ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast52b12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009091.1| Triticum aestivum clone wkm2c.pk0003.c3:fis, full insert mRNA sequence Length = 1123 Score = 323 bits (163), Expect = 3e-85 Identities = 271/307 (88%) Strand = Plus / Plus Query: 137 ccatcgcggtcggcgacaagctgcccgacgccacgctctcctacttcgacccagccgacg 196 ||||||||||||||||| ||| ||||| || |||||||||||||||||| | |||||| Sbjct: 241 ccatcgcggtcggcgaccggctccccgaagcgacgctctcctacttcgacgcccccgacg 300 Query: 197 gcgagctgaagacggtgacggtcggcgacctcacggcggggaagaaggtcgtgctcttcg 256 ||||||||||||||||||||||| |||||||||| ||||| |||||||| || || |||| Sbjct: 301 gcgagctgaagacggtgacggtccgcgacctcaccgcgggcaagaaggtggtcctgttcg 360 Query: 257 ctgtcccgggcgccttcaccccgacctgctcgcagaagcacctgccggggttcgtcgaga 316 | ||||||||||||||||| || |||||| | ||||||||||| ||||||||||| | | Sbjct: 361 cggtcccgggcgccttcacgcccacctgcacccagaagcacctcccggggttcgtggcca 420 Query: 317 aggcgggcgagctgcgcgccaagggggtggacaccgtggcgtgcgtctcggtgaacgacg 376 ||| || |||||||||||||||||||||||||||||||| |||||||| || ||||||| Sbjct: 421 gggccggggagctgcgcgccaagggggtggacaccgtggcctgcgtctccgtcaacgacg 480 Query: 377 ccttcgtgatgaaggcgtggaaggagagcctcggcctcggcgacgacgtgctgctgctgt 436 | ||||||||| ||||||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 481 cgttcgtgatgcgcgcgtggaaggagagcctcggcgtcggcgacgaggtgctgctcctgt 540 Query: 437 cggacgg 443 ||||||| Sbjct: 541 cggacgg 547
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 315 bits (159), Expect = 7e-83 Identities = 270/307 (87%) Strand = Plus / Plus Query: 122 ccccggtcgtggccaccatcgcggtcggcgacaagctgcccgacgccacgctctcctact 181 |||||| || |||||||||||||||||| |||||||| |||||||| ||||||||||||| Sbjct: 24830689 ccccggccgcggccaccatcgcggtcggggacaagctccccgacgcgacgctctcctact 24830748 Query: 182 tcgacccagccgacggcgagctgaagacggtgacggtcggcgacctcacggcggggaaga 241 ||||| | ||||||| ||||||||||||||||| || |||||||||| || ||||||| Sbjct: 24830749 tcgactcgcccgacggggagctgaagacggtgaccgtgcgcgacctcaccgccgggaaga 24830808 Query: 242 aggtcgtgctcttcgctgtcccgggcgccttcaccccgacctgctcgcagaagcacctgc 301 |||| || |||||||| ||||| ||||| ||||||||||||||| ||||||||||| | | Sbjct: 24830809 aggtggtcctcttcgcggtccccggcgcgttcaccccgacctgcacgcagaagcacgtcc 24830868 Query: 302 cggggttcgtcgagaaggcgggcgagctgcgcgccaagggggtggacaccgtggcgtgcg 361 |||||||||||| ||||| || ||||| |||||||||||||| ||| ||||||| |||| Sbjct: 24830869 cggggttcgtcgccaaggccggggagctccgcgccaagggggtcgacgccgtggcctgcg 24830928 Query: 362 tctcggtgaacgacgccttcgtgatgaaggcgtggaaggagagcctcggcctcggcgacg 421 |||| || |||||||| ||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 24830929 tctccgtcaacgacgcgttcgtgatgcgggcgtggaaggagagcctcggcgtcggcgacg 24830988 Query: 422 acgtgct 428 | ||||| Sbjct: 24830989 aggtgct 24830995
>dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0072A21 Length = 158287 Score = 315 bits (159), Expect = 7e-83 Identities = 270/307 (87%) Strand = Plus / Plus Query: 122 ccccggtcgtggccaccatcgcggtcggcgacaagctgcccgacgccacgctctcctact 181 |||||| || |||||||||||||||||| |||||||| |||||||| ||||||||||||| Sbjct: 41772 ccccggccgcggccaccatcgcggtcggggacaagctccccgacgcgacgctctcctact 41831 Query: 182 tcgacccagccgacggcgagctgaagacggtgacggtcggcgacctcacggcggggaaga 241 ||||| | ||||||| ||||||||||||||||| || |||||||||| || ||||||| Sbjct: 41832 tcgactcgcccgacggggagctgaagacggtgaccgtgcgcgacctcaccgccgggaaga 41891 Query: 242 aggtcgtgctcttcgctgtcccgggcgccttcaccccgacctgctcgcagaagcacctgc 301 |||| || |||||||| ||||| ||||| ||||||||||||||| ||||||||||| | | Sbjct: 41892 aggtggtcctcttcgcggtccccggcgcgttcaccccgacctgcacgcagaagcacgtcc 41951 Query: 302 cggggttcgtcgagaaggcgggcgagctgcgcgccaagggggtggacaccgtggcgtgcg 361 |||||||||||| ||||| || ||||| |||||||||||||| ||| ||||||| |||| Sbjct: 41952 cggggttcgtcgccaaggccggggagctccgcgccaagggggtcgacgccgtggcctgcg 42011 Query: 362 tctcggtgaacgacgccttcgtgatgaaggcgtggaaggagagcctcggcctcggcgacg 421 |||| || |||||||| ||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 42012 tctccgtcaacgacgcgttcgtgatgcgggcgtggaaggagagcctcggcgtcggcgacg 42071 Query: 422 acgtgct 428 | ||||| Sbjct: 42072 aggtgct 42078
>dbj|AP004680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0029G06 Length = 169711 Score = 315 bits (159), Expect = 7e-83 Identities = 270/307 (87%) Strand = Plus / Plus Query: 122 ccccggtcgtggccaccatcgcggtcggcgacaagctgcccgacgccacgctctcctact 181 |||||| || |||||||||||||||||| |||||||| |||||||| ||||||||||||| Sbjct: 164370 ccccggccgcggccaccatcgcggtcggggacaagctccccgacgcgacgctctcctact 164429 Query: 182 tcgacccagccgacggcgagctgaagacggtgacggtcggcgacctcacggcggggaaga 241 ||||| | ||||||| ||||||||||||||||| || |||||||||| || ||||||| Sbjct: 164430 tcgactcgcccgacggggagctgaagacggtgaccgtgcgcgacctcaccgccgggaaga 164489 Query: 242 aggtcgtgctcttcgctgtcccgggcgccttcaccccgacctgctcgcagaagcacctgc 301 |||| || |||||||| ||||| ||||| ||||||||||||||| ||||||||||| | | Sbjct: 164490 aggtggtcctcttcgcggtccccggcgcgttcaccccgacctgcacgcagaagcacgtcc 164549 Query: 302 cggggttcgtcgagaaggcgggcgagctgcgcgccaagggggtggacaccgtggcgtgcg 361 |||||||||||| ||||| || ||||| |||||||||||||| ||| ||||||| |||| Sbjct: 164550 cggggttcgtcgccaaggccggggagctccgcgccaagggggtcgacgccgtggcctgcg 164609 Query: 362 tctcggtgaacgacgccttcgtgatgaaggcgtggaaggagagcctcggcctcggcgacg 421 |||| || |||||||| ||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 164610 tctccgtcaacgacgcgttcgtgatgcgggcgtggaaggagagcctcggcgtcggcgacg 164669 Query: 422 acgtgct 428 | ||||| Sbjct: 164670 aggtgct 164676
>dbj|AK104130.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H07, full insert sequence Length = 1098 Score = 315 bits (159), Expect = 7e-83 Identities = 270/307 (87%) Strand = Plus / Plus Query: 122 ccccggtcgtggccaccatcgcggtcggcgacaagctgcccgacgccacgctctcctact 181 |||||| || |||||||||||||||||| |||||||| |||||||| ||||||||||||| Sbjct: 194 ccccggccgcggccaccatcgcggtcggggacaagctccccgacgcgacgctctcctact 253 Query: 182 tcgacccagccgacggcgagctgaagacggtgacggtcggcgacctcacggcggggaaga 241 ||||| | ||||||| ||||||||||||||||| || |||||||||| || ||||||| Sbjct: 254 tcgactcgcccgacggggagctgaagacggtgaccgtgcgcgacctcaccgccgggaaga 313 Query: 242 aggtcgtgctcttcgctgtcccgggcgccttcaccccgacctgctcgcagaagcacctgc 301 |||| || |||||||| ||||| ||||| ||||||||||||||| ||||||||||| | | Sbjct: 314 aggtggtcctcttcgcggtccccggcgcgttcaccccgacctgcacgcagaagcacgtcc 373 Query: 302 cggggttcgtcgagaaggcgggcgagctgcgcgccaagggggtggacaccgtggcgtgcg 361 |||||||||||| ||||| || ||||| |||||||||||||| ||| ||||||| |||| Sbjct: 374 cggggttcgtcgccaaggccggggagctccgcgccaagggggtcgacgccgtggcctgcg 433 Query: 362 tctcggtgaacgacgccttcgtgatgaaggcgtggaaggagagcctcggcctcggcgacg 421 |||| || |||||||| ||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 434 tctccgtcaacgacgcgttcgtgatgcgggcgtggaaggagagcctcggcgtcggcgacg 493 Query: 422 acgtgct 428 | ||||| Sbjct: 494 aggtgct 500
>dbj|AK068955.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003C09, full insert sequence Length = 1140 Score = 315 bits (159), Expect = 7e-83 Identities = 270/307 (87%) Strand = Plus / Plus Query: 122 ccccggtcgtggccaccatcgcggtcggcgacaagctgcccgacgccacgctctcctact 181 |||||| || |||||||||||||||||| |||||||| |||||||| ||||||||||||| Sbjct: 290 ccccggccgcggccaccatcgcggtcggggacaagctccccgacgcgacgctctcctact 349 Query: 182 tcgacccagccgacggcgagctgaagacggtgacggtcggcgacctcacggcggggaaga 241 ||||| | ||||||| ||||||||||||||||| || |||||||||| || ||||||| Sbjct: 350 tcgactcgcccgacggggagctgaagacggtgaccgtgcgcgacctcaccgccgggaaga 409 Query: 242 aggtcgtgctcttcgctgtcccgggcgccttcaccccgacctgctcgcagaagcacctgc 301 |||| || |||||||| ||||| ||||| ||||||||||||||| ||||||||||| | | Sbjct: 410 aggtggtcctcttcgcggtccccggcgcgttcaccccgacctgcacgcagaagcacgtcc 469 Query: 302 cggggttcgtcgagaaggcgggcgagctgcgcgccaagggggtggacaccgtggcgtgcg 361 |||||||||||| ||||| || ||||| |||||||||||||| ||| ||||||| |||| Sbjct: 470 cggggttcgtcgccaaggccggggagctccgcgccaagggggtcgacgccgtggcctgcg 529 Query: 362 tctcggtgaacgacgccttcgtgatgaaggcgtggaaggagagcctcggcctcggcgacg 421 |||| || |||||||| ||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 530 tctccgtcaacgacgcgttcgtgatgcgggcgtggaaggagagcctcggcgtcggcgacg 589 Query: 422 acgtgct 428 | ||||| Sbjct: 590 aggtgct 596
>dbj|AK058459.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-H12, full insert sequence Length = 1248 Score = 315 bits (159), Expect = 7e-83 Identities = 270/307 (87%) Strand = Plus / Plus Query: 122 ccccggtcgtggccaccatcgcggtcggcgacaagctgcccgacgccacgctctcctact 181 |||||| || |||||||||||||||||| |||||||| |||||||| ||||||||||||| Sbjct: 289 ccccggccgcggccaccatcgcggtcggggacaagctccccgacgcgacgctctcctact 348 Query: 182 tcgacccagccgacggcgagctgaagacggtgacggtcggcgacctcacggcggggaaga 241 ||||| | ||||||| ||||||||||||||||| || |||||||||| || ||||||| Sbjct: 349 tcgactcgcccgacggggagctgaagacggtgaccgtgcgcgacctcaccgccgggaaga 408 Query: 242 aggtcgtgctcttcgctgtcccgggcgccttcaccccgacctgctcgcagaagcacctgc 301 |||| || |||||||| ||||| ||||| ||||||||||||||| ||||||||||| | | Sbjct: 409 aggtggtcctcttcgcggtccccggcgcgttcaccccgacctgcacgcagaagcacgtcc 468 Query: 302 cggggttcgtcgagaaggcgggcgagctgcgcgccaagggggtggacaccgtggcgtgcg 361 |||||||||||| ||||| || ||||| |||||||||||||| ||| ||||||| |||| Sbjct: 469 cggggttcgtcgccaaggccggggagctccgcgccaagggggtcgacgccgtggcctgcg 528 Query: 362 tctcggtgaacgacgccttcgtgatgaaggcgtggaaggagagcctcggcctcggcgacg 421 |||| || |||||||| ||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 529 tctccgtcaacgacgcgttcgtgatgcgggcgtggaaggagagcctcggcgtcggcgacg 588 Query: 422 acgtgct 428 | ||||| Sbjct: 589 aggtgct 595
>ref|XM_464429.1| Oryza sativa (japonica cultivar-group), mRNA Length = 912 Score = 264 bits (133), Expect = 2e-67 Identities = 268/313 (85%) Strand = Plus / Plus Query: 109 gcggcatcggcatccccggtcgtggccaccatcgcggtcggcgacaagctgcccgacgcc 168 ||||| ||||| ||| | || ||||| |||||||| ||||| |||||||| |||||||| Sbjct: 210 gcggcgtcggcgtccaccgtggtggcgaccatcgccgtcggagacaagctccccgacgcg 269 Query: 169 acgctctcctacttcgacccagccgacggcgagctgaagacggtgacggtcggcgacctc 228 ||||| |||||||||||||| || |||||||||||||||||||||||||| | || || Sbjct: 270 acgctgtcctacttcgacccggcggacggcgagctgaagacggtgacggtggcggagctg 329 Query: 229 acggcggggaagaaggtcgtgctcttcgctgtcccgggcgccttcaccccgacctgctcg 288 |||||||| | ||||| ||||| ||||| || || ||||| ||||| ||||| |||||| Sbjct: 330 acggcgggcaggaaggcggtgctgttcgcggtgcccggcgcgttcacgccgacgtgctcg 389 Query: 289 cagaagcacctgccggggttcgtcgagaaggcgggcgagctgcgcgccaagggggtggac 348 ||||||||||| ||||||||| |||||||||| || ||||| | |||||||||||||||| Sbjct: 390 cagaagcacctcccggggttcatcgagaaggccggggagctccacgccaagggggtggac 449 Query: 349 accgtggcgtgcgtctcggtgaacgacgccttcgtgatgaaggcgtggaaggagagcctc 408 || | || ||||| |||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 450 gccattgcctgcgtgtcggtgaacgacgcgttcgtgatgcgcgcgtggaaggagagcctg 509 Query: 409 ggcctcggcgacg 421 ||||||||||||| Sbjct: 510 ggcctcggcgacg 522
>ref|XM_506741.1| PREDICTED Oryza sativa (japonica cultivar-group), P0453H10.33 mRNA Length = 994 Score = 264 bits (133), Expect = 2e-67 Identities = 268/313 (85%) Strand = Plus / Plus Query: 109 gcggcatcggcatccccggtcgtggccaccatcgcggtcggcgacaagctgcccgacgcc 168 ||||| ||||| ||| | || ||||| |||||||| ||||| |||||||| |||||||| Sbjct: 208 gcggcgtcggcgtccaccgtggtggcgaccatcgccgtcggagacaagctccccgacgcg 267 Query: 169 acgctctcctacttcgacccagccgacggcgagctgaagacggtgacggtcggcgacctc 228 ||||| |||||||||||||| || |||||||||||||||||||||||||| | || || Sbjct: 268 acgctgtcctacttcgacccggcggacggcgagctgaagacggtgacggtggcggagctg 327 Query: 229 acggcggggaagaaggtcgtgctcttcgctgtcccgggcgccttcaccccgacctgctcg 288 |||||||| | ||||| ||||| ||||| || || ||||| ||||| ||||| |||||| Sbjct: 328 acggcgggcaggaaggcggtgctgttcgcggtgcccggcgcgttcacgccgacgtgctcg 387 Query: 289 cagaagcacctgccggggttcgtcgagaaggcgggcgagctgcgcgccaagggggtggac 348 ||||||||||| ||||||||| |||||||||| || ||||| | |||||||||||||||| Sbjct: 388 cagaagcacctcccggggttcatcgagaaggccggggagctccacgccaagggggtggac 447 Query: 349 accgtggcgtgcgtctcggtgaacgacgccttcgtgatgaaggcgtggaaggagagcctc 408 || | || ||||| |||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 448 gccattgcctgcgtgtcggtgaacgacgcgttcgtgatgcgcgcgtggaaggagagcctg 507 Query: 409 ggcctcggcgacg 421 ||||||||||||| Sbjct: 508 ggcctcggcgacg 520
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 264 bits (133), Expect = 2e-67 Identities = 268/313 (85%) Strand = Plus / Minus Query: 109 gcggcatcggcatccccggtcgtggccaccatcgcggtcggcgacaagctgcccgacgcc 168 ||||| ||||| ||| | || ||||| |||||||| ||||| |||||||| |||||||| Sbjct: 5167781 gcggcgtcggcgtccaccgtggtggcgaccatcgccgtcggagacaagctccccgacgcg 5167722 Query: 169 acgctctcctacttcgacccagccgacggcgagctgaagacggtgacggtcggcgacctc 228 ||||| |||||||||||||| || |||||||||||||||||||||||||| | || || Sbjct: 5167721 acgctgtcctacttcgacccggcggacggcgagctgaagacggtgacggtggcggagctg 5167662 Query: 229 acggcggggaagaaggtcgtgctcttcgctgtcccgggcgccttcaccccgacctgctcg 288 |||||||| | ||||| ||||| ||||| || || ||||| ||||| ||||| |||||| Sbjct: 5167661 acggcgggcaggaaggcggtgctgttcgcggtgcccggcgcgttcacgccgacgtgctcg 5167602 Query: 289 cagaagcacctgccggggttcgtcgagaaggcgggcgagctgcgcgccaagggggtggac 348 ||||||||||| ||||||||| |||||||||| || ||||| | |||||||||||||||| Sbjct: 5167601 cagaagcacctcccggggttcatcgagaaggccggggagctccacgccaagggggtggac 5167542 Query: 349 accgtggcgtgcgtctcggtgaacgacgccttcgtgatgaaggcgtggaaggagagcctc 408 || | || ||||| |||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 5167541 gccattgcctgcgtgtcggtgaacgacgcgttcgtgatgcgcgcgtggaaggagagcctg 5167482 Query: 409 ggcctcggcgacg 421 ||||||||||||| Sbjct: 5167481 ggcctcggcgacg 5167469
>dbj|AP005785.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0453H10 Length = 133464 Score = 264 bits (133), Expect = 2e-67 Identities = 268/313 (85%) Strand = Plus / Minus Query: 109 gcggcatcggcatccccggtcgtggccaccatcgcggtcggcgacaagctgcccgacgcc 168 ||||| ||||| ||| | || ||||| |||||||| ||||| |||||||| |||||||| Sbjct: 128279 gcggcgtcggcgtccaccgtggtggcgaccatcgccgtcggagacaagctccccgacgcg 128220 Query: 169 acgctctcctacttcgacccagccgacggcgagctgaagacggtgacggtcggcgacctc 228 ||||| |||||||||||||| || |||||||||||||||||||||||||| | || || Sbjct: 128219 acgctgtcctacttcgacccggcggacggcgagctgaagacggtgacggtggcggagctg 128160 Query: 229 acggcggggaagaaggtcgtgctcttcgctgtcccgggcgccttcaccccgacctgctcg 288 |||||||| | ||||| ||||| ||||| || || ||||| ||||| ||||| |||||| Sbjct: 128159 acggcgggcaggaaggcggtgctgttcgcggtgcccggcgcgttcacgccgacgtgctcg 128100 Query: 289 cagaagcacctgccggggttcgtcgagaaggcgggcgagctgcgcgccaagggggtggac 348 ||||||||||| ||||||||| |||||||||| || ||||| | |||||||||||||||| Sbjct: 128099 cagaagcacctcccggggttcatcgagaaggccggggagctccacgccaagggggtggac 128040 Query: 349 accgtggcgtgcgtctcggtgaacgacgccttcgtgatgaaggcgtggaaggagagcctc 408 || | || ||||| |||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 128039 gccattgcctgcgtgtcggtgaacgacgcgttcgtgatgcgcgcgtggaaggagagcctg 127980 Query: 409 ggcctcggcgacg 421 ||||||||||||| Sbjct: 127979 ggcctcggcgacg 127967
>dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0437H03 Length = 170173 Score = 264 bits (133), Expect = 2e-67 Identities = 268/313 (85%) Strand = Plus / Minus Query: 109 gcggcatcggcatccccggtcgtggccaccatcgcggtcggcgacaagctgcccgacgcc 168 ||||| ||||| ||| | || ||||| |||||||| ||||| |||||||| |||||||| Sbjct: 61234 gcggcgtcggcgtccaccgtggtggcgaccatcgccgtcggagacaagctccccgacgcg 61175 Query: 169 acgctctcctacttcgacccagccgacggcgagctgaagacggtgacggtcggcgacctc 228 ||||| |||||||||||||| || |||||||||||||||||||||||||| | || || Sbjct: 61174 acgctgtcctacttcgacccggcggacggcgagctgaagacggtgacggtggcggagctg 61115 Query: 229 acggcggggaagaaggtcgtgctcttcgctgtcccgggcgccttcaccccgacctgctcg 288 |||||||| | ||||| ||||| ||||| || || ||||| ||||| ||||| |||||| Sbjct: 61114 acggcgggcaggaaggcggtgctgttcgcggtgcccggcgcgttcacgccgacgtgctcg 61055 Query: 289 cagaagcacctgccggggttcgtcgagaaggcgggcgagctgcgcgccaagggggtggac 348 ||||||||||| ||||||||| |||||||||| || ||||| | |||||||||||||||| Sbjct: 61054 cagaagcacctcccggggttcatcgagaaggccggggagctccacgccaagggggtggac 60995 Query: 349 accgtggcgtgcgtctcggtgaacgacgccttcgtgatgaaggcgtggaaggagagcctc 408 || | || ||||| |||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 60994 gccattgcctgcgtgtcggtgaacgacgcgttcgtgatgcgcgcgtggaaggagagcctg 60935 Query: 409 ggcctcggcgacg 421 ||||||||||||| Sbjct: 60934 ggcctcggcgacg 60922
>dbj|AK065909.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043E11, full insert sequence Length = 912 Score = 264 bits (133), Expect = 2e-67 Identities = 268/313 (85%) Strand = Plus / Plus Query: 109 gcggcatcggcatccccggtcgtggccaccatcgcggtcggcgacaagctgcccgacgcc 168 ||||| ||||| ||| | || ||||| |||||||| ||||| |||||||| |||||||| Sbjct: 210 gcggcgtcggcgtccaccgtggtggcgaccatcgccgtcggagacaagctccccgacgcg 269 Query: 169 acgctctcctacttcgacccagccgacggcgagctgaagacggtgacggtcggcgacctc 228 ||||| |||||||||||||| || |||||||||||||||||||||||||| | || || Sbjct: 270 acgctgtcctacttcgacccggcggacggcgagctgaagacggtgacggtggcggagctg 329 Query: 229 acggcggggaagaaggtcgtgctcttcgctgtcccgggcgccttcaccccgacctgctcg 288 |||||||| | ||||| ||||| ||||| || || ||||| ||||| ||||| |||||| Sbjct: 330 acggcgggcaggaaggcggtgctgttcgcggtgcccggcgcgttcacgccgacgtgctcg 389 Query: 289 cagaagcacctgccggggttcgtcgagaaggcgggcgagctgcgcgccaagggggtggac 348 ||||||||||| ||||||||| |||||||||| || ||||| | |||||||||||||||| Sbjct: 390 cagaagcacctcccggggttcatcgagaaggccggggagctccacgccaagggggtggac 449 Query: 349 accgtggcgtgcgtctcggtgaacgacgccttcgtgatgaaggcgtggaaggagagcctc 408 || | || ||||| |||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 450 gccattgcctgcgtgtcggtgaacgacgcgttcgtgatgcgcgcgtggaaggagagcctg 509 Query: 409 ggcctcggcgacg 421 ||||||||||||| Sbjct: 510 ggcctcggcgacg 522
>dbj|AK061629.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-H06, full insert sequence Length = 994 Score = 264 bits (133), Expect = 2e-67 Identities = 268/313 (85%) Strand = Plus / Plus Query: 109 gcggcatcggcatccccggtcgtggccaccatcgcggtcggcgacaagctgcccgacgcc 168 ||||| ||||| ||| | || ||||| |||||||| ||||| |||||||| |||||||| Sbjct: 208 gcggcgtcggcgtccaccgtggtggcgaccatcgccgtcggagacaagctccccgacgcg 267 Query: 169 acgctctcctacttcgacccagccgacggcgagctgaagacggtgacggtcggcgacctc 228 ||||| |||||||||||||| || |||||||||||||||||||||||||| | || || Sbjct: 268 acgctgtcctacttcgacccggcggacggcgagctgaagacggtgacggtggcggagctg 327 Query: 229 acggcggggaagaaggtcgtgctcttcgctgtcccgggcgccttcaccccgacctgctcg 288 |||||||| | ||||| ||||| ||||| || || ||||| ||||| ||||| |||||| Sbjct: 328 acggcgggcaggaaggcggtgctgttcgcggtgcccggcgcgttcacgccgacgtgctcg 387 Query: 289 cagaagcacctgccggggttcgtcgagaaggcgggcgagctgcgcgccaagggggtggac 348 ||||||||||| ||||||||| |||||||||| || ||||| | |||||||||||||||| Sbjct: 388 cagaagcacctcccggggttcatcgagaaggccggggagctccacgccaagggggtggac 447 Query: 349 accgtggcgtgcgtctcggtgaacgacgccttcgtgatgaaggcgtggaaggagagcctc 408 || | || ||||| |||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 448 gccattgcctgcgtgtcggtgaacgacgcgttcgtgatgcgcgcgtggaaggagagcctg 507 Query: 409 ggcctcggcgacg 421 ||||||||||||| Sbjct: 508 ggcctcggcgacg 520
>gb|AY106451.1| Zea mays PCO082226 mRNA sequence Length = 1137 Score = 246 bits (124), Expect = 5e-62 Identities = 267/315 (84%), Gaps = 6/315 (1%) Strand = Plus / Plus Query: 136 accatcgcggtcggcgacaagctgcccgacgccacgctctcctacttcgacccagcc--- 192 |||||||||||||| ||| ||| || ||||| |||||||||||||||||| | || Sbjct: 291 accatcgcggtcggggaccggctccctgacgcgacgctctcctacttcgacacgtcctcc 350 Query: 193 ---gacggcgagctgaagacggtgacggtcggcgacctcacggcggggaagaaggtcgtg 249 ||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||| Sbjct: 351 cccgacggcgagctgaagacggtgacggtccgcgacctcaccgcggggaagaaggtggtg 410 Query: 250 ctcttcgctgtcccgggcgccttcaccccgacctgctcgcagaagcacctgccggggttc 309 |||||||| || || ||||| ||||| || |||||| | ||||||||||| ||||||||| Sbjct: 411 ctcttcgccgtgcccggcgcgttcacgcccacctgcacccagaagcacctcccggggttc 470 Query: 310 gtcgagaaggcgggcgagctgcgcgccaagggggtggacaccgtggcgtgcgtctcggtg 369 || | ||||| || ||||| ||||||||||| || ||||||||||| |||||||| || Sbjct: 471 gtggccaaggccggggagctccgcgccaagggcgtcgacaccgtggcctgcgtctccgtc 530 Query: 370 aacgacgccttcgtgatgaaggcgtggaaggagagcctcggcctcggcgacgacgtgctg 429 |||||||||||||||||| |||||||||||||| || || |||| ||||| |||||| Sbjct: 531 aacgacgccttcgtgatgcgcgcgtggaaggagagtctggggatcggggacgaggtgctg 590 Query: 430 ctgctgtcggacggc 444 || |||||||||||| Sbjct: 591 ctcctgtcggacggc 605
>gb|AY796053.1| Saccharum officinarum putative thioredoxin peroxidase 1 mRNA, complete cds Length = 551 Score = 123 bits (62), Expect = 5e-25 Identities = 110/126 (87%) Strand = Plus / Plus Query: 319 gcgggcgagctgcgcgccaagggggtggacaccgtggcgtgcgtctcggtgaacgacgcc 378 |||||||||||| || ||||| ||||| |||||||||||||| || ||||||||||| Sbjct: 1 gcgggcgagctgaaggcgaagggcgtggagaccgtggcgtgcgtgtccgtgaacgacgcg 60 Query: 379 ttcgtgatgaaggcgtggaaggagagcctcggcctcggcgacgacgtgctgctgctgtcg 438 |||||||||||||||||||||||| || || || || ||||||||||||||||||||| Sbjct: 61 ttcgtgatgaaggcgtggaaggagtcgctggggctgggtgacgacgtgctgctgctgtcg 120 Query: 439 gacggc 444 |||||| Sbjct: 121 gacggc 126
>gb|AE006000.1| Caulobacter crescentus CB15 section 326 of 359 of the complete genome Length = 12299 Score = 79.8 bits (40), Expect = 7e-12 Identities = 106/128 (82%) Strand = Plus / Minus Query: 265 ggcgccttcaccccgacctgctcgcagaagcacctgccggggttcgtcgagaaggcgggc 324 |||||||||||||||||||||||| |||||||||||||| ||| || ||||| | | Sbjct: 2340 ggcgccttcaccccgacctgctcggccaagcacctgccgggcttcaaggaaaaggccgac 2281 Query: 325 gagctgcgcgccaagggggtggacaccgtggcgtgcgtctcggtgaacgacgccttcgtg 384 |||||| |||||||| |||||| | | | ||||||||||| ||||||| ||||||| Sbjct: 2280 gagctgaaggccaagggcgtggactcgatcgtctgcgtctcggtcaacgacgtcttcgtg 2221 Query: 385 atgaaggc 392 |||||||| Sbjct: 2220 atgaaggc 2213
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 69.9 bits (35), Expect = 7e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 238 aagaaggtcgtgctcttcgctgtcccgggcgccttcaccccgacctgctcgcagaagcac 297 |||||||||| || ||| | ||||| ||||| |||||||||||||||||| |||||| Sbjct: 2139206 aagaaggtcgccctgttctccgtccccggcgcgttcaccccgacctgctcggccaagcac 2139265 Query: 298 ctgccggggttcgtcgagaaggc 320 |||||||| | |||||||||||| Sbjct: 2139266 ctgccgggctacgtcgagaaggc 2139288
>gb|AY389777.1| Hyacinthus orientalis peroxiredoxin mRNA, partial cds Length = 728 Score = 63.9 bits (32), Expect = 4e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 307 ttcgtcgagaaggcgggcgagctgcgcgccaagggggtggacaccgtggcgtgcgtctcg 366 |||||||||||||| ||||||||| ||||||||||| |||||| | || ||| | || Sbjct: 81 ttcgtcgagaaggccggcgagctgaaggccaagggggtcgacaccatcgcctgcatttcc 140 Query: 367 gtgaacgacgccttcgtgatgaaggcgtggaaggag 402 || ||||| || ||||| |||||||| ||||||||| Sbjct: 141 gtcaacgatgcattcgtcatgaaggcttggaaggag 176
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 247 gtgctcttcgctgtcccgggcgccttcaccccgacctgctcgcagaagcacctgcc 302 |||||||| || || ||||||||||||||||| |||||||||| ||| |||||||| Sbjct: 1015461 gtgctctttgccgtgccgggcgccttcacccccacctgctcgctgaaccacctgcc 1015516 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 gcggtcggcgacaagctgcc 161 |||||||||||||||||||| Sbjct: 350867 gcggtcggcgacaagctgcc 350848
>ref|XM_306217.1| Anopheles gambiae str. PEST ENSANGP00000000020 (ENSANGG00000000020), partial mRNA Length = 453 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 364 tcggtgaacgacgccttcgtgatgaaggcgtggaagga 401 ||||| ||||||||||||||||||||||||||| |||| Sbjct: 202 tcggtcaacgacgccttcgtgatgaaggcgtggcagga 239
>ref|NM_191997.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 489 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 238 aagaaggtcgtgctcttcgctgtcccgggcgccttcaccccgacctgc 285 ||||||||||| ||||||| ||||| || |||||||||||||||||| Sbjct: 106 aagaaggtcgtcctcttcggcgtccccggtgccttcaccccgacctgc 153
>gb|AE009045.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 71 of 256 of the complete sequence Length = 10844 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 238 aagaaggtcgtgctcttcgctgtcccgggcgccttcaccccgacctgctcgcagaagcac 297 |||||||| || ||||| || || || |||||||||||||| |||||||||| ||| || Sbjct: 3711 aagaaggtggtcctctttgccgttcccggcgccttcacccccacctgctcgctgaaccat 3652 Query: 298 ctgccggg 305 |||||||| Sbjct: 3651 ctgccggg 3644
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 238 aagaaggtcgtgctcttcgctgtcccgggcgccttcaccccgacctgctcgcagaagcac 297 |||||||| || ||||| || || || |||||||||||||| |||||||||| ||| || Sbjct: 775846 aagaaggtggtcctctttgccgttcccggcgccttcacccccacctgctcgctgaaccat 775787 Query: 298 ctgccggg 305 |||||||| Sbjct: 775786 ctgccggg 775779 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 364 tcggtgaacgacgccttcgtgatgaa 389 ||||| |||||||||||||||||||| Sbjct: 2371734 tcggtcaacgacgccttcgtgatgaa 2371709 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 265 ggcgccttcaccccgacctgctcg 288 ||||| |||||||||||||||||| Sbjct: 2371833 ggcgctttcaccccgacctgctcg 2371810
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 238 aagaaggtcgtgctcttcgctgtcccgggcgccttcaccccgacctgc 285 ||||||||||| ||||||| ||||| || |||||||||||||||||| Sbjct: 27740943 aagaaggtcgtcctcttcggcgtccccggtgccttcaccccgacctgc 27740896
>gb|AF203879.1|AF203879 Oryza sativa peroxiredoxin mRNA, complete cds Length = 626 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 238 aagaaggtcgtgctcttcgctgtcccgggcgccttcaccccgacctgc 285 ||||||||||| ||||||| ||||| || |||||||||||||||||| Sbjct: 145 aagaaggtcgtcctcttcggcgtccccggtgccttcaccccgacctgc 192
>dbj|AP003374.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1117_G01 Length = 125454 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 238 aagaaggtcgtgctcttcgctgtcccgggcgccttcaccccgacctgc 285 ||||||||||| ||||||| ||||| || |||||||||||||||||| Sbjct: 32998 aagaaggtcgtcctcttcggcgtccccggtgccttcaccccgacctgc 32951
>dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485G01 Length = 167203 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 238 aagaaggtcgtgctcttcgctgtcccgggcgccttcaccccgacctgc 285 ||||||||||| ||||||| ||||| || |||||||||||||||||| Sbjct: 149509 aagaaggtcgtcctcttcggcgtccccggtgccttcaccccgacctgc 149462
>dbj|AK058509.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-G06, full insert sequence Length = 770 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 238 aagaaggtcgtgctcttcgctgtcccgggcgccttcaccccgacctgc 285 ||||||||||| ||||||| ||||| || |||||||||||||||||| Sbjct: 203 aagaaggtcgtcctcttcggcgtccccggtgccttcaccccgacctgc 250
>gb|AY107305.1| Zea mays PCO096955 mRNA sequence Length = 820 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 238 aagaaggtcgtgctcttcgctgtcccgggcgccttcaccccgacctgc 285 ||||||||| | ||||||| ||||| ||||||||||||||||||||| Sbjct: 185 aagaaggtcatcctcttcggcgtccccggcgccttcaccccgacctgc 232
>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16 Length = 348624 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 253 ttcgctgtcccgggcgccttcaccccgacctgctcgcagaagcacctgccggggttcgtc 312 ||||| || |||||||| ||||| |||||||||||| ||||||||||| || | ||| Sbjct: 32992 ttcgccgtgccgggcgcgttcacgccgacctgctcggccaagcacctgcccggctatgtc 33051 Query: 313 gagaaggcgggcgagctgcgcgccaagggg 342 ||| |||| | | |||||||||||||||| Sbjct: 33052 gagcaggccgcggcgctgcgcgccaagggg 33081
>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14 Length = 348866 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 253 ttcgctgtcccgggcgccttcaccccgacctgctcgcagaagcacctgccggggttcgtc 312 ||||| || |||||||| ||||| |||||||||||| ||||||||||| || | ||| Sbjct: 146154 ttcgccgtgccgggcgcgttcacgccgacctgctcggccaagcacctgcccggctatgtc 146213 Query: 313 gagaaggcgggcgagctgcgcgccaagggg 342 ||| |||| | | |||||||||||||||| Sbjct: 146214 gagcaggccgcggcgctgcgcgccaagggg 146243
>gb|AE012201.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 109 of 460 of the complete genome Length = 10790 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 241 aaggtcgtgctcttcgctgtcccgggcgccttcaccccgacctgctcgcagaagcacctg 300 ||||| ||||| ||||| || ||||||||||| || |||||||||||| ||||||||| Sbjct: 10581 aaggtggtgctgttcgcggtaccgggcgcctttacgccgacctgctcggccaagcacctg 10522 Query: 301 cc 302 || Sbjct: 10521 cc 10520 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 365 cggtgaacgacgccttcgtgatgaaggc 392 ||||||||||| ||||||||||| |||| Sbjct: 10460 cggtgaacgaccccttcgtgatgcaggc 10433
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 241 aaggtcgtgctcttcgctgtcccgggcgccttcaccccgacctgctcgcagaagcacctg 300 ||||| ||||| ||||| || ||||||||||| || |||||||||||| ||||||||| Sbjct: 3834599 aaggtggtgctgttcgcggtaccgggcgcctttacgccgacctgctcggccaagcacctg 3834658 Query: 301 cc 302 || Sbjct: 3834659 cc 3834660 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 365 cggtgaacgacgccttcgtgatgaaggc 392 ||||||||||| ||||||||||| |||| Sbjct: 3834720 cggtgaacgaccccttcgtgatgcaggc 3834747
>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12 Length = 349672 Score = 50.1 bits (25), Expect = 0.006 Identities = 73/89 (82%) Strand = Plus / Plus Query: 253 ttcgctgtcccgggcgccttcaccccgacctgctcgcagaagcacctgccggggttcgtc 312 ||||| || |||||||| ||||| |||||||||||| ||||||||||| || | ||| Sbjct: 100306 ttcgccgtgccgggcgcgttcacgccgacctgctcggccaagcacctgcccggctatgtc 100365 Query: 313 gagaaggcgggcgagctgcgcgccaaggg 341 ||| |||| | | ||||||||||||||| Sbjct: 100366 gagcaggccgcggcgctgcgcgccaaggg 100394
>emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genome; segment 14/16 Length = 349841 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 360 cgtctcggtgaacgacgccttcgtgatga 388 ||||||||| ||||||||||||||||||| Sbjct: 279839 cgtctcggtcaacgacgccttcgtgatga 279867
>ref|XM_959107.1| Neurospora crassa OR74A hypothetical protein (NCU03151.1) partial mRNA Length = 417 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Plus Query: 238 aagaaggtcgtgctcttcgctgtcccgggcgccttcaccccgacctgc 285 ||||||||||| ||| |||| ||||| || ||||||||||| |||||| Sbjct: 49 aagaaggtcgtcctcgtcgccgtccccggtgccttcacccccacctgc 96
>ref|XM_330586.1| Neurospora crassa OR74A hypothetical protein (NCU03151.1) partial mRNA Length = 417 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Plus Query: 238 aagaaggtcgtgctcttcgctgtcccgggcgccttcaccccgacctgc 285 ||||||||||| ||| |||| ||||| || ||||||||||| |||||| Sbjct: 49 aagaaggtcgtcctcgtcgccgtccccggtgccttcacccccacctgc 96
>emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete chromosome; segment 9/12 Length = 323450 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Minus Query: 358 tgcgtctcggtgaacgacgccttcgtgatgaa 389 |||||||| || |||||||||||||||||||| Sbjct: 276820 tgcgtctccgtcaacgacgccttcgtgatgaa 276789
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 364 tcggtgaacgacgccttcgtgatgaaggcgtggaag 399 ||||| |||||||||||||||||||| || |||||| Sbjct: 4476577 tcggtcaacgacgccttcgtgatgaacgcctggaag 4476612 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 ctcggcctcggcgacgacgt 425 |||||||||||||||||||| Sbjct: 2078635 ctcggcctcggcgacgacgt 2078616
>emb|BX842637.1| Neurospora crassa DNA linkage group I cosmid contig 5C2 Length = 98769 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Plus Query: 238 aagaaggtcgtgctcttcgctgtcccgggcgccttcaccccgacctgc 285 ||||||||||| ||| |||| ||||| || ||||||||||| |||||| Sbjct: 2801 aagaaggtcgtcctcgtcgccgtccccggtgccttcacccccacctgc 2848
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 360 cgtctcggtgaacgacgccttcgtgatg 387 ||||||||| |||||||||||||||||| Sbjct: 4529452 cgtctcggtcaacgacgccttcgtgatg 4529479 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 402 gagcctcggcctcggcgacga 422 ||||||||||||||||||||| Sbjct: 5377951 gagcctcggcctcggcgacga 5377931 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 394 tggaaggagagcctcggcctc 414 ||||||||||||||||||||| Sbjct: 2946404 tggaaggagagcctcggcctc 2946384
>ref|XM_450025.1| Oryza sativa (japonica cultivar-group), mRNA Length = 903 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Minus Query: 122 ccccggtcgtggccaccatcgcggtcg 148 |||||| |||||||||||||||||||| Sbjct: 675 ccccggccgtggccaccatcgcggtcg 649
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Minus Query: 358 tgcgtctcggtgaacgacgccttcgtgatgaaggc 392 ||||||||||| ||||| |||||||||||||||| Sbjct: 2649558 tgcgtctcggtcaacgatcccttcgtgatgaaggc 2649524 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Minus Query: 262 ccgggcgccttcaccccgacctgctcg 288 ||||||||||||||||| ||||||||| Sbjct: 1429860 ccgggcgccttcacccccacctgctcg 1429834
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Minus Query: 136 accatcgcggtcggcgacaagctgccc 162 ||||||||||| ||||||||||||||| Sbjct: 1289526 accatcgcggtaggcgacaagctgccc 1289500
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Minus Query: 262 ccgggcgccttcaccccgacctgctcg 288 |||||||||||||||||||| |||||| Sbjct: 1405041 ccgggcgccttcaccccgacgtgctcg 1405015
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 362 tctcggtgaacgacgccttcgtgatgaaggc 392 ||||||| ||||| ||||||||||||||||| Sbjct: 4254121 tctcggtaaacgatgccttcgtgatgaaggc 4254091
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Minus Query: 122 ccccggtcgtggccaccatcgcggtcg 148 |||||| |||||||||||||||||||| Sbjct: 1068433 ccccggccgtggccaccatcgcggtcg 1068407
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Minus Query: 411 cctcggcgacgacgtgctgctgc 433 ||||||||||||||||||||||| Sbjct: 2436145 cctcggcgacgacgtgctgctgc 2436123 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 419 acgacgtgctgctgctgtcggacg 442 |||||||||||||| ||||||||| Sbjct: 3210990 acgacgtgctgctggtgtcggacg 3211013
>dbj|AP005860.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1134_E08 Length = 153002 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Minus Query: 122 ccccggtcgtggccaccatcgcggtcg 148 |||||| |||||||||||||||||||| Sbjct: 106126 ccccggccgtggccaccatcgcggtcg 106100
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 357 gtgcgtctcggtgaacgacgccttcgtgatg 387 |||||| ||||| |||||||||||||||||| Sbjct: 3052878 gtgcgtgtcggtcaacgacgccttcgtgatg 3052848 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 265 ggcgccttcaccccgacctgctcg 288 ||||||||||| |||||||||||| Sbjct: 3052970 ggcgccttcacgccgacctgctcg 3052947
>gb|AY616104.1| Prototheca wickerhamii peroxiredoxin mRNA, partial cds Length = 463 Score = 46.1 bits (23), Expect = 0.097 Identities = 41/47 (87%) Strand = Plus / Plus Query: 334 gccaagggggtggacaccgtggcgtgcgtctcggtgaacgacgcctt 380 |||||||| ||||||||| | | ||||| ||||||||||||||||| Sbjct: 229 gccaagggcgtggacaccatcggctgcgtgtcggtgaacgacgcctt 275
>gb|AE009188.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 214 of 256 of the complete sequence Length = 10251 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 364 tcggtgaacgacgccttcgtgatgaa 389 ||||| |||||||||||||||||||| Sbjct: 1930 tcggtcaacgacgccttcgtgatgaa 1905 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 265 ggcgccttcaccccgacctgctcg 288 ||||| |||||||||||||||||| Sbjct: 2029 ggcgctttcaccccgacctgctcg 2006
>gb|AE011744.1| Xanthomonas axonopodis pv. citri str. 306, section 122 of 469 of the complete genome Length = 10963 Score = 44.1 bits (22), Expect = 0.38 Identities = 49/58 (84%) Strand = Plus / Minus Query: 248 tgctcttcgctgtcccgggcgccttcaccccgacctgctcgcagaagcacctgccggg 305 |||| ||||| || ||||| ||||| ||||| ||||||||| |||||||||||||| Sbjct: 5144 tgctgttcgcggtgccgggggcctttacccccacctgctcggccaagcacctgccggg 5087
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 44.1 bits (22), Expect = 0.38 Identities = 61/74 (82%) Strand = Plus / Plus Query: 238 aagaaggtcgtgctcttcgctgtcccgggcgccttcaccccgacctgctcgcagaagcac 297 |||||| ||||| |||||| || || |||||||||||||| ||||| ||| |||||| Sbjct: 43868 aagaagctcgtgatcttcggcgtgcccggcgccttcacccctacctgttcggtcaagcac 43927 Query: 298 ctgccggggttcgt 311 ||||| || ||||| Sbjct: 43928 ctgcctggcttcgt 43941
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 44.1 bits (22), Expect = 0.38 Identities = 52/62 (83%) Strand = Plus / Minus Query: 259 gtcccgggcgccttcaccccgacctgctcgcagaagcacctgccggggttcgtcgagaag 318 ||||| || ||||| ||||||||||||||| ||||||||||| || | ||||||||| Sbjct: 1035230 gtccccggtgcctttaccccgacctgctcggcaaagcacctgcccggctatgtcgagaag 1035171 Query: 319 gc 320 || Sbjct: 1035170 gc 1035169
>gb|AY540995.1| Achromobacter xylosoxidans subsp. denitrificans strain EST4002 plasmid pEST4011, complete sequence Length = 76958 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 316 aaggcgggcgagctgcgcgccaagg 340 ||||||| ||||||||||||||||| Sbjct: 5826 aaggcggccgagctgcgcgccaagg 5802
>ref|XM_368384.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00860.4) partial mRNA Length = 945 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 360 cgtctcggtgaacgacgccttcgtgatgaaggc 392 ||||||||| ||||||||||| || |||||||| Sbjct: 681 cgtctcggtcaacgacgcctttgttatgaaggc 713
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 cggcgacaagctgcccgacgc 167 ||||||||||||||||||||| Sbjct: 166988 cggcgacaagctgcccgacgc 167008
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 404 gcctcggcctcggcgacgacg 424 ||||||||||||||||||||| Sbjct: 569347 gcctcggcctcggcgacgacg 569367
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 151 gacaagctgcccgacgccacgctct 175 ||||||||||||||||| ||||||| Sbjct: 4335841 gacaagctgcccgacgcaacgctct 4335817
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 357 gtgcgtctcggtgaacgacgccttcgtgatgaa 389 |||||| ||||| |||||| ||||||||||||| Sbjct: 1114263 gtgcgtgtcggtcaacgacaccttcgtgatgaa 1114231 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 265 ggcgccttcaccccgacctgctcg 288 ||||||||||| |||||||||||| Sbjct: 1114355 ggcgccttcacgccgacctgctcg 1114332
>emb|BX016489.1|CNS08KVX Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA24DB01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 495 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 tccgcggcatcggcatccccg 126 ||||||||||||||||||||| Sbjct: 72 tccgcggcatcggcatccccg 52
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 404 gcctcggcctcggcgacgacg 424 ||||||||||||||||||||| Sbjct: 377999 gcctcggcctcggcgacgacg 378019
>emb|AL672114.1|MLO672114 Mesorhizobium loti R7A symbiosis island; segment 3/4 Length = 149050 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 268 gccttcaccccgacctgctcg 288 ||||||||||||||||||||| Sbjct: 103530 gccttcaccccgacctgctcg 103550
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 210 ggtgacggtcggcgacctcacggcg 234 ||||||||||||||| ||||||||| Sbjct: 1436537 ggtgacggtcggcgatctcacggcg 1436561
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Minus Query: 233 cggggaagaaggtcgtgctcttcgctgtcccgggcgccttcaccccgacctgc 285 |||| |||||||| || || |||| ||| || ||||||||||| ||||||||| Sbjct: 6196637 cgggcaagaaggtggttctgttcggtgttcccggcgccttcacgccgacctgc 6196585 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 268 gccttcaccccgacctgctcg 288 ||||||||||||||||||||| Sbjct: 4743982 gccttcaccccgacctgctcg 4743962
>ref|XM_311208.2| Anopheles gambiae str. PEST ENSANGP00000019075 (ENSANGG00000016586), partial mRNA Length = 1248 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 tccgcggcatcggcatccccg 126 ||||||||||||||||||||| Sbjct: 1049 tccgcggcatcggcatccccg 1069
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 357 gtgcgtctcggtgaacgacgccttcgtgatgaa 389 |||||||||||||||||| ||||| || ||||| Sbjct: 3091683 gtgcgtctcggtgaacgatgcctttgtcatgaa 3091715
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 357 gtgcgtctcggtgaacgacgccttcgtgatgaa 389 |||||| ||||| |||||| ||||||||||||| Sbjct: 2219145 gtgcgtatcggtcaacgacaccttcgtgatgaa 2219177
>emb|AL590444.1|CNS07EGB chromosome IV of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 218329 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 383 tgatgaaggcgtggaaggaga 403 ||||||||||||||||||||| Sbjct: 41130 tgatgaaggcgtggaaggaga 41110
>gb|DQ065837.1| Burkholderia cepacia strain 2a plasmid pIJB1, complete sequence Length = 99448 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 316 aaggcgggcgagctgcgcgccaagg 340 ||||||| ||||||||||||||||| Sbjct: 54628 aaggcggccgagctgcgcgccaagg 54604
>dbj|D30738.1|AMLAAAR Amycolatopsis sp. Aaar gene for N-acylamino acid racemase, complete cds Length = 1400 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 413 tcggcgacgacgtgctgctgc 433 ||||||||||||||||||||| Sbjct: 600 tcggcgacgacgtgctgctgc 620
>ref|NM_194947.1| Oryza sativa (japonica cultivar-group) putative senescence-associated protein 15 (OSJNBa0036D19.6), mRNA Length = 1797 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 gagcctcggcctcggcgacg 421 |||||||||||||||||||| Sbjct: 1290 gagcctcggcctcggcgacg 1309
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 gccaccatcgcggtcggcga 152 |||||||||||||||||||| Sbjct: 3863102 gccaccatcgcggtcggcga 3863121
>gb|AY568293.1| Crithidia fasciculata paraflagellar rod protein (PFR2) mRNA, complete cds Length = 2632 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 cgagaaggcgggcgagctgc 331 |||||||||||||||||||| Sbjct: 406 cgagaaggcgggcgagctgc 425
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 406 ctcggcctcggcgacgacgtgctg 429 |||||||||||||| ||||||||| Sbjct: 3110897 ctcggcctcggcgaggacgtgctg 3110874
>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13 Length = 349606 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 gccaccatcgcggtcggcga 152 |||||||||||||||||||| Sbjct: 59978 gccaccatcgcggtcggcga 59997
>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16 Length = 348642 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 265 ggcgccttcaccccgacctgctcg 288 ||||||||||| |||||||||||| Sbjct: 84311 ggcgccttcacgccgacctgctcg 84288
>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14 Length = 346301 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 265 ggcgccttcaccccgacctgctcg 288 ||||||||||| |||||||||||| Sbjct: 157330 ggcgccttcacgccgacctgctcg 157307
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 ggcgccttcaccccgacctgctcg 288 ||||||||||| |||||||||||| Sbjct: 77791 ggcgccttcacgccgacctgctcg 77814
>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14 Length = 316050 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 gccaccatcgcggtcggcga 152 |||||||||||||||||||| Sbjct: 73854 gccaccatcgcggtcggcga 73873
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 408 cggcctcggcgacgacgtgctgct 431 ||||||||||| |||||||||||| Sbjct: 41961 cggcctcggcgtcgacgtgctgct 41938
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 414 cggcgacgacgtgctgctgctgtc 437 |||||||||| ||||||||||||| Sbjct: 3939786 cggcgacgacctgctgctgctgtc 3939763
>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 Length = 1841713 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 tccgcggcatcggcatcccc 125 |||||||||||||||||||| Sbjct: 327219 tccgcggcatcggcatcccc 327238
>gb|AC087723.3| Oryza sativa chromosome 10 clone OSJNBa0036D19, complete sequence Length = 144359 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 gagcctcggcctcggcgacg 421 |||||||||||||||||||| Sbjct: 72031 gagcctcggcctcggcgacg 72012
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 cggcgacaagctgcccgacg 166 |||||||||||||||||||| Sbjct: 3393120 cggcgacaagctgcccgacg 3393139
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 405 cctcggcctcggcgacgacg 424 |||||||||||||||||||| Sbjct: 1769722 cctcggcctcggcgacgacg 1769741
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 gagcctcggcctcggcgacg 421 |||||||||||||||||||| Sbjct: 3639190 gagcctcggcctcggcgacg 3639171
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 162 cgacgccacgctctcctacttcga 185 |||||||||||||||| ||||||| Sbjct: 3301631 cgacgccacgctctccgacttcga 3301608 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 262 ccgggcgccttcaccccgacctgctcgc 289 |||| ||||||||| ||||||||||||| Sbjct: 1047939 ccggacgccttcacgccgacctgctcgc 1047912
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 ctcggcctcggcgacgacgt 425 |||||||||||||||||||| Sbjct: 2686135 ctcggcctcggcgacgacgt 2686116
>ref|XM_310865.2| Anopheles gambiae str. PEST ENSANGP00000012597 (ENSANGG00000009998), partial mRNA Length = 2154 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 tcgcggtcggcgacaagctg 159 |||||||||||||||||||| Sbjct: 461 tcgcggtcggcgacaagctg 480
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 406 ctcggcctcggcgacgacgtgctg 429 |||||||||||| ||||||||||| Sbjct: 2499106 ctcggcctcggctacgacgtgctg 2499129
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 gagcctcggcctcggcgacg 421 |||||||||||||||||||| Sbjct: 3639111 gagcctcggcctcggcgacg 3639092 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,914,262 Number of Sequences: 3902068 Number of extensions: 2914262 Number of successful extensions: 53239 Number of sequences better than 10.0: 94 Number of HSP's better than 10.0 without gapping: 96 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 48413 Number of HSP's gapped (non-prelim): 4822 length of query: 444 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 422 effective length of database: 17,147,199,772 effective search space: 7236118303784 effective search space used: 7236118303784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
