ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast52a10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YFK5_SCHPO (P87132) Hypothetical protein C167.05 in chromosome I 36 0.051
2IMPX_YEAST (P32351) Sugar utilization regulatory protein IMP2 29 8.2

>YFK5_SCHPO (P87132) Hypothetical protein C167.05 in chromosome I|
          Length = 601

 Score = 36.2 bits (82), Expect = 0.051
 Identities = 18/47 (38%), Positives = 28/47 (59%)
 Frame = +3

Query: 6   FSSLAASSSPHRRIAIAVDLSDESAFAVKWAVQNYLRPGDAVVLLHV 146
           F + A+SS  +    + +DLS ES  A +WAV   LR GD ++++ V
Sbjct: 420 FQTAASSSKRNCTYFLTLDLSSESLHAAEWAVGILLRNGDTLIIVDV 466



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>IMPX_YEAST (P32351) Sugar utilization regulatory protein IMP2|
          Length = 346

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +3

Query: 21  ASSSPHRRIAIAVDLSDESAFAVKWAVQNYLRPGDAVVLLHVRPT 155
           A +   R   +  DLS ES +A+ + +   +  GD V ++H  P+
Sbjct: 204 AEAGNQRSFILYTDLSSESTYALTYLMGAAVNQGDTVYIVHWEPS 248


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,894,747
Number of Sequences: 219361
Number of extensions: 418225
Number of successful extensions: 1352
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1352
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3638905326
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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