbjct: 125164 cgagtcttcttcttcttccc 125183
>emb|CT009577.5| Mouse DNA sequence from clone RP23-24C24 on chromosome 16, complete sequence Length = 258862 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgc 30 |||||||||||||||||||| Sbjct: 93079 tcttcttcttcttcccctgc 93098
>gb|AC125125.4| Mus musculus BAC clone RP24-274E6 from chromosome 8, complete sequence Length = 180801 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 gatccacacagctcaagaag 245 |||||||||||||||||||| Sbjct: 47872 gatccacacagctcaagaag 47891
>gb|AC130818.3| Mus musculus BAC clone RP23-89F9 from chromosome 8, complete sequence Length = 220285 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 210864 tcttcttcttcttcccctcctcct 210887
>gb|AC130221.4| Mus musculus BAC clone RP23-168E11 from chromosome 5, complete sequence Length = 200384 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 124899 tcttcttcttcttcccctcctcct 124922
>gb|AC122359.5| Mus musculus BAC clone RP23-421B1 from chromosome 6, complete sequence Length = 194338 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||| ||||||||| Sbjct: 171436 tcttcttcttcttctcctgctcct 171413
>emb|Z78062.1|CEF16D3 Caenorhabditis elegans Cosmid F16D3, complete sequence Length = 32591 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcctgctc 38 |||||||||||| | ||||||||||||| Sbjct: 29387 tcttcttcttctgctcctgctcctgctc 29414
>gb|AC126038.4| Mus musculus BAC clone RP24-230C18 from chromosome 8, complete sequence Length = 196490 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 78147 tcttcttcttcttcccctcctcct 78124
>gb|AC124349.4| Mus musculus BAC clone RP24-463G19 from chromosome 12, complete sequence Length = 122944 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||| ||||||||| Sbjct: 39984 tcttcttcttcttctcctgctcct 40007
>gb|AC121829.3| Mus musculus BAC clone RP23-480P21 from chromosome 5, complete sequence Length = 197131 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 153074 tcttcttcttcttccccttctcct 153097
>gb|AC121591.4| Mus musculus BAC clone RP23-289H3 from 1, complete sequence Length = 195393 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcctgctc 38 |||||||||||||| ||| ||||||||| Sbjct: 58837 tcttcttcttcttctcctcctcctgctc 58810
>ref|XM_547104.2| PREDICTED: Canis familiaris similar to THUMP domain containing 1 (LOC489984), mRNA Length = 1077 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 actcgagtcttcttcttctt 23 |||||||||||||||||||| Sbjct: 473 actcgagtcttcttcttctt 454
>gb|AC155171.7| Mus musculus BAC clone RP23-100A10 from chromosome 7, complete sequence Length = 193027 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 170836 tcttcttcttcttcccctcctcct 170859
>gb|AC162307.5| Mus musculus BAC clone RP23-271I2 from chromosome 18, complete sequence Length = 196879 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 185929 tcttcttcttcttcccctcctcct 185906
>emb|AL663120.1| Human DNA sequence from clone RP11-421P17 on chromosome 1, complete sequence Length = 18025 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 7260 tcttcttcttcttcccctcctcct 7283
>emb|AL445586.6| Human DNA sequence from clone RP11-352F21 on chromosome 9, complete sequence Length = 198498 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 tcttcttcccctgctcctgc 36 |||||||||||||||||||| Sbjct: 73623 tcttcttcccctgctcctgc 73604
>ref|XM_795293.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC586325 (LOC586325), mRNA Length = 447 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 137 tcttcttcttcttccccttctcct 114
>emb|AL357127.17| Human DNA sequence from clone RP11-282I1 on chromosome 10 Contains the 3' end of a novel gene and a novel gene, complete sequence Length = 124343 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 cagactggagggtgctttcg 406 |||||||||||||||||||| Sbjct: 4695 cagactggagggtgctttcg 4676
>emb|AL356600.13| Human DNA sequence from clone RP5-974J14 on chromosome 1p31.2-32.1 Contains part of the NEGR1 gene for neuronal growth regulator 1 and part of a novel gene, complete sequence Length = 131457 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 aggatgttgctgcagcctgg 437 |||||||||||||||||||| Sbjct: 37971 aggatgttgctgcagcctgg 37952
>gb|AC069067.17| Homo sapiens 3 BAC RP11-454C18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172213 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 30021 tcttcttcttcttcccctcctcct 30044
>gb|AC158948.3| Mus musculus chromosome 1, clone RP24-263I3, complete sequence Length = 201046 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 88555 tcttcttcttcttccccttctcct 88578
>emb|Z86099.2|HSV2HG52 Herpes simplex virus type 2 (strain HG52), complete genome Length = 154746 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 gtcttcttcttcttcccctgctcc 33 |||||||||||||||| ||||||| Sbjct: 149741 gtcttcttcttcttccgctgctcc 149718 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 gtcttcttcttcttcccctgctcc 33 |||||||||||||||| ||||||| Sbjct: 132001 gtcttcttcttcttccgctgctcc 132024
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 agaagcccgcgggcgacggc 158 |||||||||||||||||||| Sbjct: 2738462 agaagcccgcgggcgacggc 2738481
>emb|AL672030.10| Mouse DNA sequence from clone RP23-199E12 on chromosome 11, complete sequence Length = 78258 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||| ||||||||| Sbjct: 17379 tcttcttcttcttctcctgctcct 17356
>emb|AJ720564.1| Gallus gallus mRNA for hypothetical protein, clone 20e18 Length = 5224 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 agctcctcggcggcgcggca 88 |||||||||||||||||||| Sbjct: 265 agctcctcggcggcgcggca 246
>gb|AC151827.5| Mus musculus BAC clone RP24-453P17 from chromosome y, complete sequence Length = 166980 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 75550 tcttcttcttcttcccctcctcct 75573
>gb|AC012574.7| Homo sapiens chromosome 8, clone RP11-213G6, complete sequence Length = 80586 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 38664 tcttcttcttcttcccctcctcct 38687
>gb|AC093448.19| Mus musculus strain 129Sv/CJ7 clone ct7-304f1, complete sequence Length = 156382 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||| ||||||||| Sbjct: 85533 tcttcttcttcttctcctgctcct 85556
>gb|AC092612.3| Homo sapiens BAC clone RP11-174F8 from 4, complete sequence Length = 145706 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 114669 tcttcttcttcttccccttctcct 114692
>gb|AC097275.2| Homo sapiens chromosome 16 clone RP11-23O7, complete sequence Length = 152018 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 43107 tcttcttcttcttccccttctcct 43084
>gb|AC040166.6| Homo sapiens chromosome 16 clone RP11-44I4, complete sequence Length = 136356 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 78599 tcttcttcttcttccccttctcct 78576
>gb|AC069356.6| Homo sapiens chromosome 18, clone RP11-575O17, complete sequence Length = 161480 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 49062 tcttcttcttcttccccttctcct 49039
>gb|U93037.1|HSELAST4 Homo sapiens elastin gene, exons 5-27 and alternatively spliced products, partial cds Length = 19686 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 ||||||||||||||| |||||||| Sbjct: 16120 tcttcttcttcttcctctgctcct 16143
>gb|AC154373.2| Mus musculus BAC clone RP23-79I18 from chromosome 9, complete sequence Length = 225286 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 50363 tcttcttcttcttcccctcctcct 50340 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 50118 tcttcttcttcttcccctcctcct 50095
>gb|AC127352.5| Mus musculus BAC clone RP23-81P4 from chromosome 7, complete sequence Length = 196031 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 130783 tcttcttcttcttcccctcctcct 130806
>gb|AC159251.2| Mus musculus BAC clone RP24-113B8 from chromosome 12, complete sequence Length = 200896 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||| ||||||||| Sbjct: 146791 tcttcttcttcttctcctgctcct 146814
>gb|AC157652.3| Mus musculus BAC clone RP24-324J2 from chromosome 10, complete sequence Length = 191096 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 128018 tcttcttcttcttcccctcctcct 127995
>gb|AC154736.2| Mus musculus BAC clone RP24-389J14 from chromosome 16, complete sequence Length = 141092 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgc 30 |||||||||||||||||||| Sbjct: 15996 tcttcttcttcttcccctgc 16015
>gb|AC140419.8| Mus musculus BAC clone RP24-435P9 from chromosome 3, complete sequence Length = 157093 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 126307 tcttcttcttcttccccttctcct 126284
>gb|AC115847.19| Mus musculus chromosome 5, clone RP24-245J15, complete sequence Length = 182243 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 54730 tcttcttcttcttcccctcctcct 54707
>gb|AC017016.5|AC017016 Homo sapiens BAC clone RP11-152H13 from 3, complete sequence Length = 180681 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 140194 tcttcttcttcttcccctcctcct 140171
>emb|BX088544.5| Zebrafish DNA sequence from clone DKEY-15K2, complete sequence Length = 153083 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 240 aagaagctgatgaatgcctactgt 263 |||||| ||||||||||||||||| Sbjct: 97590 aagaagatgatgaatgcctactgt 97567
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 agtcttcttcttcttcccct 28 |||||||||||||||||||| Sbjct: 1174823 agtcttcttcttcttcccct 1174804
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgc 30 |||||||||||||||||||| Sbjct: 21969447 tcttcttcttcttcccctgc 21969466
>gb|AC093728.2| Homo sapiens BAC clone RP11-7F8 from 4, complete sequence Length = 114434 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 ||||||||||||||| |||||||| Sbjct: 17484 tcttcttcttcttcctctgctcct 17507
>gb|AC157092.6| Mus musculus 10 BAC RP24-397N4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 141291 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 86218 tcttcttcttcttcccctcctcct 86195
>gb|AC154838.2| Mus musculus BAC clone RP23-64F2 from chromosome 14, complete sequence Length = 224431 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcctgctc 38 |||||||||||||| ||| ||||||||| Sbjct: 37845 tcttcttcttcttctcctcctcctgctc 37872
>gb|AC156024.2| Mus musculus BAC clone RP23-89J1 from chromosome 16, complete sequence Length = 240451 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 1609 tcttcttcttcttccccttctcct 1586
>gb|AC154376.3| Mus musculus BAC clone RP23-71H16 from chromosome 13, complete sequence Length = 169417 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 24432 tcttcttcttcttcccctcctcct 24409
>gb|AC154541.2| Mus musculus BAC clone RP23-458N20 from chromosome 13, complete sequence Length = 174991 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||| ||||||||| Sbjct: 60611 tcttcttcttcttctcctgctcct 60588
>gb|AC069018.17|AC069018 Mus musculus BAC MGS3-563C15 (Genome Systems Mouse BAC Library) complete sequence Length = 157665 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 94951 tcttcttcttcttcccctcctcct 94974
>gb|AC120537.6| Oryza sativa chromosome 3 BAC OSJNBb0042N11 genomic sequence, complete sequence Length = 127210 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgc 30 |||||||||||||||||||| Sbjct: 32598 tcttcttcttcttcccctgc 32579
>gb|AC120860.7| Mus musculus chromosome 1, clone RP23-26I10, complete sequence Length = 188326 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 155692 tcttcttcttcttccccttctcct 155669
>emb|BX678774.7| Mouse DNA sequence from clone RP23-193A4 on chromosome 2, complete sequence Length = 123748 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 116314 tcttcttcttcttcccctcctcct 116291
>emb|AL805965.19| Mouse DNA sequence from clone RP23-193K10 on chromosome 2, complete sequence Length = 205790 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 186345 tcttcttcttcttcccctcctcct 186368
>emb|X00416.1|HERN01 Herpes simplex virus type 2 immediate early(IE) mRNA-3 Length = 1100 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 gtcttcttcttcttcccctgctcc 33 |||||||||||||||| ||||||| Sbjct: 109 gtcttcttcttcttccgctgctcc 132
>gb|AC154828.2| Mus musculus BAC clone RP24-549A19 from 13, complete sequence Length = 138426 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 98831 tcttcttcttcttcccctcctcct 98854
>gb|AC140260.3| Mus musculus BAC clone RP23-311O16 from 6, complete sequence Length = 252791 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 127795 tcttcttcttcttcccctcctcct 127772
>emb|AL604064.10| Zebrafish DNA sequence from clone BUSM1-180G5 in linkage group 3, complete sequence Length = 136041 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 240 aagaagctgatgaatgcctactgt 263 |||||| ||||||||||||||||| Sbjct: 73203 aagaagatgatgaatgcctactgt 73226
>dbj|AK060566.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-A01, full insert sequence Length = 1208 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgc 30 |||||||||||||||||||| Sbjct: 495 tcttcttcttcttcccctgc 476
>gb|AC108832.10| Mus musculus chromosome 7, clone RP23-242J3, complete sequence Length = 185083 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 actcgagtcttcttcttcttcccc 27 ||||||||||| |||||||||||| Sbjct: 167731 actcgagtcttgttcttcttcccc 167708
>gb|AC007461.8|AC007461 Homo sapiens chromosome 17, clone 84_E_24, complete sequence Length = 180385 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 38486 tcttcttcttcttcccctcctcct 38509 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 38183 tcttcttcttcttcccctcctcct 38206
>dbj|AP001357.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-807E13, complete sequence Length = 182382 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 cctgctcctgctcggatccc 45 |||||||||||||||||||| Sbjct: 118379 cctgctcctgctcggatccc 118398
>gb|AC113061.9| Mus musculus chromosome 14, clone RP23-255H22, complete sequence Length = 190623 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 57614 tcttcttcttcttcccctcctcct 57591
>gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence Length = 317137 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 cgcgggcgacggcggaggcgccca 169 ||||||||||||||| |||||||| Sbjct: 138400 cgcgggcgacggcggcggcgccca 138377
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 cagctcctcggcggcgcggc 87 |||||||||||||||||||| Sbjct: 477343 cagctcctcggcggcgcggc 477324
>gb|AC102576.7| Mus musculus chromosome 18, clone RP23-243N2, complete sequence Length = 162186 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 49837 tcttcttcttcttcccctcctcct 49814 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 49519 tcttcttcttcttcccctcctcct 49496
>emb|CT009754.11| Mouse DNA sequence from clone RP23-5P19 on chromosome 13, complete sequence Length = 255133 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 3570 tcttcttcttcttcccctcctcct 3593
>emb|CT030635.8| Mouse DNA sequence from clone RP23-94N7 on chromosome 9, complete sequence Length = 228508 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 74970 tcttcttcttcttcccctcctcct 74993 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 74725 tcttcttcttcttcccctcctcct 74748
>gb|AC164879.2| Mus musculus BAC clone RP23-354H10 from chromosome 14, complete sequence Length = 210602 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 80220 tcttcttcttcttcccctcctcct 80197
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 agtcttcttcttcttcccct 28 |||||||||||||||||||| Sbjct: 1174823 agtcttcttcttcttcccct 1174804
>emb|AL359636.17| Human DNA sequence from clone RP11-542K23 on chromosome 9, complete sequence Length = 193936 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 120513 tcttcttcttcttccccttctcct 120490
>gb|AC167333.3| Mus musculus BAC clone RP23-92L4 from chromosome 5, complete sequence Length = 236596 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 3983 tcttcttcttcttcccctcctcct 3960
>emb|BX000509.2|CNS08CDZ Oryza sativa chromosome 12, . BAC OJ1085_G07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121556 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 agtcttcttcttcttcccct 28 |||||||||||||||||||| Sbjct: 117959 agtcttcttcttcttcccct 117978
>emb|BX000495.1|CNS08CDL Oryza sativa chromosome 12, . BAC OSJNBb0119L20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 126974 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 agtcttcttcttcttcccct 28 |||||||||||||||||||| Sbjct: 113806 agtcttcttcttcttcccct 113787
>gb|AC147247.5| Mus musculus BAC clone RP23-468K14 from 8, complete sequence Length = 184377 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 177409 tcttcttcttcttcccctcctcct 177432
>gb|AC139333.4| Mus musculus BAC clone RP24-83F12 from 3, complete sequence Length = 162197 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 ||||||||||||||| |||||||| Sbjct: 18575 tcttcttcttcttcctctgctcct 18552
>gb|AC131750.3| Mus musculus BAC clone RP23-34F5 from 1, complete sequence Length = 190325 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcctgctc 38 |||||||||||||| |||||||||||| Sbjct: 110483 tcttcttcttcttcttctgctcctgctc 110510
>gb|AC133520.4| Mus musculus BAC clone RP23-185G9 from 8, complete sequence Length = 201054 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 2152 tcttcttcttcttcccctcctcct 2175
>gb|AC123062.4| Mus musculus BAC clone RP23-218A9 from 13, complete sequence Length = 186601 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 56500 tcttcttcttcttccccttctcct 56477
>gb|AC127328.6| Mus musculus BAC clone RP23-259B8 from 6, complete sequence Length = 186950 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 19598 tcttcttcttcttcccctcctcct 19621
>gb|AC134585.6| Mus musculus BAC clone RP23-302F9 from 8, complete sequence Length = 249251 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 35034 tcttcttcttcttccccttctcct 35057
>gb|AC138460.4| Mus musculus BAC clone RP23-295A7 from 8, complete sequence Length = 186258 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 34744 tcttcttcttcttccccttctcct 34721
>emb|CT010499.9| Mouse DNA sequence from clone RP23-211K24 on chromosome 9, complete sequence Length = 212470 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 44186 tcttcttcttcttcccctcctcct 44163
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 219 atcaagagatccacacagctcaagaagctgat 250 ||||||| ||||||||||||||||| ||||| Sbjct: 1011359 atcaagaagtccacacagctcaagaaactgat 1011328
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 atgaatgcctactgtgaccg 268 |||||||||||||||||||| Sbjct: 3429388 atgaatgcctactgtgaccg 3429407
>gb|AC154512.2| Mus musculus BAC clone RP24-70L20 from chromosome 16, complete sequence Length = 166329 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 134350 tcttcttcttcttccccttctcct 134327
>emb|AL929083.8| Mouse DNA sequence from clone RP23-436E15 on chromosome 2, complete sequence Length = 84875 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||| ||||||||| Sbjct: 26349 tcttcttcttcttctcctgctcct 26326
>emb|AL928992.7| Mouse DNA sequence from clone RP23-208O9 on chromosome 2, complete sequence Length = 136064 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 81153 tcttcttcttcttcccctcctcct 81176
>gb|AC166173.3| Mus musculus BAC clone RP23-101K10 from chromosome 3, complete sequence Length = 196177 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 ||||||||||||||| |||||||| Sbjct: 76077 tcttcttcttcttcctctgctcct 76100
>emb|AL627409.9| Mouse DNA sequence from clone RP23-430L23 on chromosome X, complete sequence Length = 189295 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||| ||||||||| Sbjct: 94419 tcttcttcttcttctcctgctcct 94442
>emb|AL672082.15| Mouse DNA sequence from clone RP23-67B21 on chromosome X, complete sequence Length = 243789 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||| ||||||||| Sbjct: 233644 tcttcttcttcttctcctgctcct 233621
>gb|AC151299.3| Mus musculus BAC clone RP23-11N17 from chromosome 17, complete sequence Length = 206555 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 tcttcttcttcttcccctgctcct 34 |||||||||||||||||| ||||| Sbjct: 63340 tcttcttcttcttccccttctcct 63363
>gb|M59313.1|RATPCKV32C Rat potassium channel Kv3.2c mRNA Length = 1500 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 attccattgcgttccttttt 305 |||||||||||||||||||| Sbjct: 1031 attccattgcgttccttttt 1050 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,226,866 Number of Sequences: 3902068 Number of extensions: 5226866 Number of successful extensions: 666551 Number of sequences better than 10.0: 168 Number of HSP's better than 10.0 without gapping: 168 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 660699 Number of HSP's gapped (non-prelim): 5825 length of query: 469 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 447 effective length of database: 17,147,199,772 effective search space: 7664798298084 effective search space used: 7664798298084 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
