| Clone Name | bast52b10 |
|---|---|
| Clone Library Name | barley_pub |
>MRCKG_MOUSE (Q80UW5) Serine/threonine-protein kinase MRCK gamma (EC 2.7.11.1)| (CDC42-binding protein kinase gamma) (Myotonic dystrophy kinase-related CDC42-binding kinase gamma) (Myotonic dystrophy protein kinase-like alpha) (MRCK gamma) (DMPK-like gamma Length = 1551 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/24 (54%), Positives = 18/24 (75%) Frame = +1 Query: 121 GAGRPDGQSRLSQLRQEKEMLRER 192 G G P+GQS+ +QLR+E LRE+ Sbjct: 594 GIGSPEGQSQEAQLRKEVAALREQ 617
>METK_SYNP6 (Q5N1I9) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine| adenosyltransferase) (AdoMet synthetase) (MAT) Length = 406 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Frame = +3 Query: 117 SWSRPARRPVEVISAQAGERNVAREMAG--MRFHYRPHPLGSVRHFS 251 S++ RPV V+ G VA E+ +R H+ HP G + HF+ Sbjct: 310 SYAIGVARPVSVLVETFGTGKVADEVLLDLVRKHFELHPAGIIEHFN 356
>CU062_MOUSE (Q9D4G1) Putative protein C21orf62 homolog| Length = 230 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/37 (40%), Positives = 21/37 (56%) Frame = +1 Query: 139 GQSRLSQLRQEKEMLRERWQGCVFIIVLILSEASGTS 249 GQS L R+E L + WQ C+FI L ++ +G S Sbjct: 154 GQSLLIHSRREGSSLYKGWQTCMFISFLDVALFNGDS 190
>ALR2_THETN (Q8R860) Alanine racemase 2 (EC 5.1.1.1)| Length = 388 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 5/57 (8%) Frame = -3 Query: 332 VCLDRTMIXARSDGELSVSERRIVLSPRE-----VPDASERMRTIMKTHPCHLSRNI 177 VC+D+TMI + V + ++ +E D ++++RTI C +SR + Sbjct: 313 VCMDQTMIDVTEVEGVEVGDEVVIFGEQEGKRITADDIAKKLRTIPHEVYCGISRRV 369
>FOXD1_HUMAN (Q16676) Forkhead box protein D1 (Forkhead-related protein FKHL8)| (Forkhead-related transcription factor 4) (FREAC-4) Length = 465 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/18 (61%), Positives = 13/18 (72%) Frame = +3 Query: 183 AREMAGMRFHYRPHPLGS 236 A E+A F YRPHPLG+ Sbjct: 319 AAELARTAFGYRPHPLGA 336
>ALR1_STAAR (Q6GF03) Alanine racemase 1 (EC 5.1.1.1)| Length = 382 Score = 27.3 bits (59), Expect = 9.1 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 7/65 (10%) Frame = -3 Query: 350 HTCACL--VCLDRTMIXA-----RSDGELSVSERRIVLSPREVPDASERMRTIMKTHPCH 192 H C + VC+D+T++ D + + R SP+ V A+E+ TI C+ Sbjct: 302 HQCEVIGRVCMDQTIVKVPDQVKAGDSVILIDNHRE--SPQSVEVAAEKQHTINYEVLCN 359 Query: 191 LSRNI 177 LSR + Sbjct: 360 LSRRL 364 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,738,167 Number of Sequences: 219361 Number of extensions: 930611 Number of successful extensions: 2476 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2389 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2476 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 1380984984 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)