ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast52a10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017K09, complete sequence Length = 155525 Score = 392 bits (198), Expect = e-106 Identities = 236/246 (95%), Gaps = 2/246 (0%) Strand = Plus / Plus Query: 260 gaagaagcgggaggaggacttcgacgccttcacctccaccaagtcgcaggacctggcgca 319 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 65720 gaagaagcgggaggaggacttcgacgccttcacctccaccaaggcgcaggacctggcgca 65779 Query: 320 gccgctcgtcgccgcgcagatccccttcaagatccacatcgtcaaggaccacgacatgaa 379 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 65780 gccgctcgtcgccgcgcagatccccttcaagatccacatagtcaaggaccacgacatgaa 65839 Query: 380 ggagcgcctctgcctcgaggccgagcgcctcggcctctccgccatgatcatgggcagccg 439 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 65840 ggagcgcctctgcctcgaggccgagcgcctcggcctgtccgccatgatcatgggcagccg 65899 Query: 440 cggcttcggcgcctcccgcagg-ctggcac-ggcaggctcgggagtgtcagcgactactg 497 ||||||||||||||| |||||| | |||| || ||||||||||| |||||||||||||| Sbjct: 65900 cggcttcggcgcctcgcgcagggcgggcaaagggaggctcgggagcgtcagcgactactg 65959 Query: 498 cgtgca 503 |||||| Sbjct: 65960 cgtgca 65965 Score = 319 bits (161), Expect = 5e-84 Identities = 170/173 (98%) Strand = Plus / Plus Query: 33 ccgcaccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtcaag 92 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65472 ccgcaccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtcaag 65531 Query: 93 tgggccgtgcagaactacctgcgcccgggcgacgccgtcgtgctcctccacgtgcgcccc 152 ||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 65532 tggtccgtgcagaactacctccgcccgggcgacgccgtcgtgctcctccacgtccgcccc 65591 Query: 153 acctccgtgctctacggcgccgactggggctccatccccgtctccgtcgacga 205 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65592 acctccgtgctctacggcgccgactggggctccatccccgtctccgtcgacga 65644
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 392 bits (198), Expect = e-106 Identities = 236/246 (95%), Gaps = 2/246 (0%) Strand = Plus / Plus Query: 260 gaagaagcgggaggaggacttcgacgccttcacctccaccaagtcgcaggacctggcgca 319 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 24551538 gaagaagcgggaggaggacttcgacgccttcacctccaccaaggcgcaggacctggcgca 24551597 Query: 320 gccgctcgtcgccgcgcagatccccttcaagatccacatcgtcaaggaccacgacatgaa 379 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 24551598 gccgctcgtcgccgcgcagatccccttcaagatccacatagtcaaggaccacgacatgaa 24551657 Query: 380 ggagcgcctctgcctcgaggccgagcgcctcggcctctccgccatgatcatgggcagccg 439 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 24551658 ggagcgcctctgcctcgaggccgagcgcctcggcctgtccgccatgatcatgggcagccg 24551717 Query: 440 cggcttcggcgcctcccgcagg-ctggcac-ggcaggctcgggagtgtcagcgactactg 497 ||||||||||||||| |||||| | |||| || ||||||||||| |||||||||||||| Sbjct: 24551718 cggcttcggcgcctcgcgcagggcgggcaaagggaggctcgggagcgtcagcgactactg 24551777 Query: 498 cgtgca 503 |||||| Sbjct: 24551778 cgtgca 24551783 Score = 319 bits (161), Expect = 5e-84 Identities = 170/173 (98%) Strand = Plus / Plus Query: 33 ccgcaccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtcaag 92 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24551290 ccgcaccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtcaag 24551349 Query: 93 tgggccgtgcagaactacctgcgcccgggcgacgccgtcgtgctcctccacgtgcgcccc 152 ||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 24551350 tggtccgtgcagaactacctccgcccgggcgacgccgtcgtgctcctccacgtccgcccc 24551409 Query: 153 acctccgtgctctacggcgccgactggggctccatccccgtctccgtcgacga 205 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24551410 acctccgtgctctacggcgccgactggggctccatccccgtctccgtcgacga 24551462 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 33 ccgcaccgccgcatcgccatcgcc 56 |||||||||||| ||||||||||| Sbjct: 4040307 ccgcaccgccgcctcgccatcgcc 4040284
>dbj|AK060312.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-C02, full insert sequence Length = 1118 Score = 392 bits (198), Expect = e-106 Identities = 236/246 (95%), Gaps = 2/246 (0%) Strand = Plus / Plus Query: 260 gaagaagcgggaggaggacttcgacgccttcacctccaccaagtcgcaggacctggcgca 319 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 504 gaagaagcgggaggaggacttcgacgccttcacctccaccaaggcgcaggacctggcgca 563 Query: 320 gccgctcgtcgccgcgcagatccccttcaagatccacatcgtcaaggaccacgacatgaa 379 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 564 gccgctcgtcgccgcgcagatccccttcaagatccacatagtcaaggaccacgacatgaa 623 Query: 380 ggagcgcctctgcctcgaggccgagcgcctcggcctctccgccatgatcatgggcagccg 439 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 624 ggagcgcctctgcctcgaggccgagcgcctcggcctgtccgccatgatcatgggcagccg 683 Query: 440 cggcttcggcgcctcccgcagg-ctggcac-ggcaggctcgggagtgtcagcgactactg 497 ||||||||||||||| |||||| | |||| || ||||||||||| |||||||||||||| Sbjct: 684 cggcttcggcgcctcgcgcagggcgggcaaagggaggctcgggagcgtcagcgactactg 743 Query: 498 cgtgca 503 |||||| Sbjct: 744 cgtgca 749 Score = 319 bits (161), Expect = 5e-84 Identities = 170/173 (98%) Strand = Plus / Plus Query: 33 ccgcaccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtcaag 92 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 256 ccgcaccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtcaag 315 Query: 93 tgggccgtgcagaactacctgcgcccgggcgacgccgtcgtgctcctccacgtgcgcccc 152 ||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 316 tggtccgtgcagaactacctccgcccgggcgacgccgtcgtgctcctccacgtccgcccc 375 Query: 153 acctccgtgctctacggcgccgactggggctccatccccgtctccgtcgacga 205 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 acctccgtgctctacggcgccgactggggctccatccccgtctccgtcgacga 428
>gb|AY104923.1| Zea mays PCO144363 mRNA sequence Length = 982 Score = 299 bits (151), Expect = 5e-78 Identities = 223/246 (90%), Gaps = 2/246 (0%) Strand = Plus / Plus Query: 260 gaagaagcgggaggaggacttcgacgccttcacctccaccaagtcgcaggacctggcgca 319 |||||||||||||||||| |||||| ||||||| ||||| ||| |||||||||| ||||| Sbjct: 103 gaagaagcgggaggaggagttcgactccttcacgtccactaaggcgcaggaccttgcgca 162 Query: 320 gccgctcgtcgccgcgcagatccccttcaagatccacatcgtcaaggaccacgacatgaa 379 |||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 163 gccgctggtcggcgcgcagatccccttcaagatccacatcgtcaaagaccacgacatgaa 222 Query: 380 ggagcgcctctgcctcgaggccgagcgcctcggcctctccgccatgatcatgggcagccg 439 |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 223 ggagcgcctctgcctcgaggccgagcgcctcggcctgtccgcgatgatcatgggcagccg 282 Query: 440 cggcttcggcgcctcccgcagg--ctggcacggcaggctcgggagtgtcagcgactactg 497 || ||||| ||||| |||||| | || | || ||||||||||| ||||| |||||||| Sbjct: 283 gggattcggtgcctcgcgcagggtcgggaaagggaggctcgggagcgtcagtgactactg 342 Query: 498 cgtgca 503 |||||| Sbjct: 343 cgtgca 348 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 176 ctggggctccatccccgtctccgtcgacga 205 ||||||||||||||| |||||||||||||| Sbjct: 1 ctggggctccatcccggtctccgtcgacga 30
>gb|BT017743.1| Zea mays clone EL01N0449E08.c mRNA sequence Length = 1322 Score = 281 bits (142), Expect = 1e-72 Identities = 184/198 (92%) Strand = Plus / Plus Query: 260 gaagaagcgggaggaggacttcgacgccttcacctccaccaagtcgcaggacctggcgca 319 |||||| ||||||||||||| |||||||||||||||||||||| |||||||||| ||||| Sbjct: 535 gaagaaacgggaggaggactacgacgccttcacctccaccaaggcgcaggacctcgcgca 594 Query: 320 gccgctcgtcgccgcgcagatccccttcaagatccacatcgtcaaggaccacgacatgaa 379 ||||| |||| ||| ||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 595 accgctggtcgacgcccagatccccttcaagatccacgtcgtcaaggaccacgacatgaa 654 Query: 380 ggagcgcctctgcctcgaggccgagcgcctcggcctctccgccatgatcatgggcagccg 439 ||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||| Sbjct: 655 ggagcgcctctgcctcgaggctgagcgccttggcctctccgccatgatcatggggagccg 714 Query: 440 cggcttcggcgcctcccg 457 ||| ||||| |||||||| Sbjct: 715 cggtttcggggcctcccg 732 Score = 240 bits (121), Expect = 4e-60 Identities = 157/169 (92%) Strand = Plus / Plus Query: 33 ccgcaccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtcaag 92 |||||||| ||||||||||||||||| || ||||||||||||||||||||||| |||||| Sbjct: 296 ccgcaccgtcgcatcgccatcgccgttgatctctccgacgagtccgccttcgcagtcaag 355 Query: 93 tgggccgtgcagaactacctgcgcccgggcgacgccgtcgtgctcctccacgtgcgcccc 152 |||||||||||||||||| | ||||| || |||||||||||||| ||||||||||||||| Sbjct: 356 tgggccgtgcagaactacgtccgccccggggacgccgtcgtgctgctccacgtgcgcccc 415 Query: 153 acctccgtgctctacggcgccgactggggctccatccccgtctccgtcg 201 |||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 416 acctccgtcctctacggcgccgactggggttccatcccggtctccgtcg 464
>ref|NM_191514.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 819 Score = 276 bits (139), Expect = 7e-71 Identities = 181/195 (92%) Strand = Plus / Plus Query: 260 gaagaagcgggaggaggacttcgacgccttcacctccaccaagtcgcaggacctggcgca 319 ||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||| Sbjct: 393 gaagaagcgggaggaggacttcgacgccttcacgtccaccaaggcggaggacctggcgca 452 Query: 320 gccgctcgtcgccgcgcagatccccttcaagatccacatcgtcaaggaccacgacatgaa 379 |||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 453 gccgctggtcgacgcgcagatcccctttaagatccacgtcgtcaaggaccacgacatgaa 512 Query: 380 ggagcgcctctgcctcgaggccgagcgcctcggcctctccgccatgatcatgggcagccg 439 ||||||||||||||||||||||||||| || ||| | ||||| ||||||||||| ||||| Sbjct: 513 ggagcgcctctgcctcgaggccgagcgacttggcttgtccgctatgatcatgggaagccg 572 Query: 440 cggcttcggcgcctc 454 ||||||||| ||||| Sbjct: 573 cggcttcggtgcctc 587 Score = 262 bits (132), Expect = 1e-66 Identities = 159/168 (94%) Strand = Plus / Plus Query: 33 ccgcaccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtcaag 92 |||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| | Sbjct: 172 ccgcaccggcgcatcgccatcgccgtcgacctctccgacgagtccgcgtacgccgtccgg 231 Query: 93 tgggccgtgcagaactacctgcgcccgggcgacgccgtcgtgctcctccacgtgcgcccc 152 |||||||||||||||||||| ||||| || |||||||||||||||||||||||||| ||| Sbjct: 232 tgggccgtgcagaactacctccgccccggggacgccgtcgtgctcctccacgtgcggccc 291 Query: 153 acctccgtgctctacggcgccgactggggctccatccccgtctccgtc 200 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 292 acctccgtgctctacggcgccgactggggctccatccccgtctccgtc 339
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 276 bits (139), Expect = 7e-71 Identities = 181/195 (92%) Strand = Plus / Minus Query: 260 gaagaagcgggaggaggacttcgacgccttcacctccaccaagtcgcaggacctggcgca 319 ||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||| Sbjct: 33194351 gaagaagcgggaggaggacttcgacgccttcacgtccaccaaggcggaggacctggcgca 33194292 Query: 320 gccgctcgtcgccgcgcagatccccttcaagatccacatcgtcaaggaccacgacatgaa 379 |||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 33194291 gccgctggtcgacgcgcagatcccctttaagatccacgtcgtcaaggaccacgacatgaa 33194232 Query: 380 ggagcgcctctgcctcgaggccgagcgcctcggcctctccgccatgatcatgggcagccg 439 ||||||||||||||||||||||||||| || ||| | ||||| ||||||||||| ||||| Sbjct: 33194231 ggagcgcctctgcctcgaggccgagcgacttggcttgtccgctatgatcatgggaagccg 33194172 Query: 440 cggcttcggcgcctc 454 ||||||||| ||||| Sbjct: 33194171 cggcttcggtgcctc 33194157 Score = 262 bits (132), Expect = 1e-66 Identities = 159/168 (94%) Strand = Plus / Minus Query: 33 ccgcaccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtcaag 92 |||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| | Sbjct: 33194572 ccgcaccggcgcatcgccatcgccgtcgacctctccgacgagtccgcgtacgccgtccgg 33194513 Query: 93 tgggccgtgcagaactacctgcgcccgggcgacgccgtcgtgctcctccacgtgcgcccc 152 |||||||||||||||||||| ||||| || |||||||||||||||||||||||||| ||| Sbjct: 33194512 tgggccgtgcagaactacctccgccccggggacgccgtcgtgctcctccacgtgcggccc 33194453 Query: 153 acctccgtgctctacggcgccgactggggctccatccccgtctccgtc 200 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33194452 acctccgtgctctacggcgccgactggggctccatccccgtctccgtc 33194405
>dbj|AP003368.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1100D10 Length = 152997 Score = 276 bits (139), Expect = 7e-71 Identities = 181/195 (92%) Strand = Plus / Minus Query: 260 gaagaagcgggaggaggacttcgacgccttcacctccaccaagtcgcaggacctggcgca 319 ||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||| Sbjct: 131261 gaagaagcgggaggaggacttcgacgccttcacgtccaccaaggcggaggacctggcgca 131202 Query: 320 gccgctcgtcgccgcgcagatccccttcaagatccacatcgtcaaggaccacgacatgaa 379 |||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 131201 gccgctggtcgacgcgcagatcccctttaagatccacgtcgtcaaggaccacgacatgaa 131142 Query: 380 ggagcgcctctgcctcgaggccgagcgcctcggcctctccgccatgatcatgggcagccg 439 ||||||||||||||||||||||||||| || ||| | ||||| ||||||||||| ||||| Sbjct: 131141 ggagcgcctctgcctcgaggccgagcgacttggcttgtccgctatgatcatgggaagccg 131082 Query: 440 cggcttcggcgcctc 454 ||||||||| ||||| Sbjct: 131081 cggcttcggtgcctc 131067 Score = 262 bits (132), Expect = 1e-66 Identities = 159/168 (94%) Strand = Plus / Minus Query: 33 ccgcaccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtcaag 92 |||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| | Sbjct: 131482 ccgcaccggcgcatcgccatcgccgtcgacctctccgacgagtccgcgtacgccgtccgg 131423 Query: 93 tgggccgtgcagaactacctgcgcccgggcgacgccgtcgtgctcctccacgtgcgcccc 152 |||||||||||||||||||| ||||| || |||||||||||||||||||||||||| ||| Sbjct: 131422 tgggccgtgcagaactacctccgccccggggacgccgtcgtgctcctccacgtgcggccc 131363 Query: 153 acctccgtgctctacggcgccgactggggctccatccccgtctccgtc 200 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131362 acctccgtgctctacggcgccgactggggctccatccccgtctccgtc 131315
>dbj|AK072280.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018C18, full insert sequence Length = 1337 Score = 276 bits (139), Expect = 7e-71 Identities = 181/195 (92%) Strand = Plus / Plus Query: 260 gaagaagcgggaggaggacttcgacgccttcacctccaccaagtcgcaggacctggcgca 319 ||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||| Sbjct: 643 gaagaagcgggaggaggacttcgacgccttcacgtccaccaaggcggaggacctggcgca 702 Query: 320 gccgctcgtcgccgcgcagatccccttcaagatccacatcgtcaaggaccacgacatgaa 379 |||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 703 gccgctggtcgacgcgcagatcccctttaagatccacgtcgtcaaggaccacgacatgaa 762 Query: 380 ggagcgcctctgcctcgaggccgagcgcctcggcctctccgccatgatcatgggcagccg 439 ||||||||||||||||||||||||||| || ||| | ||||| ||||||||||| ||||| Sbjct: 763 ggagcgcctctgcctcgaggccgagcgacttggcttgtccgctatgatcatgggaagccg 822 Query: 440 cggcttcggcgcctc 454 ||||||||| ||||| Sbjct: 823 cggcttcggtgcctc 837 Score = 262 bits (132), Expect = 1e-66 Identities = 159/168 (94%) Strand = Plus / Plus Query: 33 ccgcaccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtcaag 92 |||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| | Sbjct: 422 ccgcaccggcgcatcgccatcgccgtcgacctctccgacgagtccgcgtacgccgtccgg 481 Query: 93 tgggccgtgcagaactacctgcgcccgggcgacgccgtcgtgctcctccacgtgcgcccc 152 |||||||||||||||||||| ||||| || |||||||||||||||||||||||||| ||| Sbjct: 482 tgggccgtgcagaactacctccgccccggggacgccgtcgtgctcctccacgtgcggccc 541 Query: 153 acctccgtgctctacggcgccgactggggctccatccccgtctccgtc 200 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 542 acctccgtgctctacggcgccgactggggctccatccccgtctccgtc 589
>gb|AY104155.1| Zea mays PCO077380 mRNA sequence Length = 1011 Score = 236 bits (119), Expect = 6e-59 Identities = 167/183 (91%) Strand = Plus / Plus Query: 260 gaagaagcgggaggaggacttcgacgccttcacctccaccaagtcgcaggacctggcgca 319 |||||||||||||||||| | ||||||||||||||| |||||| |||||||||| ||||| Sbjct: 158 gaagaagcgggaggaggaatacgacgccttcacctctaccaaggcgcaggacctcgcgca 217 Query: 320 gccgctcgtcgccgcgcagatccccttcaagatccacatcgtcaaggaccacgacatgaa 379 |||||| |||| || |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 218 gccgcttgtcgatgcccagatccccttcaagatccatgtcgtcaaggaccacgacatgaa 277 Query: 380 ggagcgcctctgcctcgaggccgagcgcctcggcctctccgccatgatcatgggcagccg 439 ||||||||||||||||||||| |||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 278 ggagcgcctctgcctcgaggctgagcgccttggcctgtccgctatgatcatggggagccg 337 Query: 440 cgg 442 ||| Sbjct: 338 cgg 340 Score = 119 bits (60), Expect = 9e-24 Identities = 72/76 (94%) Strand = Plus / Plus Query: 126 gccgtcgtgctcctccacgtgcgccccacctccgtgctctacggcgccgactggggctcc 185 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 12 gccgtcgtgctgctccacgtgcgccccacctccgttctctacggcgccgactggggttcc 71 Query: 186 atccccgtctccgtcg 201 ||||| |||||||||| Sbjct: 72 atcccggtctccgtcg 87
>gb|AY371488.1| Zea mays clone BAC 276N12-123C01, partial sequence Length = 213888 Score = 224 bits (113), Expect = 2e-55 Identities = 155/169 (91%) Strand = Plus / Minus Query: 33 ccgcaccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtcaag 92 |||||||| |||||||||||||||| || ||| |||||||||||||||||| |||||| Sbjct: 4869 ccgcaccgtcgcatcgccatcgccgctgatctcaacgacgagtccgccttcgcagtcaag 4810 Query: 93 tgggccgtgcagaactacctgcgcccgggcgacgccgtcgtgctcctccacgtgcgcccc 152 |||||||||||||||||||| ||||| || |||||||||||||| ||||| ||||||||| Sbjct: 4809 tgggccgtgcagaactacctccgccccggggacgccgtcgtgctgctccatgtgcgcccc 4750 Query: 153 acctccgtgctctacggcgccgactggggctccatccccgtctccgtcg 201 |||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 4749 acctccgtcctctacggcgccgactggggctccatcccggtctccgtcg 4701 Score = 224 bits (113), Expect = 2e-55 Identities = 177/197 (89%), Gaps = 1/197 (0%) Strand = Plus / Minus Query: 261 aagaagcgggaggaggacttcgacgccttcacctccaccaagtcgcaggacctggcgcag 320 |||||| |||||||||||| |||||||||||||||||||||| |||||||||| ||||| Sbjct: 4632 aagaagtgggaggaggactacgacgccttcacctccaccaaggcgcaggacctcgcgcaa 4573 Query: 321 ccgctcgtcgccgcgcagatccccttcaagatccacatcgtcaaggaccacgacatgaag 380 ||||| ||| ||| |||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 4572 ccgctgatcgacgcccagatccccttcaagatccatgtcgtcaaggaccacgagatgaag 4513 Query: 381 gagcgcctctgcctcgaggccgagcgcctcggcctctccgccatgatcatgggcagccgc 440 ||||||| |||||||||||| |||||||| ||||| |||| |||||||||||| |||||| Sbjct: 4512 gagcgcccctgcctcgaggctgagcgccttggcct-tccgtcatgatcatggggagccgc 4454 Query: 441 ggcttcggcgcctcccg 457 || ||||| |||||||| Sbjct: 4453 ggtttcggggcctcccg 4437
>gb|BT016476.1| Zea mays clone Contig309 mRNA sequence Length = 1258 Score = 172 bits (87), Expect = 7e-40 Identities = 132/147 (89%) Strand = Plus / Minus Query: 36 caccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtcaagtgg 95 |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 981 caccgccgcatcgccatcgccgtcgacctctccgacgagtccgcctacgccgtgcgctgg 922 Query: 96 gccgtgcagaactacctgcgcccgggcgacgccgtcgtgctcctccacgtgcgccccacc 155 ||||| |||||||| ||||| || ||||||||| | || |||||||||||||||||| Sbjct: 921 gccgtcgccaactacctccgccccggggacgccgtcatcctgctccacgtgcgccccacc 862 Query: 156 tccgtgctctacggcgccgactggggc 182 ||||||||||||||||||||||||||| Sbjct: 861 tccgtgctctacggcgccgactggggc 835 Score = 127 bits (64), Expect = 4e-26 Identities = 142/167 (85%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 339 atccccttcaagatccacatcgtcaaggaccacgacatgaaggagcgcctctgcctcgag 398 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 672 atcccctacaagatccacatcgtcagggaccacgacatgaaggagcgcctctgcctcgag 613 Query: 399 gccgagcgcctcggcctctccgccatgatcatgggcagccgcggcttcggcgcctcccgc 458 | |||||||||| ||| |||| | |||||||| ||| |||||||||||| | || Sbjct: 612 gtcgagcgcctctcgctcagcgccgtcatcatggggagcaagggcttcggcgccgcgcgg 553 Query: 459 agg--ctggcacggcaggctcgggagtgtcagcgactactgcgtgca 503 ||| | | | ||||||||||| || |||||||||||||||||||| Sbjct: 552 aggaccagcaagggcaggctcggcagcgtcagcgactactgcgtgca 506
>ref|XM_478654.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1330 Score = 151 bits (76), Expect = 3e-33 Identities = 133/152 (87%) Strand = Plus / Plus Query: 34 cgcaccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtcaagt 93 ||||||||||||||||||||||||| |||||||||||||||||||| | ||||||| | Sbjct: 219 cgcaccgccgcatcgccatcgccgttgacctctccgacgagtccgcgtacgccgtccgct 278 Query: 94 gggccgtgcagaactacctgcgcccgggcgacgccgtcgtgctcctccacgtgcgcccca 153 ||||||| |||||||| ||||| || |||||||| | || || ||||| ||||||| Sbjct: 279 gggccgtcgccaactacctccgccccggggacgccgttatactgctgcacgtccgcccca 338 Query: 154 cctccgtgctctacggcgccgactggggctcc 185 |||||||||||||||||||||||||||||||| Sbjct: 339 cctccgtgctctacggcgccgactggggctcc 370 Score = 93.7 bits (47), Expect = 5e-16 Identities = 110/131 (83%) Strand = Plus / Plus Query: 269 ggaggaggacttcgacgccttcacctccaccaagtcgcaggacctggcgcagccgctcgt 328 |||||| |||||||||||||||||| | ||||| | | |||||||| |||||||| Sbjct: 460 ggaggacgacttcgacgccttcaccgcgtccaaggccgacgacctggccaagccgctcaa 519 Query: 329 cgccgcgcagatccccttcaagatccacatcgtcaaggaccacgacatgaaggagcgcct 388 | ||| |||||||| ||||||||||||||||||||| ||||||||||||||| | || Sbjct: 520 ggacgccgggatcccctacaagatccacatcgtcaaggatcacgacatgaaggagaggct 579 Query: 389 ctgcctcgagg 399 ||||||||||| Sbjct: 580 ctgcctcgagg 590
>ref|XM_478653.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1352 Score = 151 bits (76), Expect = 3e-33 Identities = 133/152 (87%) Strand = Plus / Plus Query: 34 cgcaccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtcaagt 93 ||||||||||||||||||||||||| |||||||||||||||||||| | ||||||| | Sbjct: 264 cgcaccgccgcatcgccatcgccgttgacctctccgacgagtccgcgtacgccgtccgct 323 Query: 94 gggccgtgcagaactacctgcgcccgggcgacgccgtcgtgctcctccacgtgcgcccca 153 ||||||| |||||||| ||||| || |||||||| | || || ||||| ||||||| Sbjct: 324 gggccgtcgccaactacctccgccccggggacgccgttatactgctgcacgtccgcccca 383 Query: 154 cctccgtgctctacggcgccgactggggctcc 185 |||||||||||||||||||||||||||||||| Sbjct: 384 cctccgtgctctacggcgccgactggggctcc 415 Score = 93.7 bits (47), Expect = 5e-16 Identities = 110/131 (83%) Strand = Plus / Plus Query: 269 ggaggaggacttcgacgccttcacctccaccaagtcgcaggacctggcgcagccgctcgt 328 |||||| |||||||||||||||||| | ||||| | | |||||||| |||||||| Sbjct: 505 ggaggacgacttcgacgccttcaccgcgtccaaggccgacgacctggccaagccgctcaa 564 Query: 329 cgccgcgcagatccccttcaagatccacatcgtcaaggaccacgacatgaaggagcgcct 388 | ||| |||||||| ||||||||||||||||||||| ||||||||||||||| | || Sbjct: 565 ggacgccgggatcccctacaagatccacatcgtcaaggatcacgacatgaaggagaggct 624 Query: 389 ctgcctcgagg 399 ||||||||||| Sbjct: 625 ctgcctcgagg 635
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 151 bits (76), Expect = 3e-33 Identities = 133/152 (87%) Strand = Plus / Minus Query: 34 cgcaccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtcaagt 93 ||||||||||||||||||||||||| |||||||||||||||||||| | ||||||| | Sbjct: 21844769 cgcaccgccgcatcgccatcgccgttgacctctccgacgagtccgcgtacgccgtccgct 21844710 Query: 94 gggccgtgcagaactacctgcgcccgggcgacgccgtcgtgctcctccacgtgcgcccca 153 ||||||| |||||||| ||||| || |||||||| | || || ||||| ||||||| Sbjct: 21844709 gggccgtcgccaactacctccgccccggggacgccgttatactgctgcacgtccgcccca 21844650 Query: 154 cctccgtgctctacggcgccgactggggctcc 185 |||||||||||||||||||||||||||||||| Sbjct: 21844649 cctccgtgctctacggcgccgactggggctcc 21844618 Score = 93.7 bits (47), Expect = 5e-16 Identities = 110/131 (83%) Strand = Plus / Minus Query: 269 ggaggaggacttcgacgccttcacctccaccaagtcgcaggacctggcgcagccgctcgt 328 |||||| |||||||||||||||||| | ||||| | | |||||||| |||||||| Sbjct: 21844528 ggaggacgacttcgacgccttcaccgcgtccaaggccgacgacctggccaagccgctcaa 21844469 Query: 329 cgccgcgcagatccccttcaagatccacatcgtcaaggaccacgacatgaaggagcgcct 388 | ||| |||||||| ||||||||||||||||||||| ||||||||||||||| | || Sbjct: 21844468 ggacgccgggatcccctacaagatccacatcgtcaaggatcacgacatgaaggagaggct 21844409 Query: 389 ctgcctcgagg 399 ||||||||||| Sbjct: 21844408 ctgcctcgagg 21844398 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 ctgcgcccgggcgacgccgtc 131 ||||||||||||||||||||| Sbjct: 19350123 ctgcgcccgggcgacgccgtc 19350143
>dbj|AK109507.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-E04, full insert sequence Length = 1351 Score = 151 bits (76), Expect = 3e-33 Identities = 133/152 (87%) Strand = Plus / Plus Query: 34 cgcaccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtcaagt 93 ||||||||||||||||||||||||| |||||||||||||||||||| | ||||||| | Sbjct: 264 cgcaccgccgcatcgccatcgccgttgacctctccgacgagtccgcgtacgccgtccgct 323 Query: 94 gggccgtgcagaactacctgcgcccgggcgacgccgtcgtgctcctccacgtgcgcccca 153 ||||||| |||||||| ||||| || |||||||| | || || ||||| ||||||| Sbjct: 324 gggccgtcgccaactacctccgccccggggacgccgttatactgctgcacgtccgcccca 383 Query: 154 cctccgtgctctacggcgccgactggggctcc 185 |||||||||||||||||||||||||||||||| Sbjct: 384 cctccgtgctctacggcgccgactggggctcc 415 Score = 93.7 bits (47), Expect = 5e-16 Identities = 110/131 (83%) Strand = Plus / Plus Query: 269 ggaggaggacttcgacgccttcacctccaccaagtcgcaggacctggcgcagccgctcgt 328 |||||| |||||||||||||||||| | ||||| | | |||||||| |||||||| Sbjct: 505 ggaggacgacttcgacgccttcaccgcgtccaaggccgacgacctggccaagccgctcaa 564 Query: 329 cgccgcgcagatccccttcaagatccacatcgtcaaggaccacgacatgaaggagcgcct 388 | ||| |||||||| ||||||||||||||||||||| ||||||||||||||| | || Sbjct: 565 ggacgccgggatcccctacaagatccacatcgtcaaggatcacgacatgaaggagaggct 624 Query: 389 ctgcctcgagg 399 ||||||||||| Sbjct: 625 ctgcctcgagg 635
>dbj|AK060720.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-F04, full insert sequence Length = 1330 Score = 151 bits (76), Expect = 3e-33 Identities = 133/152 (87%) Strand = Plus / Plus Query: 34 cgcaccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtcaagt 93 ||||||||||||||||||||||||| |||||||||||||||||||| | ||||||| | Sbjct: 219 cgcaccgccgcatcgccatcgccgttgacctctccgacgagtccgcgtacgccgtccgct 278 Query: 94 gggccgtgcagaactacctgcgcccgggcgacgccgtcgtgctcctccacgtgcgcccca 153 ||||||| |||||||| ||||| || |||||||| | || || ||||| ||||||| Sbjct: 279 gggccgtcgccaactacctccgccccggggacgccgttatactgctgcacgtccgcccca 338 Query: 154 cctccgtgctctacggcgccgactggggctcc 185 |||||||||||||||||||||||||||||||| Sbjct: 339 cctccgtgctctacggcgccgactggggctcc 370 Score = 93.7 bits (47), Expect = 5e-16 Identities = 110/131 (83%) Strand = Plus / Plus Query: 269 ggaggaggacttcgacgccttcacctccaccaagtcgcaggacctggcgcagccgctcgt 328 |||||| |||||||||||||||||| | ||||| | | |||||||| |||||||| Sbjct: 460 ggaggacgacttcgacgccttcaccgcgtccaaggccgacgacctggccaagccgctcaa 519 Query: 329 cgccgcgcagatccccttcaagatccacatcgtcaaggaccacgacatgaaggagcgcct 388 | ||| |||||||| ||||||||||||||||||||| ||||||||||||||| | || Sbjct: 520 ggacgccgggatcccctacaagatccacatcgtcaaggatcacgacatgaaggagaggct 579 Query: 389 ctgcctcgagg 399 ||||||||||| Sbjct: 580 ctgcctcgagg 590
>dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0041B22 Length = 142446 Score = 151 bits (76), Expect = 3e-33 Identities = 133/152 (87%) Strand = Plus / Minus Query: 34 cgcaccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtcaagt 93 ||||||||||||||||||||||||| |||||||||||||||||||| | ||||||| | Sbjct: 58445 cgcaccgccgcatcgccatcgccgttgacctctccgacgagtccgcgtacgccgtccgct 58386 Query: 94 gggccgtgcagaactacctgcgcccgggcgacgccgtcgtgctcctccacgtgcgcccca 153 ||||||| |||||||| ||||| || |||||||| | || || ||||| ||||||| Sbjct: 58385 gggccgtcgccaactacctccgccccggggacgccgttatactgctgcacgtccgcccca 58326 Query: 154 cctccgtgctctacggcgccgactggggctcc 185 |||||||||||||||||||||||||||||||| Sbjct: 58325 cctccgtgctctacggcgccgactggggctcc 58294 Score = 93.7 bits (47), Expect = 5e-16 Identities = 110/131 (83%) Strand = Plus / Minus Query: 269 ggaggaggacttcgacgccttcacctccaccaagtcgcaggacctggcgcagccgctcgt 328 |||||| |||||||||||||||||| | ||||| | | |||||||| |||||||| Sbjct: 58204 ggaggacgacttcgacgccttcaccgcgtccaaggccgacgacctggccaagccgctcaa 58145 Query: 329 cgccgcgcagatccccttcaagatccacatcgtcaaggaccacgacatgaaggagcgcct 388 | ||| |||||||| ||||||||||||||||||||| ||||||||||||||| | || Sbjct: 58144 ggacgccgggatcccctacaagatccacatcgtcaaggatcacgacatgaaggagaggct 58085 Query: 389 ctgcctcgagg 399 ||||||||||| Sbjct: 58084 ctgcctcgagg 58074
>gb|AY104756.1| Zea mays PCO067622 mRNA sequence Length = 637 Score = 119 bits (60), Expect = 9e-24 Identities = 69/72 (95%) Strand = Plus / Plus Query: 339 atccccttcaagatccacatcgtcaaggaccacgacatgaaggagcgcctctgcctcgag 398 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 85 atcccctacaagatccacatcgtcagggaccacgacatgaaggagcgcctctgcctcgag 144 Query: 399 gccgagcgcctc 410 | |||||||||| Sbjct: 145 gtcgagcgcctc 156
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 260 gaagaagcgggaggaggacttcgacgccttcacct 294 ||||||||||||||||||||| ||||||||||||| Sbjct: 8182794 gaagaagcgggaggaggactttgacgccttcacct 8182760 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 260 gaagaagcgggaggaggacttcgacgccttcacctccaccaagtcgcaggacc 312 ||||| |||| | ||||||||||| ||||||||||||| |||| ||||||||| Sbjct: 8182982 gaagaggcggcatgaggacttcgatgccttcacctccagcaaggcgcaggacc 8182930 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 179 gggctccatccccgtctccgtcgacga 205 |||||||||||| |||||||||||||| Sbjct: 8182897 gggctccatccctgtctccgtcgacga 8182871
>dbj|AP005603.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1047A05 Length = 157517 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 260 gaagaagcgggaggaggacttcgacgccttcacct 294 ||||||||||||||||||||| ||||||||||||| Sbjct: 151105 gaagaagcgggaggaggactttgacgccttcacct 151071 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 260 gaagaagcgggaggaggacttcgacgccttcacctccaccaagtcgcaggacc 312 ||||| |||| | ||||||||||| ||||||||||||| |||| ||||||||| Sbjct: 151293 gaagaggcggcatgaggacttcgatgccttcacctccagcaaggcgcaggacc 151241 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 179 gggctccatccccgtctccgtcgacga 205 |||||||||||| |||||||||||||| Sbjct: 151208 gggctccatccctgtctccgtcgacga 151182
>dbj|AP004648.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1449_H02 Length = 117860 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 260 gaagaagcgggaggaggacttcgacgccttcacct 294 ||||||||||||||||||||| ||||||||||||| Sbjct: 15476 gaagaagcgggaggaggactttgacgccttcacct 15442 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 260 gaagaagcgggaggaggacttcgacgccttcacctccaccaagtcgcaggacc 312 ||||| |||| | ||||||||||| ||||||||||||| |||| ||||||||| Sbjct: 15664 gaagaggcggcatgaggacttcgatgccttcacctccagcaaggcgcaggacc 15612 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 179 gggctccatccccgtctccgtcgacga 205 |||||||||||| |||||||||||||| Sbjct: 15579 gggctccatccctgtctccgtcgacga 15553
>ref|XM_480848.1| Oryza sativa (japonica cultivar-group), mRNA Length = 492 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 260 gaagaagcgggaggaggacttcgacgccttcacctccaccaagtcgcaggacc 312 ||||| |||| | ||||||||||| ||||||||||||| |||| ||||||||| Sbjct: 281 gaagaggcggcatgaggacttcgatgccttcacctccagcaaggcgcaggacc 333 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 179 gggctccatccccgtctccgtcgacga 205 |||||||||||| |||||||||||||| Sbjct: 366 gggctccatccctgtctccgtcgacga 392 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 260 gaagaagcgggaggaggactt 280 ||||||||||||||||||||| Sbjct: 469 gaagaagcgggaggaggactt 489
>ref|NM_179307.1| Arabidopsis thaliana unknown protein AT1G11360 transcript variant AT1G11360.2 mRNA, complete cds Length = 1159 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Plus Query: 348 aagatccacatcgtcaaggaccacgacatgaaggag 383 |||||||| ||||||||||| ||||| ||||||||| Sbjct: 545 aagatccatatcgtcaaggatcacgatatgaaggag 580
>ref|NM_101009.2| Arabidopsis thaliana unknown protein AT1G11360 transcript variant AT1G11360.1 mRNA, complete cds Length = 1226 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Plus Query: 348 aagatccacatcgtcaaggaccacgacatgaaggag 383 |||||||| ||||||||||| ||||| ||||||||| Sbjct: 545 aagatccatatcgtcaaggatcacgatatgaaggag 580
>gb|AY091783.1| Arabidopsis thaliana At1g11350/T23J18_2 mRNA sequence Length = 4925 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Plus Query: 348 aagatccacatcgtcaaggaccacgacatgaaggag 383 |||||||| ||||||||||| ||||| ||||||||| Sbjct: 439 aagatccatatcgtcaaggatcacgatatgaaggag 474
>gb|AY050416.1| Arabidopsis thaliana At1g11360/T23J18_35 mRNA, complete cds Length = 1018 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Plus Query: 348 aagatccacatcgtcaaggaccacgacatgaaggag 383 |||||||| ||||||||||| ||||| ||||||||| Sbjct: 421 aagatccatatcgtcaaggatcacgatatgaaggag 456
>emb|BX817082.1|CNS0ADAN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH84ZG01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1340 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Plus Query: 348 aagatccacatcgtcaaggaccacgacatgaaggag 383 |||||||| ||||||||||| ||||| ||||||||| Sbjct: 423 aagatccatatcgtcaaggatcacgatatgaaggag 458
>emb|BX817449.1|CNS0ACMU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL23ZE08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1060 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Plus Query: 348 aagatccacatcgtcaaggaccacgacatgaaggag 383 |||||||| ||||||||||| ||||| ||||||||| Sbjct: 422 aagatccatatcgtcaaggatcacgatatgaaggag 457
>emb|BX816453.1|CNS0AD1V Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH49ZH07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1401 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Plus Query: 348 aagatccacatcgtcaaggaccacgacatgaaggag 383 |||||||| ||||||||||| ||||| ||||||||| Sbjct: 420 aagatccatatcgtcaaggatcacgatatgaaggag 455
>emb|BX816396.1|CNS0AD68 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH45ZE09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1033 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Plus Query: 348 aagatccacatcgtcaaggaccacgacatgaaggag 383 |||||||| ||||||||||| ||||| ||||||||| Sbjct: 422 aagatccatatcgtcaaggatcacgatatgaaggag 457
>gb|AC011661.5|AC011661 Genomic sequence for Arabidopsis thaliana BAC T23J18 from chromosome I, complete sequence Length = 84797 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Minus Query: 348 aagatccacatcgtcaaggaccacgacatgaaggag 383 |||||||| ||||||||||| ||||| ||||||||| Sbjct: 7093 aagatccatatcgtcaaggatcacgatatgaaggag 7058
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 393 ctcgaggccgagcgcctcggcct 415 ||||||||||||||||||||||| Sbjct: 1377632 ctcgaggccgagcgcctcggcct 1377654 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 315 gcgcagccgctcgtcgccgcgcaga 339 ||||||||||||||||||| ||||| Sbjct: 2846946 gcgcagccgctcgtcgccgagcaga 2846970
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 393 ctcgaggccgagcgcctcggcct 415 ||||||||||||||||||||||| Sbjct: 2602429 ctcgaggccgagcgcctcggcct 2602451 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 315 gcgcagccgctcgtcgccgcgcaga 339 ||||||||||||||||||| ||||| Sbjct: 4074440 gcgcagccgctcgtcgccgagcaga 4074464
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 393 ctcgaggccgagcgcctcggcct 415 ||||||||||||||||||||||| Sbjct: 1779723 ctcgaggccgagcgcctcggcct 1779701 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 315 gcgcagccgctcgtcgccgcgcaga 339 ||||||||||||||||||| ||||| Sbjct: 3781021 gcgcagccgctcgtcgccgagcaga 3781045
>ref|XM_365601.1| Magnaporthe grisea 70-15 hypothetical protein (MG02303.4) partial mRNA Length = 711 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 ctccctggcggcctcctcgtcg 32 |||||||||||||||||||||| Sbjct: 627 ctccctggcggcctcctcgtcg 606
>ref|XM_465099.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1822 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 ccgtcgacgaggagggcgccg 216 ||||||||||||||||||||| Sbjct: 354 ccgtcgacgaggagggcgccg 374
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 315 gcgcagccgctcgtcgccgcgcaga 339 ||||||||||||||||||| ||||| Sbjct: 348672 gcgcagccgctcgtcgccgagcaga 348648
>ref|XM_478337.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1390 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 ctgcgcccgggcgacgccgtc 131 ||||||||||||||||||||| Sbjct: 150 ctgcgcccgggcgacgccgtc 170
>gb|AC133450.6| Oryza sativa chromosome 3 BAC OSJNBa0072F13 genomic sequence, complete sequence Length = 150743 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 182 ctccatccccgtctccgtcgacgaggagg 210 ||||||| ||||||||| ||||||||||| Sbjct: 140216 ctccatctccgtctccgacgacgaggagg 140244
>gb|AC120888.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0485F09, complete sequence Length = 161276 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 245 ggaggacgacgcgcggaagaagcgggaggagga 277 ||||||||||||| |||||||| ||||||||| Sbjct: 139377 ggaggacgacgcgaggaagaaggaggaggagga 139345
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 182 ctccatccccgtctccgtcgacgaggagg 210 ||||||| ||||||||| ||||||||||| Sbjct: 31540451 ctccatctccgtctccgacgacgaggagg 31540423
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 182 ctccatccccgtctccgtcgacgaggagg 210 ||||||| ||||||||| ||||||||||| Sbjct: 52155 ctccatctccgtctccgacgacgaggagg 52183
>gb|AC108870.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0682E05, complete sequence Length = 162223 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 245 ggaggacgacgcgcggaagaagcgggaggagga 277 ||||||||||||| |||||||| ||||||||| Sbjct: 22533 ggaggacgacgcgaggaagaaggaggaggagga 22501
>ref|XM_748187.1| Aspergillus fumigatus Af293 protein phosphatase 2C (Afu5g13740) partial mRNA Length = 951 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 331 ccgcgcagatccccttcaaga 351 ||||||||||||||||||||| Sbjct: 116 ccgcgcagatccccttcaaga 136
>emb|AL670729.19| Human DNA sequence from clone RP11-245P10 on chromosome 1 Contains the 3' end of the OBSCN gene for obscurin cytoskeletal calmodulin and titin-interacting RhoGEF protein, a novel protein, the TRIM11 gene for tripartite motif-containing 11 protein, the 5' end of a novel transcript, the 3' end of the TRIM17 gene for tripartite motif-containing 17 protein and three CpG islands, complete sequence Length = 62164 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ctcctccctggcggcctcctc 28 ||||||||||||||||||||| Sbjct: 24937 ctcctccctggcggcctcctc 24917
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 392 cctcgaggccgagcgcctcgg 412 ||||||||||||||||||||| Sbjct: 1019710 cctcgaggccgagcgcctcgg 1019690
>ref|XM_290923.4| PREDICTED: Homo sapiens KIAA1639 protein (KIAA1639), mRNA Length = 6075 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ctcctccctggcggcctcctc 28 ||||||||||||||||||||| Sbjct: 2823 ctcctccctggcggcctcctc 2803
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 245 ggaggacgacgcgcggaagaagcgggaggagga 277 ||||||||||||| |||||||| ||||||||| Sbjct: 25532486 ggaggacgacgcgaggaagaaggaggaggagga 25532454
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 182 ctccatccccgtctccgtcgacgaggagg 210 ||||||| ||||||||| ||||||||||| Sbjct: 31630957 ctccatctccgtctccgacgacgaggagg 31630929
>dbj|AB046859.2| Homo sapiens mRNA for KIAA1639 protein, partial cds Length = 7835 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ctcctccctggcggcctcctc 28 ||||||||||||||||||||| Sbjct: 4645 ctcctccctggcggcctcctc 4625
>dbj|AP005185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0409B11 Length = 168354 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 ctgcgcccgggcgacgccgtc 131 ||||||||||||||||||||| Sbjct: 39661 ctgcgcccgggcgacgccgtc 39681
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 309 gacctggcgcagccgctcgtcgccg 333 ||||||||||||| ||||||||||| Sbjct: 388583 gacctggcgcagcagctcgtcgccg 388559
>dbj|AK110955.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-A05, full insert sequence Length = 1390 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 ctgcgcccgggcgacgccgtc 131 ||||||||||||||||||||| Sbjct: 150 ctgcgcccgggcgacgccgtc 170
>ref|XM_306581.2| Anopheles gambiae str. PEST ENSANGP00000001049 (ENSANGG00000000917), partial mRNA Length = 2118 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 150 cccacctccgtgctctacggc 170 ||||||||||||||||||||| Sbjct: 415 cccacctccgtgctctacggc 435
>dbj|AK066972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089I06, full insert sequence Length = 1821 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 ccgtcgacgaggagggcgccg 216 ||||||||||||||||||||| Sbjct: 353 ccgtcgacgaggagggcgccg 373
>emb|AM231061.1| Homo sapiens partial mRNA for obscurin isoform B (OBSCN gene) Length = 5883 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ctcctccctggcggcctcctc 28 ||||||||||||||||||||| Sbjct: 2772 ctcctccctggcggcctcctc 2752
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 315 gcgcagccgctcgtcgccgcgcaga 339 ||||||||||||||||||| ||||| Sbjct: 3473832 gcgcagccgctcgtcgccgagcaga 3473856
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 311 cctggcgcagccgctcgtcgccgcg 335 |||||| |||||||||||||||||| Sbjct: 1248871 cctggcccagccgctcgtcgccgcg 1248847
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 245 ggaggacgacgcgcggaagaagcgggaggagga 277 ||||||||||||| |||||||| ||||||||| Sbjct: 25851156 ggaggacgacgcgaggaagaaggaggaggagga 25851124
>ref|XM_515192.1| PREDICTED: Pan troglodytes similar to bK268H5.1 (LOC458904), mRNA Length = 4170 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 440 cggcttcggcgcctcccgcaggct 463 |||| ||||||||||||||||||| Sbjct: 769 cggcctcggcgcctcccgcaggct 746
>gb|AC144741.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0086E02, complete sequence Length = 150474 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 33 ccgcaccgccgcatcgccatcgcc 56 |||||||||||| ||||||||||| Sbjct: 118172 ccgcaccgccgcctcgccatcgcc 118149
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 279 ttcgacgccttcacctccaccaag 302 ||||||||||||||||| |||||| Sbjct: 2657738 ttcgacgccttcacctcgaccaag 2657715 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 280 tcgacgccttcacctccaccaagt 303 ||||||||||||||| |||||||| Sbjct: 1139630 tcgacgccttcaccttcaccaagt 1139653 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 tggcgcagccgctcgtcgccgcgc 336 |||||||| ||||||||||||||| Sbjct: 125055 tggcgcaggcgctcgtcgccgcgc 125032
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 274 aggacttcgacgccttcacctccaccaa 301 ||||||||| |||| ||||||||||||| Sbjct: 3926003 aggacttcgtcgccctcacctccaccaa 3926030
>gb|AC129306.5| Mus musculus BAC clone RP24-178A16 from chromosome 16, complete sequence Length = 167601 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 465 gcacggcaggctcgggagtg 484 |||||||||||||||||||| Sbjct: 19916 gcacggcaggctcgggagtg 19897
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 391 gcctcgaggccgagcgcctcggcc 414 ||||||| |||||||||||||||| Sbjct: 654478 gcctcgacgccgagcgcctcggcc 654501
>ref|XM_422007.1| PREDICTED: Gallus gallus similar to LOC129881 protein (LOC424161), mRNA Length = 3873 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 gggccgtgcagaactacctg 113 |||||||||||||||||||| Sbjct: 2331 gggccgtgcagaactacctg 2312
>ref|XM_362623.1| Magnaporthe grisea 70-15 hypothetical protein (MG08206.4) partial mRNA Length = 1041 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 197 cgtcgacgaggagggcgccggaggcgcg 224 |||||||||||||| |||||| |||||| Sbjct: 897 cgtcgacgaggaggacgccggtggcgcg 924
>ref|XM_958618.1| Neurospora crassa OR74A hypothetical protein (NCU03059.1) partial mRNA Length = 1944 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cgtcgccgcaccgccgcatcgcca 51 |||||||||||||||||| ||||| Sbjct: 247 cgtcgccgcaccgccgcaccgcca 270
>ref|XM_330494.1| Neurospora crassa OR74A hypothetical protein (NCU03059.1) partial mRNA Length = 1944 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cgtcgccgcaccgccgcatcgcca 51 |||||||||||||||||| ||||| Sbjct: 247 cgtcgccgcaccgccgcaccgcca 270
>gb|DQ177443.1| Pseudomonas sp. 10c-1-3 poly beta hydroxyalkanoate operon, complete sequence Length = 6421 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 gaggccgagcgcctcggcct 415 |||||||||||||||||||| Sbjct: 4057 gaggccgagcgcctcggcct 4038
>gb|AC132310.3| Mus musculus BAC clone RP24-295G16 from chromosome 16, complete sequence Length = 136671 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 465 gcacggcaggctcgggagtg 484 |||||||||||||||||||| Sbjct: 60469 gcacggcaggctcgggagtg 60450
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 ctcgaggccgagcgcctcgg 412 |||||||||||||||||||| Sbjct: 447833 ctcgaggccgagcgcctcgg 447814
>gb|AY947889.1| Streptomyces hygroscopicus strain AM 3672 herbimycin polyketide biosynthetic gene cluster, complete sequence Length = 86941 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 cctcgtcgccgcaccgccgc 44 |||||||||||||||||||| Sbjct: 7574 cctcgtcgccgcaccgccgc 7555
>gb|AC007110.3| Homo sapiens chromosome 6, clone hRPK.472_J_18, complete sequence Length = 148336 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 470 gcaggctcgggagtgtcagcgactactgcgtg 501 |||||||| ||||||||||| ||| ||||||| Sbjct: 115317 gcaggctcaggagtgtcagctactgctgcgtg 115286
>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04, complete sequence Length = 136713 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 33 ccgcaccgccgcatcgccatcgcc 56 |||||||||||| ||||||||||| Sbjct: 16339 ccgcaccgccgcctcgccatcgcc 16316
>gb|AE011709.1| Xanthomonas axonopodis pv. citri str. 306, section 87 of 469 of the complete genome Length = 10667 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 gacccggaggacgacgcgcg 259 |||||||||||||||||||| Sbjct: 10054 gacccggaggacgacgcgcg 10073
>gb|AC092377.3| Homo sapiens chromosome 16 clone RP11-680G10, complete sequence Length = 207283 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 ggggctccatccccgtctcc 197 |||||||||||||||||||| Sbjct: 24112 ggggctccatccccgtctcc 24093
>gb|U80928.5|REU80928 Rhizobium etli strain CFN42 symbiotic plasmid p42d, complete sequence Length = 371254 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 cgcagccgctcgtcgccgcg 335 |||||||||||||||||||| Sbjct: 199568 cgcagccgctcgtcgccgcg 199549
>gb|AF189258.1|AF189258 Streptomyces venezuelae aminase (pabB) and amidotransferase (pabA) genes, complete cds; and transcriptional regulator gene, partial cds Length = 3814 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 189 cccgtctccgtcgacgaggagggc 212 |||||| ||||||||||||||||| Sbjct: 3191 cccgtccccgtcgacgaggagggc 3168
>dbj|AK147553.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1075E02 product:hypothetical Zn-finger, DHHC type/Zinc finger DHHC-type profile containing protein, full insert sequence Length = 5748 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 465 gcacggcaggctcgggagtg 484 |||||||||||||||||||| Sbjct: 102 gcacggcaggctcgggagtg 83
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 cgaggccgagcgcctcggcc 414 |||||||||||||||||||| Sbjct: 2510811 cgaggccgagcgcctcggcc 2510830
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ctcctccctggcggcctcct 27 |||||||||||||||||||| Sbjct: 16261629 ctcctccctggcggcctcct 16261648 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ctcctccctggcggcctcct 27 |||||||||||||||||||| Sbjct: 15243867 ctcctccctggcggcctcct 15243886
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 gccgcaccgccgcatcgcca 51 |||||||||||||||||||| Sbjct: 1128386 gccgcaccgccgcatcgcca 1128367
>dbj|AP005067.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0487H05 Length = 176057 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ctcctccctggcggcctcct 27 |||||||||||||||||||| Sbjct: 96116 ctcctccctggcggcctcct 96135
>dbj|AP005608.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0008C07 Length = 146008 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ctcctccctggcggcctcct 27 |||||||||||||||||||| Sbjct: 127642 ctcctccctggcggcctcct 127661
>dbj|AP005696.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0063K04 Length = 158792 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ctcctccctggcggcctcct 27 |||||||||||||||||||| Sbjct: 54988 ctcctccctggcggcctcct 55007
>dbj|AK066130.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052M23, full insert sequence Length = 1294 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 33 ccgcaccgccgcatcgccatcgcc 56 |||||||||||| ||||||||||| Sbjct: 32 ccgcaccgccgcctcgccatcgcc 55
>gb|AY104482.1| Zea mays PCO083430 mRNA sequence Length = 800 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 agtcgcaggacctggcgcag 320 |||||||||||||||||||| Sbjct: 407 agtcgcaggacctggcgcag 426
>dbj|AB085816.2| Pseudomonas putida phbC, phbA, phbB, flp, orf5 genes, complete cds Length = 8991 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 gaggccgagcgcctcggcct 415 |||||||||||||||||||| Sbjct: 4059 gaggccgagcgcctcggcct 4040
>gb|BC052474.1| Mus musculus misshapen-like kinase 1 (zebrafish), mRNA (cDNA clone MGC:63403 IMAGE:6833893), complete cds Length = 4842 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 cgcggaagaagcgggaggag 275 |||||||||||||||||||| Sbjct: 979 cgcggaagaagcgggaggag 998
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 cgccgtcgtgctcctccacg 144 |||||||||||||||||||| Sbjct: 3498554 cgccgtcgtgctcctccacg 3498535
>gb|M86351.1|STMTRIACY Streptomyces sp. triacylglycerol acylhydrolase (lipA) and lipA transcriptional activator (lipR) genes, complete cds Length = 6117 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 acctggcgcagccgctcgtc 329 |||||||||||||||||||| Sbjct: 5858 acctggcgcagccgctcgtc 5839 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,748,106 Number of Sequences: 3902068 Number of extensions: 3748106 Number of successful extensions: 93904 Number of sequences better than 10.0: 93 Number of HSP's better than 10.0 without gapping: 95 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 90193 Number of HSP's gapped (non-prelim): 3703 length of query: 503 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 481 effective length of database: 17,147,199,772 effective search space: 8247803090332 effective search space used: 8247803090332 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
