ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast52c04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY603975.1| Oryza sativa (indica cultivar-group) respiratory ... 165 2e-37
2dbj|AK121916.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 2e-37
3dbj|AK099714.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 2e-37
4dbj|AK065117.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 2e-37
5dbj|AK060770.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 2e-37
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 149 9e-33
7dbj|AP003444.4| Oryza sativa (japonica cultivar-group) genomic D... 149 9e-33
8gb|AY596296.1| Haloarcula marismortui ATCC 43049 plasmid pNG700,... 46 0.10
9emb|CR555306.1| Azoarcus sp. EbN1 complete genome 44 0.40
10gb|BC015649.2| Homo sapiens BTB (POZ) domain containing 14A, mRN... 42 1.6
11gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 42 1.6
12ref|NM_144653.3| Homo sapiens BTB (POZ) domain containing 14A (B... 42 1.6
13ref|XM_979557.1| PREDICTED: Mus musculus similar to CG8312-PA, i... 42 1.6
14ref|XM_914541.2| PREDICTED: Mus musculus similar to CG8312-PA, i... 42 1.6
15ref|XM_890212.2| PREDICTED: Mus musculus similar to CG8312-PA, i... 42 1.6
16emb|AL591038.9| Human DNA sequence from clone RP11-120E1 on chro... 42 1.6
17emb|BX572099.1| Prochlorococcus marinus MIT9313 complete genome;... 42 1.6
18emb|CR848842.7| Human DNA sequence from clone WI2-2998D17 on chr... 42 1.6
19dbj|AK134570.1| Mus musculus adult male medulla oblongata cDNA, ... 42 1.6
20gb|U16241.1|BTBBINH2 Bos taurus betaB inhibin/activin precursor,... 42 1.6
21ref|XM_927368.1| PREDICTED: Homo sapiens similar to BTB (POZ) do... 42 1.6
22ref|NM_176852.1| Bos taurus inhibin, beta B (activin AB beta pol... 42 1.6
23dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 42 1.6
24emb|AL807249.8| Mouse DNA sequence from clone RP23-25C1 on chrom... 42 1.6
25dbj|AB041806.1| Mus musculus brain cDNA, clone MNCb-2457 42 1.6
26ref|NM_196031.1| Oryza sativa (japonica cultivar-group) unknown ... 40 6.2
27gb|AY430832.1| Uncultured prokaryote clone B04 NifJ (nifJ) gene,... 40 6.2
28gb|AC083945.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
29ref|XM_546282.2| PREDICTED: Canis familiaris similar to Heart- a... 40 6.2
30emb|X58355.1|BBBVGAS B.bronchiseptica bvg locus (transcription r... 40 6.2
31emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genom... 40 6.2
32dbj|AB091101.2| Chlamydomonas reinhardtii Pgp1 gene for phosphog... 40 6.2
33dbj|AB191485.1| Chlamydomonas reinhardtii pgp1-1 gene for mutant... 40 6.2
34dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
35dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
36dbj|AP004131.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
37dbj|AP005497.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
38dbj|AK058583.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
39gb|AY107084.1| Zea mays PCO079799 mRNA sequence 40 6.2
40gb|AY106180.1| Zea mays PCO072957 mRNA sequence 40 6.2
41dbj|AP003087.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 6.2
42gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
43dbj|AP006430.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 6.2
44emb|X98485.1|PV14GENE P.vivax PV14 gene 40 6.2 
>gb|AY603975.1| Oryza sativa (indica cultivar-group) respiratory burst oxidase
           protein B (rbohB) mRNA, complete cds
          Length = 3334

 Score =  165 bits (83), Expect = 2e-37
 Identities = 140/159 (88%)
 Strand = Plus / Plus

                                                                       
Query: 300 caagagcaccgctgcggtggcgctcaagggcctgcagtttgtgactgccaaagttggcgg 359
           |||||||| ||| || ||||||||||| ||  |||||||||||||||| || ||||||  
Sbjct: 709 caagagcagcgccgccgtggcgctcaaaggattgcagtttgtgactgcgaaggttggcaa 768

                                                                       
Query: 360 cgacggctgggccgctgtggagaagcggttcaaccacctgcaggttgatggcgtcctgct 419
            |||||||||||||| ||||||||||||||||| || |||||||| ||||| || |||||
Sbjct: 769 tgacggctgggccgcggtggagaagcggttcaatcagctgcaggtggatggtgtgctgct 828

                                                  
Query: 420 ccgttccagatttgggaaatgcattggcatggatgggtc 458
           |||||| |||||||||||||||||||| |||||||||||
Sbjct: 829 ccgttcaagatttgggaaatgcattggaatggatgggtc 867



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                       
Query: 167 ccaggttcaaagacgacgacgaggtcgtcgagatcacgctcgacgtgcagcgggatgcgg 226
           |||||||||| |||||||||||| | ||||||||||| |||||||||||||| ||| |||
Sbjct: 429 ccaggttcaaggacgacgacgagctggtcgagatcaccctcgacgtgcagcgcgattcgg 488

             
Query: 227 tg 228
           ||
Sbjct: 489 tg 490
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>dbj|AK121916.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106C16, full
           insert sequence
          Length = 3255

 Score =  165 bits (83), Expect = 2e-37
 Identities = 140/159 (88%)
 Strand = Plus / Plus

                                                                       
Query: 300 caagagcaccgctgcggtggcgctcaagggcctgcagtttgtgactgccaaagttggcgg 359
           |||||||| ||| || ||||||||||| ||  |||||||||||||||| || ||||||  
Sbjct: 783 caagagcagcgccgccgtggcgctcaaaggattgcagtttgtgactgcaaaggttggcaa 842

                                                                       
Query: 360 cgacggctgggccgctgtggagaagcggttcaaccacctgcaggttgatggcgtcctgct 419
            |||||||||||||| ||||||||||||||||| || |||||||| ||||| || |||||
Sbjct: 843 tgacggctgggccgcggtggagaagcggttcaatcagctgcaggtggatggtgtgctgct 902

                                                  
Query: 420 ccgttccagatttgggaaatgcattggcatggatgggtc 458
           |||||| |||||||||||||||||||| |||||||||||
Sbjct: 903 ccgttcaagatttgggaaatgcattggaatggatgggtc 941



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                       
Query: 167 ccaggttcaaagacgacgacgaggtcgtcgagatcacgctcgacgtgcagcgggatgcgg 226
           |||||||||| |||||||||||| | ||||||||||| |||||||||||||| ||| |||
Sbjct: 503 ccaggttcaaggacgacgacgagctggtcgagatcaccctcgacgtgcagcgcgattcgg 562

             
Query: 227 tg 228
           ||
Sbjct: 563 tg 564
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>dbj|AK099714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084G19, full
            insert sequence
          Length = 3731

 Score =  165 bits (83), Expect = 2e-37
 Identities = 140/159 (88%)
 Strand = Plus / Plus

                                                                        
Query: 300  caagagcaccgctgcggtggcgctcaagggcctgcagtttgtgactgccaaagttggcgg 359
            |||||||| ||| || ||||||||||| ||  |||||||||||||||| || ||||||  
Sbjct: 1300 caagagcagcgccgccgtggcgctcaaaggattgcagtttgtgactgcaaaggttggcaa 1359

                                                                        
Query: 360  cgacggctgggccgctgtggagaagcggttcaaccacctgcaggttgatggcgtcctgct 419
             |||||||||||||| ||||||||||||||||| || |||||||| ||||| || |||||
Sbjct: 1360 tgacggctgggccgcggtggagaagcggttcaatcagctgcaggtggatggtgtgctgct 1419

                                                   
Query: 420  ccgttccagatttgggaaatgcattggcatggatgggtc 458
            |||||| |||||||||||||||||||| |||||||||||
Sbjct: 1420 ccgttcaagatttgggaaatgcattggaatggatgggtc 1458
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>dbj|AK065117.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001O12, full
           insert sequence
          Length = 3198

 Score =  165 bits (83), Expect = 2e-37
 Identities = 140/159 (88%)
 Strand = Plus / Plus

                                                                       
Query: 300 caagagcaccgctgcggtggcgctcaagggcctgcagtttgtgactgccaaagttggcgg 359
           |||||||| ||| || ||||||||||| ||  |||||||||||||||| || ||||||  
Sbjct: 785 caagagcagcgccgccgtggcgctcaaaggattgcagtttgtgactgcaaaggttggcaa 844

                                                                       
Query: 360 cgacggctgggccgctgtggagaagcggttcaaccacctgcaggttgatggcgtcctgct 419
            |||||||||||||| ||||||||||||||||| || |||||||| ||||| || |||||
Sbjct: 845 tgacggctgggccgcggtggagaagcggttcaatcagctgcaggtggatggtgtgctgct 904

                                                  
Query: 420 ccgttccagatttgggaaatgcattggcatggatgggtc 458
           |||||| |||||||||||||||||||| |||||||||||
Sbjct: 905 ccgttcaagatttgggaaatgcattggaatggatgggtc 943



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                       
Query: 167 ccaggttcaaagacgacgacgaggtcgtcgagatcacgctcgacgtgcagcgggatgcgg 226
           |||||||||| |||||||||||| | ||||||||||| |||||||||||||| ||| |||
Sbjct: 505 ccaggttcaaggacgacgacgagctggtcgagatcaccctcgacgtgcagcgcgattcgg 564

             
Query: 227 tg 228
           ||
Sbjct: 565 tg 566
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>dbj|AK060770.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-B03, full
           insert sequence
          Length = 2978

 Score =  165 bits (83), Expect = 2e-37
 Identities = 140/159 (88%)
 Strand = Plus / Plus

                                                                       
Query: 300 caagagcaccgctgcggtggcgctcaagggcctgcagtttgtgactgccaaagttggcgg 359
           |||||||| ||| || ||||||||||| ||  |||||||||||||||| || ||||||  
Sbjct: 422 caagagcagcgccgccgtggcgctcaaaggattgcagtttgtgactgcaaaggttggcaa 481

                                                                       
Query: 360 cgacggctgggccgctgtggagaagcggttcaaccacctgcaggttgatggcgtcctgct 419
            |||||||||||||| ||||||||||||||||| || |||||||| ||||| || |||||
Sbjct: 482 tgacggctgggccgcggtggagaagcggttcaatcagctgcaggtggatggtgtgctgct 541

                                                  
Query: 420 ccgttccagatttgggaaatgcattggcatggatgggtc 458
           |||||| |||||||||||||||||||| |||||||||||
Sbjct: 542 ccgttcaagatttgggaaatgcattggaatggatgggtc 580



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                       
Query: 167 ccaggttcaaagacgacgacgaggtcgtcgagatcacgctcgacgtgcagcgggatgcgg 226
           |||||||||| |||||||||||| | ||||||||||| |||||||||||||| ||| |||
Sbjct: 142 ccaggttcaaggacgacgacgagctggtcgagatcaccctcgacgtgcagcgcgattcgg 201

             
Query: 227 tg 228
           ||
Sbjct: 202 tg 203
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  149 bits (75), Expect = 9e-33
 Identities = 129/147 (87%)
 Strand = Plus / Minus

                                                                            
Query: 300      caagagcaccgctgcggtggcgctcaagggcctgcagtttgtgactgccaaagttggcgg 359
                |||||||| ||| || ||||||||||| ||  |||||||||||||||| || ||||||  
Sbjct: 14609086 caagagcagcgccgccgtggcgctcaaaggattgcagtttgtgactgcaaaggttggcaa 14609027

                                                                            
Query: 360      cgacggctgggccgctgtggagaagcggttcaaccacctgcaggttgatggcgtcctgct 419
                 |||||||||||||| ||||||||||||||||| || |||||||| ||||| || |||||
Sbjct: 14609026 tgacggctgggccgcggtggagaagcggttcaatcagctgcaggtggatggtgtgctgct 14608967

                                           
Query: 420      ccgttccagatttgggaaatgcattgg 446
                |||||| ||||||||||||||||||||
Sbjct: 14608966 ccgttcaagatttgggaaatgcattgg 14608940



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                            
Query: 167      ccaggttcaaagacgacgacgaggtcgtcgagatcacgctcgacgtgcagcgggatgcgg 226
                |||||||||| |||||||||||| | ||||||||||| |||||||||||||| ||| |||
Sbjct: 14609366 ccaggttcaaggacgacgacgagctggtcgagatcaccctcgacgtgcagcgcgattcgg 14609307

                  
Query: 227      tg 228
                ||
Sbjct: 14609306 tg 14609305
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>dbj|AP003444.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1164G11
          Length = 142699

 Score =  149 bits (75), Expect = 9e-33
 Identities = 129/147 (87%)
 Strand = Plus / Minus

                                                                         
Query: 300   caagagcaccgctgcggtggcgctcaagggcctgcagtttgtgactgccaaagttggcgg 359
             |||||||| ||| || ||||||||||| ||  |||||||||||||||| || ||||||  
Sbjct: 90463 caagagcagcgccgccgtggcgctcaaaggattgcagtttgtgactgcaaaggttggcaa 90404

                                                                         
Query: 360   cgacggctgggccgctgtggagaagcggttcaaccacctgcaggttgatggcgtcctgct 419
              |||||||||||||| ||||||||||||||||| || |||||||| ||||| || |||||
Sbjct: 90403 tgacggctgggccgcggtggagaagcggttcaatcagctgcaggtggatggtgtgctgct 90344

                                        
Query: 420   ccgttccagatttgggaaatgcattgg 446
             |||||| ||||||||||||||||||||
Sbjct: 90343 ccgttcaagatttgggaaatgcattgg 90317



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                         
Query: 167   ccaggttcaaagacgacgacgaggtcgtcgagatcacgctcgacgtgcagcgggatgcgg 226
             |||||||||| |||||||||||| | ||||||||||| |||||||||||||| ||| |||
Sbjct: 90743 ccaggttcaaggacgacgacgagctggtcgagatcaccctcgacgtgcagcgcgattcgg 90684

               
Query: 227   tg 228
             ||
Sbjct: 90683 tg 90682
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>gb|AY596296.1| Haloarcula marismortui ATCC 43049 plasmid pNG700, complete sequence
          Length = 410554

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 178    gacgacgacgaggtcgtcgagat 200
              |||||||||||||||||||||||
Sbjct: 248800 gacgacgacgaggtcgtcgagat 248822
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 180     cgacgacgaggtcgtcgagatcacgc 205
               |||||||||| |||||||||||||||
Sbjct: 3784052 cgacgacgagctcgtcgagatcacgc 3784077
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>gb|BC015649.2| Homo sapiens BTB (POZ) domain containing 14A, mRNA (cDNA clone
           MGC:23427 IMAGE:4654320), complete cds
          Length = 2088

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 248 cggtggccgcggaggctgcggtggc 272
           |||||||||||| ||||||||||||
Sbjct: 746 cggtggccgcgggggctgcggtggc 770
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 176     aagacgacgacgaggtcgtcg 196
               |||||||||||||||||||||
Sbjct: 2195436 aagacgacgacgaggtcgtcg 2195416
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>ref|NM_144653.3| Homo sapiens BTB (POZ) domain containing 14A (BTBD14A), mRNA
          Length = 2103

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 248 cggtggccgcggaggctgcggtggc 272
           |||||||||||| ||||||||||||
Sbjct: 761 cggtggccgcgggggctgcggtggc 785
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>ref|XM_979557.1| PREDICTED: Mus musculus similar to CG8312-PA, isoform A
           (LOC625638), mRNA
          Length = 2367

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 295 tggagcaagagcaccgctgcggtgg 319
           |||| ||||||||||||||||||||
Sbjct: 59  tggaccaagagcaccgctgcggtgg 35
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>ref|XM_914541.2| PREDICTED: Mus musculus similar to CG8312-PA, isoform A
           (LOC625638), mRNA
          Length = 2367

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 295 tggagcaagagcaccgctgcggtgg 319
           |||| ||||||||||||||||||||
Sbjct: 59  tggaccaagagcaccgctgcggtgg 35
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>ref|XM_890212.2| PREDICTED: Mus musculus similar to CG8312-PA, isoform A
           (LOC625638), mRNA
          Length = 2367

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 295 tggagcaagagcaccgctgcggtgg 319
           |||| ||||||||||||||||||||
Sbjct: 59  tggaccaagagcaccgctgcggtgg 35
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>emb|AL591038.9| Human DNA sequence from clone RP11-120E1 on chromosome 9 Contains the
            5' end of gene MGC23427 and two CpG islands, complete
            sequence
          Length = 51295

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 248  cggtggccgcggaggctgcggtggc 272
            |||||||||||| ||||||||||||
Sbjct: 9088 cggtggccgcgggggctgcggtggc 9064
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>emb|BX572099.1| Prochlorococcus marinus MIT9313 complete genome; segment 5/7
          Length = 349746

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 259    gaggctgcggtggccgccgcgagga 283
              |||||||||||||||||||| ||||
Sbjct: 295780 gaggctgcggtggccgccgcaagga 295804
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>emb|CR848842.7| Human DNA sequence from clone WI2-2998D17 on chromosome 1, complete
             sequence
          Length = 44069

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 248   cggtggccgcggaggctgcggtggc 272
             |||||||||||| ||||||||||||
Sbjct: 38481 cggtggccgcgggggctgcggtggc 38457
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>dbj|AK134570.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length
           enriched library, clone:6330416F17 product:hypothetical
           Pleckstrin-homology-related containing protein, full
           insert sequence
          Length = 2361

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 295 tggagcaagagcaccgctgcggtgg 319
           |||| ||||||||||||||||||||
Sbjct: 59  tggaccaagagcaccgctgcggtgg 35
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>gb|U16241.1|BTBBINH2 Bos taurus betaB inhibin/activin precursor, gene, exon 2 and
           complete cds
          Length = 978

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 358 ggcgacggctgggccgctgtggagaagcg 386
           |||||| |||||||||| |||||||||||
Sbjct: 235 ggcgaccgctgggccgcggtggagaagcg 263
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>ref|XM_927368.1| PREDICTED: Homo sapiens similar to BTB (POZ) domain containing 14A
           (LOC653428), mRNA
          Length = 1737

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 248 cggtggccgcggaggctgcggtggc 272
           |||||||||||| ||||||||||||
Sbjct: 734 cggtggccgcgggggctgcggtggc 758
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>ref|NM_176852.1| Bos taurus inhibin, beta B (activin AB beta polypeptide) (INHBB),
           mRNA
          Length = 1227

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 358 ggcgacggctgggccgctgtggagaagcg 386
           |||||| |||||||||| |||||||||||
Sbjct: 628 ggcgaccgctgggccgcggtggagaagcg 656
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 186    cgaggtcgtcgagatcacgctcgac 210
              |||||||| ||||||||||||||||
Sbjct: 136257 cgaggtcgacgagatcacgctcgac 136281
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>emb|AL807249.8| Mouse DNA sequence from clone RP23-25C1 on chromosome 4, complete
              sequence
          Length = 248479

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 295    tggagcaagagcaccgctgcggtgg 319
              |||| ||||||||||||||||||||
Sbjct: 180929 tggaccaagagcaccgctgcggtgg 180953
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>dbj|AB041806.1| Mus musculus brain cDNA, clone MNCb-2457
          Length = 2109

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 295 tggagcaagagcaccgctgcggtgg 319
           |||| ||||||||||||||||||||
Sbjct: 791 tggaccaagagcaccgctgcggtgg 815
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>ref|NM_196031.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNBa0058E19.13), mRNA
          Length = 495

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 255 cgcggaggctgcggtggccgccgcgaggaaga 286
           ||||||||| | ||| ||||||||||||||||
Sbjct: 78  cgcggaggcggtggtcgccgccgcgaggaaga 47
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>gb|AY430832.1| Uncultured prokaryote clone B04 NifJ (nifJ) gene, partial cds
          Length = 472

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 353 ttggcggcgacggctgggcc 372
           ||||||||||||||||||||
Sbjct: 31  ttggcggcgacggctgggcc 12
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>gb|AC083945.3| Oryza sativa (japonica cultivar-group) chromosome X clone
             OSJNBa0058E19, complete sequence
          Length = 147706

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 255   cgcggaggctgcggtggccgccgcgaggaaga 286
             ||||||||| | ||| ||||||||||||||||
Sbjct: 85753 cgcggaggcggtggtcgccgccgcgaggaaga 85784
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>ref|XM_546282.2| PREDICTED: Canis familiaris similar to Heart- and neural crest
           derivatives-expressed protein 1 (Extraembryonic tissues,
           heart, autonomic nervous system and neural crest
           derivatives-expressed protein 1) (eHAND) (LOC489164),
           mRNA
          Length = 1521

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 260 aggctgcggtggccgccgcg 279
           ||||||||||||||||||||
Sbjct: 562 aggctgcggtggccgccgcg 543
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>emb|X58355.1|BBBVGAS B.bronchiseptica bvg locus (transcription regulators of virulence
           factors) with bvgA and bvgS genes
          Length = 4534

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 cgtcgagatcacgctcgacg 211
           ||||||||||||||||||||
Sbjct: 955 cgtcgagatcacgctcgacg 974
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>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16
          Length = 349737

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 179    acgacgacgaggtcgtcgag 198
              ||||||||||||||||||||
Sbjct: 292615 acgacgacgaggtcgtcgag 292634
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>dbj|AB091101.2| Chlamydomonas reinhardtii Pgp1 gene for phosphoglycolate
           phosphatase precursor, complete cds
          Length = 5745

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 241 gtcaggccggtggccgcggaggctgcgg 268
           |||||||||||||||| ||| |||||||
Sbjct: 1   gtcaggccggtggccggggaagctgcgg 28
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>dbj|AB191485.1| Chlamydomonas reinhardtii pgp1-1 gene for mutant phosphoglycolate
           phosphatase precursor, complete cds
          Length = 5741

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 241 gtcaggccggtggccgcggaggctgcgg 268
           |||||||||||||||| ||| |||||||
Sbjct: 1   gtcaggccggtggccggggaagctgcgg 28
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 255      cgcggaggctgcggtggccgccgcgaggaaga 286
                ||||||||| | ||| ||||||||||||||||
Sbjct: 10595098 cgcggaggcggtggtcgccgccgcgaggaaga 10595067
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 256      gcggaggctgcggtggccgccgcg 279
                ||||||||||||||||| ||||||
Sbjct: 18726233 gcggaggctgcggtggcggccgcg 18726210



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 248      cggtggccgcggaggctgcg 267
                ||||||||||||||||||||
Sbjct: 15880189 cggtggccgcggaggctgcg 15880208
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>dbj|AP004131.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1057_F01
          Length = 120026

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   cggtggccgcggaggctgcg 267
             ||||||||||||||||||||
Sbjct: 23864 cggtggccgcggaggctgcg 23883
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>dbj|AP005497.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0071O21
          Length = 158410

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 256   gcggaggctgcggtggccgccgcg 279
             ||||||||||||||||| ||||||
Sbjct: 68875 gcggaggctgcggtggcggccgcg 68852
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>dbj|AK058583.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-F11, full
           insert sequence
          Length = 750

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 255 cgcggaggctgcggtggccgccgcgaggaaga 286
           ||||||||| | ||| ||||||||||||||||
Sbjct: 141 cgcggaggcggtggtcgccgccgcgaggaaga 110
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>gb|AY107084.1| Zea mays PCO079799 mRNA sequence
          Length = 2167

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 246 gccggtggccgcggaggctgcggt 269
           |||| |||||||||||||||||||
Sbjct: 137 gccgttggccgcggaggctgcggt 160
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>gb|AY106180.1| Zea mays PCO072957 mRNA sequence
          Length = 718

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 354 tggcggcgacggctgggccgctgt 377
           ||||||||||||| ||||||||||
Sbjct: 414 tggcggcgacggcggggccgctgt 391
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>dbj|AP003087.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-594014, complete
             sequences
          Length = 100403

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    aagaagaaggacatggctga 71
             ||||||||||||||||||||
Sbjct: 88455 aagaagaaggacatggctga 88474
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 255      cgcggaggctgcggtggccgccgcgaggaaga 286
                ||||||||| | ||| ||||||||||||||||
Sbjct: 10601137 cgcggaggcggtggtcgccgccgcgaggaaga 10601106
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>dbj|AP006430.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT33L13, TM0327,
             complete sequence
          Length = 105384

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 251   tggccgcggaggctgcggtggccg 274
             |||| |||||||||||||||||||
Sbjct: 83775 tggcggcggaggctgcggtggccg 83752
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>emb|X98485.1|PV14GENE P.vivax PV14 gene
          Length = 2554

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 52   aagaagaaggacatggctga 71
            ||||||||||||||||||||
Sbjct: 2499 aagaagaaggacatggctga 2518


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,912,440
Number of Sequences: 3902068
Number of extensions: 3912440
Number of successful extensions: 74027
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73586
Number of HSP's gapped (non-prelim): 441
length of query: 458
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 436
effective length of database: 17,147,199,772
effective search space: 7476179100592
effective search space used: 7476179100592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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