| Clone Name | bast52b06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | IF35_HUMAN (O00303) Eukaryotic translation initiation factor 3 s... | 30 | 2.3 | 2 | IF35_MOUSE (Q9DCH4) Eukaryotic translation initiation factor 3 s... | 29 | 5.1 |
|---|
>IF35_HUMAN (O00303) Eukaryotic translation initiation factor 3 subunit 5| (eIF-3 epsilon) (eIF3 p47 subunit) (eIF3f) Length = 357 Score = 30.0 bits (66), Expect = 2.3 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = +3 Query: 315 EHQVLIYRYFAAGAPVPVHLVL 380 EH VLI+ Y++ AP P+HL + Sbjct: 181 EHSVLIHEYYSREAPNPIHLTV 202
>IF35_MOUSE (Q9DCH4) Eukaryotic translation initiation factor 3 subunit 5| (eIF-3 epsilon) (eIF3 p47 subunit) (eIF3f) Length = 361 Score = 28.9 bits (63), Expect = 5.1 Identities = 10/22 (45%), Positives = 16/22 (72%) Frame = +3 Query: 315 EHQVLIYRYFAAGAPVPVHLVL 380 EH VLI+ Y++ +P P+HL + Sbjct: 185 EHSVLIHEYYSRESPNPIHLTV 206 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.130 0.441 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,782,415 Number of Sequences: 219361 Number of extensions: 387891 Number of successful extensions: 1695 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1654 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1695 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2278320915 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)