ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast52b03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 139 8e-30
2dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic D... 139 8e-30
3dbj|AP005193.3| Oryza sativa (japonica cultivar-group) genomic D... 139 8e-30
4ref|XM_468656.2| Oryza sativa (japonica cultivar-group), mRNA 101 2e-18
5ref|XM_468655.1| Oryza sativa (japonica cultivar-group), mRNA 101 2e-18
6dbj|AK071008.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 2e-18
7gb|AC120529.3| Oryza sativa (japonica cultivar-group) chromosome... 62 2e-06
8gb|AC092262.6| Oryza sativa (japonica cultivar-group) chromosome... 62 2e-06
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 62 2e-06
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
11ref|NM_184957.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.4
12gb|AC116523.7| Mus musculus chromosome 9, clone RP24-349L11, com... 42 1.4
13gb|AC095036.2| Homo sapiens chromosome 1 clone RP11-320E2, compl... 42 1.4
14gb|AC120537.6| Oryza sativa chromosome 3 BAC OSJNBb0042N11 genom... 42 1.4
15dbj|AK069017.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
16gb|AC154277.1| Mus musculus BAC clone RP24-266G7 from 9, complet... 42 1.4
17ref|NM_103186.3| Arabidopsis thaliana unknown protein AT1G34630 ... 40 5.6
18ref|XM_474687.1| Oryza sativa (japonica cultivar-group), predic... 40 5.6
19ref|NM_197387.1| Oryza sativa (japonica cultivar-group) hypothet... 40 5.6
20gb|AC139170.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
21gb|AC135794.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
22gb|AC144452.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
23ref|XM_726398.1| Aspergillus fumigatus Af293 hypothetical protei... 40 5.6
24gb|AC051634.6| Oryza sativa chromosome 10 BAC OSJNBb0018B10 geno... 40 5.6
25gb|AY064983.1| Arabidopsis thaliana At1g34630/F12K21.3 mRNA, com... 40 5.6
26gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 5.6
27gb|AF332175.1|AF332175 Zea mays beta-expansin 2 (expB2) mRNA, pa... 40 5.6
28dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
29dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
30dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
31dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
32dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
33emb|BX814199.1|CNS0AC8C Arabidopsis thaliana Full-length cDNA Co... 40 5.6
34gb|AC069213.22| Homo sapiens 3 BAC RP11-338O10 (Roswell Park Can... 40 5.6
35gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.6
36gb|AC023279.2|AC023279 Genomic sequence for Arabidopsis thaliana... 40 5.6
37dbj|AP003946.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
38dbj|AP004991.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
39dbj|AP005105.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
40dbj|AP004573.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
41dbj|AK120960.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
42dbj|AK100605.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
43dbj|AK069594.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
44dbj|AK062755.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
45gb|AC007894.2|F21H2 Arabidopsis thaliana chromosome 1 BAC F21H2 ... 40 5.6
46gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
47gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
48emb|AL662994.3|OSJN00192 Oryza sativa genomic DNA, chromosome 4,... 40 5.6 
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  139 bits (70), Expect = 8e-30
 Identities = 121/138 (87%)
 Strand = Plus / Minus

                                                                            
Query: 157      gaacatcaagaccatctctttcgacgagaagagcaatgccgtgacggtgtccgggccgtt 216
                |||||||||||| ||||| | ||||||||||| |||||| |||| |||||| ||||||||
Sbjct: 24881899 gaacatcaagacgatctcgtacgacgagaagaacaatgcggtgatggtgtcggggccgtt 24881840

                                                                            
Query: 217      cgacgccgacaagctgtgcaggaagctctgctgcgaggccggccgggtgatcaaggagat 276
                ||||||||||||| |||||| |||||| |||||| |||||||| || | |||||||| ||
Sbjct: 24881839 cgacgccgacaaggtgtgcaagaagctgtgctgcaaggccggcaggatcatcaaggacat 24881780

                                  
Query: 277      gcacgtcaacggcaagga 294
                ||| ||||| ||||||||
Sbjct: 24881779 gcaggtcaagggcaagga 24881762



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 71/84 (84%)
 Strand = Plus / Minus

                                                                            
Query: 66       agatctccacggttgtcctcaaagttgaccttgaatacgcccgatgctacaggaagatga 125
                |||||||||||||||| ||||| |||||||| |||| ||  |||||||||| |||||| |
Sbjct: 24882287 agatctccacggttgtgctcaacgttgacctcgaatgcgatcgatgctacaagaagatca 24882228

                                        
Query: 126      ggaaggtcctctgcaagatccaag 149
                | |  ||||| |||| ||||||||
Sbjct: 24882227 gaagagtcctttgcaggatccaag 24882204



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 318      aggacgacggcggcggcgag 337
                ||||||||||||||||||||
Sbjct: 20297503 aggacgacggcggcggcgag 20297484
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>dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0072I06
          Length = 162411

 Score =  139 bits (70), Expect = 8e-30
 Identities = 121/138 (87%)
 Strand = Plus / Minus

                                                                         
Query: 157   gaacatcaagaccatctctttcgacgagaagagcaatgccgtgacggtgtccgggccgtt 216
             |||||||||||| ||||| | ||||||||||| |||||| |||| |||||| ||||||||
Sbjct: 65531 gaacatcaagacgatctcgtacgacgagaagaacaatgcggtgatggtgtcggggccgtt 65472

                                                                         
Query: 217   cgacgccgacaagctgtgcaggaagctctgctgcgaggccggccgggtgatcaaggagat 276
             ||||||||||||| |||||| |||||| |||||| |||||||| || | |||||||| ||
Sbjct: 65471 cgacgccgacaaggtgtgcaagaagctgtgctgcaaggccggcaggatcatcaaggacat 65412

                               
Query: 277   gcacgtcaacggcaagga 294
             ||| ||||| ||||||||
Sbjct: 65411 gcaggtcaagggcaagga 65394



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 71/84 (84%)
 Strand = Plus / Minus

                                                                         
Query: 66    agatctccacggttgtcctcaaagttgaccttgaatacgcccgatgctacaggaagatga 125
             |||||||||||||||| ||||| |||||||| |||| ||  |||||||||| |||||| |
Sbjct: 65919 agatctccacggttgtgctcaacgttgacctcgaatgcgatcgatgctacaagaagatca 65860

                                     
Query: 126   ggaaggtcctctgcaagatccaag 149
             | |  ||||| |||| ||||||||
Sbjct: 65859 gaagagtcctttgcaggatccaag 65836
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>dbj|AP005193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0493C06
          Length = 158923

 Score =  139 bits (70), Expect = 8e-30
 Identities = 121/138 (87%)
 Strand = Plus / Minus

                                                                          
Query: 157    gaacatcaagaccatctctttcgacgagaagagcaatgccgtgacggtgtccgggccgtt 216
              |||||||||||| ||||| | ||||||||||| |||||| |||| |||||| ||||||||
Sbjct: 116350 gaacatcaagacgatctcgtacgacgagaagaacaatgcggtgatggtgtcggggccgtt 116291

                                                                          
Query: 217    cgacgccgacaagctgtgcaggaagctctgctgcgaggccggccgggtgatcaaggagat 276
              ||||||||||||| |||||| |||||| |||||| |||||||| || | |||||||| ||
Sbjct: 116290 cgacgccgacaaggtgtgcaagaagctgtgctgcaaggccggcaggatcatcaaggacat 116231

                                
Query: 277    gcacgtcaacggcaagga 294
              ||| ||||| ||||||||
Sbjct: 116230 gcaggtcaagggcaagga 116213



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 71/84 (84%)
 Strand = Plus / Minus

                                                                          
Query: 66     agatctccacggttgtcctcaaagttgaccttgaatacgcccgatgctacaggaagatga 125
              |||||||||||||||| ||||| |||||||| |||| ||  |||||||||| |||||| |
Sbjct: 116738 agatctccacggttgtgctcaacgttgacctcgaatgcgatcgatgctacaagaagatca 116679

                                      
Query: 126    ggaaggtcctctgcaagatccaag 149
              | |  ||||| |||| ||||||||
Sbjct: 116678 gaagagtcctttgcaggatccaag 116655
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>ref|XM_468656.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1384

 Score =  101 bits (51), Expect = 2e-18
 Identities = 102/119 (85%)
 Strand = Plus / Plus

                                                                       
Query: 108 gatgctacaggaagatgaggaaggtcctctgcaagatccaagacaagatgaacatcaaga 167
           |||||||||||||||| || | ||||||||||||| ||||||| |||  || ||||||| 
Sbjct: 393 gatgctacaggaagatcagaagggtcctctgcaagctccaagataaggcgagcatcaagg 452

                                                                      
Query: 168 ccatctctttcgacgagaagagcaatgccgtgacggtgtccgggccgttcgacgccgac 226
           ||||||| | ||||||||||| |||  | ||||||||| | ||||||||||||||||||
Sbjct: 453 ccatctcgtacgacgagaagaacaacacggtgacggtggcggggccgttcgacgccgac 511
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>ref|XM_468655.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1091

 Score =  101 bits (51), Expect = 2e-18
 Identities = 102/119 (85%)
 Strand = Plus / Plus

                                                                       
Query: 108 gatgctacaggaagatgaggaaggtcctctgcaagatccaagacaagatgaacatcaaga 167
           |||||||||||||||| || | ||||||||||||| ||||||| |||  || ||||||| 
Sbjct: 100 gatgctacaggaagatcagaagggtcctctgcaagctccaagataaggcgagcatcaagg 159

                                                                      
Query: 168 ccatctctttcgacgagaagagcaatgccgtgacggtgtccgggccgttcgacgccgac 226
           ||||||| | ||||||||||| |||  | ||||||||| | ||||||||||||||||||
Sbjct: 160 ccatctcgtacgacgagaagaacaacacggtgacggtggcggggccgttcgacgccgac 218
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>dbj|AK071008.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080E10, full
           insert sequence
          Length = 1218

 Score =  101 bits (51), Expect = 2e-18
 Identities = 102/119 (85%)
 Strand = Plus / Plus

                                                                       
Query: 108 gatgctacaggaagatgaggaaggtcctctgcaagatccaagacaagatgaacatcaaga 167
           |||||||||||||||| || | ||||||||||||| ||||||| |||  || ||||||| 
Sbjct: 230 gatgctacaggaagatcagaagggtcctctgcaagctccaagataaggcgagcatcaagg 289

                                                                      
Query: 168 ccatctctttcgacgagaagagcaatgccgtgacggtgtccgggccgttcgacgccgac 226
           ||||||| | ||||||||||| |||  | ||||||||| | ||||||||||||||||||
Sbjct: 290 ccatctcgtacgacgagaagaacaacacggtgacggtggcggggccgttcgacgccgac 348
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>gb|AC120529.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBa0039N21, complete sequence
          Length = 151732

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                        
Query: 160  catcaagaccatctctttcgacgagaagagcaatgccgtgacggtgtccgggccgttcga 219
            ||||||| ||||||| | ||||||||||| |||  | ||||||||| | |||||||||||
Sbjct: 3489 catcaaggccatctcgtacgacgagaagaacaacacggtgacggtggcggggccgttcga 3548

                   
Query: 220  cgccgac 226
            |||||||
Sbjct: 3549 cgccgac 3555



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                      
Query: 108  gatgctacaggaagatgaggaaggtcctctgcaagatccaag 149
            |||||||||||||||| || | ||||||||||||| ||||||
Sbjct: 3363 gatgctacaggaagatcagaagggtcctctgcaagctccaag 3404
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>gb|AC092262.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C05
             map C12819S, complete sequence
          Length = 113266

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                         
Query: 160   catcaagaccatctctttcgacgagaagagcaatgccgtgacggtgtccgggccgttcga 219
             ||||||| ||||||| | ||||||||||| |||  | ||||||||| | |||||||||||
Sbjct: 98335 catcaaggccatctcgtacgacgagaagaacaacacggtgacggtggcggggccgttcga 98394

                    
Query: 220   cgccgac 226
             |||||||
Sbjct: 98395 cgccgac 98401



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                       
Query: 108   gatgctacaggaagatgaggaaggtcctctgcaagatccaag 149
             |||||||||||||||| || | ||||||||||||| ||||||
Sbjct: 98209 gatgctacaggaagatcagaagggtcctctgcaagctccaag 98250
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                            
Query: 160      catcaagaccatctctttcgacgagaagagcaatgccgtgacggtgtccgggccgttcga 219
                ||||||| ||||||| | ||||||||||| |||  | ||||||||| | |||||||||||
Sbjct: 16860485 catcaaggccatctcgtacgacgagaagaacaacacggtgacggtggcggggccgttcga 16860544

                       
Query: 220      cgccgac 226
                |||||||
Sbjct: 16860545 cgccgac 16860551



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                          
Query: 108      gatgctacaggaagatgaggaaggtcctctgcaagatccaag 149
                |||||||||||||||| || | ||||||||||||| ||||||
Sbjct: 16860359 gatgctacaggaagatcagaagggtcctctgcaagctccaag 16860400



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 313      aggcaaggacgacggcggcggcgag 337
                ||||||||||||||||| |||||||
Sbjct: 21932062 aggcaaggacgacggcgacggcgag 21932086
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                            
Query: 160      catcaagaccatctctttcgacgagaagagcaatgccgtgacggtgtccgggccgttcga 219
                ||||||| ||||||| | ||||||||||| |||  | ||||||||| | |||||||||||
Sbjct: 16854118 catcaaggccatctcgtacgacgagaagaacaacacggtgacggtggcggggccgttcga 16854177

                       
Query: 220      cgccgac 226
                |||||||
Sbjct: 16854178 cgccgac 16854184



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                          
Query: 108      gatgctacaggaagatgaggaaggtcctctgcaagatccaag 149
                |||||||||||||||| || | ||||||||||||| ||||||
Sbjct: 16853992 gatgctacaggaagatcagaagggtcctctgcaagctccaag 16854033



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 313      aggcaaggacgacggcggcggcgag 337
                ||||||||||||||||| |||||||
Sbjct: 21925091 aggcaaggacgacggcgacggcgag 21925115
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>ref|NM_184957.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1659

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 313 aggcaaggacgacggcggcggcgag 337
           ||||||||||||||||| |||||||
Sbjct: 813 aggcaaggacgacggcgacggcgag 837
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>gb|AC116523.7| Mus musculus chromosome 9, clone RP24-349L11, complete sequence
          Length = 184012

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 294    aacagaaggcggagtccaaaggcaa 318
              |||||||||| ||||||||||||||
Sbjct: 179908 aacagaaggcagagtccaaaggcaa 179932
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>gb|AC095036.2| Homo sapiens chromosome 1 clone RP11-320E2, complete sequence
          Length = 191499

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 136    ctgcaagatccaagacaagat 156
              |||||||||||||||||||||
Sbjct: 147946 ctgcaagatccaagacaagat 147966
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>gb|AC120537.6| Oryza sativa chromosome 3 BAC OSJNBb0042N11 genomic sequence, complete
             sequence
          Length = 127210

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 313   aggcaaggacgacggcggcggcgag 337
             ||||||||||||||||| |||||||
Sbjct: 76954 aggcaaggacgacggcgacggcgag 76930
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>dbj|AK069017.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170D06, full
           insert sequence
          Length = 1763

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 313 aggcaaggacgacggcggcggcgag 337
           ||||||||||||||||| |||||||
Sbjct: 863 aggcaaggacgacggcgacggcgag 887
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>gb|AC154277.1| Mus musculus BAC clone RP24-266G7 from 9, complete sequence
          Length = 168300

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 294    aacagaaggcggagtccaaaggcaa 318
              |||||||||| ||||||||||||||
Sbjct: 102239 aacagaaggcagagtccaaaggcaa 102263
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>ref|NM_103186.3| Arabidopsis thaliana unknown protein AT1G34630 mRNA, complete cds
          Length = 1860

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 320 gacgacggcggcggcgagaa 339
           ||||||||||||||||||||
Sbjct: 117 gacgacggcggcggcgagaa 98
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>ref|XM_474687.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1524

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 312  aaggcaaggacgacggcggcggcg 335
            ||||| ||||||||||||||||||
Sbjct: 1358 aaggcgaggacgacggcggcggcg 1335
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>ref|NM_197387.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBb0018B10.9), mRNA
          Length = 1218

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 320 gacgacggcggcggcgagaa 339
           ||||||||||||||||||||
Sbjct: 664 gacgacggcggcggcgagaa 683
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>gb|AC139170.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0058P12,
              complete sequence
          Length = 173073

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 316    caaggacgacggcggcggcg 335
              ||||||||||||||||||||
Sbjct: 131976 caaggacgacggcggcggcg 131957



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 320    gacgacggcggcggcgagaagcag 343
              |||| |||||||||||||||||||
Sbjct: 131969 gacggcggcggcggcgagaagcag 131946
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>gb|AC135794.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0084H09, complete sequence
          Length = 130151

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 318   aggacgacggcggcggcgag 337
             ||||||||||||||||||||
Sbjct: 29145 aggacgacggcggcggcgag 29126
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>gb|AC144452.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
             OSJNBa0025G07, complete sequence
          Length = 167136

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 278   cacgtcaacggcaaggaacagaag 301
             |||||||||||||||||| |||||
Sbjct: 79738 cacgtcaacggcaaggaagagaag 79761
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>ref|XM_726398.1| Aspergillus fumigatus Af293 hypothetical protein (Afu6g00650)
           partial mRNA
          Length = 795

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 254 gccggccgggtgatcaaggagatg 277
           |||| |||||||||||||||||||
Sbjct: 540 gccgaccgggtgatcaaggagatg 517
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>gb|AC051634.6| Oryza sativa chromosome 10 BAC OSJNBb0018B10 genomic sequence, complete
             sequence
          Length = 135789

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 320   gacgacggcggcggcgagaa 339
             ||||||||||||||||||||
Sbjct: 47661 gacgacggcggcggcgagaa 47680
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>gb|AY064983.1| Arabidopsis thaliana At1g34630/F12K21.3 mRNA, complete cds
          Length = 1769

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 320 gacgacggcggcggcgagaa 339
           ||||||||||||||||||||
Sbjct: 117 gacgacggcggcggcgagaa 98
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 322     cgacggcggcggcgagaagc 341
               ||||||||||||||||||||
Sbjct: 1344747 cgacggcggcggcgagaagc 1344766
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>gb|AF332175.1|AF332175 Zea mays beta-expansin 2 (expB2) mRNA, partial cds
          Length = 907

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 316 caaggacgacggcggcggcg 335
           ||||||||||||||||||||
Sbjct: 660 caaggacgacggcggcggcg 641
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 312     aaggcaaggacgacggcggcggcg 335
               ||||| ||||||||||||||||||
Sbjct: 5614287 aaggcgaggacgacggcggcggcg 5614264
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 320     gacgacggcggcggcgagaagcag 343
               |||| |||||||||||||||||||
Sbjct: 4862924 gacggcggcggcggcgagaagcag 4862947



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 316     caaggacgacggcggcggcg 335
               ||||||||||||||||||||
Sbjct: 4862917 caaggacgacggcggcggcg 4862936



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 318     aggacgacggcggcggcgag 337
               ||||||||||||||||||||
Sbjct: 4057483 aggacgacggcggcggcgag 4057464
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 320      gacgacggcggcggcgagaa 339
                ||||||||||||||||||||
Sbjct: 19590470 gacgacggcggcggcgagaa 19590489
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 319     ggacgacggcggcggcgaga 338
               ||||||||||||||||||||
Sbjct: 5170470 ggacgacggcggcggcgaga 5170451
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 278      cacgtcaacggcaaggaacagaag 301
                |||||||||||||||||| |||||
Sbjct: 12202626 cacgtcaacggcaaggaagagaag 12202649
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>emb|BX814199.1|CNS0AC8C Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB60ZE05 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1573

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 320 gacgacggcggcggcgagaa 339
           ||||||||||||||||||||
Sbjct: 21  gacgacggcggcggcgagaa 2
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>gb|AC069213.22| Homo sapiens 3 BAC RP11-338O10 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 171460

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 157    gaacatcaagaccatctctt 176
              ||||||||||||||||||||
Sbjct: 115548 gaacatcaagaccatctctt 115529
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 249    gcgaggccggccgggtgatc 268
              ||||||||||||||||||||
Sbjct: 952955 gcgaggccggccgggtgatc 952936
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>gb|AC023279.2|AC023279 Genomic sequence for Arabidopsis thaliana BAC F12K21 from chromosome
            I, complete sequence
          Length = 117585

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 320  gacgacggcggcggcgagaa 339
            ||||||||||||||||||||
Sbjct: 8596 gacgacggcggcggcgagaa 8615
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>dbj|AP003946.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OJ1147_D11
          Length = 138444

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 319    ggacgacggcggcggcgaga 338
              ||||||||||||||||||||
Sbjct: 129508 ggacgacggcggcggcgaga 129489
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>dbj|AP004991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0016O19
          Length = 169120

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 319   ggacgacggcggcggcgaga 338
             ||||||||||||||||||||
Sbjct: 37192 ggacgacggcggcggcgaga 37173
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>dbj|AP005105.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0052O11
          Length = 106467

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 318   aggacgacggcggcggcgag 337
             ||||||||||||||||||||
Sbjct: 40114 aggacgacggcggcggcgag 40095
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>dbj|AP004573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0678G09
          Length = 139220

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 318  aggacgacggcggcggcgag 337
            ||||||||||||||||||||
Sbjct: 6403 aggacgacggcggcggcgag 6384
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>dbj|AK120960.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039K16, full
           insert sequence
          Length = 765

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 320 gacgacggcggcggcgagaagcag 343
           |||| |||||||||||||||||||
Sbjct: 338 gacggcggcggcggcgagaagcag 361



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 316 caaggacgacggcggcggcg 335
           ||||||||||||||||||||
Sbjct: 331 caaggacgacggcggcggcg 350
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>dbj|AK100605.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107G12, full
           insert sequence
          Length = 2461

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 318 aggacgacggcggcggcgag 337
           ||||||||||||||||||||
Sbjct: 182 aggacgacggcggcggcgag 163
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>dbj|AK069594.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023024A01, full
           insert sequence
          Length = 665

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 318 aggacgacggcggcggcgag 337
           ||||||||||||||||||||
Sbjct: 377 aggacgacggcggcggcgag 396
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>dbj|AK062755.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-G07, full
           insert sequence
          Length = 864

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 319 ggacgacggcggcggcgaga 338
           ||||||||||||||||||||
Sbjct: 501 ggacgacggcggcggcgaga 482
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>gb|AC007894.2|F21H2 Arabidopsis thaliana chromosome 1 BAC F21H2 sequence, complete sequence
          Length = 88512

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 320   gacgacggcggcggcgagaa 339
             ||||||||||||||||||||
Sbjct: 72872 gacgacggcggcggcgagaa 72891
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 320      gacgacggcggcggcgagaa 339
                ||||||||||||||||||||
Sbjct: 19601746 gacgacggcggcggcgagaa 19601765
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 320     gacgacggcggcggcgagaagcag 343
               |||| |||||||||||||||||||
Sbjct: 4881708 gacggcggcggcggcgagaagcag 4881731



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 316     caaggacgacggcggcggcg 335
               ||||||||||||||||||||
Sbjct: 4881701 caaggacgacggcggcggcg 4881720



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 318     aggacgacggcggcggcgag 337
               ||||||||||||||||||||
Sbjct: 4066177 aggacgacggcggcggcgag 4066158
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>emb|AL662994.3|OSJN00192 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0006L01,
             complete sequence
          Length = 162227

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 312   aaggcaaggacgacggcggcggcg 335
             ||||| ||||||||||||||||||
Sbjct: 71494 aaggcgaggacgacggcggcggcg 71471


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,166,410
Number of Sequences: 3902068
Number of extensions: 3166410
Number of successful extensions: 88777
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87315
Number of HSP's gapped (non-prelim): 1462
length of query: 419
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 397
effective length of database: 17,147,199,772
effective search space: 6807438309484
effective search space used: 6807438309484
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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