ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast50h10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|U49387.1|TAU49387 Triticum aestivum adenylosuccinate syntheta... 167 2e-38
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 60 3e-06
3gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare str... 60 3e-06
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 60 3e-06
5dbj|AK066881.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 3e-06
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.011
7dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.011
8ref|XM_612154.2| PREDICTED: Bos taurus similar to regulator of n... 46 0.044
9gb|AF051353.1| Acanthamoeba castellanii myosin IC heavy chain (M... 42 0.69
10ref|XM_507568.1| PREDICTED Oryza sativa (japonica cultivar-group... 42 0.69
11ref|XM_507127.2| PREDICTED Oryza sativa (japonica cultivar-group... 42 0.69
12ref|XM_480008.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.69
13ref|NM_197537.1| Oryza sativa (japonica cultivar-group) unknown ... 42 0.69
14ref|NM_192003.1| Oryza sativa (japonica cultivar-group), predic... 42 0.69
15ref|XM_474602.1| Oryza sativa (japonica cultivar-group), predic... 42 0.69
16ref|XM_870367.1| PREDICTED: Bos taurus similar to cleft lip and ... 42 0.69
17gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 1... 42 0.69
18ref|XM_540418.2| PREDICTED: Canis familiaris similar to Ezrin-ra... 42 0.69
19gb|BC004865.2| Homo sapiens cleft lip and palate associated tran... 42 0.69
20ref|XM_847485.1| PREDICTED: Canis familiaris similar to cleft li... 42 0.69
21ref|XM_860849.1| PREDICTED: Canis familiaris similar to cleft li... 42 0.69
22ref|XM_541570.2| PREDICTED: Canis familiaris similar to cleft li... 42 0.69
23gb|U19815.1|OCU19815 Oryctolagus cuniculus NHERF-1 mRNA, complet... 42 0.69
24emb|AL663013.4|OSJN00214 Oryza sativa genomic DNA, chromosome 4,... 42 0.69
25gb|AC092697.6| Oryza sativa chromosome 10 BAC OSJNBb0060I05 geno... 42 0.69
26gb|AE005831.1| Caulobacter crescentus CB15 section 157 of 359 of... 42 0.69
27dbj|AB169219.1| Macaca fascicularis testis cDNA, clone: QtsA-180... 42 0.69
28dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.69
29dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.69
30dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.69
31dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.69
32gb|AC011481.4|AC011481 Homo sapiens chromosome 19 clone CTB-129P... 42 0.69
33gb|AF279917.1|AF279917 Azospirillum brasilense ubiqinone synthas... 42 0.69
34dbj|AP003876.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.69
35dbj|AP003374.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.69
36dbj|AK109098.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.69
37dbj|AK105493.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.69
38dbj|AK104727.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.69
39dbj|AK099590.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.69
40dbj|AK061429.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.69
41gb|AF037338.1|AF037338 Homo sapiens cleft lip and palate transme... 42 0.69
42gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 0.69
43gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 0.69
44gb|AC149282.2| Mus musculus BAC clone RP23-236D19 from 7, comple... 42 0.69
45emb|AM113472.1| Micromonospora sp. ML1 thiocoraline gene cluster 42 0.69
46gb|J02974.1|ACAMYHCIB Myosin IB heavy chain gene, complete cds 42 0.69
47ref|XM_464722.1| Oryza sativa (japonica cultivar-group), mRNA 40 2.7
48ref|XM_466415.1| Oryza sativa (japonica cultivar-group), mRNA 40 2.7
49gb|AE009405.1| Agrobacterium tumefaciens str. C58 linear chromos... 40 2.7
50gb|AE008209.1| Agrobacterium tumefaciens str. C58 linear chromos... 40 2.7
51ref|NM_015379.3| Homo sapiens brain protein I3 (BRI3), mRNA 40 2.7
52gb|BC071992.1| Homo sapiens cDNA clone IMAGE:6209699, **** WARNI... 40 2.7
53emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete ... 40 2.7
54gb|AY955774.1| Schotia afra 18S ribosomal RNA gene, partial sequ... 40 2.7
55gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome 40 2.7
56gb|AF041430.2| Homo sapiens pRGR2 mRNA, complete cds 40 2.7
57gb|AC091654.4| Homo sapiens BAC clone RP11-177C9 from 7, complet... 40 2.7
58dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.7
59gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 2.7
60dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.7
61dbj|AP004779.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.7
62dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic D... 40 2.7
63dbj|AP005826.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.7
64gb|BC062370.1| Homo sapiens brain protein I3, mRNA (cDNA clone M... 40 2.7
65gb|BC018737.1| Homo sapiens brain protein I3, mRNA (cDNA clone M... 40 2.7
66gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 2.7
67gb|U97663.1|CRU97663 Chlamydomonas reinhardtii phosphatidylinosi... 40 2.7
68gb|AF010496.1|AF010496 Rhodobacter capsulatus strain SB1003, par... 40 2.7
69dbj|AB055977.1| Homo sapiens mRNA for I3 protein, complete cds 40 2.7 
>gb|U49387.1|TAU49387 Triticum aestivum adenylosuccinate synthetase mRNA, partial cds
          Length = 1741

 Score =  167 bits (84), Expect = 2e-38
 Identities = 99/104 (95%)
 Strand = Plus / Plus

                                                                       
Query: 109 ccccggcgccgtcgacggtgcgcctgtccaggagacgggtccccgcccccgccgccgcgt 168
           |||||||||||||| ||||||||||| || |||||| || ||||||||||||||||||||
Sbjct: 44  ccccggcgccgtcgtcggtgcgcctgcccgggagacaggcccccgcccccgccgccgcgt 103

                                                       
Query: 169 ccgcgctcgcggtggaggcggaccccgccgccgacagggtctcg 212
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 ccgcgctcgcggtggaggcggaccccgccgccgacagggtctcg 147
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                         
Query: 15      acctaaaaccctcgccccatgtcgctctccactctcaaccac 56
               ||||||||||||||  ||||||||||||||||| ||||||||
Sbjct: 3971670 acctaaaaccctcgagccatgtcgctctccactgtcaaccac 3971629
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>gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0061L19, from chromosome 3, complete sequence
          Length = 153322

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                        
Query: 15     acctaaaaccctcgccccatgtcgctctccactctcaaccac 56
              ||||||||||||||  ||||||||||||||||| ||||||||
Sbjct: 127698 acctaaaaccctcgagccatgtcgctctccactgtcaaccac 127739
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                         
Query: 15      acctaaaaccctcgccccatgtcgctctccactctcaaccac 56
               ||||||||||||||  ||||||||||||||||| ||||||||
Sbjct: 3971781 acctaaaaccctcgagccatgtcgctctccactgtcaaccac 3971740
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>dbj|AK066881.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088J03,
          full insert sequence
          Length = 1662

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                    
Query: 15 acctaaaaccctcgccccatgtcgctctccactctcaaccac 56
          ||||||||||||||  ||||||||||||||||| ||||||||
Sbjct: 2  acctaaaaccctcgagccatgtcgctctccactgtcaaccac 43
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                           
Query: 149     ccccgcccccgccgccgcgtccgcgctc 176
               ||||||| ||||||||||||||||||||
Sbjct: 9180791 ccccgccgccgccgccgcgtccgcgctc 9180764



 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 183      gaggcggaccccgccgccgac 203
                |||||||||||||||||||||
Sbjct: 27775397 gaggcggaccccgccgccgac 27775377
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>dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0011D01
          Length = 168655

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 149   ccccgcccccgccgccgcgtccgcgctc 176
             ||||||| ||||||||||||||||||||
Sbjct: 81173 ccccgccgccgccgccgcgtccgcgctc 81146
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>ref|XM_612154.2| PREDICTED: Bos taurus similar to regulator of nonsense transcripts
           1 (LOC532933), mRNA
          Length = 3595

 Score = 46.1 bits (23), Expect = 0.044
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 144 cgggtccccgcccccgccgccgcgtccgcgc 174
           |||||| ||||| ||||||||||||||||||
Sbjct: 65  cgggtcgccgccgccgccgccgcgtccgcgc 35
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>gb|AF051353.1| Acanthamoeba castellanii myosin IC heavy chain (MICHC) mRNA, complete
            cds
          Length = 3561

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 154  cccccgccgccgcgtccgcgc 174
            |||||||||||||||||||||
Sbjct: 2960 cccccgccgccgcgtccgcgc 2980
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>ref|XM_507568.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1119_D01.18
           mRNA
          Length = 1206

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 147 gtccccgcccccgccgccgcg 167
           |||||||||||||||||||||
Sbjct: 248 gtccccgcccccgccgccgcg 228
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>ref|XM_507127.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1119_D01.18
           mRNA
          Length = 1200

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 147 gtccccgcccccgccgccgcg 167
           |||||||||||||||||||||
Sbjct: 241 gtccccgcccccgccgccgcg 221
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>ref|XM_480008.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1200

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 147 gtccccgcccccgccgccgcg 167
           |||||||||||||||||||||
Sbjct: 241 gtccccgcccccgccgccgcg 221
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>ref|NM_197537.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNBb0060I05.1), mRNA
          Length = 950

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 147 gtccccgcccccgccgccgcg 167
           |||||||||||||||||||||
Sbjct: 240 gtccccgcccccgccgccgcg 220
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>ref|NM_192003.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 873

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 183 gaggcggaccccgccgccgac 203
           |||||||||||||||||||||
Sbjct: 22  gaggcggaccccgccgccgac 42
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>ref|XM_474602.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1455

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 147 gtccccgcccccgccgccgcgtccg 171
           ||||||||| |||||||||||||||
Sbjct: 100 gtccccgccgccgccgccgcgtccg 124
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>ref|XM_870367.1| PREDICTED: Bos taurus similar to cleft lip and palate associated
           transmembrane protein 1 (LOC618037), mRNA
          Length = 1538

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 144 cgggtccccgcccccgccgcc 164
           |||||||||||||||||||||
Sbjct: 37  cgggtccccgcccccgccgcc 17
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>gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBa0059J06,
              complete sequence
          Length = 185449

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 149    ccccgcccccgccgccgcgtc 169
              |||||||||||||||||||||
Sbjct: 138229 ccccgcccccgccgccgcgtc 138249
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>ref|XM_540418.2| PREDICTED: Canis familiaris similar to Ezrin-radixin-moesin binding
           phosphoprotein 50 (EBP50) (Na(+)/H(+) exchange
           regulatory cofactor NHE-RF) (NHERF-1) (Regulatory
           cofactor of Na(+)/H(+) exchanger) (Sodium-hydrogen
           exchanger regulatory factor 1) (Solute carrier family 9
           isof... (LOC483299), mRNA
          Length = 1515

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 152 cgcccccgccgccgcgtccgcgctc 176
           ||||||||| |||||||||||||||
Sbjct: 441 cgcccccgcggccgcgtccgcgctc 417
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>gb|BC004865.2| Homo sapiens cleft lip and palate associated transmembrane protein
           1, mRNA (cDNA clone MGC:10593 IMAGE:3840991), complete
           cds
          Length = 2308

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 144 cgggtccccgcccccgccgcc 164
           |||||||||||||||||||||
Sbjct: 41  cgggtccccgcccccgccgcc 21
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>ref|XM_847485.1| PREDICTED: Canis familiaris similar to cleft lip and palate
           associated transmembrane protein 1, transcript variant 2
           (LOC484455), mRNA
          Length = 2124

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 144 cgggtccccgcccccgccgcc 164
           |||||||||||||||||||||
Sbjct: 35  cgggtccccgcccccgccgcc 15
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>ref|XM_860849.1| PREDICTED: Canis familiaris similar to cleft lip and palate
           associated transmembrane protein 1, transcript variant 4
           (LOC484455), mRNA
          Length = 1652

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 144 cgggtccccgcccccgccgcc 164
           |||||||||||||||||||||
Sbjct: 35  cgggtccccgcccccgccgcc 15
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>ref|XM_541570.2| PREDICTED: Canis familiaris similar to cleft lip and palate
           associated transmembrane protein 1, transcript variant 1
           (LOC484455), mRNA
          Length = 2513

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 144 cgggtccccgcccccgccgcc 164
           |||||||||||||||||||||
Sbjct: 35  cgggtccccgcccccgccgcc 15
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>gb|U19815.1|OCU19815 Oryctolagus cuniculus NHERF-1 mRNA, complete cds
          Length = 1895

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 152 cgcccccgccgccgcgtccgcgctc 176
           |||||| ||||||||||||||||||
Sbjct: 234 cgccccggccgccgcgtccgcgctc 210
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>emb|AL663013.4|OSJN00214 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089K06,
             complete sequence
          Length = 129608

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 147   gtccccgcccccgccgccgcgtccg 171
             ||||||||| |||||||||||||||
Sbjct: 12747 gtccccgccgccgccgccgcgtccg 12723
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>gb|AC092697.6| Oryza sativa chromosome 10 BAC OSJNBb0060I05 genomic sequence, complete
             sequence
          Length = 105841

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 147   gtccccgcccccgccgccgcg 167
             |||||||||||||||||||||
Sbjct: 34978 gtccccgcccccgccgccgcg 34998
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>gb|AE005831.1| Caulobacter crescentus CB15 section 157 of 359 of the complete genome
          Length = 13304

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 158  cgccgccgcgtccgcgctcgc 178
            |||||||||||||||||||||
Sbjct: 1570 cgccgccgcgtccgcgctcgc 1590
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>dbj|AB169219.1| Macaca fascicularis testis cDNA, clone: QtsA-18078, similar to
           human solute carrier family 9 (sodium/hydrogen
           exchanger),isoform 3 regulatory factor 1 (SLC9A3R1),
           mRNA, RefSeq: NM_004252.1
          Length = 2014

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 152 cgcccccgccgccgcgtccgcgctc 176
           |||||| ||||||||||||||||||
Sbjct: 246 cgccccagccgccgcgtccgcgctc 222
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 147     gtccccgcccccgccgccgcgtccg 171
               ||||||||| |||||||||||||||
Sbjct: 4622614 gtccccgccgccgccgccgcgtccg 4622590
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 149     ccccgcccccgccgccgcgtc 169
               |||||||||||||||||||||
Sbjct: 2066674 ccccgcccccgccgccgcgtc 2066694
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 147      gtccccgcccccgccgccgcg 167
                |||||||||||||||||||||
Sbjct: 20319476 gtccccgcccccgccgccgcg 20319496
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 147     gtccccgcccccgccgccgcg 167
               |||||||||||||||||||||
Sbjct: 2173589 gtccccgcccccgccgccgcg 2173609
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>gb|AC011481.4|AC011481 Homo sapiens chromosome 19 clone CTB-129P6, complete sequence
          Length = 107567

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 144   cgggtccccgcccccgccgcc 164
             |||||||||||||||||||||
Sbjct: 98209 cgggtccccgcccccgccgcc 98189
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>gb|AF279917.1|AF279917 Azospirillum brasilense ubiqinone synthase (ubiH) gene, partial cds;
            pZ protein (glnZ) and aspartate aminotransferase (aat)
            genes, complete cds; and peptidoglycan synthase (ftsK)
            gene, partial cds
          Length = 3672

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 144  cgggtccccgcccccgccgcc 164
            |||||||||||||||||||||
Sbjct: 3531 cgggtccccgcccccgccgcc 3511
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>dbj|AP003876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1119_D01
          Length = 97862

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 147   gtccccgcccccgccgccgcg 167
             |||||||||||||||||||||
Sbjct: 51851 gtccccgcccccgccgccgcg 51871
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>dbj|AP003374.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1117_G01
          Length = 125454

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 183   gaggcggaccccgccgccgac 203
             |||||||||||||||||||||
Sbjct: 67452 gaggcggaccccgccgccgac 67432
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>dbj|AK109098.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-A11, full
           insert sequence
          Length = 967

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 147 gtccccgcccccgccgccgcg 167
           |||||||||||||||||||||
Sbjct: 262 gtccccgcccccgccgccgcg 242
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>dbj|AK105493.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-C03, full
           insert sequence
          Length = 1319

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 183 gaggcggaccccgccgccgac 203
           |||||||||||||||||||||
Sbjct: 128 gaggcggaccccgccgccgac 148
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>dbj|AK104727.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-B10, full
           insert sequence
          Length = 1200

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 147 gtccccgcccccgccgccgcg 167
           |||||||||||||||||||||
Sbjct: 241 gtccccgcccccgccgccgcg 221
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>dbj|AK099590.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043H11, full
           insert sequence
          Length = 1206

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 147 gtccccgcccccgccgccgcg 167
           |||||||||||||||||||||
Sbjct: 248 gtccccgcccccgccgccgcg 228
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>dbj|AK061429.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-H03, full
           insert sequence
          Length = 1200

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 147 gtccccgcccccgccgccgcg 167
           |||||||||||||||||||||
Sbjct: 241 gtccccgcccccgccgccgcg 221
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>gb|AF037338.1|AF037338 Homo sapiens cleft lip and palate transmembrane protein 1 (CLPTM1)
           gene, complete cds
          Length = 39108

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 144 cgggtccccgcccccgccgcc 164
           |||||||||||||||||||||
Sbjct: 964 cgggtccccgcccccgccgcc 944
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 147      gtccccgcccccgccgccgcg 167
                |||||||||||||||||||||
Sbjct: 20330748 gtccccgcccccgccgccgcg 20330768
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 149     ccccgcccccgccgccgcgtc 169
               |||||||||||||||||||||
Sbjct: 2074455 ccccgcccccgccgccgcgtc 2074475
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>gb|AC149282.2| Mus musculus BAC clone RP23-236D19 from 7, complete sequence
          Length = 221553

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 144   cgggtccccgcccccgccgcc 164
             |||||||||||||||||||||
Sbjct: 70337 cgggtccccgcccccgccgcc 70357
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>emb|AM113472.1| Micromonospora sp. ML1 thiocoraline gene cluster
          Length = 64650

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 172   cgctcgcggtggaggcggaccccgccgcc 200
             |||||||||||||||||| ||| ||||||
Sbjct: 43959 cgctcgcggtggaggcggtcccggccgcc 43987
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>gb|J02974.1|ACAMYHCIB Myosin IB heavy chain gene, complete cds
          Length = 6504

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 154  cccccgccgccgcgtccgcgc 174
            |||||||||||||||||||||
Sbjct: 5460 cccccgccgccgcgtccgcgc 5480
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>ref|XM_464722.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 699

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 147 gtccccgcccccgccgccgc 166
           ||||||||||||||||||||
Sbjct: 155 gtccccgcccccgccgccgc 136
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>ref|XM_466415.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 678

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 149 ccccgcccccgccgccgcgtccgc 172
           ||||||| ||||||||||||||||
Sbjct: 129 ccccgccgccgccgccgcgtccgc 106
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>gb|AE009405.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 175 of
            187 of the complete sequence
          Length = 11476

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 171  gcgctcgcggtggaggcgga 190
            ||||||||||||||||||||
Sbjct: 8637 gcgctcgcggtggaggcgga 8618
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>gb|AE008209.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 13 of
           187 of the complete sequence
          Length = 11160

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 171 gcgctcgcggtggaggcgga 190
           ||||||||||||||||||||
Sbjct: 909 gcgctcgcggtggaggcgga 928
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>ref|NM_015379.3| Homo sapiens brain protein I3 (BRI3), mRNA
          Length = 798

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 147 gtccccgcccccgccgccgcgtcc 170
           ||||||||| ||||||||||||||
Sbjct: 41  gtccccgccgccgccgccgcgtcc 64
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>gb|BC071992.1| Homo sapiens cDNA clone IMAGE:6209699, **** WARNING: chimeric clone
           ****
          Length = 1335

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 147 gtccccgcccccgccgccgcgtcc 170
           ||||||||| ||||||||||||||
Sbjct: 13  gtccccgccgccgccgccgcgtcc 36
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>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29
          Length = 311000

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 147    gtccccgcccccgccgccgc 166
              ||||||||||||||||||||
Sbjct: 193922 gtccccgcccccgccgccgc 193903
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>gb|AY955774.1| Schotia afra 18S ribosomal RNA gene, partial sequence; internal
           transcribed spacer 1, 5.8S ribosomal RNA gene, and
           internal transcribed spacer 2, complete sequence; and
           26S ribosomal RNA gene, partial sequence
          Length = 818

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 149 ccccgcccccgccgccgcgt 168
           ||||||||||||||||||||
Sbjct: 569 ccccgcccccgccgccgcgt 550
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>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome
          Length = 230138

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 111    ccggcgccgtcgacggtgcg 130
              ||||||||||||||||||||
Sbjct: 154601 ccggcgccgtcgacggtgcg 154620
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>gb|AF041430.2| Homo sapiens pRGR2 mRNA, complete cds
          Length = 758

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 147 gtccccgcccccgccgccgcgtcc 170
           ||||||||| ||||||||||||||
Sbjct: 18  gtccccgccgccgccgccgcgtcc 41
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>gb|AC091654.4| Homo sapiens BAC clone RP11-177C9 from 7, complete sequence
          Length = 116507

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 147    gtccccgcccccgccgccgcgtcc 170
              ||||||||| ||||||||||||||
Sbjct: 106246 gtccccgccgccgccgccgcgtcc 106269
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 149      ccccgcccccgccgccgcgtccgc 172
                ||||||| ||||||||||||||||
Sbjct: 22254587 ccccgccgccgccgccgcgtccgc 22254610



 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 147     gtccccgcccccgccgccgc 166
               ||||||||||||||||||||
Sbjct: 6914716 gtccccgcccccgccgccgc 6914697
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 169     ccgcgctcgcggtggaggcggaccccgc 196
               |||||||||||| |||||||||| ||||
Sbjct: 3810846 ccgcgctcgcggcggaggcggacgccgc 3810819



 Score = 40.1 bits (20), Expect = 2.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 151     ccgcccccgccgccgcgtccgcgctcgc 178
               |||| |||||||||||| ||||||||||
Sbjct: 3095259 ccgcgcccgccgccgcggccgcgctcgc 3095232
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>dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1267B06
          Length = 156989

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 149   ccccgcccccgccgccgcgtccgc 172
             ||||||| ||||||||||||||||
Sbjct: 13231 ccccgccgccgccgccgcgtccgc 13254
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>dbj|AP004779.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0470A03
          Length = 133167

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 147  gtccccgcccccgccgccgc 166
            ||||||||||||||||||||
Sbjct: 8338 gtccccgcccccgccgccgc 8319
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>dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:B1342F01
          Length = 153287

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 149    ccccgcccccgccgccgcgtccgc 172
              ||||||| ||||||||||||||||
Sbjct: 150431 ccccgccgccgccgccgcgtccgc 150454
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>dbj|AP005826.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0758B01
          Length = 159206

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 147    gtccccgcccccgccgccgc 166
              ||||||||||||||||||||
Sbjct: 132442 gtccccgcccccgccgccgc 132423
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>gb|BC062370.1| Homo sapiens brain protein I3, mRNA (cDNA clone MGC:71215
           IMAGE:6598528), complete cds
          Length = 766

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 147 gtccccgcccccgccgccgcgtcc 170
           ||||||||| ||||||||||||||
Sbjct: 13  gtccccgccgccgccgccgcgtcc 36
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>gb|BC018737.1| Homo sapiens brain protein I3, mRNA (cDNA clone MGC:31865
           IMAGE:4875257), complete cds
          Length = 731

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 147 gtccccgcccccgccgccgcgtcc 170
           ||||||||| ||||||||||||||
Sbjct: 41  gtccccgccgccgccgccgcgtcc 64
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 161     cgccgcgtccgcgctcgcgg 180
               ||||||||||||||||||||
Sbjct: 1498615 cgccgcgtccgcgctcgcgg 1498634
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>gb|U97663.1|CRU97663 Chlamydomonas reinhardtii phosphatidylinositol 3-kinase gene, partial
            cds
          Length = 4877

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 149  ccccgcccccgccgccgcgtccgc 172
            ||||||||||||||||||| ||||
Sbjct: 4212 ccccgcccccgccgccgcgcccgc 4189
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>gb|AF010496.1|AF010496 Rhodobacter capsulatus strain SB1003, partial genome
          Length = 189370

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 149    ccccgcccccgccgccgcgtccgc 172
              ||||||||||||||||||| ||||
Sbjct: 168977 ccccgcccccgccgccgcgcccgc 169000
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>dbj|AB055977.1| Homo sapiens mRNA for I3 protein, complete cds
          Length = 709

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 147 gtccccgcccccgccgccgcgtcc 170
           ||||||||| ||||||||||||||
Sbjct: 41  gtccccgccgccgccgccgcgtcc 64


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,351,870
Number of Sequences: 3902068
Number of extensions: 1351870
Number of successful extensions: 129530
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 126571
Number of HSP's gapped (non-prelim): 2959
length of query: 215
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 193
effective length of database: 17,147,199,772
effective search space: 3309409555996
effective search space used: 3309409555996
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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