ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast52b08 |
|---|---|
| Clone Library Name | barley_pub |
>ERO1_ARATH (Q9C7S7) Endoplasmic oxidoreductin-1 precursor (EC 1.8.4.-)| Length = 469 Score = 71.2 bits (173), Expect = 5e-13 Identities = 30/44 (68%), Positives = 33/44 (75%) Frame = +3 Query: 261 CGCPGARKYTGMVEDCCCDYETVDAINEEVLNPILQDLVALPFF 392 C KY GM+EDCCCDYETVD +N EVLNP+LQDLV PFF Sbjct: 54 CSLQKTGKYKGMIEDCCCDYETVDNLNTEVLNPLLQDLVTTPFF 97
>ERO2_ARATH (Q7X9I4) Endoplasmic oxidoreductin-2 precursor (EC 1.8.4.-)| Length = 472 Score = 68.2 bits (165), Expect = 5e-12 Identities = 30/46 (65%), Positives = 36/46 (78%), Gaps = 2/46 (4%) Frame = +3 Query: 261 CGCPGA--RKYTGMVEDCCCDYETVDAINEEVLNPILQDLVALPFF 392 C C A +KY G+VEDCCCDYETV+ +N EVLNP+LQDLV PF+ Sbjct: 55 CNCRQAEQQKYIGIVEDCCCDYETVNRLNTEVLNPLLQDLVKTPFY 100
>WASF1_MOUSE (Q8R5H6) Wiskott-Aldrich syndrome protein family member 1| (WASP-family protein member 1) (WAVE-1 protein) Length = 559 Score = 35.4 bits (80), Expect = 0.033 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTP 98 PP PPA +PPP + + +AP HP P Sbjct: 355 PPPPPATALQAPAVPPPPAPLQIAPGVLHPAP 386
>WASF1_HUMAN (Q92558) Wiskott-Aldrich syndrome protein family member 1| (WASP-family protein member 1) (WAVE-1 protein) (Verprolin homology domain-containing protein 1) Length = 559 Score = 35.4 bits (80), Expect = 0.033 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTP 98 PP PPA +PPP + + +AP HP P Sbjct: 355 PPPPPATALQAPAVPPPPAPLQIAPGVLHPAP 386
>ERO1A_HUMAN (Q96HE7) ERO1-like protein alpha precursor (EC 1.8.4.-)| (ERO1-Lalpha) (Oxidoreductin-1-Lalpha) (Endoplasmic oxidoreductin-1-like protein) (ERO1-L) Length = 468 Score = 35.0 bits (79), Expect = 0.043 Identities = 15/35 (42%), Positives = 21/35 (60%) Frame = +3 Query: 288 TGMVEDCCCDYETVDAINEEVLNPILQDLVALPFF 392 +G ++DC CD ET+D N L P LQ L+ +F Sbjct: 40 SGYLDDCTCDVETIDRFNNYRLFPRLQKLLESDYF 74
>ERO1L_DROME (Q9V3A6) Ero1-like protein precursor (EC 1.8.4.-) (Endoplasmic| oxidoreductin-1-like protein) Length = 483 Score = 35.0 bits (79), Expect = 0.043 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +3 Query: 291 GMVEDCCCDYETVDAINEEVLNPILQDLVALPFF 392 G + DC CD +TVD N + P LQ L+ FF Sbjct: 50 GSINDCSCDVDTVDHFNNMKIYPRLQSLLVKNFF 83
>ERO1A_RAT (Q8R4A1) ERO1-like protein alpha precursor (EC 1.8.4.-)| (ERO1-Lalpha) (Oxidoreductin-1-Lalpha) (Endoplasmic oxidoreductin-1-like protein) (ERO1-L) (Global ischemia-induced protein 11) Length = 464 Score = 35.0 bits (79), Expect = 0.043 Identities = 15/35 (42%), Positives = 21/35 (60%) Frame = +3 Query: 288 TGMVEDCCCDYETVDAINEEVLNPILQDLVALPFF 392 +G ++DC CD ET+D N L P LQ L+ +F Sbjct: 40 SGYLDDCTCDVETIDKFNNYRLFPRLQKLLESDYF 74
>ERO1A_MOUSE (Q8R180) ERO1-like protein alpha precursor (EC 1.8.4.-)| (ERO1-Lalpha) (Oxidoreductin-1-Lalpha) (Endoplasmic oxidoreductin-1-like protein) (ERO1-L) Length = 464 Score = 35.0 bits (79), Expect = 0.043 Identities = 15/35 (42%), Positives = 21/35 (60%) Frame = +3 Query: 288 TGMVEDCCCDYETVDAINEEVLNPILQDLVALPFF 392 +G ++DC CD ET+D N L P LQ L+ +F Sbjct: 40 SGYLDDCTCDVETIDKFNNYRLFPRLQKLLESDYF 74
>FIP1_PONPY (Q5RAA7) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)| Length = 588 Score = 32.7 bits (73), Expect = 0.21 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +3 Query: 6 PAPPAADTARKILPPPSSQISLAPRTFHPTP 98 P PP TA ++PPP I++ P F P P Sbjct: 361 PPPPTVSTAPPLIPPPGIPITVPPPGFPPPP 391
>FIP1_MOUSE (Q9D824) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)| Length = 581 Score = 32.7 bits (73), Expect = 0.21 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +3 Query: 6 PAPPAADTARKILPPPSSQISLAPRTFHPTP 98 P PP TA ++PPP I++ P F P P Sbjct: 352 PPPPTVSTAPPLIPPPGIPITVPPPGFPPPP 382
>ZN516_MOUSE (Q7TSH3) Zinc finger protein 516| Length = 1157 Score = 31.6 bits (70), Expect = 0.48 Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 5/31 (16%) Frame = +2 Query: 23 GHGEENPSAAVQPDLAR-----SQNLPPHPG 100 GHG+E PSAAVQ LA+ S L P PG Sbjct: 884 GHGQEPPSAAVQGPLAKPKQEGSSRLAPSPG 914
>STNB_CAEEL (P90761) Putative stoned B-like protein (Unc-41)| Length = 1657 Score = 31.2 bits (69), Expect = 0.63 Identities = 16/46 (34%), Positives = 20/46 (43%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAPAAD 140 P AP +TA PP + P P PAN+ +EP P D Sbjct: 694 PEAPKKDETAVDAAAPPRPPPAARPPPPRPAPANKEKPKEPEPEED 739
>CN155_HUMAN (Q5H9T9) Protein C14orf155| Length = 837 Score = 31.2 bits (69), Expect = 0.63 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = +3 Query: 12 PPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAPAAD 140 PPA + ++ PPP+ + AP P PA SE P A+ Sbjct: 649 PPAEEAPAEVQPPPAEE---APAEVQPPPAEEAPSEVQPPPAE 688 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +3 Query: 12 PPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAPAAD 140 PPA + ++ PPP+ + AP P PA +E P A+ Sbjct: 637 PPAEEAPAEVQPPPAEE---APAEVQPPPAEEAPAEVQPPPAE 676 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +3 Query: 12 PPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAPAAD 140 PPA + ++ PPP+ + AP P PA +E P A+ Sbjct: 625 PPAEEAPAEVQPPPAEE---APAEVQPPPAEEAPAEVQPPPAE 664 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +3 Query: 12 PPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAPAAD 140 PPA + ++ PPP+ + AP P PA +E P A+ Sbjct: 613 PPAEEAPAEVQPPPAEE---APAEVQPPPAEEAPAEVQPPPAE 652
>DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 407 Score = 30.8 bits (68), Expect = 0.82 Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTPANRG--MSEEPAPAAD 140 PP PP A +PPP + AP F P P+ MS+ P D Sbjct: 296 PPPPPPDQFAPPGVPPPPATPGAAPLAFPPPPSQAAPDMSKPPTAQPD 343
>DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 406 Score = 30.8 bits (68), Expect = 0.82 Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTPANRG--MSEEPAPAAD 140 PP PP A +PPP + AP F P P+ MS+ P D Sbjct: 296 PPPPPPDQFAPPGVPPPPATPGAAPLAFPPPPSQAAPDMSKPPTAQPD 343
>ERO1B_MOUSE (Q8R2E9) ERO1-like protein beta precursor (EC 1.8.4.-) (ERO1-Lbeta)| (Oxidoreductin-1-Lbeta) (Endoplasmic oxidoreductin-1-like protein B) Length = 467 Score = 30.4 bits (67), Expect = 1.1 Identities = 11/35 (31%), Positives = 21/35 (60%) Frame = +3 Query: 288 TGMVEDCCCDYETVDAINEEVLNPILQDLVALPFF 392 TG+++DC CD +++D N + P ++ L +F Sbjct: 36 TGVLDDCLCDIDSIDKFNTYKIFPKIKKLQERDYF 70
>IF2_LEIXX (Q6AG49) Translation initiation factor IF-2| Length = 916 Score = 30.4 bits (67), Expect = 1.1 Identities = 16/47 (34%), Positives = 23/47 (48%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAPAADG 143 P A ADTA+ PP S +S +P +N+GM + P+ G Sbjct: 132 PAAGAPADTAKPSSPPRPSGVSAPRPGNNPFASNQGMGQRPSAPRPG 178
>WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) Length = 487 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 3/51 (5%) Frame = +3 Query: 3 PPAPPAADTA---RKILPPPSSQISLAPRTFHPTPANRGMSEEPAPAADGG 146 PP PP + R+ +PPP SQ S P P P + P P + G Sbjct: 253 PPPPPVGNRPSMHREAVPPPPSQNSKPPVPSTPRPGAGSQAPPPPPPSRPG 303
>ERO1B_HUMAN (Q86YB8) ERO1-like protein beta precursor (EC 1.8.4.-) (ERO1-Lbeta)| (Oxidoreductin-1-Lbeta) (Endoplasmic oxidoreductin-1-like protein B) Length = 467 Score = 30.0 bits (66), Expect = 1.4 Identities = 11/35 (31%), Positives = 21/35 (60%) Frame = +3 Query: 288 TGMVEDCCCDYETVDAINEEVLNPILQDLVALPFF 392 TG+++DC CD +++D N + P ++ L +F Sbjct: 36 TGVLDDCLCDIDSIDNFNTYKIFPKIKKLQERDYF 70
>WASIP_MOUSE (Q8K1I7) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) Length = 493 Score = 30.0 bits (66), Expect = 1.4 Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 3/46 (6%) Frame = +3 Query: 3 PPAPPAADTA---RKILPPPSSQISLAPRTFHPTPANRGMSEEPAP 131 PP PP + R+ +PPP SQ S P P P + P P Sbjct: 258 PPPPPVGNRPSMHREAVPPPPSQTSKPPVPSTPRPGLGSQAPPPPP 303
>GSHI_HUMAN (Q9H4S2) Homeobox protein GSH-1| Length = 264 Score = 30.0 bits (66), Expect = 1.4 Identities = 16/45 (35%), Positives = 21/45 (46%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAPAA 137 PP PPA + PP SQ AP + + G++ PA AA Sbjct: 70 PPGPPALPLLKASFPPFGSQYCHAPLGRQHSAVSPGVAHGPAAAA 114
>NASR_KLEOX (Q48468) Nitrate regulatory protein| Length = 396 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = -3 Query: 76 GASEIWLDGGGRIFLAVSAAGGA 8 GAS IWL GGR++ A AG A Sbjct: 51 GASNIWLCSGGRLYAAECRAGAA 73
>WASF2_HUMAN (Q9Y6W5) Wiskott-Aldrich syndrome protein family member 2| (WASP-family protein member 2) (WAVE-2 protein) (Verprolin homology domain-containing protein 2) Length = 498 Score = 29.6 bits (65), Expect = 1.8 Identities = 19/47 (40%), Positives = 21/47 (44%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAPAADG 143 PP PPAAD + PPP SQ + P P G P ADG Sbjct: 367 PPPPPAADYP-TLPPPPLSQPTGGAPPPPPPPPPPGPPPPPFTGADG 412
>WASF2_MOUSE (Q8BH43) Wiskott-Aldrich syndrome protein family member 2| (WASP-family protein member 2) (WAVE-2 protein) Length = 497 Score = 29.6 bits (65), Expect = 1.8 Identities = 20/47 (42%), Positives = 20/47 (42%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAPAADG 143 PP PPAAD PPP SQ S P P G P ADG Sbjct: 365 PPPPPAADYPMP--PPPLSQPSGGAPPPPPPPPPPGPPPLPFSGADG 409
>SCNNG_RABIT (Q28738) Amiloride-sensitive sodium channel gamma-subunit| (Epithelial Na+ channel gamma subunit) (Gamma ENaC) (Nonvoltage-gated sodium channel 1 gamma subunit) (SCNEG) (Gamma NaCH) Length = 653 Score = 29.6 bits (65), Expect = 1.8 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 3/36 (8%) Frame = +2 Query: 2 TASAPGRGHGEENPSAAVQPDL---ARSQNLPPHPG 100 +A AP G+ENP+ + DL + +LPP PG Sbjct: 585 SAEAPSGAQGQENPALEIDDDLPTFTSALSLPPAPG 620
>CRIP3_MOUSE (Q6Q6R3) Cysteine-rich protein 3 (CRP3) (Thymus LIM protein)| (m17TLP) Length = 243 Score = 29.6 bits (65), Expect = 1.8 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = +3 Query: 45 PPPSSQISLAPRTFHPTPANRGMS 116 PPP+S+ISL+P F P G+S Sbjct: 82 PPPASRISLSPSNFSPPRPRTGLS 105
>TPBG_RAT (Q5PQV5) Trophoblast glycoprotein precursor (5T4 oncofetal| trophoblast glycoprotein) (5T4 oncotrophoblast glycoprotein) Length = 426 Score = 29.3 bits (64), Expect = 2.4 Identities = 15/31 (48%), Positives = 15/31 (48%) Frame = -3 Query: 334 ASTVXXXXXXXSTIPVYFLAPGQPQPPPRER 242 AS ST P FLA G QPPP ER Sbjct: 31 ASAPSSSLPSSSTSPAAFLASGSAQPPPAER 61
>TPBG_MOUSE (Q9Z0L0) Trophoblast glycoprotein precursor (5T4 oncofetal| trophoblast glycoprotein) (5T4 oncotrophoblast glycoprotein) Length = 426 Score = 29.3 bits (64), Expect = 2.4 Identities = 15/31 (48%), Positives = 15/31 (48%) Frame = -3 Query: 334 ASTVXXXXXXXSTIPVYFLAPGQPQPPPRER 242 AS ST P FLA G QPPP ER Sbjct: 31 ASAPSSSVPSSSTSPAAFLASGSAQPPPAER 61
>SC6A8_RAT (P28570) Sodium- and chloride-dependent creatine transporter 1| (CT1) (Creatine transporter 1) (CHOT1) (Solute carrier family 6 member 8) Length = 635 Score = 29.3 bits (64), Expect = 2.4 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = -3 Query: 88 WKVLGASEIWLDGGGRIFLAVSAAGGA 8 W LG+ ++W+D G +IF + + GA Sbjct: 297 WSKLGSPQVWIDAGTQIFFSYAIGLGA 323
>SC6A8_HUMAN (P48029) Sodium- and chloride-dependent creatine transporter 1| (CT1) (Creatine transporter 1) (Solute carrier family 6 member 8) Length = 635 Score = 29.3 bits (64), Expect = 2.4 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = -3 Query: 88 WKVLGASEIWLDGGGRIFLAVSAAGGA 8 W LG+ ++W+D G +IF + + GA Sbjct: 297 WSKLGSPQVWIDAGTQIFFSYAIGLGA 323
>RANB9_HUMAN (Q96S59) Ran-binding protein 9 (RanBP9) (RanBP7) (Ran-binding| protein M) (RanBPM) (BPM90) (BPM-L) Length = 729 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/44 (36%), Positives = 19/44 (43%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAPA 134 PP PP A A PPP + A PA G++ P PA Sbjct: 72 PPPPPPATAAPPPPPPPPPPPASAAAPASGPPAPPGLAAGPGPA 115
>CTGE5_HUMAN (O15320) Cutaneous T-cell lymphoma-associated antigen 5 (cTAGE-5| protein) (cTAGE family member 5) (Meningioma-expressed antigen 6/11) (MEA6/MEA11) Length = 804 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 2/44 (4%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRT--FHPTPANRGMSEEPA 128 P PPA R + PP L PR F P P + G SE P+ Sbjct: 741 PGPPPAPFAMRNVYPPRGFPPYLPPRPGFFPPPPHSEGRSEFPS 784
>WASL_RAT (O08816) Neural Wiskott-Aldrich syndrome protein (N-WASP)| Length = 501 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTP 98 PP PPA ++ PPP +S+A T P P Sbjct: 341 PPPPPALPSSAPSGPPPPPPLSMAGSTAPPPP 372 Score = 28.1 bits (61), Expect = 5.3 Identities = 19/44 (43%), Positives = 20/44 (45%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAPA 134 PP P A TA PPPS + P P P NR M P PA Sbjct: 308 PPPPSRAPTAAPPPPPPSRPGVVVP----PPPPNR-MYPPPPPA 346
>NU214_DROME (Q9W1X4) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)| (214 kDa nucleoporin) (DNup214) Length = 1711 Score = 29.3 bits (64), Expect = 2.4 Identities = 12/41 (29%), Positives = 21/41 (51%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEP 125 PP+PP + P P + +++AP P P+ + E+P Sbjct: 900 PPSPPDVAPTPAVAPMPQATVTVAPPLPKPMPSIPSVVEKP 940
>SC6A8_MOUSE (Q8VBW1) Sodium- and chloride-dependent creatine transporter 1| (CT1) (Creatine transporter 1) (Solute carrier family 6 member 8) Length = 640 Score = 29.3 bits (64), Expect = 2.4 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = -3 Query: 88 WKVLGASEIWLDGGGRIFLAVSAAGGA 8 W LG+ ++W+D G +IF + + GA Sbjct: 297 WSKLGSPQVWIDAGTQIFFSYAIGLGA 323
>OMP19_RHILO (Q98EC1) Outer membrane lipoprotein omp19 homolog precursor| Length = 179 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 4/44 (9%) Frame = +3 Query: 6 PAP----PAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEP 125 PAP PA LPPP+S S P F PAN ++ P Sbjct: 34 PAPLQPAPAGQVTSNQLPPPASPGSTDPSKFPTAPANTQVASLP 77
>SPT5H_MOUSE (O55201) Transcription elongation factor SPT5 (DRB| sensitivity-inducing factor large subunit) (DSIF large subunit) Length = 1082 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = +3 Query: 15 PAADTARKILPPPSS-QISLAPRTFHPTPANRGMSEEPAPAADG 143 P+ + ++ P P+ Q + +P ++HPTP+ P+P+ G Sbjct: 900 PSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVG 943
>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich| glycoprotein) Length = 620 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/44 (34%), Positives = 17/44 (38%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAPA 134 PP PP+ PP S P +F P P S P PA Sbjct: 355 PPPPPSYSPPPPTYLPPPPPSSPPPPSFSPPPPTYEQSPPPPPA 398
>DIAP1_HUMAN (O60610) Protein diaphanous homolog 1 (Diaphanous-related formin-1)| (DRF1) Length = 1248 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 1/48 (2%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLA-PRTFHPTPANRGMSEEPAPAADG 143 PP PP +AR PPP S P P P GM P P G Sbjct: 655 PPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGG 702
>VP61_NPVAC (Q03209) 61 kDa protein| Length = 543 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 5/48 (10%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQIS-----LAPRTFHPTPANRGMSEEPAP 131 PP PP D ++LPPP+ +S L T PA + E P Sbjct: 303 PPPPPLVDLPSEMLPPPAPSLSNVLSELKSGTVRLKPAQKRPQSEIIP 350
>SPT5H_HUMAN (O00267) Transcription elongation factor SPT5 (hSPT5) (DRB| sensitivity-inducing factor large subunit) (DSIF large subunit) (DSIF p160) (Tat-cotransactivator 1 protein) (Tat-CT1 protein) Length = 1087 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = +3 Query: 15 PAADTARKILPPPSS-QISLAPRTFHPTPANRGMSEEPAPAADG 143 P+ + ++ P P+ Q + +P ++HPTP+ P+P+ G Sbjct: 906 PSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVG 949
>CJ078_MOUSE (Q8BP27) Protein C10orf78 homolog| Length = 319 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Frame = +3 Query: 3 PPAPPAADTARKILP-PPSSQISLAPRTFHPTPANRGMSEEP 125 PP PAA R+ P PP+S + PR P+P + ++P Sbjct: 84 PPTSPAAPQPRENPPSPPTSPAAPQPRENPPSPHSNSSGKQP 125 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Frame = +3 Query: 3 PPAPPAADTARKILP-PPSSQISLAPRTFHPTPANRGMSEEP 125 PP PAA R+ P PP+S + PR P+P + +P Sbjct: 68 PPTSPAAPQPRENPPSPPTSPAAPQPRENPPSPPTSPAAPQP 109
>SPT5H_PONPY (Q5R405) Transcription elongation factor SPT5 (DRB| sensitivity-inducing factor large subunit) (DSIF large subunit) Length = 1083 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = +3 Query: 15 PAADTARKILPPPSS-QISLAPRTFHPTPANRGMSEEPAPAADG 143 P+ + ++ P P+ Q + +P ++HPTP+ P+P+ G Sbjct: 902 PSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVG 945
>NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator| of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor-associating factor) (TRAC) (CTG repeat p Length = 2517 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/45 (37%), Positives = 20/45 (44%) Frame = +3 Query: 6 PAPPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAPAAD 140 PAPPA PPP + + P + RG S PAP AD Sbjct: 994 PAPPAP-------PPPQNLQPESDAPQQPGSSPRGKSRSPAPPAD 1031
>RGF1_SCHPO (Q9Y7U6) Rho1 guanine nucleotide exchange factor 1| Length = 1334 Score = 28.5 bits (62), Expect = 4.1 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = +3 Query: 21 ADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAP 131 A ++K LPPP+ ++ P F T S+ PAP Sbjct: 43 APVSKKPLPPPTRRLPRKPLPFRSTSLQPPSSQPPAP 79
>TAF4_HUMAN (O00268) Transcription initiation factor TFIID subunit 4| (Transcription initiation factor TFIID 135 kDa subunit) (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130) (TAFII130) Length = 1085 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 4/51 (7%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTPANRGMS----EEPAPAADG 143 PP PPA T + P+ + AP P A G S PAPAA G Sbjct: 271 PPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGG 321
>HPS6_MOUSE (Q8BLY7) Hermansky-Pudlak syndrome 6 protein homolog (Ruby-eye| protein) (Ru) Length = 805 Score = 28.5 bits (62), Expect = 4.1 Identities = 13/27 (48%), Positives = 20/27 (74%) Frame = -3 Query: 91 GWKVLGASEIWLDGGGRIFLAVSAAGG 11 GWK+L ++E+ DGG R+ +AV+A G Sbjct: 111 GWKLLQSTELCPDGGARV-MAVAATRG 136
>DAZP1_XENLA (Q98SJ2) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) (Proline-rich Vg1 mRNA-binding protein) Length = 360 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 2/48 (4%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTPAN--RGMSEEPAPAAD 140 PP PP +PPP AP F P P + +S+ P+ D Sbjct: 295 PPPPPPDQFVSSGVPPPPGTPGAAPLAFPPPPGQSAQDLSKPPSGQQD 342
>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2167 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/45 (37%), Positives = 21/45 (46%) Frame = +3 Query: 9 APPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAPAADG 143 APPA +R + P S I P T P P S PAP++ G Sbjct: 910 APPAMKFSRSLSVPGSEDIPPPPTTSPPEPP---YSTPPAPSSSG 951
>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5| Length = 388 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/47 (31%), Positives = 19/47 (40%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAPAADG 143 PP PP + + PP + PR P P + GM P P G Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRP--PPPPSSGMWPPPPPPPPG 305
>IF4B_MOUSE (Q8BGD9) Eukaryotic translation initiation factor 4B (eIF-4B)| Length = 611 Score = 28.5 bits (62), Expect = 4.1 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Frame = +3 Query: 12 PPAADTARKILP-PPSSQISLAPRTFHPTPANRGM-SEEPAPAADGG 146 PP D K++P PP + + R+ +P ++ +E+P+P + GG Sbjct: 464 PPKPDQPLKVMPAPPPKENAWVKRSSNPPARSQSSDTEQPSPTSGGG 510
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2| (ALL1-related protein) Length = 5262 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 3/46 (6%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQI---SLAPRTFHPTPANRGMSEEPAP 131 PP+ P LP PSSQ+ + P T TP +G + EP P Sbjct: 4035 PPSSPQEPKRPSQLPSPSSQLPTEAQLPPTHPGTPKPQGPTLEPPP 4080
>RANB9_MOUSE (P69566) Ran-binding protein 9 (RanBP9) (Ran-binding protein M)| (RanBPM) (B cell antigen receptor Ig beta-associated protein 1) (IBAP-1) Length = 653 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/47 (31%), Positives = 16/47 (34%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAPAADG 143 PP PP A A PP + P P P S AP G Sbjct: 15 PPPPPPASAAAPATAPPGLAVGPGPAAGVPVPGLAAGSSAAAPFPHG 61
>PRA_MYCTU (O53426) Proline-rich antigen homolog| Length = 240 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/47 (36%), Positives = 19/47 (40%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAPAADG 143 PPA P + PPPSS P P P G P P+A G Sbjct: 27 PPAAPPGGSGYAPPPPPSSGSGYPPP---PPPPGGGAYPPPPPSAGG 70
>HPS6_RAT (Q7M733) Hermansky-Pudlak syndrome 6 protein homolog (Ruby-eye| protein homolog) (Ruby-eye-like protein) (Ru) Length = 809 Score = 28.5 bits (62), Expect = 4.1 Identities = 13/27 (48%), Positives = 20/27 (74%) Frame = -3 Query: 91 GWKVLGASEIWLDGGGRIFLAVSAAGG 11 GWK+L ++E+ DGG R+ +AV+A G Sbjct: 111 GWKLLQSTELCPDGGARV-MAVAATRG 136
>TACC2_HUMAN (O95359) Transforming acidic coiled-coil-containing protein 2 (Anti| Zuai-1) (AZU-1) Length = 1026 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/47 (34%), Positives = 17/47 (36%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAPAADG 143 PPAPP PPP I + P P G E P DG Sbjct: 43 PPAPP---------PPPPEVIPEPEVSTQPPPEEPGCGSETVPVPDG 80
>IF2_CORGL (Q8NP40) Translation initiation factor IF-2| Length = 1004 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/41 (36%), Positives = 18/41 (43%) Frame = +3 Query: 6 PAPPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPA 128 PA PAA +A K P + P PTP + EPA Sbjct: 133 PAAPAAPSAAKSGSAPKPAAAAKPAFSGPTPGDAAKKAEPA 173
>NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)| Length = 268 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/44 (34%), Positives = 20/44 (45%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAPA 134 PP PP+ T R P P PR P+P + S P+P+ Sbjct: 136 PPPPPSPPTPRSSTPIPH-----PPRRSLPSPPSPSPSPSPSPS 174
>YOFA_CAEEL (Q09337) Hypothetical protein ZK1290.10 precursor| Length = 412 Score = 28.1 bits (61), Expect = 5.3 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Frame = +3 Query: 6 PAPPAADTARKILP--PPSSQISLAPRTFHPTPANRGMSEEPAPA 134 P PPA+ T+ LP PPS+Q+ AP P A R E P P+ Sbjct: 84 PQPPASLTS---LPAAPPSAQV--APPAIRPPEAKRTSLEPPQPS 123
>DIAP1_MOUSE (O08808) Protein diaphanous homolog 1 (Diaphanous-related formin-1)| (DRF1) (mDIA1) (p140mDIA) Length = 1255 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 1/49 (2%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPT-PANRGMSEEPAPAADGG 146 PPAPP + ++PPP L P+ P G P P GG Sbjct: 572 PPAPPLPGDSGTVIPPPPPPPPLPGGVVPPSPPLPPGTCIPPPPPLPGG 620
>WASL_MOUSE (Q91YD9) Neural Wiskott-Aldrich syndrome protein (N-WASP)| Length = 501 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/47 (29%), Positives = 21/47 (44%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAPAADG 143 PP PP + + PPP +++ P P+ A G P P+ G Sbjct: 319 PPPPPPSRPGVVVPPPPPNRMYPPPPPALPSSAPSGPPPPPPPSMAG 365 Score = 28.1 bits (61), Expect = 5.3 Identities = 19/44 (43%), Positives = 20/44 (45%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAPA 134 PP P A TA PPPS + P P P NR M P PA Sbjct: 308 PPPPSRAPTAAPPPPPPSRPGVVVP----PPPPNR-MYPPPPPA 346 Score = 27.7 bits (60), Expect = 6.9 Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 4/51 (7%) Frame = +3 Query: 3 PPAPPA----ADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAPAADG 143 PP PPA A + PPPS S AP P P G P +DG Sbjct: 341 PPPPPALPSSAPSGPPPPPPPSMAGSTAPPPPPPPPPPPGPPPPPGLPSDG 391
>POLLU_LOTJA (Q5H8A5) Putative ion channel POLLUX, chloroplast precursor| Length = 917 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/43 (37%), Positives = 20/43 (46%) Frame = +3 Query: 12 PPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAPAAD 140 PP T + +LPPPSS S P + N + P P AD Sbjct: 33 PPLKKT-KTLLPPPSSSSSNRPLHLRVSIDNNNNNNAPPPPAD 74
>INO80_ASPFU (Q4WTV7) Putative DNA helicase ino80 (EC 3.6.1.-)| Length = 1708 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +3 Query: 42 LPPPSSQISLAPRTFHPTPANRGMSEEPAPAA 137 LP P++ I+ AP T P PA R ++ P A Sbjct: 212 LPGPATTITPAPPTLAPVPARRRLTPPPVTHA 243
>CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)| Length = 2442 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/44 (38%), Positives = 21/44 (47%) Frame = +3 Query: 6 PAPPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAPAA 137 P PP + PPP+S + P H TP GM+ P PAA Sbjct: 844 PCPPVTQSPLHPTPPPASTAAGMPSLQHTTPP--GMT-PPQPAA 884
>PG33_MYCTU (Q50615) Hypothetical PE-PGRS family protein PE_PGRS33| Length = 498 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = -3 Query: 97 GVGWKVLGASEIWLDGGGRIFLAVSAAGGAGG 2 GVG A + G G +F V AGGAGG Sbjct: 233 GVGGLAADAGDGGAGGDGGLFFGVGGAGGAGG 264
>WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-WASP)| Length = 505 Score = 28.1 bits (61), Expect = 5.3 Identities = 19/44 (43%), Positives = 19/44 (43%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAPA 134 PP P A TA PPPS P P P NR M P PA Sbjct: 311 PPPPSRAPTAAPPPPPPSRPSVAVP----PPPPNR-MYPPPPPA 349
>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor| (Hydroxyproline-rich glycoprotein 1) Length = 555 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/44 (29%), Positives = 20/44 (45%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAPA 134 PP+P + + P PS + +P PTP + P+PA Sbjct: 147 PPSPAPPSPSPPVPPSPSPPVPPSPAPPSPTPPSPSPPVPPSPA 190 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/43 (37%), Positives = 18/43 (41%) Frame = +3 Query: 6 PAPPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAPA 134 PAPP T PP S AP P P + S P+PA Sbjct: 297 PAPPTPPTPPSPSPPSPVPPSPAPVPPSPAPPSPAPSPPPSPA 339
>DAAM1_MOUSE (Q8BPM0) Disheveled-associated activator of morphogenesis 1| Length = 1071 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFH-PTPAN 104 PP PP +LPPP + +SL + + P P N Sbjct: 574 PPPPPGPPPLGGVLPPPGAPVSLTLKKKNIPQPTN 608
>CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48)| Length = 2441 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/44 (38%), Positives = 21/44 (47%) Frame = +3 Query: 6 PAPPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAPAA 137 P PP + PPP+S + P HPT GM+ P PAA Sbjct: 846 PCPPVTQSPLHPTPPPASTAAGMPSLQHPTAP--GMT-PPQPAA 886
>AB1IP_BRARE (Q6PFT9) Amyloid beta A4 precursor protein-binding family B member| 1-interacting protein (APBB1-interacting protein 1) Length = 646 Score = 27.7 bits (60), Expect = 6.9 Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 1/46 (2%) Frame = +3 Query: 3 PPAPPAADTARKIL-PPPSSQISLAPRTFHPTPANRGMSEEPAPAA 137 PP P AD L PPP S +S + P P + S P P A Sbjct: 532 PPPPEIADLPPDFLPPPPPSFVSHGGESLPPPPPDPVASLPPPPPA 577
>BARH2_HUMAN (Q9NY43) BarH-like 2 homeobox protein| Length = 387 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/42 (35%), Positives = 19/42 (45%) Frame = +3 Query: 6 PAPPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAP 131 P PPAA + + P P Q L P+ P P + S AP Sbjct: 94 PPPPAAAPTQSLQPLPQQQQPLPPQQPPPPPPQQLGSAASAP 135
>SPT5H_CHICK (Q5ZI08) Transcription elongation factor SPT5 (DRB| sensitivity-inducing factor large subunit) (DSIF large subunit) Length = 1079 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Frame = +3 Query: 15 PAADTARKILPPPSS-QISLAPRTFHPTPANRGMSEEPAPAADG 143 P+ + ++ P P Q + +P ++HPTP+ P+P+ G Sbjct: 898 PSPQSYHQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVG 941
>AB1IP_MOUSE (Q8R5A3) Amyloid beta A4 precursor protein-binding family B member| 1-interacting protein (APBB1-interacting protein 1) (Proline-rich EVH1 ligand 1) (PREL-1) (Proline-rich protein 48) Length = 670 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/42 (33%), Positives = 17/42 (40%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPA 128 PP PP D + + PPP P F P P E+ A Sbjct: 564 PPPPPEEDNSGLLPPPPPPPYLEEPPDFVPPPPPPAAVEDSA 605
>SPT5H_BRARE (Q9DDT5) Transcription elongation factor SPT5 (DRB| sensitivity-inducing factor large subunit) (DSIF large subunit) (Protein foggy) Length = 1084 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Frame = +3 Query: 15 PAADTARKILPPPSS-QISLAPRTFHPTPANRGMSEEPAPAADG 143 P+ + ++ P P Q + +P ++HPTP+ P+P+ G Sbjct: 904 PSPQSYHQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVG 947
>WASP_MOUSE (P70315) Wiskott-Aldrich syndrome protein homolog (WASp)| Length = 520 Score = 27.7 bits (60), Expect = 6.9 Identities = 18/48 (37%), Positives = 19/48 (39%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAPAADGG 146 PPAPP PPP AP PTP + G PAP G Sbjct: 408 PPAPPPPPPPPP--PPPCPGSGPAPPPLPPTPVSGG---SPAPGGGRG 450
>KLF13_MOUSE (Q9JJZ6) Krueppel-like factor 13 (Transcription factor BTEB3)| (Basic transcription element-binding protein 3) (BTE-binding protein 3) (RANTES factor of late activated T-lymphocytes 1) (RFLAT-1) (Erythroid transcription factor FKLF-2) Length = 289 Score = 27.7 bits (60), Expect = 6.9 Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 4/51 (7%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTPA----NRGMSEEPAPAADG 143 PPAPPA + P + AP P+PA + +EP PA G Sbjct: 98 PPAPPAPPPGPEPASPGQAGAPAAP----PSPAWSEPEAALEQEPGPAGSG 144
>YLPM1_HUMAN (P49750) YLP motif-containing protein 1 (Nuclear protein ZAP3)| (ZAP113) Length = 1951 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 9/48 (18%) Frame = +3 Query: 6 PAPPAADTARK---------ILPPPSSQISLAPRTFHPTPANRGMSEE 122 P PPA+ + +LP P S S P T+HP + G SE+ Sbjct: 455 PVPPASSSQSSQVPEKPRPALLPTPVSFGSAPPTTYHPPLQSAGPSEQ 502
>DDEF2_HUMAN (O43150) Development and differentiation-enhancing factor 2 (Pyk2| C-terminus-associated protein) (PAP) (Paxillin-associated protein with ARFGAP activity 3) (PAG3) Length = 1006 Score = 27.7 bits (60), Expect = 6.9 Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 9/54 (16%) Frame = +3 Query: 6 PAPPAADTAR---------KILPPPSSQISLAPRTFHPTPANRGMSEEPAPAAD 140 P PP A T K PP SQI P P P +R ++PAP AD Sbjct: 846 PPPPVAKTPSVMEALSQPSKPAPPGISQIR--PPPLPPQPPSRLPQKKPAPGAD 897
>WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-WASP)| Length = 505 Score = 27.7 bits (60), Expect = 6.9 Identities = 20/44 (45%), Positives = 20/44 (45%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAPA 134 PP P A TA PPPS AP P P NR M P PA Sbjct: 311 PPPPSRAPTAAPPPPPPSRPGVGAP----PPPPNR-MYPPPLPA 349
>HCN2_RAT (Q9JKA9) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 2 Length = 863 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/43 (32%), Positives = 20/43 (46%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAP 131 PP PP ++ PPP AP TP++ ++EP P Sbjct: 22 PPPPPPPPAPLQLQPPP------APPPNPTTPSHPESADEPGP 58
>BAI1_HUMAN (O14514) Brain-specific angiogenesis inhibitor 1 precursor| Length = 1584 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 1/43 (2%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISL-APRTFHPTPANRGMSEEPA 128 P APPA PPP Q L P P P + G EPA Sbjct: 1404 PEAPPAQPPPPPPPPPPPPQQPLPPPPNLEPAPPSLGDPGEPA 1446
>SF3A2_MOUSE (Q62203) Splicing factor 3A subunit 2 (Spliceosome-associated| protein 62) (SAP 62) (SF3a66) Length = 475 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 1/48 (2%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQI-SLAPRTFHPTPANRGMSEEPAPAADG 143 PPAP A + PPPS+ + AP P PA + P A G Sbjct: 363 PPAPGVHPPAPGVHPPPSAGVHPQAPGVHPPAPAVHPQAPGVHPPAPG 410
>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2161 Score = 27.3 bits (59), Expect = 9.0 Identities = 19/45 (42%), Positives = 21/45 (46%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAPAA 137 PPAPP A PPP +SL P P N + PAPAA Sbjct: 2001 PPAPPPA-------PPP---LSLLPVGPALQPPNLAVRPPPAPAA 2035
>AP2A1_MOUSE (P17426) AP-2 complex subunit alpha-1 (Adapter-related protein| complex 2 alpha-1 subunit) (Alpha-adaptin A) (Adaptor protein complex AP-2 alpha-1 subunit) (Clathrin assembly protein complex 2 alpha-A large chain) (100 kDa coated vesicle prote Length = 977 Score = 27.3 bits (59), Expect = 9.0 Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 14/62 (22%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTPANRGMSE--------------EPAPAAD 140 PPA P A +L S A + PTP +SE +PAPAAD Sbjct: 668 PPAAPPAPVGGNLLVDVFSDGPTAQPSLGPTPEEAFLSELEPPAPESPMALLADPAPAAD 727 Query: 141 GG 146 G Sbjct: 728 PG 729
>GAG_IPMA (P11365) Retrovirus-related Gag polyprotein [Contains: Protease (EC| 3.4.23.-)] Length = 827 Score = 27.3 bits (59), Expect = 9.0 Identities = 10/32 (31%), Positives = 18/32 (56%) Frame = +3 Query: 24 DTARKILPPPSSQISLAPRTFHPTPANRGMSE 119 D ++LPPP SQ + P+ P ++G+ + Sbjct: 504 DIKGRVLPPPDSQSAYVPKNGSSGPRSQGLKD 535
>BCAR1_HUMAN (P56945) Breast cancer anti-estrogen resistance protein 1| (CRK-associated substrate) (p130cas) Length = 870 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Frame = +3 Query: 3 PPAPPAADTARKILP-PPSSQIS-LAPRTFHPTPANRGMSEEPAPAADG 143 PPA PA P PP+SQ + + P T+ P P + + P+ A G Sbjct: 78 PPATPAQPQPGLHAPAPPASQYTPMLPNTYQPQPDSVYLVPTPSKAQQG 126
>BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2158 Score = 27.3 bits (59), Expect = 9.0 Identities = 19/45 (42%), Positives = 21/45 (46%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAPAA 137 PPAPP A PPP +SL P P N + PAPAA Sbjct: 1998 PPAPPPA-------PPP---LSLLPVGPALQPPNLAVRPPPAPAA 2032
>WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) (PRPL-2 protein) Length = 503 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 3/46 (6%) Frame = +3 Query: 3 PPAPPAADTA---RKILPPPSSQISLAPRTFHPTPANRGMSEEPAP 131 PP PP + R+ +PPP Q + P P P+ + P P Sbjct: 266 PPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPP 311
>TP1B_MALDO (P83336) Thaumatin-like protein 1b (Pathogenesis-related protein| 5b) (PR-5b) (Fragment) Length = 212 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 1/25 (4%) Frame = -1 Query: 105 DSPG-WGGRFWERARSGWTAAEGFS 34 D+P W GRFW R R AA FS Sbjct: 32 DAPSPWSGRFWGRTRCSTDAAGKFS 56
>RCOR2_XENLA (Q6NRZ0) REST corepressor 2| Length = 503 Score = 27.3 bits (59), Expect = 9.0 Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 5/47 (10%) Frame = +3 Query: 6 PAPPAADTARKI-LPPP--SSQISLAPRTFH--PTPANRGMSEEPAP 131 PAPPAA A + LPPP I AP T H P P G +P P Sbjct: 430 PAPPAAAAAASLSLPPPLLRPAIPCAP-TLHRQPPPLQPGRLLQPRP 475
>SUCB_SCHPO (O94415) Probable succinyl-CoA ligase [GDP-forming] beta-chain,| mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, beta chain) (SCS-beta) Length = 433 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +2 Query: 35 ENPSAAVQPDLARSQNLPPHPGE 103 ENPSA ++ L S NL PH E Sbjct: 168 ENPSAIIKRSLPNSPNLDPHIAE 190
>LECT_SOLTU (Q9S8M0) Chitin-binding lectin 1 precursor (PL-I)| Length = 323 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/45 (33%), Positives = 19/45 (42%) Frame = +3 Query: 3 PPAPPAADTARKILPPPSSQISLAPRTFHPTPANRGMSEEPAPAA 137 PP+PP+ PPP S +P P+P S P P A Sbjct: 163 PPSPPSPPPPSPPPPPPPSPPPPSPPPPSPSPPPPPASPPPPPPA 207 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.314 0.131 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,997,386 Number of Sequences: 219361 Number of extensions: 604661 Number of successful extensions: 3508 Number of sequences better than 10.0: 92 Number of HSP's better than 10.0 without gapping: 2846 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3439 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)
