Clone Information

BLAST Search Result

Clone Name	bast52a03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RS11_MAIZE (P25460) 40S ribosomal protein S11	218	2e-57
2	RS11_SOYBN (P17093) 40S ribosomal protein S11	218	4e-57
3	RS11_EUPES (Q9M5M1) 40S ribosomal protein S11	216	1e-56
4	RS11A_ARATH (P16181) 40S ribosomal protein S11-1	210	8e-55
5	RS11B_ARATH (O65569) 40S ribosomal protein S11-2	209	1e-54
6	RS11C_ARATH (P42733) 40S ribosomal protein S11-3	207	5e-54
7	RS11_DUNTE (P42756) 40S ribosomal protein S11	154	4e-38
8	RS11_XENLA (P41115) 40S ribosomal protein S11	137	6e-33
9	RS11_SCHPO (P79013) 40S ribosomal protein S11	137	8e-33
10	RS11_RAT (P62282) 40S ribosomal protein S11	135	2e-32
11	RS11_MOUSE (P62281) 40S ribosomal protein S11	135	2e-32
12	RS11_MACFA (P61270) 40S ribosomal protein S11	135	2e-32
13	RS11_HUMAN (P62280) 40S ribosomal protein S11	135	2e-32
14	RS11_YEAST (P26781) 40S ribosomal protein S11 (S18) (YS12) (RP41)	134	7e-32
15	RS11_ANOGA (P52812) 40S ribosomal protein S11	99	2e-21
16	RS17_METMA (Q8PV41) 30S ribosomal protein S17P	75	3e-14
17	RS17_METAC (Q8TRT8) 30S ribosomal protein S17P	75	3e-14
18	RS17_METBF (Q46GA4) 30S ribosomal protein S17P	75	4e-14
19	RS17_METHJ (Q2FT32) 30S ribosomal protein S17P	74	6e-14
20	RS17_METKA (Q8TW21) 30S ribosomal protein S17P	73	1e-13
21	RS17_HALSA (O24786) 30S ribosomal protein S17P (HHAS17)	69	3e-12
22	RS17_METST (Q2NFW6) 30S ribosomal protein S17P	67	1e-11
23	RS17_METTH (O26120) 30S ribosomal protein S17P	64	7e-11
24	RS17_PYRHO (O59426) 30S ribosomal protein S17P	64	9e-11
25	RS17_PYRAB (Q9V1U5) 30S ribosomal protein S17P	64	9e-11
26	RS17_PYRKO (Q5JDH9) 30S ribosomal protein S17P	64	9e-11
27	RS17_PICTO (Q6L1B8) 30S ribosomal protein S17P	64	1e-10
28	RS17_METMP (Q6LXE4) 30S ribosomal protein S17P	62	3e-10
29	RS17_METVA (P14042) 30S ribosomal protein S17P	62	4e-10
30	RS17_METJA (P54036) 30S ribosomal protein S17P	62	4e-10
31	RS17_HALMA (P12741) 30S ribosomal protein S17P (HmaS17) (HS14)	60	1e-09
32	RS17_PYRFU (Q8U008) 30S ribosomal protein S17P	59	3e-09
33	RS17_SULAC (Q4JB49) 30S ribosomal protein S17P	56	2e-08
34	RS17_AERPE (Q9YF81) 30S ribosomal protein S17P	55	3e-08
35	RS17_ARCFU (O28363) 30S ribosomal protein S17P	52	3e-07
36	RS17_SULTO (Q975I9) 30S ribosomal protein S17P	52	4e-07
37	RS17_SULSO (Q9UX98) 30S ribosomal protein S17P	51	8e-07
38	RS17_THEAC (Q9HIR8) 30S ribosomal protein S17P	50	1e-06
39	RS17_THEVO (Q97BW7) 30S ribosomal protein S17P	50	1e-06
40	RS17_PYRAE (Q8ZWL3) 30S ribosomal protein S17P	45	5e-05
41	RS17_NANEQ (Q74NJ4) 30S ribosomal protein S17P	41	8e-04
42	PROL_ARATH (P43299) PROLIFERA protein	30	1.1
43	RS17_COXBU (Q83ER7) 30S ribosomal protein S17	30	1.4
44	KR122_HUMAN (P59991) Keratin-associated protein 12-2 (Keratin-as...	29	2.4
45	RESE_BACSU (P35164) Sensor protein resE (EC 2.7.13.3)	28	5.3
46	S39A4_HUMAN (Q6P5W5) Zinc transporter ZIP4 precursor (Solute car...	28	5.3
47	GPT_SULSO (P96000) Putative UDP-N-acetylglucosamine--dolichyl-ph...	28	5.3
48	RAD50_THEAC (Q9HLR8) DNA double-strand break repair rad50 ATPase	28	6.9
49	RPOB_BIFLO (Q8G514) DNA-directed RNA polymerase beta chain (EC 2...	28	6.9
50	TRM10_EMENI (Q5B8X0) tRNA (guanine-N(1)-)-methyltransferase (EC ...	27	9.0
51	RS17_SYNAS (Q2LQB1) 30S ribosomal protein S17	27	9.0
52	RFNG_NOTVI (Q9YHB3) Beta-1,3-N-acetylglucosaminyltransferase rad...	27	9.0
53	ATL1H_ARATH (Q9C7I1) Putative RING-H2 finger protein ATL1H precu...	27	9.0
54	GATA8_ARATH (Q9M1U2) Putative GATA transcription factor 8	27	9.0
55	PRL_MOUSE (P06879) Prolactin precursor (PRL)	27	9.0
56	CCAR1_MOUSE (Q8CH18) Cell division cycle and apoptosis regulator...	27	9.0

>RS11_MAIZE (P25460) 40S ribosomal protein S11|
          Length = 159

 Score =  218 bits (556), Expect = 2e-57
 Identities = 102/111 (91%), Positives = 108/111 (97%)
 Frame = +3

Query: 60  MAEQTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCP 239
           MAEQTEK+FLKQPKVFLS+KK+ K K+PGK GNRFWKS+GLGFKTPREAIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60

Query: 240 FTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 392
           FTGTV+IRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH
Sbjct: 61  FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 111

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>RS11_SOYBN (P17093) 40S ribosomal protein S11|
          Length = 159

 Score =  218 bits (554), Expect = 4e-57
 Identities = 101/111 (90%), Positives = 106/111 (95%)
 Frame = +3

Query: 60  MAEQTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCP 239
           MAEQTEK+FLKQPKVFLSTKK  K KRPGK GNRFWKS+GLGFKTPREAIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSTKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60

Query: 240 FTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 392
           FTG V+IRGRI+AGTCHSAKMNRTIIVRRNYLHF+KKYQRYEKRHSNIPAH
Sbjct: 61  FTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAH 111

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>RS11_EUPES (Q9M5M1) 40S ribosomal protein S11|
          Length = 159

 Score =  216 bits (549), Expect = 1e-56
 Identities = 99/111 (89%), Positives = 107/111 (96%)
 Frame = +3

Query: 60  MAEQTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCP 239
           MAEQTEK+FLKQPKVFL++KK  K KRPGK GNRFWKS+GLGFKTPREAI+GTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLASKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIDGTYIDKKCP 60

Query: 240 FTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 392
           FTGTV+IRGRI+AGTCHSAKMNRTIIVRRNYLHF+KKYQRYEKRHSNIPAH
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAH 111

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>RS11A_ARATH (P16181) 40S ribosomal protein S11-1|
          Length = 160

 Score =  210 bits (534), Expect = 8e-55
 Identities = 96/111 (86%), Positives = 106/111 (95%)
 Frame = +3

Query: 60  MAEQTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCP 239
           MAEQTEK+FLKQPKVFLS+KK+ K KRPGK GNRFWK++GLGFKTPREAI+G Y+DKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYVDKKCP 60

Query: 240 FTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 392
           FTGTV+IRGRI+AGTCHSAKM RTIIVRR+YLHFVKKYQRYEKRHSNIPAH
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMQRTIIVRRDYLHFVKKYQRYEKRHSNIPAH 111

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>RS11B_ARATH (O65569) 40S ribosomal protein S11-2|
          Length = 159

 Score =  209 bits (532), Expect = 1e-54
 Identities = 96/111 (86%), Positives = 107/111 (96%)
 Frame = +3

Query: 60  MAEQTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCP 239
           MAEQTEK+FLKQPKVFLS+KK+ K KRPGK GNRFWK++GLGFKTPREAIEGTYID+KCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIEGTYIDQKCP 60

Query: 240 FTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 392
           FTGTV+IRGRI++GTCHSAKM RTIIVRR+YLHFVKKY+RYEKRHSNIPAH
Sbjct: 61  FTGTVSIRGRILSGTCHSAKMQRTIIVRRDYLHFVKKYRRYEKRHSNIPAH 111

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>RS11C_ARATH (P42733) 40S ribosomal protein S11-3|
          Length = 159

 Score =  207 bits (527), Expect = 5e-54
 Identities = 96/111 (86%), Positives = 104/111 (93%)
 Frame = +3

Query: 60  MAEQTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCP 239
           MAEQTEK+FLKQPKVFLS+K + K KRPGK GNRFWK++GLGFKTPREAI+G YID KCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKISGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYIDSKCP 60

Query: 240 FTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 392
           FTGTV+IRGRI+AGTCHSAKM RTIIVRRNYLHFVKKYQRYEKRHSNIPAH
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 111

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>RS11_DUNTE (P42756) 40S ribosomal protein S11|
          Length = 157

 Score =  154 bits (390), Expect = 4e-38
 Identities = 75/111 (67%), Positives = 90/111 (81%)
 Frame = +3

Query: 60  MAEQTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCP 239
           MAEQTEK+F KQ  V    K  +K K PGK+G+RF+K+VGL FKTP+EAI+G Y+DKKCP
Sbjct: 1   MAEQTEKAFQKQVGVTGCFKSKEK-KAPGKSGHRFFKNVGLNFKTPKEAIDGNYVDKKCP 59

Query: 240 FTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 392
           FTG V+IRGRI+ G   S+KM RTIIVRR+YLHF+ KY RYEKRH+NIPAH
Sbjct: 60  FTGNVSIRGRILTGVVKSSKMMRTIIVRRDYLHFIPKYARYEKRHTNIPAH 110

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>RS11_XENLA (P41115) 40S ribosomal protein S11|
          Length = 158

 Score =  137 bits (345), Expect = 6e-33
 Identities = 60/108 (55%), Positives = 84/108 (77%)
 Frame = +3

Query: 69  QTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCPFTG 248
           QTE+++ KQP +F + K+  + +   +   R+++SVGLGFKTPREAI+GTYIDKKCPFTG
Sbjct: 5   QTERAYQKQPTIFQNKKRVLEGETGKEKLPRYYRSVGLGFKTPREAIDGTYIDKKCPFTG 64

Query: 249 TVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 392
            V+IRGRI++G     KM RTI++RR+YLH+++KY R+EKRH N+  H
Sbjct: 65  NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVH 112

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>RS11_SCHPO (P79013) 40S ribosomal protein S11|
          Length = 152

 Score =  137 bits (344), Expect = 8e-33
 Identities = 65/108 (60%), Positives = 79/108 (73%)
 Frame = +3

Query: 69  QTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCPFTG 248
           Q+E++F KQP +F + KK         AG R++K VGLGFKTP EAI G Y+DKKCPF G
Sbjct: 8   QSERAFQKQPHIFQNAKKG--------AGRRWYKDVGLGFKTPAEAIYGEYVDKKCPFVG 59

Query: 249 TVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 392
            V+IRGRI+ GT  S KM+RTII+RR YLHF+ KY RYEKRH N+ AH
Sbjct: 60  QVSIRGRILTGTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNLAAH 107

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>RS11_RAT (P62282) 40S ribosomal protein S11|
          Length = 158

 Score =  135 bits (341), Expect = 2e-32
 Identities = 59/108 (54%), Positives = 83/108 (76%)
 Frame = +3

Query: 69  QTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCPFTG 248
           QTE+++ KQP +F + K+    +   +   R++K++GLGFKTP+EAIEGTYIDKKCPFTG
Sbjct: 5   QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64

Query: 249 TVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 392
            V+IRGRI++G     KM RTI++RR+YLH+++KY R+EKRH N+  H
Sbjct: 65  NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVH 112

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>RS11_MOUSE (P62281) 40S ribosomal protein S11|
          Length = 158

 Score =  135 bits (341), Expect = 2e-32
 Identities = 59/108 (54%), Positives = 83/108 (76%)
 Frame = +3

Query: 69  QTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCPFTG 248
           QTE+++ KQP +F + K+    +   +   R++K++GLGFKTP+EAIEGTYIDKKCPFTG
Sbjct: 5   QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64

Query: 249 TVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 392
            V+IRGRI++G     KM RTI++RR+YLH+++KY R+EKRH N+  H
Sbjct: 65  NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVH 112

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>RS11_MACFA (P61270) 40S ribosomal protein S11|
          Length = 158

 Score =  135 bits (341), Expect = 2e-32
 Identities = 59/108 (54%), Positives = 83/108 (76%)
 Frame = +3

Query: 69  QTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCPFTG 248
           QTE+++ KQP +F + K+    +   +   R++K++GLGFKTP+EAIEGTYIDKKCPFTG
Sbjct: 5   QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64

Query: 249 TVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 392
            V+IRGRI++G     KM RTI++RR+YLH+++KY R+EKRH N+  H
Sbjct: 65  NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVH 112

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>RS11_HUMAN (P62280) 40S ribosomal protein S11|
          Length = 158

 Score =  135 bits (341), Expect = 2e-32
 Identities = 59/108 (54%), Positives = 83/108 (76%)
 Frame = +3

Query: 69  QTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCPFTG 248
           QTE+++ KQP +F + K+    +   +   R++K++GLGFKTP+EAIEGTYIDKKCPFTG
Sbjct: 5   QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64

Query: 249 TVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 392
            V+IRGRI++G     KM RTI++RR+YLH+++KY R+EKRH N+  H
Sbjct: 65  NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVH 112

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>RS11_YEAST (P26781) 40S ribosomal protein S11 (S18) (YS12) (RP41)|
          Length = 155

 Score =  134 bits (336), Expect = 7e-32
 Identities = 61/108 (56%), Positives = 81/108 (75%)
 Frame = +3

Query: 69  QTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCPFTG 248
           Q+E++F KQP +F + K      +  K   R++K+ GLGFKTP+ AIEG+YIDKKCPFTG
Sbjct: 7   QSERAFQKQPHIFNNPKV-----KTSKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTG 61

Query: 249 TVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 392
            V+IRG+I+ GT  S KM+RTI++RR YLH++ KY RYEKRH N+P H
Sbjct: 62  LVSIRGKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVH 109

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>RS11_ANOGA (P52812) 40S ribosomal protein S11|
          Length = 151

 Score = 99.4 bits (246), Expect = 2e-21
 Identities = 51/109 (46%), Positives = 70/109 (64%)
 Frame = +3

Query: 66  EQTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCPFT 245
           +Q  ++F KQ  + L+ K   + K     G R   S+GLGFKTP+EAI GTYIDKKCPFT
Sbjct: 4   QQNIRAFQKQLGINLNRKNVSRKK-----GLRMHHSIGLGFKTPKEAITGTYIDKKCPFT 58

Query: 246 GTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 392
           G ++IRGRI+ G     K    + +RR+YL F++KY  +EKR+ N+  H
Sbjct: 59  GHISIRGRILTGVVR--KCIVLLYIRRDYLQFIRKYDTFEKRNRNMRLH 105

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>RS17_METMA (Q8PV41) 30S ribosomal protein S17P|
          Length = 109

 Score = 75.5 bits (184), Expect = 3e-14
 Identities = 34/75 (45%), Positives = 47/75 (62%)
 Frame = +3

Query: 168 KSVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVK 347
           + +GL    P E  +  Y    CPF GT+ +RG+I+ GT  S+KM+ T+++ R Y+  V 
Sbjct: 3   RDIGLNIPAPSEECDDAY----CPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYMKMVS 58

Query: 348 KYQRYEKRHSNIPAH 392
           KYQRYEKR S I AH
Sbjct: 59  KYQRYEKRRSKIHAH 73

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>RS17_METAC (Q8TRT8) 30S ribosomal protein S17P|
          Length = 109

 Score = 75.5 bits (184), Expect = 3e-14
 Identities = 34/75 (45%), Positives = 47/75 (62%)
 Frame = +3

Query: 168 KSVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVK 347
           + +GL    P E  +  Y    CPF GT+ +RG+I+ GT  S+KM+ T+++ R Y+  V 
Sbjct: 3   RDIGLNIPAPSEECDDAY----CPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYMKMVS 58

Query: 348 KYQRYEKRHSNIPAH 392
           KYQRYEKR S I AH
Sbjct: 59  KYQRYEKRRSKIHAH 73

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>RS17_METBF (Q46GA4) 30S ribosomal protein S17P|
          Length = 109

 Score = 75.1 bits (183), Expect = 4e-14
 Identities = 33/75 (44%), Positives = 48/75 (64%)
 Frame = +3

Query: 168 KSVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVK 347
           + +GL    P E    +Y    CPF GT+++RG+I+ GT  S+KM+ T+++ R Y+  V 
Sbjct: 3   RDIGLNIPAPSEECNDSY----CPFHGTLSVRGQILVGTVVSSKMDNTVVIERQYMKLVP 58

Query: 348 KYQRYEKRHSNIPAH 392
           KYQRYEKR S + AH
Sbjct: 59  KYQRYEKRRSKVHAH 73

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>RS17_METHJ (Q2FT32) 30S ribosomal protein S17P|
          Length = 108

 Score = 74.3 bits (181), Expect = 6e-14
 Identities = 35/75 (46%), Positives = 48/75 (64%)
 Frame = +3

Query: 168 KSVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVK 347
           + +GL    P +       D  CPF GT+ +RG++I G   S KM  +++V+R+YLHFV+
Sbjct: 3   RDIGLNVPVPEKDCS----DVNCPFHGTLPVRGQVITGKVVSDKMTGSVVVQRDYLHFVR 58

Query: 348 KYQRYEKRHSNIPAH 392
           KYQRYEKR S I AH
Sbjct: 59  KYQRYEKRSSKIHAH 73

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>RS17_METKA (Q8TW21) 30S ribosomal protein S17P|
          Length = 118

 Score = 73.2 bits (178), Expect = 1e-13
 Identities = 34/78 (43%), Positives = 48/78 (61%)
 Frame = +3

Query: 159 RFWKSVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLH 338
           R  K +GLG K PR   +    D  CPF G + +RG I+ G   S +M++T+IV R Y  
Sbjct: 6   RMAKDIGLGVKPPRRECD----DPNCPFHGNLRVRGMILEGVVVSDRMDKTVIVEREYYR 61

Query: 339 FVKKYQRYEKRHSNIPAH 392
           + +KY+R+E+R S IPAH
Sbjct: 62  YDRKYERWERRRSRIPAH 79

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>RS17_HALSA (O24786) 30S ribosomal protein S17P (HHAS17)|
          Length = 109

 Score = 68.9 bits (167), Expect = 3e-12
 Identities = 32/74 (43%), Positives = 45/74 (60%)
 Frame = +3

Query: 171 SVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKK 350
           ++GL    P    EGT  D+ CPF G +++RG+++ G   S  M +T++V R Y  FV K
Sbjct: 2   AIGLNVTEP----EGTCSDEDCPFHGNLSVRGQVLEGEVASTDMEKTVVVEREYDVFVPK 57

Query: 351 YQRYEKRHSNIPAH 392
           Y RY KR S +PAH
Sbjct: 58  YDRYMKRRSRVPAH 71

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>RS17_METST (Q2NFW6) 30S ribosomal protein S17P|
          Length = 106

 Score = 66.6 bits (161), Expect = 1e-11
 Identities = 31/73 (42%), Positives = 46/73 (63%)
 Frame = +3

Query: 174 VGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKY 353
           VG+  K P +       D  CPF G +++RG++I GT  S K +RTI V R++  ++ K+
Sbjct: 2   VGINVKQPEKECH----DPNCPFHGELSVRGQVIEGTVTSDKADRTITVERSFYKYINKF 57

Query: 354 QRYEKRHSNIPAH 392
           +RYEKR+S I AH
Sbjct: 58  ERYEKRNSKIKAH 70

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>RS17_METTH (O26120) 30S ribosomal protein S17P|
          Length = 106

 Score = 64.3 bits (155), Expect = 7e-11
 Identities = 28/56 (50%), Positives = 38/56 (67%)
 Frame = +3

Query: 225 DKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 392
           D  CPF G + +RG+I+ GT  S K  RT+ V R++  F++KY+RYEKR S I AH
Sbjct: 15  DPNCPFHGDLPLRGQILEGTVVSDKAERTVTVERSFYKFIRKYERYEKRKSKIKAH 70

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>RS17_PYRHO (O59426) 30S ribosomal protein S17P|
          Length = 116

 Score = 63.9 bits (154), Expect = 9e-11
 Identities = 31/75 (41%), Positives = 43/75 (57%)
 Frame = +3

Query: 168 KSVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVK 347
           + +GL  + P E  +    D KCP+ G + I GR+  G   S K  +T+ V R Y H++K
Sbjct: 6   RDIGLRIQPPAEKCD----DPKCPWHGHLKIHGRVFEGIVISDKPRKTVTVERQYYHYLK 61

Query: 348 KYQRYEKRHSNIPAH 392
           KY+RYE R S I AH
Sbjct: 62  KYERYELRRSRIHAH 76

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>RS17_PYRAB (Q9V1U5) 30S ribosomal protein S17P|
          Length = 116

 Score = 63.9 bits (154), Expect = 9e-11
 Identities = 31/75 (41%), Positives = 43/75 (57%)
 Frame = +3

Query: 168 KSVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVK 347
           + +GL  + P E  +    D KCP+ G + I GR+  G   S K  +T+ V R Y H++K
Sbjct: 6   RDIGLRIQPPAEKCD----DPKCPWHGHLKIHGRVFEGIVVSDKPRKTVTVERQYYHYLK 61

Query: 348 KYQRYEKRHSNIPAH 392
           KY+RYE R S I AH
Sbjct: 62  KYERYELRRSRIHAH 76

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>RS17_PYRKO (Q5JDH9) 30S ribosomal protein S17P|
          Length = 114

 Score = 63.9 bits (154), Expect = 9e-11
 Identities = 30/75 (40%), Positives = 43/75 (57%)
 Frame = +3

Query: 168 KSVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVK 347
           + +GL  + P E       D KCP+ G + I GR + G   S K  +T++V R Y H++K
Sbjct: 2   REIGLRVQPPAEVCN----DPKCPWHGNLKIHGRYVEGIVVSDKGKKTVVVERQYYHYLK 57

Query: 348 KYQRYEKRHSNIPAH 392
           KY+RYE R S + AH
Sbjct: 58  KYERYELRKSKVHAH 72

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>RS17_PICTO (Q6L1B8) 30S ribosomal protein S17P|
          Length = 106

 Score = 63.5 bits (153), Expect = 1e-10
 Identities = 32/75 (42%), Positives = 45/75 (60%)
 Frame = +3

Query: 168 KSVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVK 347
           +++G+  K P    E T  D KCPF G + I G+II GT  S KMN +I+++R     +K
Sbjct: 2   ENIGIDVKKP----ERTCNDPKCPFHGNLRIHGQIIVGTVVSTKMNGSIVLKRESRRLIK 57

Query: 348 KYQRYEKRHSNIPAH 392
           KY+RYE + S   AH
Sbjct: 58  KYERYETKISKFHAH 72

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>RS17_METMP (Q6LXE4) 30S ribosomal protein S17P|
          Length = 109

 Score = 62.0 bits (149), Expect = 3e-10
 Identities = 28/74 (37%), Positives = 45/74 (60%)
 Frame = +3

Query: 171 SVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKK 350
           ++G+  K P    E    D  CPF GT+++RG+I  G   S K + TI+++R    ++ K
Sbjct: 3   NIGIDVKAPENVCE----DPNCPFHGTLSVRGQIFEGIVTSDKGHDTIVIKREVTGYISK 58

Query: 351 YQRYEKRHSNIPAH 392
           Y+RYEKR +++ AH
Sbjct: 59  YERYEKRTTSLVAH 72

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>RS17_METVA (P14042) 30S ribosomal protein S17P|
          Length = 109

 Score = 61.6 bits (148), Expect = 4e-10
 Identities = 27/74 (36%), Positives = 44/74 (59%)
 Frame = +3

Query: 171 SVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKK 350
           ++G+  K P    E    D  CPF GT+++RG+I  G     K + TI+++R    ++ K
Sbjct: 3   NIGIDVKAPENVCE----DVNCPFHGTLSVRGQIFEGVVSGDKGHNTIVIKREVTGYISK 58

Query: 351 YQRYEKRHSNIPAH 392
           Y+RYEKR +++ AH
Sbjct: 59  YERYEKRTTSLVAH 72

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>RS17_METJA (P54036) 30S ribosomal protein S17P|
          Length = 117

 Score = 61.6 bits (148), Expect = 4e-10
 Identities = 26/75 (34%), Positives = 46/75 (61%)
 Frame = +3

Query: 168 KSVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVK 347
           +++G+  K P    +    DK CPF G + +RG+   G   S K ++T+I++R  + ++K
Sbjct: 4   RNIGIQVKAPEVECD----DKNCPFHGNLPVRGQSFVGVVVSDKPHKTVIIKREVVKYIK 59

Query: 348 KYQRYEKRHSNIPAH 392
           KY+RYE+R + + AH
Sbjct: 60  KYERYERRTTKLAAH 74

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>RS17_HALMA (P12741) 30S ribosomal protein S17P (HmaS17) (HS14)|
          Length = 111

 Score = 60.1 bits (144), Expect = 1e-09
 Identities = 29/74 (39%), Positives = 43/74 (58%)
 Frame = +3

Query: 171 SVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKK 350
           ++GL  + P E    T  D+ CPF G +++RG+ + G   S  M +T++V R Y   V K
Sbjct: 1   ALGLNVQEPEE----TCADQNCPFHGELSVRGQTLNGEVASTDMEKTVVVEREYDVKVPK 56

Query: 351 YQRYEKRHSNIPAH 392
           Y R+ KR S +PAH
Sbjct: 57  YDRFMKRRSRVPAH 70

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>RS17_PYRFU (Q8U008) 30S ribosomal protein S17P|
          Length = 113

 Score = 58.9 bits (141), Expect = 3e-09
 Identities = 29/75 (38%), Positives = 41/75 (54%)
 Frame = +3

Query: 168 KSVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVK 347
           + +GL  + P E  +    D KCP+ G + I GR+  G   S K  +T+ V R Y  ++ 
Sbjct: 3   RDIGLRVQPPAEKCD----DPKCPWHGNLKIHGRVFEGIVVSDKPRKTVTVERQYYFYLN 58

Query: 348 KYQRYEKRHSNIPAH 392
           KY+RYE R S I AH
Sbjct: 59  KYERYELRRSKIHAH 73

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>RS17_SULAC (Q4JB49) 30S ribosomal protein S17P|
          Length = 114

 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
 Frame = +3

Query: 144 GKAGNRFWKSVGL-GFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIV 320
           GK G +  K+VG+ G   P +  +  Y    CP+ G++ +RG ++ G    A+ NRT  V
Sbjct: 2   GKKG-QLVKNVGIEGVSAPSKTCDDEY----CPYHGSLKVRGIVLEGKLIRARANRTGTV 56

Query: 321 RRNYLHFVKKYQRYEKRHSNIPAH 392
            R Y+ +  KY+RYE+R S I  H
Sbjct: 57  EREYIFYDSKYKRYERRRSRIHVH 80

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>RS17_AERPE (Q9YF81) 30S ribosomal protein S17P|
          Length = 120

 Score = 55.5 bits (132), Expect = 3e-08
 Identities = 23/56 (41%), Positives = 35/56 (62%)
 Frame = +3

Query: 225 DKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 392
           D  CP+ GT+ +RG ++ G    A+  R ++V+  YL++ KKY RYE+R   I AH
Sbjct: 30  DPNCPWHGTLRVRGVLLEGVVAKARARRMVVVQHVYLYYDKKYNRYERRSKKIHAH 85

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>RS17_ARCFU (O28363) 30S ribosomal protein S17P|
          Length = 111

 Score = 52.0 bits (123), Expect = 3e-07
 Identities = 23/75 (30%), Positives = 42/75 (56%)
 Frame = +3

Query: 168 KSVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVK 347
           + +G+  K P    E    D+ CPF GT+++RG+++ G        +T ++ R  + +V 
Sbjct: 2   RDIGIDVKPPERECE----DENCPFHGTLSVRGQLLRGKVVKV-YGKTAVIERELIRYVP 56

Query: 348 KYQRYEKRHSNIPAH 392
           K++RY K+ S + AH
Sbjct: 57  KFERYMKKRSKLHAH 71

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>RS17_SULTO (Q975I9) 30S ribosomal protein S17P|
          Length = 116

 Score = 51.6 bits (122), Expect = 4e-07
 Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
 Frame = +3

Query: 168 KSVGL-GFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFV 344
           K++G+ G   P +  +    D  CPF G + +RG I+ G     +  +T +V R+YL + 
Sbjct: 12  KNIGIEGVNPPSKTCD----DINCPFHGNLRVRGIILEGRLIRYRAEKTGVVERDYLFYD 67

Query: 345 KKYQRYEKRHSNIPAH 392
            KY+RYE+R S I  H
Sbjct: 68  TKYKRYERRRSRIHVH 83

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>RS17_SULSO (Q9UX98) 30S ribosomal protein S17P|
          Length = 114

 Score = 50.8 bits (120), Expect = 8e-07
 Identities = 20/56 (35%), Positives = 34/56 (60%)
 Frame = +3

Query: 225 DKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 392
           D+ CP+ G++ +RG  + G     +  +  ++ R YL++  KY+RYE+R S I AH
Sbjct: 25  DEDCPYHGSLRVRGITLEGVIVKYRGTKAAVIERQYLYYDSKYKRYERRRSRIHAH 80

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>RS17_THEAC (Q9HIR8) 30S ribosomal protein S17P|
          Length = 109

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
 Frame = +3

Query: 162 FWKSVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHF 341
           + +++GL  K P    E    D  CP+ G +++RG+++ G   SA M ++ +V R Y  +
Sbjct: 2   YTRNIGLDVKLP----ESECNDPHCPYHGKLSVRGQVLTGKVVSANMTKSAVVAREYQQY 57

Query: 342 VKKYQR----YEKRHSNIP 386
           + KY+R     +K H ++P
Sbjct: 58  IPKYERKATKIKKYHVHVP 76

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>RS17_THEVO (Q97BW7) 30S ribosomal protein S17P|
          Length = 109

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
 Frame = +3

Query: 168 KSVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVK 347
           +++GL    P    E    D  CPF G + +RG+++ G   S  M R+++V R Y  ++ 
Sbjct: 4   RNIGLDVSVP----EKECTDPHCPFHGNLPVRGQVLTGKVISTAMTRSVVVAREYQQYIP 59

Query: 348 KYQR----YEKRHSNIP 386
           KY+R     +K H ++P
Sbjct: 60  KYERKATKIKKYHVHVP 76

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>RS17_PYRAE (Q8ZWL3) 30S ribosomal protein S17P|
          Length = 123

 Score = 44.7 bits (104), Expect = 5e-05
 Identities = 16/53 (30%), Positives = 32/53 (60%)
 Frame = +3

Query: 225 DKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNI 383
           D  CP+ G + +R +++  T    +M++  +V   +LH+++KY RYE+R   +
Sbjct: 20  DPLCPWHGHLKVRLKLLEVTVEKVRMHKAAVVIHEWLHYIRKYNRYERRRKRM 72

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>RS17_NANEQ (Q74NJ4) 30S ribosomal protein S17P|
          Length = 113

 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 19/56 (33%), Positives = 30/56 (53%)
 Frame = +3

Query: 225 DKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 392
           DKKCP  G + +RG    G       N+T+ +     +++ KY+RYE R + I A+
Sbjct: 16  DKKCPHHGHLKVRGFFFKGKVIKKSDNKTVKIEIIRYYWLPKYERYELRRTRITAY 71

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>PROL_ARATH (P43299) PROLIFERA protein|
          Length = 716

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = +3

Query: 192 TPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYE 365
           +P + +E + I    P+TG  A+R  ++A T   A          +  HF KKY+ YE
Sbjct: 260 SPGDVVEFSGIFLPIPYTGFKALRAGLVADTYLEAT---------SVTHFKKKYEEYE 308

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>RS17_COXBU (Q83ER7) 30S ribosomal protein S17|
          Length = 89

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +3

Query: 267 RIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 392
           R + GT  S KMN T++VR        KY ++ KR + I AH
Sbjct: 9   RSLMGTVVSNKMNDTVVVRVERRVKHPKYGKFIKRSTKIHAH 50

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>KR122_HUMAN (P59991) Keratin-associated protein 12-2 (Keratin-associated|
           protein 12.2) (High sulfur keratin-associated protein
           12.2)
          Length = 146

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 13/21 (61%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = -3

Query: 171 SSRSGCQP-CRASLPCQPSWC 112
           S  SGCQP C A  PCQP+ C
Sbjct: 5   SCSSGCQPACCAPSPCQPACC 25

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>RESE_BACSU (P35164) Sensor protein resE (EC 2.7.13.3)|
          Length = 589

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 20/66 (30%), Positives = 28/66 (42%)
 Frame = +3

Query: 96  PKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRII 275
           P +F    KADKA+  G+AG       GLG    +  +E           G++ +  RI 
Sbjct: 531 PFIFERFYKADKARTRGRAG------TGLGLAIVKNIVEA--------HNGSITVHSRID 576

Query: 276 AGTCHS 293
            GT  S
Sbjct: 577 KGTTFS 582

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>S39A4_HUMAN (Q6P5W5) Zinc transporter ZIP4 precursor (Solute carrier family 39|
           member 4)
          Length = 647

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
 Frame = -1

Query: 323 AHDDRPV-HLGAVAGSSYDSAPDGNSSSEWALLVNVGTFDRFPWGLETKANTLPEAVASL 147
           AH D    H GA +          NSSS W  +          +GL  +A   PEA A L
Sbjct: 237 AHSDHSHRHRGASSRDPVPLISSSNSSSVWDTVCLSARDVMAAYGLSEQAGVTPEAWAQL 296

Query: 146 AGPLCLVSLLGA 111
           +  L    L GA
Sbjct: 297 SPALLQQQLSGA 308

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>GPT_SULSO (P96000) Putative UDP-N-acetylglucosamine--dolichyl-phosphate|
           N-acetylglucosaminephosphotransferase (EC 2.7.8.15)
           (GPT) (G1PT) (N-acetylglucosamine-1-phosphate
           transferase) (GlcNAc-1-P transferase)
          Length = 322

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = -2

Query: 211 SIASLGVLKPRPTLFQKRLPALPGLFALSAFLVLRK 104
           ++A +G+    PT +Q  L AL  +F+LSAFL+  K
Sbjct: 174 ALAYIGLTHTGPT-YQAGLIALSAIFSLSAFLIFNK 208

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>RAD50_THEAC (Q9HLR8) DNA double-strand break repair rad50 ATPase|
          Length = 896

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +1

Query: 148 RLATASGRVLALVSRPQGKRSKVPTLTRSAHSLELLPSGAES*LE 282
           RL    G++ A +S   GKRSKV TL      +E   S  E  +E
Sbjct: 683 RLKYVEGQIQATLSSLSGKRSKVETLRSHVSEIEQRISDRERDIE 727

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>RPOB_BIFLO (Q8G514) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
            beta subunit) (Transcriptase beta chain) (RNA polymerase
            beta subunit)
          Length = 1187

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -1

Query: 305  VHLGAVAGSSYDSAPDGNSSSEWALLVNVG 216
            +HLG +A S +D + D N  +EW  L+  G
Sbjct: 935  LHLGWIAHSGWDISLDPNLEAEWKKLIPSG 964

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>TRM10_EMENI (Q5B8X0) tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.31) (tRNA|
           methyltransferase 10)
          Length = 415

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -1

Query: 323 AHDDRPVHLGAVAGSSYDSAPDGNSSSEWAL 231
           AH+  P+  GA+ GS  D++P   ++S+ A+
Sbjct: 18  AHESEPLITGAIKGSQDDTSPAEQTNSQKAI 48

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>RS17_SYNAS (Q2LQB1) 30S ribosomal protein S17|
          Length = 85

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +3

Query: 267 RIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 392
           R I G   S KM++TI++R   L     + +Y ++H     H
Sbjct: 8   RTIKGVVVSNKMDKTIVIRAERLVKHPVFHKYTRKHVKYMVH 49

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>RFNG_NOTVI (Q9YHB3) Beta-1,3-N-acetylglucosaminyltransferase radical fringe|
           (EC 2.4.1.222) (nrFng) (O-fucosylpeptide
           3-beta-N-acetylglucosaminyltransferase)
          Length = 396

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +3

Query: 48  HLVAMAEQTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVG 179
           HL+A    ++  +L +P +    +  ++ K  G A  RFW + G
Sbjct: 229 HLLASFSHSQDVYLGRPSLDHPIEAIERVKSDGSASVRFWFATG 272

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>ATL1H_ARATH (Q9C7I1) Putative RING-H2 finger protein ATL1H precursor|
          Length = 327

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = -3

Query: 171 SSRSGCQPCRASLPCQP 121
           SSRS C  CRASLP +P
Sbjct: 161 SSRSTCPVCRASLPPKP 177

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>GATA8_ARATH (Q9M1U2) Putative GATA transcription factor 8|
          Length = 204

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
 Frame = +3

Query: 108 LSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTY--IDKKCPFTGT 251
           L T    +   P ++GN+  +   L FK+P +  +  +   DK C   GT
Sbjct: 73  LPTATRGRLHAPKRSGNKRGRQKRLSFKSPSDLFDSKFGITDKSCSHCGT 122

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>PRL_MOUSE (P06879) Prolactin precursor (PRL)|
          Length = 226

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -2

Query: 160 RLPALPGLFALSAFLVLRKTFGCLRKD 80
           +LP+L G+   S  L LR T  CLR+D
Sbjct: 179 QLPSLQGVDEESKILSLRNTIRCLRRD 205

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>CCAR1_MOUSE (Q8CH18) Cell division cycle and apoptosis regulator protein 1|
           (Cell cycle and apoptosis regulatory protein 1) (CARP-1)
          Length = 1146

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 17/63 (26%), Positives = 29/63 (46%)
 Frame = +3

Query: 66  EQTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCPFT 245
           +Q +++ L QP V L T  +    +P          + + + TPR + + T   K+  FT
Sbjct: 96  QQPQQTILTQPAVALPTSLSLSTPQPAA-------QITVSYPTPRSSQQQTQPQKQRVFT 148

Query: 246 GTV 254
           G V
Sbjct: 149 GVV 151


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,825,712
Number of Sequences: 219361
Number of extensions: 963000
Number of successful extensions: 3080
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 2962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3073
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result