| Clone Name | bast50h12 |
|---|---|
| Clone Library Name | barley_pub |
>STO_ARATH (Q96288) Salt-tolerance protein| Length = 248 Score = 137 bits (346), Expect = 8e-33 Identities = 65/100 (65%), Positives = 71/100 (71%) Frame = +3 Query: 120 MKIQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDIC 299 MKIQCD LC +CD+EIHAANKLASKHQRL L++L K PRCDIC Sbjct: 1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60 Query: 300 QEKAAFIFCVEDRALFCRDCDEPIHVPGTLXGNHQRYLAT 419 QEKAAFIFCVEDRAL CRDCDE IHV + NHQR+LAT Sbjct: 61 QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLAT 100
>STH_ARATH (Q9SID1) Salt tolerance-like protein| Length = 238 Score = 137 bits (344), Expect = 1e-32 Identities = 65/100 (65%), Positives = 69/100 (69%) Frame = +3 Query: 120 MKIQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDIC 299 MKIQCD LCA+CDVE+HAANKLASKHQRL LD+L K P CDIC Sbjct: 1 MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDIC 60 Query: 300 QEKAAFIFCVEDRALFCRDCDEPIHVPGTLXGNHQRYLAT 419 EKAAFIFCVEDRAL CRDCDE H P T NHQR+LAT Sbjct: 61 LEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLAT 100
>STHY_ARATH (Q9SYM2) Putative salt tolerance-like protein At1g78600| Length = 299 Score = 106 bits (264), Expect = 3e-23 Identities = 49/100 (49%), Positives = 59/100 (59%) Frame = +3 Query: 120 MKIQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDIC 299 MKIQC+ LC CD +IHAANKLA KHQR+PL A + +P+CDIC Sbjct: 1 MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC 60 Query: 300 QEKAAFIFCVEDRALFCRDCDEPIHVPGTLXGNHQRYLAT 419 QE + F FC++DRAL CR CD IH HQR+L T Sbjct: 61 QEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLT 100 Score = 32.3 bits (72), Expect = 0.47 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = +3 Query: 189 LCARCDVEIHAANKLASKHQRLPLDALGAKLPRCD 293 LC +CDV IH N S HQR L + L D Sbjct: 76 LCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESID 110
>STHX_ARATH (Q9LQZ7) Putative salt tolerance-like protein At1g75540| Length = 331 Score = 89.7 bits (221), Expect = 2e-18 Identities = 43/103 (41%), Positives = 53/103 (51%), Gaps = 3/103 (2%) Frame = +3 Query: 120 MKIQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPL---DALGAKLPRC 290 MKI+CD LC CD ++H ANKLASKH R L + P C Sbjct: 1 MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60 Query: 291 DICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLXGNHQRYLAT 419 DICQ+K A +FC +DRA+ C+DCD IH H R+L T Sbjct: 61 DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLT 103
>COL3_ARATH (Q9SK53) Zinc finger protein CONSTANS-LIKE 3| Length = 294 Score = 65.1 bits (157), Expect = 6e-11 Identities = 32/92 (34%), Positives = 42/92 (45%) Frame = +3 Query: 132 CDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQEKA 311 CDS LC CD +IH ANKLAS+H+R+ L C++C++ Sbjct: 8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWL---------CEVCEQAP 58 Query: 312 AFIFCVEDRALFCRDCDEPIHVPGTLXGNHQR 407 A + C D A C CD IH L H+R Sbjct: 59 AHVTCKADAAALCVTCDRDIHSANPLSRRHER 90 Score = 35.8 bits (81), Expect = 0.042 Identities = 15/32 (46%), Positives = 23/32 (71%), Gaps = 4/32 (12%) Frame = +3 Query: 189 LCARCDVEIHAANKLASKHQRLPL----DALG 272 LC CD +IH+AN L+ +H+R+P+ DA+G Sbjct: 70 LCVTCDRDIHSANPLSRRHERVPITPFYDAVG 101
>COL1_ARATH (O50055) Zinc finger protein CONSTANS-LIKE 1| Length = 355 Score = 64.7 bits (156), Expect = 8e-11 Identities = 31/92 (33%), Positives = 41/92 (44%) Frame = +3 Query: 132 CDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQEKA 311 CD+ LC+ CD ++HAAN+LAS+H+R+ + C C+ Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRV---------CQSCERAP 62 Query: 312 AFIFCVEDRALFCRDCDEPIHVPGTLXGNHQR 407 A FC D A C CD IH L HQR Sbjct: 63 AAFFCKADAASLCTTCDSEIHSANPLARRHQR 94 Score = 39.3 bits (90), Expect = 0.004 Identities = 17/43 (39%), Positives = 21/43 (48%) Frame = +3 Query: 132 CDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPL 260 C S LC CD EIH+AN LA +HQR+P+ Sbjct: 55 CQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPI 97
>COL4_ARATH (Q940T9) Zinc finger protein CONSTANS-LIKE 4| Length = 362 Score = 64.3 bits (155), Expect = 1e-10 Identities = 32/96 (33%), Positives = 43/96 (44%) Frame = +3 Query: 132 CDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQEKA 311 CDS LC CD ++HAANKLAS+H R+ + C++C++ Sbjct: 6 CDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWM---------CEVCEQAP 56 Query: 312 AFIFCVEDRALFCRDCDEPIHVPGTLXGNHQRYLAT 419 A + C D A C CD IH L H+R T Sbjct: 57 AHVTCKADAAALCVTCDRDIHSANPLARRHERVPVT 92
>COL2_ARATH (Q96502) Zinc finger protein CONSTANS-LIKE 2| Length = 347 Score = 61.2 bits (147), Expect = 9e-10 Identities = 32/105 (30%), Positives = 43/105 (40%) Frame = +3 Query: 93 QRESKKSRGMKIQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALG 272 + ES +S CD+ LC CD +HAAN++AS+H+R+ + Sbjct: 3 KEESNESGTWARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRV---- 58 Query: 273 AKLPRCDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLXGNHQR 407 C C+ A C D A C CD IH L HQR Sbjct: 59 -----CQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQR 98 Score = 41.6 bits (96), Expect = 8e-04 Identities = 19/48 (39%), Positives = 23/48 (47%) Frame = +3 Query: 132 CDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGA 275 C S LC CD EIH+AN LA +HQR+P+ L A Sbjct: 59 CQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPILPLSA 106
>CONS_ARATH (Q39057) Zinc finger protein CONSTANS| Length = 373 Score = 58.9 bits (141), Expect = 5e-09 Identities = 30/106 (28%), Positives = 46/106 (43%) Frame = +3 Query: 90 GQRESKKSRGMKIQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDAL 269 G E+ ++R CD+ LC CD ++H+AN++AS+H+R+ + Sbjct: 10 GSGENNRAR----PCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRV--- 62 Query: 270 GAKLPRCDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLXGNHQR 407 C+ C+ A C D A C CD +H L HQR Sbjct: 63 ------CESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQR 102 Score = 39.3 bits (90), Expect = 0.004 Identities = 16/43 (37%), Positives = 22/43 (51%) Frame = +3 Query: 132 CDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPL 260 C+S LC CD E+H+AN LA +HQR+P+ Sbjct: 63 CESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPI 105
>COL13_ARATH (O82256) Zinc finger protein CONSTANS-LIKE 13| Length = 332 Score = 51.2 bits (121), Expect = 1e-06 Identities = 25/81 (30%), Positives = 36/81 (44%) Frame = +3 Query: 132 CDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQEKA 311 CD LC CD ++H AN+L +KH R L CD C E Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLL---------CDSCNESP 63 Query: 312 AFIFCVEDRALFCRDCDEPIH 374 + +FC +R++ C++CD H Sbjct: 64 SSLFCETERSVLCQNCDWQHH 84 Score = 40.8 bits (94), Expect = 0.001 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = +3 Query: 288 CDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLXGNHQRYL 413 CD C A ++C D A C CD+ +HV L H R L Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSL 54
>COL14_ARATH (O22800) Zinc finger protein CONSTANS-LIKE 14| Length = 402 Score = 49.3 bits (116), Expect = 4e-06 Identities = 22/73 (30%), Positives = 35/73 (47%) Frame = +3 Query: 189 LCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQEKAAFIFCVEDRALFCRDCDEP 368 LC CD +H+AN L+ KH R + CD C ++ + C D + C++CD Sbjct: 31 LCLPCDQHVHSANLLSRKHVRSQI---------CDNCSKEPVSVRCFTDNLVLCQECDWD 81 Query: 369 IHVPGTLXGNHQR 407 +H + H+R Sbjct: 82 VHGSCSSSATHER 94 Score = 38.9 bits (89), Expect = 0.005 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = +3 Query: 288 CDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLXGNHQR 407 C+ C E+ A +FC D A C CD+ +H L H R Sbjct: 12 CEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVR 51
>COL15_ARATH (Q9C7E8) Zinc finger protein CONSTANS-LIKE 15| Length = 433 Score = 49.3 bits (116), Expect = 4e-06 Identities = 25/99 (25%), Positives = 39/99 (39%) Frame = +3 Query: 111 SRGMKIQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRC 290 S ++ CD LC CD ++H AN L+ KH R + C Sbjct: 2 SSSERVPCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQI---------C 52 Query: 291 DICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLXGNHQR 407 D C + + C D + C++CD +H ++ H R Sbjct: 53 DNCGNEPVSVRCFTDNLILCQECDWDVHGSCSVSDAHVR 91
>COLX_ARATH (Q9C9F4) Putative zinc finger protein At1g68190| Length = 356 Score = 47.0 bits (110), Expect = 2e-05 Identities = 21/73 (28%), Positives = 35/73 (47%) Frame = +3 Query: 189 LCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQEKAAFIFCVEDRALFCRDCDEP 368 LC CD ++H+AN L+ +H R L CD C+ + + C + + C C++ Sbjct: 33 LCLTCDAKVHSANSLSGRHLRTVL---------CDSCKNQPCVVRCFDHKMFLCHGCNDK 83 Query: 369 IHVPGTLXGNHQR 407 H G+ H+R Sbjct: 84 FHGGGS--SEHRR 94 Score = 40.0 bits (92), Expect = 0.002 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = +3 Query: 288 CDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLXGNHQR 407 C+ C+ A ++C+ D A C CD +H +L G H R Sbjct: 14 CEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLR 53
>COL5_ARATH (Q9FHH8) Zinc finger protein CONSTANS-LIKE 5| Length = 355 Score = 47.0 bits (110), Expect = 2e-05 Identities = 24/92 (26%), Positives = 37/92 (40%) Frame = +3 Query: 132 CDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQEKA 311 CD+ LC CD IH+ ++H+R+ + C++C++ Sbjct: 22 CDACKSVTAAVFCRVDSAFLCIACDTRIHSF----TRHERVWV---------CEVCEQAP 68 Query: 312 AFIFCVEDRALFCRDCDEPIHVPGTLXGNHQR 407 A + C D A C CD IH L H+R Sbjct: 69 AAVTCKADAAALCVSCDADIHSANPLASRHER 100 Score = 39.7 bits (91), Expect = 0.003 Identities = 14/25 (56%), Positives = 21/25 (84%) Frame = +3 Query: 189 LCARCDVEIHAANKLASKHQRLPLD 263 LC CD +IH+AN LAS+H+R+P++ Sbjct: 80 LCVSCDADIHSANPLASRHERVPVE 104 Score = 35.0 bits (79), Expect = 0.072 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = +3 Query: 270 GAKLPRCDICQEKAAFIFCVEDRALFCRDCDEPIH 374 GA CD C+ A +FC D A C CD IH Sbjct: 16 GAAARSCDACKSVTAAVFCRVDSAFLCIACDTRIH 50
>COL9_ARATH (Q9SSE5) Zinc finger protein CONSTANS-LIKE 9| Length = 372 Score = 46.2 bits (108), Expect = 3e-05 Identities = 20/58 (34%), Positives = 31/58 (53%) Frame = +3 Query: 189 LCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQEKAAFIFCVEDRALFCRDCD 362 LC CD +H+AN L+ +H R + C+ C + A + CVE+R C++CD Sbjct: 24 LCLSCDRSVHSANALSKRHSRTLV---------CERCNAQPATVRCVEERVSLCQNCD 72 Score = 40.8 bits (94), Expect = 0.001 Identities = 15/42 (35%), Positives = 20/42 (47%) Frame = +3 Query: 288 CDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLXGNHQRYL 413 CD C E+ + ++C D A C CD +H L H R L Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTL 46
>COL12_ARATH (Q9LJ44) Putative zinc finger protein CONSTANS-LIKE 12| Length = 337 Score = 44.3 bits (103), Expect = 1e-04 Identities = 21/80 (26%), Positives = 36/80 (45%) Frame = +3 Query: 120 MKIQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDIC 299 M+ +CD LC CDV +H+AN L+ +H R + C+ C Sbjct: 1 MEPKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLI---------CEKC 51 Query: 300 QEKAAFIFCVEDRALFCRDC 359 + A I C++++ +C+ C Sbjct: 52 FSQPAAIRCLDEKVSYCQGC 71 Score = 39.7 bits (91), Expect = 0.003 Identities = 17/44 (38%), Positives = 21/44 (47%) Frame = +3 Query: 282 PRCDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLXGNHQRYL 413 P+CD C A I+C D A C +CD +H L H R L Sbjct: 3 PKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSL 46
>COL10_ARATH (Q9LUA9) Zinc finger protein CONSTANS-LIKE 10| Length = 373 Score = 43.5 bits (101), Expect = 2e-04 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 2/75 (2%) Frame = +3 Query: 189 LCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQEKAAFIFCVEDRALFCRDCDEP 368 LC CD +H+AN L+ +H R + C+ C + A + C ++R C++CD Sbjct: 24 LCLSCDRNVHSANALSKRHSRTLV---------CERCNAQPASVRCSDERVSLCQNCDWS 74 Query: 369 IH--VPGTLXGNHQR 407 H T +H+R Sbjct: 75 GHDGKNSTTTSHHKR 89 Score = 40.4 bits (93), Expect = 0.002 Identities = 15/42 (35%), Positives = 20/42 (47%) Frame = +3 Query: 288 CDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLXGNHQRYL 413 CD C E+ + ++C D A C CD +H L H R L Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTL 46
>COL11_ARATH (O23379) Putative zinc finger protein CONSTANS-LIKE 11| Length = 330 Score = 42.4 bits (98), Expect = 5e-04 Identities = 20/80 (25%), Positives = 32/80 (40%) Frame = +3 Query: 120 MKIQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDIC 299 M+ +CD LC CDV +H+AN L+ +H R L C+ C Sbjct: 1 MEARCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLL---------CEKC 51 Query: 300 QEKAAFIFCVEDRALFCRDC 359 + + C+ + C+ C Sbjct: 52 SLQPTAVHCMNENVSLCQGC 71 Score = 40.4 bits (93), Expect = 0.002 Identities = 17/43 (39%), Positives = 21/43 (48%) Frame = +3 Query: 285 RCDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLXGNHQRYL 413 RCD C + A I+C D A C +CD +H L H R L Sbjct: 4 RCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSL 46
>COL16_ARATH (Q8RWD0) Zinc finger protein CONSTANS-LIKE 16| Length = 417 Score = 42.0 bits (97), Expect = 6e-04 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Frame = +3 Query: 261 DALGAKLPR-CDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLXGNHQR 407 +A+GAK R CD C ++ A +C D A C+ CD +H L H+R Sbjct: 7 NAVGAKTARACDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHER 56 Score = 32.7 bits (73), Expect = 0.36 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = +3 Query: 132 CDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPL 260 CDS LC CD +H+AN LA +H+R+ L Sbjct: 17 CDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRL 59
>COL8_ARATH (Q9M9B3) Putative zinc finger protein CONSTANS-LIKE 8| Length = 313 Score = 39.7 bits (91), Expect = 0.003 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Frame = +3 Query: 276 KLPR-CDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLXGNHQR 407 K PR C++C K A +C D A C CDE +H + H+R Sbjct: 10 KQPRACELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHER 54 Score = 31.6 bits (70), Expect = 0.80 Identities = 12/24 (50%), Positives = 18/24 (75%) Frame = +3 Query: 189 LCARCDVEIHAANKLASKHQRLPL 260 LC CD +H+AN +A+KH+R+ L Sbjct: 34 LCHVCDESVHSANHVATKHERVCL 57
>COL6_ARATH (Q8LG76) Zinc finger protein CONSTANS-LIKE 6| Length = 406 Score = 38.9 bits (89), Expect = 0.005 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Frame = +3 Query: 264 ALGAKLPR-CDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLXGNHQR 407 A+G K R CD C ++ A +C D A C CD +H L H+R Sbjct: 8 AVGGKTARACDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHER 56 Score = 34.3 bits (77), Expect = 0.12 Identities = 16/48 (33%), Positives = 22/48 (45%) Frame = +3 Query: 132 CDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGA 275 CDS LC CD +H+AN LA +H+R+ L + A Sbjct: 17 CDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRLKSASA 64
>ARD1_CAEEL (Q09654) Putative GTP-binding protein ard-1 homolog| Length = 539 Score = 37.4 bits (85), Expect = 0.015 Identities = 24/89 (26%), Positives = 32/89 (35%), Gaps = 5/89 (5%) Frame = +3 Query: 108 KSRGMKIQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPR 287 K R + ++CD LC RC H+ N L SKH+R+PL L Sbjct: 100 KERLLNLECDEDSEHVAVIYCTVCDSNLCERCSESTHSTNVL-SKHRRIPLTEKPPPLVH 158 Query: 288 CDICQEKAAFIFCVE-----DRALFCRDC 359 C + C E + L C C Sbjct: 159 CRLHSSYVVEFVCKELSCDTESPLMCMMC 187
>COL7_ARATH (Q9C9A9) Putative zinc finger protein CONSTANS-LIKE 7| Length = 392 Score = 34.7 bits (78), Expect = 0.094 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = +3 Query: 288 CDICQEKA-AFIFCVEDRALFCRDCDEPIHVPGTLXGNHQR 407 CD C +++ A +C D A C+ CD IH L H+R Sbjct: 22 CDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHER 62 Score = 34.3 bits (77), Expect = 0.12 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = +3 Query: 189 LCARCDVEIHAANKLASKHQRLPLDA 266 LC CD IH+AN LA +H+R+ L + Sbjct: 42 LCQSCDASIHSANHLAKRHERVRLQS 67
>ARD1_HUMAN (P36406) GTP-binding protein ARD-1 (ADP-ribosylation factor domain| protein 1) (Tripartite motif protein 23) (RING finger protein 46) Length = 574 Score = 32.3 bits (72), Expect = 0.47 Identities = 23/84 (27%), Positives = 31/84 (36%), Gaps = 4/84 (4%) Frame = +3 Query: 126 IQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQE 305 I+CD LC+ C H+ LA KH+R+PL + C Q Sbjct: 125 IRCDEDEAHLASVYCTVCATHLCSECSQVTHSTKTLA-KHRRVPLADKPHEKTMCSQHQV 183 Query: 306 KAAFIFCVED----RALFCRDCDE 365 A C+E+ L C C E Sbjct: 184 HAIEFVCLEEGCQTSPLMCCVCKE 207
>YS85_CAEEL (Q09623) Hypothetical RING finger protein ZK945.5 in chromosome II| Length = 250 Score = 32.0 bits (71), Expect = 0.61 Identities = 21/95 (22%), Positives = 32/95 (33%), Gaps = 6/95 (6%) Frame = +3 Query: 93 QRESKKSRGMKIQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALG 272 ++ KK R CD LC C IH+ + LA +++ Sbjct: 93 EKNEKKERNKNGVCDENTNHHASNYCETCDADLCEECWTWIHSISTLAHHEKKM------ 146 Query: 273 AKLPRCDICQEKAAFIFCVEDRA------LFCRDC 359 P C K+ + C+ DR L C +C Sbjct: 147 ISTPDCQFHPGKSISLVCMRDRCKKRQNRLMCSEC 181
>ARD1_RAT (P36407) GTP-binding protein ARD-1 (ADP-ribosylation factor domain| protein 1) (Tripartite motif protein 23) (Fragment) Length = 554 Score = 31.6 bits (70), Expect = 0.80 Identities = 23/84 (27%), Positives = 31/84 (36%), Gaps = 4/84 (4%) Frame = +3 Query: 126 IQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQE 305 I+CD LC+ C H+ LA KH+R+PL + C Q Sbjct: 105 IRCDEDEAHVASVYCTVCATHLCSECSQVTHSTKTLA-KHRRVPLADKPHEKTMCCQHQV 163 Query: 306 KAAFIFCVEDRA----LFCRDCDE 365 A C+E+ L C C E Sbjct: 164 HAIEFVCLEEACQTSPLMCCVCKE 187
>ARD1_MOUSE (Q8BGX0) GTP-binding protein ARD-1 (ADP-ribosylation factor domain| protein 1) (Tripartite motif protein 23) Length = 574 Score = 30.4 bits (67), Expect = 1.8 Identities = 23/84 (27%), Positives = 31/84 (36%), Gaps = 4/84 (4%) Frame = +3 Query: 126 IQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQE 305 I+CD LC+ C H+ LA KH+R+PL + C Q Sbjct: 125 IRCDEDEAHVASVYCTVCATHLCSDCSQVTHSTKTLA-KHRRVPLADKPHEKTMCCQHQV 183 Query: 306 KAAFIFCVED----RALFCRDCDE 365 A C+E+ L C C E Sbjct: 184 HAIEFVCLEEGCQTSPLMCCVCKE 207 Score = 28.5 bits (62), Expect = 6.7 Identities = 14/46 (30%), Positives = 20/46 (43%) Frame = +3 Query: 270 GAKLPRCDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLXGNHQR 407 G + RCD + A ++C C DC + H TL H+R Sbjct: 121 GESIIRCDEDEAHVASVYCTVCATHLCSDCSQVTHSTKTL-AKHRR 165
>METE_SALTY (Q9L6N1) 5-methyltetrahydropteroyltriglutamate--homocysteine| methyltransferase (EC 2.1.1.14) (Methionine synthase, vitamin-B12 independent isozyme) (Cobalamin-independent methionine synthase) Length = 753 Score = 30.0 bits (66), Expect = 2.3 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 7/63 (11%) Frame = +3 Query: 213 IHAANKLASKHQRLPLDAL-------GAKLPRCDICQEKAAFIFCVEDRALFCRDCDEPI 371 IH + +A HQRLP+D L G + R D+ ++ A V RAL+ + Sbjct: 266 IHGKDDVAELHQRLPVDWLLSAGLINGRNVWRADLTEKYAQINAIVGKRALWVASSCSLL 325 Query: 372 HVP 380 H P Sbjct: 326 HSP 328
>TRI46_MOUSE (Q7TNM2) Tripartite motif protein 46 (Tripartite, fibronectin| type-III and C-terminal SPRY motif protein) Length = 759 Score = 29.6 bits (65), Expect = 3.0 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%) Frame = +3 Query: 288 CDICQEKA--AFIFCVEDRALFCRDCDEPIHVPGTLXGNHQRYLAT 419 C +C+ A C E RA FC +C + H GT H+ L T Sbjct: 172 CQLCKPPPLEATKGCTECRATFCNECFKLFHPWGTQKAQHEPTLPT 217
>TRI46_HUMAN (Q7Z4K8) Tripartite motif protein 46 (Tripartite, fibronectin| type-III and C-terminal SPRY motif protein) Length = 759 Score = 29.6 bits (65), Expect = 3.0 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%) Frame = +3 Query: 288 CDICQEKA--AFIFCVEDRALFCRDCDEPIHVPGTLXGNHQRYLAT 419 C +C+ A C E RA FC +C + H GT H+ L T Sbjct: 172 CQLCKPPPLEATKGCTECRATFCNECFKLFHPWGTQKAQHEPTLPT 217
>XIS_SACER (P22876) Probable excisionase| Length = 98 Score = 28.5 bits (62), Expect = 6.7 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 8/54 (14%) Frame = -3 Query: 365 LVAVAAEERPVLDAEDEGG--------LLLADVAARELGAERVEREPLVLAGEL 228 L A+ AE++P + E E LL + AA++LG R + LV +GE+ Sbjct: 15 LAALLAEQQPAPEPEPEPAARRLPNRVLLTVEEAAKQLGLGRTKTYALVASGEI 68
>METE_SALTI (Q8Z3B6) 5-methyltetrahydropteroyltriglutamate--homocysteine| methyltransferase (EC 2.1.1.14) (Methionine synthase, vitamin-B12 independent isozyme) (Cobalamin-independent methionine synthase) Length = 753 Score = 28.5 bits (62), Expect = 6.7 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 7/63 (11%) Frame = +3 Query: 213 IHAANKLASKHQRLPLDAL-------GAKLPRCDICQEKAAFIFCVEDRALFCRDCDEPI 371 IH + + HQRLP+D L G + R D+ ++ A V RAL+ + Sbjct: 266 IHGKDDVVELHQRLPVDWLLSAGLINGRNVWRADLTEKYAQINAIVGKRALWVASSCSLL 325 Query: 372 HVP 380 H P Sbjct: 326 HSP 328 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.308 0.122 0.337 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,451,920 Number of Sequences: 219361 Number of extensions: 406153 Number of successful extensions: 1138 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 1073 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1110 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits)