ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast50h11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ338101.1|HSA338101 Homo sapiens genomic sequence surroundi... 46 0.092
2dbj|AK132303.1| Mus musculus 15 days embryo head cDNA, RIKEN ful... 44 0.37
3gb|BC053426.1| Mus musculus quaking, mRNA (cDNA clone MGC:59277 ... 44 0.37
4gb|U44942.1|MMU44942 Mus musculus recombinant quaking gene sequence 44 0.37
5gb|U44940.1|MMU44940 Mus musculus quaking type I (QKI) mRNA, com... 44 0.37
6ref|XM_468230.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.4
7gb|AC113177.16| Mus musculus chromosome 15, clone RP23-447G7, co... 42 1.4
8gb|AC137607.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
9gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 42 1.4
10gb|AC156838.3| Pan troglodytes BAC clone CH251-75L15 from chromo... 42 1.4
11gb|CP000249.1| Frankia sp. CcI3, complete genome 42 1.4
12gb|AC159107.2| Pan troglodytes BAC clone CH251-567D12 from chrom... 42 1.4
13dbj|AB179471.1| Macaca fascicularis testis cDNA clone: QtsA-2080... 42 1.4
14dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
15dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
16dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
17gb|AE004959.1| Pseudomonas aeruginosa PAO1, section 520 of 529 o... 42 1.4
18dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
19dbj|AP003545.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
20dbj|AP004054.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
21dbj|BS000186.1| Pan troglodytes chromosome 22 clone:RP43-074L01,... 42 1.4
22dbj|AP005115.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
23dbj|AK121357.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
24emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 42 1.4
25gb|AC139037.10| Mus musculus chromosome 5, clone RP23-310J14, co... 40 5.7
26gb|AC117203.4| Mus musculus BAC clone RP23-251N4 from chromosome... 40 5.7
27gb|AC160982.5| Mus musculus BAC clone RP23-351J19 from chromosom... 40 5.7
28ref|XM_509386.1| PREDICTED: Pan troglodytes similar to FLJ30092 ... 40 5.7
29gb|AC169503.1| Mus musculus BAC clone RP24-281B5 from chromosome... 40 5.7
30gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence 40 5.7
31gb|AC159443.1| Trypanosoma brucei chromosome 5 clone RPCI93-30H1... 40 5.7
32gb|AC112972.9| Mus musculus chromosome 15, clone RP24-450J12, co... 40 5.7
33gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 5.7
34ref|XM_368715.1| Magnaporthe grisea 70-15 chromosome VI hypothet... 40 5.7
35gb|AC111135.10| Mus musculus chromosome 9, clone RP23-349N4, com... 40 5.7
36gb|AC123605.8| Mus musculus chromosome 5, clone RP24-176O2, comp... 40 5.7
37gb|AC116591.4| Mus musculus BAC clone RP24-90K1 from chromosome ... 40 5.7
38gb|AC146547.2| Gasterosteus aculeatus clone CH213-33E5, complete... 40 5.7
39ref|XM_987484.1| PREDICTED: Mus musculus similar to fibroblast g... 40 5.7
40gb|AY327250.1| Manduca sexta ephrin mRNA, complete cds 40 5.7
41emb|BX936291.25| Zebrafish DNA sequence from clone DKEY-250A11 i... 40 5.7
42gb|AC132362.3| Mus musculus BAC clone RP23-455B5 from chromosome... 40 5.7
43gb|AF450245.1| Mus musculus clone BAC199M11, complete sequence 40 5.7
44gb|AC124169.3| Mus musculus BAC clone RP23-151G15 from 19, compl... 40 5.7
45gb|AC102016.4| Mus musculus chromosome 5, clone RP24-567O8, comp... 40 5.7
46gb|AC157606.5| Mus musculus chromosome 7, clone RP23-466J2, comp... 40 5.7
47emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete ... 40 5.7
48emb|AL645546.5| Mouse DNA sequence from clone RP23-124G18 on chr... 40 5.7
49gb|AC160983.2| Mus musculus BAC clone RP23-335A9 from chromosome... 40 5.7
50gb|AC160634.2| Mus musculus BAC clone RP23-429J21 from chromosom... 40 5.7
51gb|AF336860.1|AF336860 Rattus norvegicus synaptotagmin VIIe (Syt... 40 5.7
52gb|AF336857.1|AF336857 Rattus norvegicus synaptotagmin VIIb (Syt... 40 5.7
53gb|AF336856.1|AF336856 Rattus norvegicus synaptotagmin VIIa (Syt... 40 5.7
54gb|AF336855.1|AF336855 Rattus norvegicus synaptotagmin VIIL (Syt... 40 5.7
55gb|AF336852.1|AF336852 Rattus norvegicus synaptotagmin VIIT1 (Sy... 40 5.7
56gb|AC015977.9| Homo sapiens BAC clone RP11-527I18 from 2, comple... 40 5.7
57gb|AC132381.4| Mus musculus BAC clone RP23-424F5 from chromosome... 40 5.7
58dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 5.7
59gb|AC112933.16| Mus musculus chromosome 5, clone RP24-418J2, com... 40 5.7
60emb|AL954847.17| Zebrafish DNA sequence from clone DKEY-68G8 in ... 40 5.7
61emb|BX088539.6| Mouse DNA sequence from clone RP23-152D15 on chr... 40 5.7
62gb|AC154727.2| Mus musculus BAC clone RP24-375I15 from 14, compl... 40 5.7
63dbj|AP001719.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 5.7
64gb|AC131033.7| Mus musculus chromosome 15, clone RP23-350J23, co... 40 5.7
65emb|AL833804.16| Mouse DNA sequence from clone RP23-20A6 on chro... 40 5.7
66gb|AC140253.3| Mus musculus BAC clone RP23-298L2 from 3, complet... 40 5.7
67emb|AL773540.18| Mouse DNA sequence from clone RP23-177L19 on ch... 40 5.7
68emb|CT009512.6| Mouse DNA sequence from clone RP23-94B13 on chro... 40 5.7
69emb|CT025528.10| Mouse DNA sequence from clone RP23-205O23 on ch... 40 5.7
70gb|AC161112.5| Mus musculus BAC clone RP24-468O24 from chromosom... 40 5.7
71emb|AL732450.5| Mouse DNA sequence from clone RP23-190H10 on chr... 40 5.7
72emb|X66455.1|MMFGFR2 M.musculus promoter region of fibroblast gr... 40 5.7
73gb|AC112935.24| Mus musculus chromosome 15, clone RP24-92L23, co... 40 5.7
74dbj|AP000467.1| Homo sapiens genomic DNA, chromosome 21q22.1, cl... 40 5.7 
>emb|AJ338101.1|HSA338101 Homo sapiens genomic sequence surrounding NotI site, clone NL1-DB1R
          Length = 640

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 299 agagatggatgcggtgtccgagg 321
           |||||||||||||||||||||||
Sbjct: 339 agagatggatgcggtgtccgagg 317
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>dbj|AK132303.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
           library, clone:4021402O04 product:quaking, full insert
           sequence
          Length = 5431

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 91  cgcccctccctcctctcctccg 112
           ||||||||||||||||||||||
Sbjct: 426 cgcccctccctcctctcctccg 447
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>gb|BC053426.1| Mus musculus quaking, mRNA (cDNA clone MGC:59277 IMAGE:6335004),
           complete cds
          Length = 2208

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 91  cgcccctccctcctctcctccg 112
           ||||||||||||||||||||||
Sbjct: 97  cgcccctccctcctctcctccg 118
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>gb|U44942.1|MMU44942 Mus musculus recombinant quaking gene sequence
          Length = 3536

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 91   cgcccctccctcctctcctccg 112
            ||||||||||||||||||||||
Sbjct: 2600 cgcccctccctcctctcctccg 2621
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>gb|U44940.1|MMU44940 Mus musculus quaking type I (QKI) mRNA, complete cds
          Length = 6747

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 91  cgcccctccctcctctcctccg 112
           ||||||||||||||||||||||
Sbjct: 444 cgcccctccctcctctcctccg 465
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>ref|XM_468230.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3771

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 93  cccctccctcctctcctccgc 113
           |||||||||||||||||||||
Sbjct: 413 cccctccctcctctcctccgc 433
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>gb|AC113177.16| Mus musculus chromosome 15, clone RP23-447G7, complete sequence
          Length = 179268

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 91    cgcccctccctcctctcctcc 111
             |||||||||||||||||||||
Sbjct: 94106 cgcccctccctcctctcctcc 94126
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>gb|AC137607.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0006O14, complete sequence
          Length = 142764

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 91    cgcccctccctcctctcctcc 111
             |||||||||||||||||||||
Sbjct: 99947 cgcccctccctcctctcctcc 99967
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 12     cgccagccccgccgccgcagc 32
              |||||||||||||||||||||
Sbjct: 124733 cgccagccccgccgccgcagc 124713
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>gb|AC156838.3| Pan troglodytes BAC clone CH251-75L15 from chromosome unknown, complete
             sequence
          Length = 180639

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 6     cctcgtcgccagccccgccgccgcagccg 34
             |||||||||| ||||||||||||| ||||
Sbjct: 78245 cctcgtcgccggccccgccgccgccgccg 78273
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 14     ccagccccgccgccgcagccg 34
              |||||||||||||||||||||
Sbjct: 184232 ccagccccgccgccgcagccg 184212
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>gb|AC159107.2| Pan troglodytes BAC clone CH251-567D12 from chromosome unknown, complete
              sequence
          Length = 198786

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 6      cctcgtcgccagccccgccgccgcagccg 34
              |||||||||| ||||||||||||| ||||
Sbjct: 134342 cctcgtcgccggccccgccgccgccgccg 134314
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>dbj|AB179471.1| Macaca fascicularis testis cDNA clone: QtsA-20808, similar to human
           SH3-domain GRB2-like endophilin B1 (SH3GLB1), mRNA,
           RefSeq: NM_016009.2
          Length = 2262

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 12  cgccagccccgccgccgcagc 32
           |||||||||||||||||||||
Sbjct: 183 cgccagccccgccgccgcagc 163
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 91       cgcccctccctcctctcctcc 111
                |||||||||||||||||||||
Sbjct: 15851937 cgcccctccctcctctcctcc 15851917



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 91       cgcccctccctcctctcctcc 111
                |||||||||||||||||||||
Sbjct: 15387809 cgcccctccctcctctcctcc 15387829
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 91       cgcccctccctcctctcctcc 111
                |||||||||||||||||||||
Sbjct: 10316382 cgcccctccctcctctcctcc 10316402
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 93       cccctccctcctctcctccgc 113
                |||||||||||||||||||||
Sbjct: 33719317 cccctccctcctctcctccgc 33719337
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>gb|AE004959.1| Pseudomonas aeruginosa PAO1, section 520 of 529 of the complete
           genome
          Length = 10871

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 10  gtcgccagccccgccgccgcagccg 34
           |||||| ||||||||||||||||||
Sbjct: 738 gtcgcccgccccgccgccgcagccg 762
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>dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0026P23
          Length = 180188

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 91    cgcccctccctcctctcctcc 111
             |||||||||||||||||||||
Sbjct: 64940 cgcccctccctcctctcctcc 64920
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>dbj|AP003545.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0613F06
          Length = 184289

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 91    cgcccctccctcctctcctcc 111
             |||||||||||||||||||||
Sbjct: 55324 cgcccctccctcctctcctcc 55344
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>dbj|AP004054.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1249_F12
          Length = 133205

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 93    cccctccctcctctcctccgc 113
             |||||||||||||||||||||
Sbjct: 87724 cccctccctcctctcctccgc 87744
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>dbj|BS000186.1| Pan troglodytes chromosome 22 clone:RP43-074L01, map 22, complete
             sequences
          Length = 176135

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 6     cctcgtcgccagccccgccgccgcagccg 34
             |||||||||| ||||||||||||| ||||
Sbjct: 83301 cctcgtcgccggccccgccgccgccgccg 83329
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>dbj|AP005115.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0700F06
          Length = 139277

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 93    cccctccctcctctcctccgc 113
             |||||||||||||||||||||
Sbjct: 50184 cccctccctcctctcctccgc 50204
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>dbj|AK121357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123B03, full
           insert sequence
          Length = 3770

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 93  cccctccctcctctcctccgc 113
           |||||||||||||||||||||
Sbjct: 412 cccctccctcctctcctccgc 432
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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 128   gcgaagatccgcccggacgcg 148
             |||||||||||||||||||||
Sbjct: 79502 gcgaagatccgcccggacgcg 79522
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>gb|AC139037.10| Mus musculus chromosome 5, clone RP23-310J14, complete sequence
          Length = 194093

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 93     cccctccctcctctcctccg 112
              ||||||||||||||||||||
Sbjct: 102830 cccctccctcctctcctccg 102849
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>gb|AC117203.4| Mus musculus BAC clone RP23-251N4 from chromosome 10, complete sequence
          Length = 231532

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 92    gcccctccctcctctcctcc 111
             ||||||||||||||||||||
Sbjct: 97538 gcccctccctcctctcctcc 97557
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>gb|AC160982.5| Mus musculus BAC clone RP23-351J19 from chromosome 12, complete
             sequence
          Length = 231693

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 92    gcccctccctcctctcctcc 111
             ||||||||||||||||||||
Sbjct: 43566 gcccctccctcctctcctcc 43585
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>ref|XM_509386.1| PREDICTED: Pan troglodytes similar to FLJ30092 protein (LOC452260),
           mRNA
          Length = 1211

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 79  cgtctccttcgtcgcccctc 98
           ||||||||||||||||||||
Sbjct: 197 cgtctccttcgtcgcccctc 216
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>gb|AC169503.1| Mus musculus BAC clone RP24-281B5 from chromosome 12, complete sequence
          Length = 163008

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 92    gcccctccctcctctcctcc 111
             ||||||||||||||||||||
Sbjct: 25628 gcccctccctcctctcctcc 25647
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>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence
          Length = 1608198

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    tcctgctgattttgggggtt 173
              ||||||||||||||||||||
Sbjct: 493518 tcctgctgattttgggggtt 493499
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>gb|AC159443.1| Trypanosoma brucei chromosome 5 clone RPCI93-30H13, complete sequence
          Length = 152941

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    tcctgctgattttgggggtt 173
              ||||||||||||||||||||
Sbjct: 110069 tcctgctgattttgggggtt 110050
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>gb|AC112972.9| Mus musculus chromosome 15, clone RP24-450J12, complete sequence
          Length = 148336

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    gcccctccctcctctcctcc 111
             ||||||||||||||||||||
Sbjct: 38745 gcccctccctcctctcctcc 38726
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 15      cagccccgccgccgcagccg 34
               ||||||||||||||||||||
Sbjct: 1267900 cagccccgccgccgcagccg 1267881
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>ref|XM_368715.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein
            (MG00529.4) partial mRNA
          Length = 4128

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 322  ttgccgatgccatcggtgca 341
            ||||||||||||||||||||
Sbjct: 2942 ttgccgatgccatcggtgca 2961
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>gb|AC111135.10| Mus musculus chromosome 9, clone RP23-349N4, complete sequence
          Length = 215213

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    gcccctccctcctctcctcc 111
             ||||||||||||||||||||
Sbjct: 37907 gcccctccctcctctcctcc 37888
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>gb|AC123605.8| Mus musculus chromosome 5, clone RP24-176O2, complete sequence
          Length = 211657

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 92     gcccctccctcctctcctcc 111
              ||||||||||||||||||||
Sbjct: 207125 gcccctccctcctctcctcc 207144
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>gb|AC116591.4| Mus musculus BAC clone RP24-90K1 from chromosome 14, complete sequence
          Length = 237561

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 92     gcccctccctcctctcctcc 111
              ||||||||||||||||||||
Sbjct: 196023 gcccctccctcctctcctcc 196004
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>gb|AC146547.2| Gasterosteus aculeatus clone CH213-33E5, complete sequence
          Length = 207268

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 93     cccctccctcctctcctccg 112
              ||||||||||||||||||||
Sbjct: 165909 cccctccctcctctcctccg 165928
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>ref|XM_987484.1| PREDICTED: Mus musculus similar to fibroblast growth factor receptor
            2 (LOC671508), mRNA
          Length = 3579

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 2    ctcccctcgtcgccagccccgccgccgcagcc 33
            ||||||||| |||| || ||||||||||||||
Sbjct: 1063 ctcccctcgccgcccgcgccgccgccgcagcc 1032
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>gb|AY327250.1| Manduca sexta ephrin mRNA, complete cds
          Length = 2510

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 10   gtcgccagccccgccgccgcagccgacg 37
            |||||| || ||||||||||||||||||
Sbjct: 991  gtcgccggcgccgccgccgcagccgacg 1018
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>emb|BX936291.25| Zebrafish DNA sequence from clone DKEY-250A11 in linkage group 13,
              complete sequence
          Length = 195395

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 404    ttggccgatgtggcgctttc 423
              ||||||||||||||||||||
Sbjct: 140834 ttggccgatgtggcgctttc 140853
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>gb|AC132362.3| Mus musculus BAC clone RP23-455B5 from chromosome 3, complete sequence
          Length = 164762

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 92    gcccctccctcctctcctcc 111
             ||||||||||||||||||||
Sbjct: 12661 gcccctccctcctctcctcc 12680
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>gb|AF450245.1| Mus musculus clone BAC199M11, complete sequence
          Length = 124254

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    gcccctccctcctctcctcc 111
             ||||||||||||||||||||
Sbjct: 71146 gcccctccctcctctcctcc 71127
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>gb|AC124169.3| Mus musculus BAC clone RP23-151G15 from 19, complete sequence
          Length = 201188

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    cgccagccccgccgccgcag 31
             ||||||||||||||||||||
Sbjct: 81626 cgccagccccgccgccgcag 81645
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>gb|AC102016.4| Mus musculus chromosome 5, clone RP24-567O8, complete sequence
          Length = 154115

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 92     gcccctccctcctctcctcc 111
              ||||||||||||||||||||
Sbjct: 138030 gcccctccctcctctcctcc 138049
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>gb|AC157606.5| Mus musculus chromosome 7, clone RP23-466J2, complete sequence
          Length = 174676

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 2     ctcccctcgtcgccagccccgccgccgcagcc 33
             ||||||||| |||| || ||||||||||||||
Sbjct: 43983 ctcccctcgccgcccgcgccgccgccgcagcc 44014
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>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29
          Length = 308050

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 37     ggtacccccaccgcccagcccgcc 60
              ||||||||||||||||| ||||||
Sbjct: 230478 ggtacccccaccgcccaccccgcc 230501
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>emb|AL645546.5| Mouse DNA sequence from clone RP23-124G18 on chromosome 13 Contains the
             V1ri3, V1ri6, V1rh4, V1rh19 and V1rh21 genes for
             vomeronasal 1 receptor proteins I3, I6, H4, H19 and H21, a
             V1rh and a V1ri pseudogene and a fatty acid elongase 2
             pseudogene, complete sequence
          Length = 122517

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 92    gcccctccctcctctcctcc 111
             ||||||||||||||||||||
Sbjct: 18589 gcccctccctcctctcctcc 18608
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>gb|AC160983.2| Mus musculus BAC clone RP23-335A9 from chromosome 9, complete sequence
          Length = 188085

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    gcccctccctcctctcctcc 111
             ||||||||||||||||||||
Sbjct: 94384 gcccctccctcctctcctcc 94365
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>gb|AC160634.2| Mus musculus BAC clone RP23-429J21 from chromosome 12, complete sequence
          Length = 176160

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 92     gcccctccctcctctcctcc 111
              ||||||||||||||||||||
Sbjct: 162847 gcccctccctcctctcctcc 162866
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>gb|AF336860.1|AF336860 Rattus norvegicus synaptotagmin VIIe (SytVII) mRNA, complete cds,
           alternatively spliced
          Length = 1932

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 12  cgccagccccgccgccgcag 31
           ||||||||||||||||||||
Sbjct: 267 cgccagccccgccgccgcag 248
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>gb|AF336857.1|AF336857 Rattus norvegicus synaptotagmin VIIb (SytVII) mRNA, complete cds,
           alternatively spliced
          Length = 1572

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 12  cgccagccccgccgccgcag 31
           ||||||||||||||||||||
Sbjct: 399 cgccagccccgccgccgcag 380
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>gb|AF336856.1|AF336856 Rattus norvegicus synaptotagmin VIIa (SytVII) mRNA, complete cds,
           alternatively spliced
          Length = 1563

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 12  cgccagccccgccgccgcag 31
           ||||||||||||||||||||
Sbjct: 267 cgccagccccgccgccgcag 248
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>gb|AF336855.1|AF336855 Rattus norvegicus synaptotagmin VIIL (SytVII) mRNA, complete cds,
           alternatively spliced
          Length = 2064

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 12  cgccagccccgccgccgcag 31
           ||||||||||||||||||||
Sbjct: 399 cgccagccccgccgccgcag 380
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>gb|AF336852.1|AF336852 Rattus norvegicus synaptotagmin VIIT1 (SytVII) mRNA, complete cds,
           alternatively spliced
          Length = 2187

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 12  cgccagccccgccgccgcag 31
           ||||||||||||||||||||
Sbjct: 522 cgccagccccgccgccgcag 503
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>gb|AC015977.9| Homo sapiens BAC clone RP11-527I18 from 2, complete sequence
          Length = 176625

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 92     gcccctccctcctctcctcc 111
              ||||||||||||||||||||
Sbjct: 152986 gcccctccctcctctcctcc 153005
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>gb|AC132381.4| Mus musculus BAC clone RP23-424F5 from chromosome 1, complete sequence
          Length = 207002

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 162    attttgggggttgttctctt 181
              ||||||||||||||||||||
Sbjct: 177163 attttgggggttgttctctt 177182
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 13     gccagccccgccgccgcagccgac 36
              ||||||||||||||||||| ||||
Sbjct: 386845 gccagccccgccgccgcagtcgac 386822
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>gb|AC112933.16| Mus musculus chromosome 5, clone RP24-418J2, complete sequence
          Length = 172244

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 92    gcccctccctcctctcctcc 111
             ||||||||||||||||||||
Sbjct: 10446 gcccctccctcctctcctcc 10465
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>emb|AL954847.17| Zebrafish DNA sequence from clone DKEY-68G8 in linkage group 13,
             complete sequence
          Length = 278040

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   ttggccgatgtggcgctttc 423
             ||||||||||||||||||||
Sbjct: 76526 ttggccgatgtggcgctttc 76507
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>emb|BX088539.6| Mouse DNA sequence from clone RP23-152D15 on chromosome X, complete
              sequence
          Length = 151751

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 92     gcccctccctcctctcctcc 111
              ||||||||||||||||||||
Sbjct: 120725 gcccctccctcctctcctcc 120706
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>gb|AC154727.2| Mus musculus BAC clone RP24-375I15 from 14, complete sequence
          Length = 189907

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 92    gcccctccctcctctcctcc 111
             ||||||||||||||||||||
Sbjct: 68954 gcccctccctcctctcctcc 68973
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>dbj|AP001719.1| Homo sapiens genomic DNA, chromosome 21q, section 63/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 6    cctcgtcgccagccccgccgccgc 29
            |||||||||| |||||||||||||
Sbjct: 5096 cctcgtcgccggccccgccgccgc 5119
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>gb|AC131033.7| Mus musculus chromosome 15, clone RP23-350J23, complete sequence
          Length = 219579

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    gcccctccctcctctcctcc 111
             ||||||||||||||||||||
Sbjct: 40260 gcccctccctcctctcctcc 40241
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>emb|AL833804.16| Mouse DNA sequence from clone RP23-20A6 on chromosome 2, complete
              sequence
          Length = 200521

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 92     gcccctccctcctctcctcc 111
              ||||||||||||||||||||
Sbjct: 127767 gcccctccctcctctcctcc 127786
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>gb|AC140253.3| Mus musculus BAC clone RP23-298L2 from 3, complete sequence
          Length = 199167

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 92     gcccctccctcctctcctcc 111
              ||||||||||||||||||||
Sbjct: 159125 gcccctccctcctctcctcc 159144
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>emb|AL773540.18| Mouse DNA sequence from clone RP23-177L19 on chromosome 2, complete
              sequence
          Length = 217148

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 92     gcccctccctcctctcctcc 111
              ||||||||||||||||||||
Sbjct: 161530 gcccctccctcctctcctcc 161511
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>emb|CT009512.6| Mouse DNA sequence from clone RP23-94B13 on chromosome 14, complete
             sequence
          Length = 232468

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    gcccctccctcctctcctcc 111
             ||||||||||||||||||||
Sbjct: 74528 gcccctccctcctctcctcc 74509
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>emb|CT025528.10| Mouse DNA sequence from clone RP23-205O23 on chromosome 14, complete
             sequence
          Length = 224168

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    gcccctccctcctctcctcc 111
             ||||||||||||||||||||
Sbjct: 31134 gcccctccctcctctcctcc 31115
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>gb|AC161112.5| Mus musculus BAC clone RP24-468O24 from chromosome 12, complete sequence
          Length = 217434

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 92     gcccctccctcctctcctcc 111
              ||||||||||||||||||||
Sbjct: 151986 gcccctccctcctctcctcc 152005
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>emb|AL732450.5| Mouse DNA sequence from clone RP23-190H10 on chromosome X, complete
              sequence
          Length = 160831

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 92     gcccctccctcctctcctcc 111
              ||||||||||||||||||||
Sbjct: 143592 gcccctccctcctctcctcc 143573
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>emb|X66455.1|MMFGFR2 M.musculus promoter region of fibroblast growth factor receptor 2
           gene
          Length = 1374

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 2   ctcccctcgtcgccagccccgccgccgcagcc 33
           ||||||||| |||| || ||||||||||||||
Sbjct: 909 ctcccctcgccgcccgcgccgccgccgcagcc 878
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>gb|AC112935.24| Mus musculus chromosome 15, clone RP24-92L23, complete sequence
          Length = 183274

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 92    gcccctccctcctctcctcc 111
             ||||||||||||||||||||
Sbjct: 59690 gcccctccctcctctcctcc 59709
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>dbj|AP000467.1| Homo sapiens genomic DNA, chromosome 21q22.1, clone:B338L7, complete
             sequence
          Length = 47381

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 6     cctcgtcgccagccccgccgccgc 29
             |||||||||| |||||||||||||
Sbjct: 23057 cctcgtcgccggccccgccgccgc 23080


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,292,586
Number of Sequences: 3902068
Number of extensions: 3292586
Number of successful extensions: 79920
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79327
Number of HSP's gapped (non-prelim): 593
length of query: 425
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 403
effective length of database: 17,147,199,772
effective search space: 6910321508116
effective search space used: 6910321508116
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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