ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast52a12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_477023.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.007
2ref|XM_477015.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.007
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
4dbj|AP005257.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
5dbj|AP005259.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.027
7dbj|AP002883.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.027
8ref|XM_467877.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.42
9gb|AC151339.2| Xenopus tropicalis clone ISB-349A23, complete seq... 44 0.42
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.42
11dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 44 0.42
12dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.42
13dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.42
14dbj|AK063605.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.42
15gb|J03176.1|RHBFBC B.japonicum fbcF and fbcH genes encoding Ries... 44 0.42
16emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete ... 42 1.7
17gb|DQ397852.1| Cenarchaeum symbiosum clone C15D08, complete sequ... 42 1.7
18gb|DQ397850.1| Cenarchaeum symbiosum clone C09B07, complete sequ... 42 1.7
19dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.7
20dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 42 1.7
21ref|NM_188724.1| Oryza sativa (japonica cultivar-group), predic... 40 6.6
22ref|XM_477138.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.6
23gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 6.6
24gb|AC136491.4| Oryza sativa (japonica cultivar-group) chromosome... 40 6.6
25emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 6.6
26gb|AC091623.2| Sus scrofa clone RP44-183E24, complete sequence 40 6.6
27ref|XM_965170.1| PREDICTED: Tribolium castaneum similar to CG834... 40 6.6
28emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB 40 6.6
29gb|AE011635.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 6.6
30dbj|AB239801.1| Oryza sativa (japonica cultivar-group) OsIPT5 ge... 40 6.6
31gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 6.6
32gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 6.6
33dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
34dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
35gb|AC068205.25| Homo sapiens chromosome 11, clone RP11-472I20, c... 40 6.6
36dbj|AP003201.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
37dbj|AP005779.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
38dbj|AP006158.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
39dbj|AP006064.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
40gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.6 
>ref|XM_477023.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1290

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 288 tgggacgacgccatcgcctacgtctcccgcttcctgc 324
           |||||||||||||||| |||| ||| |||||||||||
Sbjct: 217 tgggacgacgccatcggctacatctgccgcttcctgc 253



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 161 ccgccaccgccggctcgccacctacctctgtctccacggcttccg 205
           |||||||||||| |||  ||||| |||||| ||||||||||||||
Sbjct: 90  ccgccaccgccgcctcctcaccttcctctggctccacggcttccg 134
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>ref|XM_477015.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 831

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 288 tgggacgacgccatcgcctacgtctcccgcttcctgc 324
           |||||||||||||||| |||| ||| |||||||||||
Sbjct: 217 tgggacgacgccatcggctacatctgccgcttcctgc 253



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 161 ccgccaccgccggctcgccacctacctctgtctccacggcttccg 205
           |||||||||||| |||  ||||| |||||| ||||||||||||||
Sbjct: 90  ccgccaccgccgcctcctcaccttcctctggctccacggcttccg 134
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                    
Query: 288     tgggacgacgccatcgcctacgtctcccgcttcctgc 324
               |||||||||||||||| |||| ||| |||||||||||
Sbjct: 5464001 tgggacgacgccatcggctacatctgccgcttcctgc 5464037



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                            
Query: 161     ccgccaccgccggctcgccacctacctctgtctccacggcttccg 205
               |||||||||||| |||  ||||| |||||| ||||||||||||||
Sbjct: 5463794 ccgccaccgccgcctcctcaccttcctctggctccacggcttccg 5463838



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                            
Query: 161     ccgccaccgccggctcgccacctacctctgtctccacggcttccg 205
               |||||||||||| |||  ||||| |||||| ||||||||||||||
Sbjct: 5385602 ccgccaccgccgcctcctcaccttcctctggctccacggcttccg 5385558



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                    
Query: 288     tgggacgacgccatcgcctacgtctcccgcttcctgc 324
               |||||||||||||||| |||| ||| |||||||||||
Sbjct: 5385395 tgggacgacgccatcggctacatctgccgcttcctgc 5385359



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 153     cgccggtgccgccaccgccg 172
               ||||||||||||||||||||
Sbjct: 6123123 cgccggtgccgccaccgccg 6123142
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>dbj|AP005257.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0417F02
          Length = 150660

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                           
Query: 161    ccgccaccgccggctcgccacctacctctgtctccacggcttccg 205
              |||||||||||| |||  ||||| |||||| ||||||||||||||
Sbjct: 119966 ccgccaccgccgcctcctcaccttcctctggctccacggcttccg 119922



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                   
Query: 288    tgggacgacgccatcgcctacgtctcccgcttcctgc 324
              |||||||||||||||| |||| ||| |||||||||||
Sbjct: 119759 tgggacgacgccatcggctacatctgccgcttcctgc 119723
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>dbj|AP005259.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0519E02
          Length = 139321

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 288   tgggacgacgccatcgcctacgtctcccgcttcctgc 324
             |||||||||||||||| |||| ||| |||||||||||
Sbjct: 97982 tgggacgacgccatcggctacatctgccgcttcctgc 98018



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                          
Query: 161   ccgccaccgccggctcgccacctacctctgtctccacggcttccg 205
             |||||||||||| |||  ||||| |||||| ||||||||||||||
Sbjct: 97775 ccgccaccgccgcctcctcaccttcctctggctccacggcttccg 97819



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                          
Query: 161   ccgccaccgccggctcgccacctacctctgtctccacggcttccg 205
             |||||||||||| |||  ||||| |||||| ||||||||||||||
Sbjct: 19583 ccgccaccgccgcctcctcaccttcctctggctccacggcttccg 19539



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                  
Query: 288   tgggacgacgccatcgcctacgtctcccgcttcctgc 324
             |||||||||||||||| |||| ||| |||||||||||
Sbjct: 19376 tgggacgacgccatcggctacatctgccgcttcctgc 19340
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 359      ggtgctcctccacttcctcatgcaccac 386
                |||||||||||||| |||||||||||||
Sbjct: 10957832 ggtgctcctccactgcctcatgcaccac 10957805



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 153     cgccggtgccgccaccgccg 172
               ||||||||||||||||||||
Sbjct: 7869901 cgccggtgccgccaccgccg 7869920
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>dbj|AP002883.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0487H02
          Length = 145491

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 359   ggtgctcctccacttcctcatgcaccac 386
             |||||||||||||| |||||||||||||
Sbjct: 60674 ggtgctcctccactgcctcatgcaccac 60647
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>ref|XM_467877.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1222

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 394 tcgccagcatggtcgccggcgt 415
           ||||||||||||||||||||||
Sbjct: 805 tcgccagcatggtcgccggcgt 826
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>gb|AC151339.2| Xenopus tropicalis clone ISB-349A23, complete sequence
          Length = 78492

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 455   cacgtacctcagcacgacgact 476
             ||||||||||||||||||||||
Sbjct: 10804 cacgtacctcagcacgacgact 10783
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 394      tcgccagcatggtcgccggcgt 415
                ||||||||||||||||||||||
Sbjct: 31859457 tcgccagcatggtcgccggcgt 31859436
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 336     gatccgcagagcgacgaggccc 357
               ||||||||||||||||||||||
Sbjct: 2708272 gatccgcagagcgacgaggccc 2708293
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>dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0471A11
          Length = 157740

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 394   tcgccagcatggtcgccggcgt 415
             ||||||||||||||||||||||
Sbjct: 20458 tcgccagcatggtcgccggcgt 20437
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>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0627E03
          Length = 159861

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 394    tcgccagcatggtcgccggcgt 415
              ||||||||||||||||||||||
Sbjct: 155255 tcgccagcatggtcgccggcgt 155234
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>dbj|AK063605.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-C09, full
           insert sequence
          Length = 1222

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 394 tcgccagcatggtcgccggcgt 415
           ||||||||||||||||||||||
Sbjct: 805 tcgccagcatggtcgccggcgt 826
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>gb|J03176.1|RHBFBC B.japonicum fbcF and fbcH genes encoding Rieske iron-sulfur protein
           and cytochromes b and c1, complete cds
          Length = 2896

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 336 gatccgcagagcgacgaggccc 357
           ||||||||||||||||||||||
Sbjct: 434 gatccgcagagcgacgaggccc 455
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>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29
          Length = 293050

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 153    cgccggtgccgccaccgccgg 173
              |||||||||||||||||||||
Sbjct: 149933 cgccggtgccgccaccgccgg 149913
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>gb|DQ397852.1| Cenarchaeum symbiosum clone C15D08, complete sequence
          Length = 38754

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 404  ggtcgccggcgtgcctgaccg 424
            |||||||||||||||||||||
Sbjct: 5680 ggtcgccggcgtgcctgaccg 5660
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>gb|DQ397850.1| Cenarchaeum symbiosum clone C09B07, complete sequence
          Length = 40824

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 404   ggtcgccggcgtgcctgaccg 424
             |||||||||||||||||||||
Sbjct: 37802 ggtcgccggcgtgcctgaccg 37822
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 197     cggcttccgcgacgccctgcg 217
               |||||||||||||||||||||
Sbjct: 8306570 cggcttccgcgacgccctgcg 8306590



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 48      cctcgccggcgccgtgatcg 67
               ||||||||||||||||||||
Sbjct: 5612915 cctcgccggcgccgtgatcg 5612896
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 152    tcgccggtgccgccaccgccg 172
              |||||||||||||||||||||
Sbjct: 729690 tcgccggtgccgccaccgccg 729670
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>ref|NM_188724.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2559

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 153 cgccggtgccgccaccgccg 172
           ||||||||||||||||||||
Sbjct: 360 cgccggtgccgccaccgccg 341
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>ref|XM_477138.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1044

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 153 cgccggtgccgccaccgccg 172
           ||||||||||||||||||||
Sbjct: 980 cgccggtgccgccaccgccg 999
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 387    gccgccttcgccagcatggtcgcc 410
              ||||||||||||||| ||||||||
Sbjct: 977197 gccgccttcgccagcctggtcgcc 977174
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>gb|AC136491.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0062E06,
              complete sequence
          Length = 158842

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 151    ttcgccggtgccgccaccgccggc 174
              |||||||| |||||||||||||||
Sbjct: 105382 ttcgccggcgccgccaccgccggc 105359
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 394    tcgccagcatggtcgccggcgtgc 417
              |||||||||||||||||| |||||
Sbjct: 114519 tcgccagcatggtcgccgacgtgc 114496
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>gb|AC091623.2| Sus scrofa clone RP44-183E24, complete sequence
          Length = 200062

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 311    ctcccgcttcctgcgcccgg 330
              ||||||||||||||||||||
Sbjct: 138439 ctcccgcttcctgcgcccgg 138458
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>ref|XM_965170.1| PREDICTED: Tribolium castaneum similar to CG8340-PA (LOC658813),
           mRNA
          Length = 1104

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 152 tcgccggtgccgccaccgcc 171
           ||||||||||||||||||||
Sbjct: 161 tcgccggtgccgccaccgcc 142
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>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB
          Length = 1683333

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 153     cgccggtgccgccaccgccg 172
               ||||||||||||||||||||
Sbjct: 1083725 cgccggtgccgccaccgccg 1083706
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>gb|AE011635.1| Xanthomonas axonopodis pv. citri str. 306,  section 13 of 469 of the
            complete genome
          Length = 11848

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 394  tcgccagcatggtcgccggcgtgc 417
            |||||||||||||||||| |||||
Sbjct: 7245 tcgccagcatggtcgccgacgtgc 7222
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>dbj|AB239801.1| Oryza sativa (japonica cultivar-group) OsIPT5 gene for adenylate
           isopentenyltransferase, complete cds
          Length = 1044

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 153 cgccggtgccgccaccgccg 172
           ||||||||||||||||||||
Sbjct: 980 cgccggtgccgccaccgccg 999
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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete
              genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 196    acggcttccgcgacgccctg 215
              ||||||||||||||||||||
Sbjct: 180384 acggcttccgcgacgccctg 180365
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 386     cgccgccttcgccagcatggtcgccggc 413
               ||||||||||||| ||||| ||||||||
Sbjct: 5107286 cgccgccttcgccggcatgttcgccggc 5107313
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 151      ttcgccggtgccgccaccgccggc 174
                |||||||| |||||||||||||||
Sbjct: 17815731 ttcgccggcgccgccaccgccggc 17815708
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 153      cgccggtgccgccaccgccg 172
                ||||||||||||||||||||
Sbjct: 10064290 cgccggtgccgccaccgccg 10064309
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>gb|AC068205.25| Homo sapiens chromosome 11, clone RP11-472I20, complete sequence
          Length = 205069

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 354    gcccaggtgctcctccactt 373
              ||||||||||||||||||||
Sbjct: 123056 gcccaggtgctcctccactt 123037
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>dbj|AP003201.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1066G12
          Length = 136263

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   cgccggtgccgccaccgccg 172
             ||||||||||||||||||||
Sbjct: 64847 cgccggtgccgccaccgccg 64866
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>dbj|AP005779.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0042J07
          Length = 126938

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   cgccggtgccgccaccgccg 172
             ||||||||||||||||||||
Sbjct: 26133 cgccggtgccgccaccgccg 26152
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>dbj|AP006158.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1127C04
          Length = 121441

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 153    cgccggtgccgccaccgccg 172
              ||||||||||||||||||||
Sbjct: 104192 cgccggtgccgccaccgccg 104211
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>dbj|AP006064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0023I13
          Length = 165911

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   cgccggtgccgccaccgccg 172
             ||||||||||||||||||||
Sbjct: 23636 cgccggtgccgccaccgccg 23655
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 151      ttcgccggtgccgccaccgccggc 174
                |||||||| |||||||||||||||
Sbjct: 17910047 ttcgccggcgccgccaccgccggc 17910024


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,954,252
Number of Sequences: 3902068
Number of extensions: 2954252
Number of successful extensions: 76395
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75336
Number of HSP's gapped (non-prelim): 1059
length of query: 487
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 465
effective length of database: 17,147,199,772
effective search space: 7973447893980
effective search space used: 7973447893980
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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