ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast52c01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_471529.1| Oryza sativa (japonica cultivar-group), predic... 278 2e-71
2dbj|AK061149.1| Oryza sativa (japonica cultivar-group) cDNA clon... 278 2e-71
3gb|AY596541.1| Saccharum officinarum clone SCCCLR1C04B02, comple... 230 3e-57
4gb|AY107012.1| Zea mays PCO099293 mRNA sequence 228 1e-56
5gb|BT016672.1| Zea mays clone Contig505 mRNA sequence 202 7e-49
6emb|AL662975.3|OSJN00180 Oryza sativa genomic DNA, chromosome 4,... 149 9e-33
7dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 149 9e-33
8dbj|AK060229.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 2e-12
9dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
10dbj|AP005180.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
11dbj|AK105890.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.39
12dbj|AK069604.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.39
13emb|AL606659.3|OSJN00108 Oryza sativa genomic DNA, chromosome 4,... 42 1.6
14emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4,... 42 1.6
15emb|AL583886.11| Mouse DNA sequence from clone RP23-402G11 on ch... 42 1.6
16gb|AC149405.2| Phakopsora pachyrhizi clone JGIAFNA-69I11, comple... 40 6.2
17ref|XM_528454.1| PREDICTED: Pan troglodytes similar to ribosomal... 40 6.2
18ref|NM_196328.1| Oryza sativa (japonica cultivar-group) putative... 40 6.2
19ref|XM_477725.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.2
20ref|XM_322869.1| Neurospora crassa OR74A predicted protein (NCU1... 40 6.2
21ref|XM_952980.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.2
22gb|AY678277.1| Vaccinia virus strain LC16mO, complete genome 40 6.2
23gb|AY678276.1| Vaccinia virus strain Lister, complete genome 40 6.2
24gb|AY678275.1| Vaccinia virus strain LC16m8, complete genome 40 6.2
25ref|NG_000837.1| Homo sapiens surfeit locus (SURF@) on chromosome 9 40 6.2
26gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 6.2
27emb|AL158826.23| Human DNA sequence from clone RP11-244N20 on ch... 40 6.2
28dbj|AK126069.1| Homo sapiens cDNA FLJ44081 fis, clone TESTI40403... 40 6.2
29dbj|AK124518.1| Homo sapiens cDNA FLJ42527 fis, clone BRACE30017... 40 6.2
30gb|AC122144.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
31gb|AC092388.5| Oryza sativa chromosome 10 BAC OSJNBa0011L09 geno... 40 6.2
32dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
33dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
34dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
35dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
36dbj|AP005831.5| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
37dbj|AK066139.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
38gb|AF134587.1|AF134587 Streptomyces chrysomallus actinomycin syn... 40 6.2
39gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
40gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
41emb|AL732532.4|CNS08C97 Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.2
42gb|AC002107.1|AC002107 Genomic sequence from Human 9q34, complet... 40 6.2 
>ref|XM_471529.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 621

 Score =  278 bits (140), Expect = 2e-71
 Identities = 222/248 (89%), Gaps = 1/248 (0%)
 Strand = Plus / Plus

                                                                       
Query: 211 cgcgccgcgcctctcgggctctgcgtcgccgccatggccgtcatgctccgcgacacgcag 270
           ||||||||||| || |||||||||||||||||||||||| ||||||||||| || ||   
Sbjct: 121 cgcgccgcgccgctggggctctgcgtcgccgccatggccatcatgctccgcaactcggtc 180

                                                                       
Query: 271 accaacgagtacggcaccgtctcctactccgacctcggcggattcaagtacctggtctat 330
           ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || 
Sbjct: 181 accaacgagtacggcaccgtctcctactccgacctcggcggcttcaagtacctggtgtac 240

                                                                       
Query: 331 gcgaacgggctgtgcgcggcctactccctcgtctccgcgttctacactgccgtgccgcgg 390
           ||||||||||| ||||| |||||||| || |  || ||||||||||  ||||||||| ||
Sbjct: 241 gcgaacgggctctgcgccgcctactcgctggcgtcggcgttctacatcgccgtgccgagg 300

                                                                       
Query: 391 ccggcgacgctgtcccgctcctggatcgtcttcctcctaga-caggtgttcacgtacctg 449
           ||||||||| |||||||||||||| |||| |||||||| || ||||||||||||||||||
Sbjct: 301 ccggcgacgttgtcccgctcctgggtcgttttcctcctcgaccaggtgttcacgtacctg 360

                   
Query: 450 atcctggc 457
           ||||||||
Sbjct: 361 atcctggc 368
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>dbj|AK061149.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-E03, full
           insert sequence
          Length = 977

 Score =  278 bits (140), Expect = 2e-71
 Identities = 222/248 (89%), Gaps = 1/248 (0%)
 Strand = Plus / Plus

                                                                       
Query: 211 cgcgccgcgcctctcgggctctgcgtcgccgccatggccgtcatgctccgcgacacgcag 270
           ||||||||||| || |||||||||||||||||||||||| ||||||||||| || ||   
Sbjct: 220 cgcgccgcgccgctggggctctgcgtcgccgccatggccatcatgctccgcaactcggtc 279

                                                                       
Query: 271 accaacgagtacggcaccgtctcctactccgacctcggcggattcaagtacctggtctat 330
           ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || 
Sbjct: 280 accaacgagtacggcaccgtctcctactccgacctcggcggcttcaagtacctggtgtac 339

                                                                       
Query: 331 gcgaacgggctgtgcgcggcctactccctcgtctccgcgttctacactgccgtgccgcgg 390
           ||||||||||| ||||| |||||||| || |  || ||||||||||  ||||||||| ||
Sbjct: 340 gcgaacgggctctgcgccgcctactcgctggcgtcggcgttctacatcgccgtgccgagg 399

                                                                       
Query: 391 ccggcgacgctgtcccgctcctggatcgtcttcctcctaga-caggtgttcacgtacctg 449
           ||||||||| |||||||||||||| |||| |||||||| || ||||||||||||||||||
Sbjct: 400 ccggcgacgttgtcccgctcctgggtcgttttcctcctcgaccaggtgttcacgtacctg 459

                   
Query: 450 atcctggc 457
           ||||||||
Sbjct: 460 atcctggc 467



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 85  gagatgtccaagatgacggacgagaaggtgatttcggcgccggc 128
           ||||||||||||||| |||| ||||||||| |  ||||||||||
Sbjct: 88  gagatgtccaagatggcggaggagaaggtgctggcggcgccggc 131
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>gb|AY596541.1| Saccharum officinarum clone SCCCLR1C04B02, complete sequence
          Length = 883

 Score =  230 bits (116), Expect = 3e-57
 Identities = 225/260 (86%), Gaps = 1/260 (0%)
 Strand = Plus / Plus

                                                                       
Query: 199 gagacgcttttgcgcgccgcgcctctcgggctctgcgtcgccgccatggccgtcatgctc 258
           ||||||||| ||||||| ||||| || ||||| ||||| ||||||||| |||||||||||
Sbjct: 166 gagacgcttctgcgcgcggcgccgctggggctgtgcgtggccgccatgaccgtcatgctc 225

                                                                       
Query: 259 cgcgacacgcagaccaacgagtacggcaccgtctcctactccgacctcggcggattcaag 318
           || |||  ||||| ||||||||||||||||||| ||||||||||||| || || ||||||
Sbjct: 226 cgtgaccagcagagcaacgagtacggcaccgtcgcctactccgacctggggggcttcaag 285

                                                                       
Query: 319 tacctggtctatgcgaacgggctgtgcgcggcctactccctcgtctccgcgttctacact 378
           ||||| ||||| || |||||  | ||||| |||||||| || || |||||||||||||| 
Sbjct: 286 tacctcgtctacgccaacggcatctgcgccgcctactcgctggtgtccgcgttctacacg 345

                                                                       
Query: 379 gccgtgccgcggccggcgacgctgtcccgctcctggatcgtcttcctcctaga-caggtg 437
           ||||||||| |||| || ||  |||| ||||||||| ||||||||||||| || ||||||
Sbjct: 346 gccgtgccgaggcccgccaccgtgtcgcgctcctgggtcgtcttcctcctcgaccaggtg 405

                               
Query: 438 ttcacgtacctgatcctggc 457
           ||||||||||||||||||||
Sbjct: 406 ttcacgtacctgatcctggc 425
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>gb|AY107012.1| Zea mays PCO099293 mRNA sequence
          Length = 976

 Score =  228 bits (115), Expect = 1e-56
 Identities = 245/287 (85%), Gaps = 1/287 (0%)
 Strand = Plus / Plus

                                                                       
Query: 172 gccgcggaggcgcgggtccgtccgctggagacgcttttgcgcgccgcgcctctcgggctc 231
           ||||||| ||||||||| || ||  ||||||||||  | ||||| || || || ||||||
Sbjct: 243 gccgcggcggcgcgggtgcggcccgtggagacgctgcttcgcgcggcaccgctggggctc 302

                                                                       
Query: 232 tgcgtcgccgccatggccgtcatgctccgcgacacgcagaccaacgagtacggcaccgtc 291
           ||||| ||||||||| |||||||||||||  ||  ||||| ||||||||||||| |||||
Sbjct: 303 tgcgtggccgccatgaccgtcatgctccgtaaccagcagagcaacgagtacggcgccgtc 362

                                                                       
Query: 292 tcctactccgacctcggcggattcaagtacctggtctatgcgaacgggctgtgcgcggcc 351
            ||||||||||||| || || ||||||||||| ||||| || ||||| || ||||| |||
Sbjct: 363 gcctactccgacctgggaggcttcaagtacctcgtctacgccaacggcctctgcgctgcc 422

                                                                       
Query: 352 tactccctcgtctccgcgttctacactgccgtgccgcggccggcgacgctgtcccgctcc 411
           ||||| || || |||||||||||||||||||||||| |||| || ||  |||| ||||||
Sbjct: 423 tactcgctggtatccgcgttctacactgccgtgccgaggcctgccaccgtgtcgcgctcc 482

                                                          
Query: 412 tggatcgtcttcctcctaga-caggtgttcacgtacctgatcctggc 457
           ||| ||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 483 tggctcgtcttcctcctcgaccaggtgttcacgtacctgatcctggc 529
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>gb|BT016672.1| Zea mays clone Contig505 mRNA sequence
          Length = 808

 Score =  202 bits (102), Expect = 7e-49
 Identities = 223/262 (85%), Gaps = 1/262 (0%)
 Strand = Plus / Plus

                                                                       
Query: 197 tggagacgcttttgcgcgccgcgcctctcgggctctgcgtcgccgccatggccgtcatgc 256
           ||||||||||  | ||||| || || || ||||||||||| ||||||||| |||||||||
Sbjct: 210 tggagacgctgcttcgcgcggcaccgctggggctctgcgtggccgccatgaccgtcatgc 269

                                                                       
Query: 257 tccgcgacacgcagaccaacgagtacggcaccgtctcctactccgacctcggcggattca 316
           ||||  ||  ||||| ||||||||||||| ||||| ||||||||||||| || || ||||
Sbjct: 270 tccgtaaccagcagagcaacgagtacggcgccgtcgcctactccgacctgggaggcttca 329

                                                                       
Query: 317 agtacctggtctatgcgaacgggctgtgcgcggcctactccctcgtctccgcgttctaca 376
           ||||||| || || || ||||| || ||||| |||||||| || || |||||||||||||
Sbjct: 330 agtacctcgtatacgccaacggcctctgcgctgcctactcgctggtatccgcgttctaca 389

                                                                       
Query: 377 ctgccgtgccgcggccggcgacgctgtcccgctcctggatcgtcttcctcctaga-cagg 435
           ||||||||||| |||| ||  |  |||| ||||||||| ||||||||||||| || ||||
Sbjct: 390 ctgccgtgccgaggcctgcccccgtgtcgcgctcctggctcgtcttcctcctcgaccagg 449

                                 
Query: 436 tgttcacgtacctgatcctggc 457
           ||||||||||||||||||||||
Sbjct: 450 tgttcacgtacctgatcctggc 471
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>emb|AL662975.3|OSJN00180 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0071G03,
            complete sequence
          Length = 135169

 Score =  149 bits (75), Expect = 9e-33
 Identities = 102/111 (91%)
 Strand = Plus / Plus

                                                                        
Query: 211  cgcgccgcgcctctcgggctctgcgtcgccgccatggccgtcatgctccgcgacacgcag 270
            ||||||||||| || |||||||||||||||||||||||| ||||||||||| || ||   
Sbjct: 7655 cgcgccgcgccgctggggctctgcgtcgccgccatggccatcatgctccgcaactcggtc 7714

                                                               
Query: 271  accaacgagtacggcaccgtctcctactccgacctcggcggattcaagtac 321
            ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 7715 accaacgagtacggcaccgtctcctactccgacctcggcggcttcaagtac 7765



 Score =  101 bits (51), Expect = 2e-18
 Identities = 96/111 (86%)
 Strand = Plus / Plus

                                                                        
Query: 318  gtacctggtctatgcgaacgggctgtgcgcggcctactccctcgtctccgcgttctacac 377
            ||||||||| || ||||||||||| ||||| |||||||| || |  || |||||||||| 
Sbjct: 7856 gtacctggtgtacgcgaacgggctctgcgccgcctactcgctggcgtcggcgttctacat 7915

                                                               
Query: 378  tgccgtgccgcggccggcgacgctgtcccgctcctggatcgtcttcctcct 428
             ||||||||| ||||||||||| |||||||||||||| |||| ||||||||
Sbjct: 7916 cgccgtgccgaggccggcgacgttgtcccgctcctgggtcgttttcctcct 7966



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                      
Query: 432  caggtgttcacgtacctgatcctggc 457
            ||||||||||||||||||||||||||
Sbjct: 9334 caggtgttcacgtacctgatcctggc 9359



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                        
Query: 85   gagatgtccaagatgacggacgagaaggtgatttcggcgccggc 128
            ||||||||||||||| |||| ||||||||| |  ||||||||||
Sbjct: 7523 gagatgtccaagatggcggaggagaaggtgctggcggcgccggc 7566
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  149 bits (75), Expect = 9e-33
 Identities = 102/111 (91%)
 Strand = Plus / Plus

                                                                            
Query: 211      cgcgccgcgcctctcgggctctgcgtcgccgccatggccgtcatgctccgcgacacgcag 270
                ||||||||||| || |||||||||||||||||||||||| ||||||||||| || ||   
Sbjct: 12079105 cgcgccgcgccgctggggctctgcgtcgccgccatggccatcatgctccgcaactcggtc 12079164

                                                                   
Query: 271      accaacgagtacggcaccgtctcctactccgacctcggcggattcaagtac 321
                ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 12079165 accaacgagtacggcaccgtctcctactccgacctcggcggcttcaagtac 12079215



 Score =  101 bits (51), Expect = 2e-18
 Identities = 96/111 (86%)
 Strand = Plus / Plus

                                                                            
Query: 318      gtacctggtctatgcgaacgggctgtgcgcggcctactccctcgtctccgcgttctacac 377
                ||||||||| || ||||||||||| ||||| |||||||| || |  || |||||||||| 
Sbjct: 12079306 gtacctggtgtacgcgaacgggctctgcgccgcctactcgctggcgtcggcgttctacat 12079365

                                                                   
Query: 378      tgccgtgccgcggccggcgacgctgtcccgctcctggatcgtcttcctcct 428
                 ||||||||| ||||||||||| |||||||||||||| |||| ||||||||
Sbjct: 12079366 cgccgtgccgaggccggcgacgttgtcccgctcctgggtcgttttcctcct 12079416



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                          
Query: 432      caggtgttcacgtacctgatcctggc 457
                ||||||||||||||||||||||||||
Sbjct: 12080784 caggtgttcacgtacctgatcctggc 12080809



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                            
Query: 85       gagatgtccaagatgacggacgagaaggtgatttcggcgccggc 128
                ||||||||||||||| |||| ||||||||| |  ||||||||||
Sbjct: 12078973 gagatgtccaagatggcggaggagaaggtgctggcggcgccggc 12079016



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 384      gccgcggccggcgacgctgtc 404
                |||||||||||||||||||||
Sbjct: 25630576 gccgcggccggcgacgctgtc 25630596
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>dbj|AK060229.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-H01, full
           insert sequence
          Length = 524

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 65/73 (89%)
 Strand = Plus / Plus

                                                                       
Query: 211 cgcgccgcgcctctcgggctctgcgtcgccgccatggccgtcatgctccgcgacacgcag 270
           ||||||||||| || |||||||||||||||||||||||| ||||||||||| || ||   
Sbjct: 183 cgcgccgcgccgctggggctctgcgtcgccgccatggccatcatgctccgcaactcggtc 242

                        
Query: 271 accaacgagtacg 283
           |||||||||||||
Sbjct: 243 accaacgagtacg 255



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 85  gagatgtccaagatgacggacgagaaggtgatttcggcgccggc 128
           ||||||||||||||| |||| ||||||||| |  ||||||||||
Sbjct: 51  gagatgtccaagatggcggaggagaaggtgctggcggcgccggc 94
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 390      gccggcgacgctgtcccgctcc 411
                ||||||||||||||||||||||
Sbjct: 16621443 gccggcgacgctgtcccgctcc 16621422



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 126      ggcgacgggcggaggggagg 145
                ||||||||||||||||||||
Sbjct: 13509984 ggcgacgggcggaggggagg 13509965
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>dbj|AP005180.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0003B09
          Length = 161813

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 390    gccggcgacgctgtcccgctcc 411
              ||||||||||||||||||||||
Sbjct: 112063 gccggcgacgctgtcccgctcc 112042
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>dbj|AK105890.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-E06, full
           insert sequence
          Length = 1012

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 390 gccggcgacgctgtcccgctcc 411
           ||||||||||||||||||||||
Sbjct: 720 gccggcgacgctgtcccgctcc 699
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>dbj|AK069604.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025D08, full
           insert sequence
          Length = 1101

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 390 gccggcgacgctgtcccgctcc 411
           ||||||||||||||||||||||
Sbjct: 797 gccggcgacgctgtcccgctcc 776
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>emb|AL606659.3|OSJN00108 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0070J16,
             complete sequence
          Length = 130718

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 384   gccgcggccggcgacgctgtc 404
             |||||||||||||||||||||
Sbjct: 10303 gccgcggccggcgacgctgtc 10323
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>emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0004N05,
              complete sequence
          Length = 158601

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 384    gccgcggccggcgacgctgtc 404
              |||||||||||||||||||||
Sbjct: 116774 gccgcggccggcgacgctgtc 116794
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>emb|AL583886.11| Mouse DNA sequence from clone RP23-402G11 on chromosome 15, complete
            sequence
          Length = 198994

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 3    gcaagcaaccgggaccgggagtgag 27
            |||||||||| ||||||||||||||
Sbjct: 7490 gcaagcaacctggaccgggagtgag 7514
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>gb|AC149405.2| Phakopsora pachyrhizi clone JGIAFNA-69I11, complete sequence
          Length = 36797

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 113   tgatttcggcgccggcgacg 132
             ||||||||||||||||||||
Sbjct: 16689 tgatttcggcgccggcgacg 16670
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>ref|XM_528454.1| PREDICTED: Pan troglodytes similar to ribosomal protein L7a;
           thyroid hormone receptor uncoupling protein; 60S
           ribosomal protein L7a; surfeit 3; surfeit locus protein
           3; PLA-X polypeptide (LOC473084), mRNA
          Length = 1062

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 211 cgcgccgcgcctctcgggctctgc 234
           ||||||||||||||||| ||||||
Sbjct: 39  cgcgccgcgcctctcggcctctgc 62
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>ref|NM_196328.1| Oryza sativa (japonica cultivar-group) putative Bronze-2 protein
           (OSJNBa0011L09.7), mRNA
          Length = 735

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 237 cgccgccatggccgtcatgc 256
           ||||||||||||||||||||
Sbjct: 645 cgccgccatggccgtcatgc 664
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>ref|XM_477725.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 387

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 126 ggcgacgggcggaggggagg 145
           ||||||||||||||||||||
Sbjct: 132 ggcgacgggcggaggggagg 151
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>ref|XM_322869.1| Neurospora crassa OR74A predicted protein (NCU10012.1) partial mRNA
          Length = 897

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 434 ggtgttcacgtacctgatcc 453
           ||||||||||||||||||||
Sbjct: 672 ggtgttcacgtacctgatcc 691
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>ref|XM_952980.1| Neurospora crassa OR74A hypothetical protein (NCU10012.1) partial
           mRNA
          Length = 897

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 434 ggtgttcacgtacctgatcc 453
           ||||||||||||||||||||
Sbjct: 672 ggtgttcacgtacctgatcc 691
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>gb|AY678277.1| Vaccinia virus strain LC16mO, complete genome
          Length = 189157

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 230    tctgcgtcgccgccatggcc 249
              ||||||||||||||||||||
Sbjct: 181963 tctgcgtcgccgccatggcc 181982
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>gb|AY678276.1| Vaccinia virus strain Lister, complete genome
          Length = 189122

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 230    tctgcgtcgccgccatggcc 249
              ||||||||||||||||||||
Sbjct: 181892 tctgcgtcgccgccatggcc 181911
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>gb|AY678275.1| Vaccinia virus strain LC16m8, complete genome
          Length = 189158

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 230    tctgcgtcgccgccatggcc 249
              ||||||||||||||||||||
Sbjct: 181964 tctgcgtcgccgccatggcc 181983
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>ref|NG_000837.1| Homo sapiens surfeit locus (SURF@) on chromosome 9
          Length = 45425

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 211   cgcgccgcgcctctcgggctctgc 234
             ||||||||||||||||| ||||||
Sbjct: 16919 cgcgccgcgcctctcggcctctgc 16942
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 198     ggagacgcttttgcgcgccgcgcc 221
               ||||||||||||| ||||||||||
Sbjct: 3404460 ggagacgcttttgagcgccgcgcc 3404437
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>emb|AL158826.23| Human DNA sequence from clone RP11-244N20 on chromosome 9 Contains the
             5' end of the ABO gene for ABO blood group (transferase A
             alpha 1-3-N-acetylgalactosaminyltransferase; transferase B
             alpha 1-3-galactosyltransferase) pseudogene ABO-*O02
             allele, the gene for a novel protein similar to lipocalin
             1 (protein migrating faster than albumin tear prealbumin)
             (LCN1), a ribosomal protein L21 (RPL21) pseudogene, the
             RPL7A gene for ribosomal protein L7a, a novel gene
             (MGC43306), the XPMC2H gene for Xenopus prevents mitotic
             catastrophe 2 homolog, the 5' end of the ADAMTS13 gene for
             a disintegrin-like and metalloprotease (reprolysin type)
             with thrombospondin type 1 motif 13, the SURF1 gene for
             surfeit 1, the SURF2 gene for surfeit 2, the SURF4 gene
             for surfeit 4, the SURF5 gene for surfeit 5, the SURF6
             gene for surfeit 6 and eight CpG islands, complete
             sequence
          Length = 184513

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 211   cgcgccgcgcctctcgggctctgc 234
             ||||||||||||||||| ||||||
Sbjct: 81116 cgcgccgcgcctctcggcctctgc 81139
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>dbj|AK126069.1| Homo sapiens cDNA FLJ44081 fis, clone TESTI4040363, highly  similar
           to Surfeit locus protein 5
          Length = 3886

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 211 cgcgccgcgcctctcgggctctgc 234
           ||||||||||||||||| ||||||
Sbjct: 175 cgcgccgcgcctctcggcctctgc 152
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>dbj|AK124518.1| Homo sapiens cDNA FLJ42527 fis, clone BRACE3001754, highly  similar
           to Surfeit locus protein 5
          Length = 4370

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 211 cgcgccgcgcctctcgggctctgc 234
           ||||||||||||||||| ||||||
Sbjct: 99  cgcgccgcgcctctcggcctctgc 76
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>gb|AC122144.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAa0011L09, complete sequence
          Length = 121055

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   cgccgccatggccgtcatgc 256
             ||||||||||||||||||||
Sbjct: 45132 cgccgccatggccgtcatgc 45113
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>gb|AC092388.5| Oryza sativa chromosome 10 BAC OSJNBa0011L09 genomic sequence, complete
             sequence
          Length = 177565

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   cgccgccatggccgtcatgc 256
             ||||||||||||||||||||
Sbjct: 14869 cgccgccatggccgtcatgc 14888
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 240      cgccatggccgtcatgctcc 259
                ||||||||||||||||||||
Sbjct: 26458319 cgccatggccgtcatgctcc 26458338
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 237      cgccgccatggccgtcatgc 256
                ||||||||||||||||||||
Sbjct: 12748693 cgccgccatggccgtcatgc 12748674
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 354      ctccctcgtctccgcgttct 373
                ||||||||||||||||||||
Sbjct: 17405071 ctccctcgtctccgcgttct 17405052
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>dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0054F02
          Length = 180651

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 354    ctccctcgtctccgcgttct 373
              ||||||||||||||||||||
Sbjct: 128984 ctccctcgtctccgcgttct 128965
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>dbj|AP005831.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1123E10
          Length = 134641

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   ggcgacgggcggaggggagg 145
             ||||||||||||||||||||
Sbjct: 89667 ggcgacgggcggaggggagg 89648
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>dbj|AK066139.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013054P13, full
           insert sequence
          Length = 1314

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 354 ctccctcgtctccgcgttct 373
           ||||||||||||||||||||
Sbjct: 729 ctccctcgtctccgcgttct 710
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>gb|AF134587.1|AF134587 Streptomyces chrysomallus actinomycin synthetase I (acmA) gene,
           complete cds
          Length = 1419

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 147 cgggctgatcgcaggggacctgtc 170
           |||||||||||| |||||||||||
Sbjct: 855 cgggctgatcgccggggacctgtc 878
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 237      cgccgccatggccgtcatgc 256
                ||||||||||||||||||||
Sbjct: 12756033 cgccgccatggccgtcatgc 12756014
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 240      cgccatggccgtcatgctcc 259
                ||||||||||||||||||||
Sbjct: 26386488 cgccatggccgtcatgctcc 26386507
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>emb|AL732532.4|CNS08C97 Oryza sativa chromosome 12, . BAC OSJNBa0027I07 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 146366

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 240   cgccatggccgtcatgctcc 259
             ||||||||||||||||||||
Sbjct: 83757 cgccatggccgtcatgctcc 83738
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>gb|AC002107.1|AC002107 Genomic sequence from Human 9q34, complete sequence
          Length = 39265

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 211   cgcgccgcgcctctcgggctctgc 234
             ||||||||||||||||| ||||||
Sbjct: 28318 cgcgccgcgcctctcggcctctgc 28341


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,440,941
Number of Sequences: 3902068
Number of extensions: 2440941
Number of successful extensions: 49379
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48855
Number of HSP's gapped (non-prelim): 518
length of query: 457
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 435
effective length of database: 17,147,199,772
effective search space: 7459031900820
effective search space used: 7459031900820
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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