ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast50h02 |
|---|---|
| Clone Library Name | barley_pub |
>SY111_ARATH (Q42374) Syntaxin-related protein KNOLLE (Syntaxin-111) (AtSYP111)| Length = 310 Score = 89.7 bits (221), Expect = 1e-18 Identities = 46/89 (51%), Positives = 60/89 (67%) Frame = +2 Query: 128 MNDLMTKSFMSYVDLKKAAMKDLEAGGANDETELSQVGGATDERLQGFFKEAEAVREEMA 307 MNDLMTKSFMSYVDLKKAAMKD+EAG D S DE L F +EAE V+ EM Sbjct: 1 MNDLMTKSFMSYVDLKKAAMKDMEAGPDFDLEMASTKADKMDENLSSFLEEAEYVKAEMG 60 Query: 308 AIRDALARLHAANEEGKSLHQPDALRAMR 394 I + LAR+ +EE K +H+ ++++++R Sbjct: 61 LISETLARIEQYHEESKGVHKAESVKSLR 89
>SY112_ARATH (Q9ZPV9) Putative syntaxin-112 (AtSYP112)| Length = 285 Score = 65.9 bits (159), Expect = 2e-11 Identities = 39/91 (42%), Positives = 51/91 (56%), Gaps = 2/91 (2%) Frame = +2 Query: 128 MNDLMTKSFMSYVDLKKAAMKDLEAGGANDETE--LSQVGGATDERLQGFFKEAEAVREE 301 MNDLMTKSF+SYV+LKK A D+E+ ++ E A +E L GFF+E E ++ Sbjct: 1 MNDLMTKSFLSYVELKKQARTDMESDRDLEKGEDFNFDFSPADEENLSGFFQEIETIKTL 60 Query: 302 MAAIRDALARLHAANEEGKSLHQPDALRAMR 394 + I L L NEE KS H LR +R Sbjct: 61 IEEITHLLLDLQNLNEETKSTHSTKILRGLR 91
>SY123_ARATH (Q9ZQZ8) Syntaxin-123 (AtSYP123)| Length = 305 Score = 50.1 bits (118), Expect = 1e-06 Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 1/90 (1%) Frame = +2 Query: 128 MNDLMTKSFMSYVDLK-KAAMKDLEAGGANDETELSQVGGATDERLQGFFKEAEAVREEM 304 MNDL++ SF Y DL + + D+E+ +S G DE FF E+V+E+M Sbjct: 1 MNDLISSSFKRYTDLNHQVQLDDIES------QNVSLDSGNLDE----FFGYVESVKEDM 50 Query: 305 AAIRDALARLHAANEEGKSLHQPDALRAMR 394 A+ + RL ANEE K++H A++ +R Sbjct: 51 KAVDEIHKRLQDANEESKTVHDSKAVKKLR 80
>SY124_ARATH (O64791) Putative syntaxin-124 (AtSYP124)| Length = 303 Score = 46.2 bits (108), Expect = 2e-05 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 1/90 (1%) Frame = +2 Query: 128 MNDLMTKSFMSYVDLKKAA-MKDLEAGGANDETELSQVGGATDERLQGFFKEAEAVREEM 304 MNDL + SF Y DLK+ A M D+E+G ET L FF++ E V++ M Sbjct: 1 MNDLFSSSFKKYTDLKQQAQMDDIESG---KETM----------NLDKFFEDVENVKDNM 47 Query: 305 AAIRDALARLHAANEEGKSLHQPDALRAMR 394 + L +NEE K++H ++ +R Sbjct: 48 KGVETLYKSLQDSNEECKTVHNAKKVKELR 77
>SY121_ARATH (Q9ZSD4) Syntaxin-121 (AtSYP121) (Syntaxin-related protein At-Syr1)| Length = 346 Score = 45.8 bits (107), Expect = 2e-05 Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 1/90 (1%) Frame = +2 Query: 128 MNDLMTKSFMSYVDLKKAAMKDLEAGGANDETELSQVGGATDE-RLQGFFKEAEAVREEM 304 MNDL + SF + + + +D+ GG D +++ G+T L FF++ E+V+EE+ Sbjct: 1 MNDLFSSSFSRFRSGEPSPRRDVAGGG--DGVQMANPAGSTGGVNLDKFFEDVESVKEEL 58 Query: 305 AAIRDALARLHAANEEGKSLHQPDALRAMR 394 + L + +E+ K+LH A++ +R Sbjct: 59 KELDRLNETLSSCHEQSKTLHNAKAVKDLR 88
>SY125_ARATH (Q9SXB0) Putative syntaxin-125 (AtSYP125)| Length = 298 Score = 37.7 bits (86), Expect = 0.007 Identities = 26/89 (29%), Positives = 43/89 (48%) Frame = +2 Query: 128 MNDLMTKSFMSYVDLKKAAMKDLEAGGANDETELSQVGGATDERLQGFFKEAEAVREEMA 307 MNDL + SF +A + D+EAG ET L FF++ E V+++M Sbjct: 1 MNDLFSNSFKK----NQAQLGDVEAG---QETM----------NLDKFFEDVENVKDDMK 43 Query: 308 AIRDALARLHAANEEGKSLHQPDALRAMR 394 + +L +NEE K++H ++ +R Sbjct: 44 GVEALYKKLQDSNEECKTVHNAKKVKELR 72
>SY122_ARATH (Q9SVC2) Syntaxin-122 (AtSYP122) (Synt4)| Length = 341 Score = 36.6 bits (83), Expect = 0.015 Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 3/92 (3%) Frame = +2 Query: 128 MNDLMTKSFMSYVDLKKAAMKDLEAGGANDETELSQVGGAT---DERLQGFFKEAEAVRE 298 MNDL++ SF + V A N E ++V G + L FF + E V E Sbjct: 1 MNDLLSGSFKTSV-----ADGSSPPHSHNIEMSKAKVSGGSCHGGNNLDTFFLDVEVVNE 55 Query: 299 EMAAIRDALARLHAANEEGKSLHQPDALRAMR 394 ++ + L ++NE+ K+LH +A++ ++ Sbjct: 56 DLKELDRLCHNLRSSNEQSKTLHNANAVKELK 87
>SY131_ARATH (Q9SRV7) Putative syntaxin-131 (AtSYP131)| Length = 306 Score = 34.3 bits (77), Expect = 0.073 Identities = 23/89 (25%), Positives = 45/89 (50%) Frame = +2 Query: 128 MNDLMTKSFMSYVDLKKAAMKDLEAGGANDETELSQVGGATDERLQGFFKEAEAVREEMA 307 MNDL+ S D ++ D+E+G G + D L GFFK+ + + ++ Sbjct: 1 MNDLLKGSLEFSRD--RSNRSDIESGHGP--------GNSGDLGLSGFFKKVQEIEKQYE 50 Query: 308 AIRDALARLHAANEEGKSLHQPDALRAMR 394 + L +L A+EE K++ + A+++++ Sbjct: 51 KLDKHLNKLQGAHEETKAVTKAPAMKSIK 79
>MBEB_ECOLI (P13659) Mobilization protein mbeB| Length = 172 Score = 33.1 bits (74), Expect = 0.16 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 5/74 (6%) Frame = +2 Query: 185 MKDLEAGGANDETELSQVGGATDERLQGFFKE-----AEAVREEMAAIRDALARLHAANE 349 M +L GA E +L + +T++ L F+ +EAV IRDA+A A+ E Sbjct: 1 MSNLLQTGAEFEKKLKERAESTEKMLNNEFRRLGESVSEAVTSNETKIRDAIALFTASTE 60 Query: 350 EGKSLHQPDALRAM 391 E H+ AM Sbjct: 61 ESLEKHREGVKEAM 74
>FDHE_RHIME (Q931D7) Protein fdhE homolog| Length = 306 Score = 32.3 bits (72), Expect = 0.28 Identities = 20/41 (48%), Positives = 30/41 (73%), Gaps = 2/41 (4%) Frame = +2 Query: 236 VGGATD--ERLQGFFKEAEAVREEMAAIRDALARLHAANEE 352 +GG+ D E LQ FF++AEA+ E+ AA +ALA++ A+EE Sbjct: 95 MGGSPDCREVLQQFFEKAEAL-EKPAAAAEALAQVRTADEE 134
>MRCKA_HUMAN (Q5VT25) Serine/threonine-protein kinase MRCK alpha (EC 2.7.11.1)| (CDC42-binding protein kinase alpha) (Myotonic dystrophy kinase-related CDC42-binding kinase alpha) (Myotonic dystrophy protein kinase-like alpha) (MRCK alpha) (DMPK-like alpha Length = 1732 Score = 30.8 bits (68), Expect = 0.81 Identities = 23/71 (32%), Positives = 34/71 (47%) Frame = +2 Query: 158 SYVDLKKAAMKDLEAGGANDETELSQVGGATDERLQGFFKEAEAVREEMAAIRDALARLH 337 S VD A KDLE +E E + L+ +EA AVR+E + DA ++ Sbjct: 475 STVDGPLTASKDLEIKNLKEEIEKLRKQVTESSHLEQQLEEANAVRQE---LDDAFRQIK 531 Query: 338 AANEEGKSLHQ 370 A ++ K+L Q Sbjct: 532 AYEKQIKTLQQ 542
>DNAK_EHRRW (Q5HAY1) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 645 Score = 30.0 bits (66), Expect = 1.4 Identities = 13/35 (37%), Positives = 18/35 (51%) Frame = +2 Query: 197 EAGGANDETELSQVGGATDERLQGFFKEAEAVREE 301 +A G + GG TD+ +Q KEAE+ EE Sbjct: 489 KASGKEQAIRIQSSGGLTDDEIQNMIKEAESKAEE 523
>DNAK_EHRRG (Q5FFM4) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 645 Score = 30.0 bits (66), Expect = 1.4 Identities = 13/35 (37%), Positives = 18/35 (51%) Frame = +2 Query: 197 EAGGANDETELSQVGGATDERLQGFFKEAEAVREE 301 +A G + GG TD+ +Q KEAE+ EE Sbjct: 489 KASGKEQAIRIQSSGGLTDDEIQNMIKEAESKAEE 523
>EP15R_HUMAN (Q9UBC2) Epidermal growth factor receptor substrate 15-like 1| (Eps15-related protein) (Eps15R) Length = 864 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Frame = +2 Query: 215 DETELSQVGGATDERLQGFFKEAEAVREEMAAIRDALARLHAANEEG-KSLHQPD 376 +ET+L Q A +L+ K ++ ++E+ R L++LH + +E +SL Q D Sbjct: 511 EETQLEQSIQAGRVQLETIIKSLKSTQDEINQARSKLSQLHESRQEAHRSLEQYD 565
>STX2_MOUSE (Q00262) Syntaxin-2 (Epimorphin)| Length = 289 Score = 28.9 bits (63), Expect = 3.1 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 8/66 (12%) Frame = +2 Query: 185 MKDLEAGGANDETELSQVGGATDERLQGFFKEAEAVREEMAAI--------RDALARLHA 340 + DL A ND+ + + V D + GFF + E +R +A I ++ L A Sbjct: 5 LPDLTACRTNDDGDTAVVIVEKDHFMDGFFHQVEEIRSSIARIAQHVEDVKKNHSIILSA 64 Query: 341 ANEEGK 358 N EGK Sbjct: 65 PNPEGK 70
>RL1_CHRVO (Q7NQE3) 50S ribosomal protein L1| Length = 231 Score = 28.9 bits (63), Expect = 3.1 Identities = 20/58 (34%), Positives = 31/58 (53%) Frame = +2 Query: 182 AMKDLEAGGANDETELSQVGGATDERLQGFFKEAEAVREEMAAIRDALARLHAANEEG 355 A+K+ +AG T+ + + AT R EAEA+RE +A+ DAL + A +G Sbjct: 152 AVKNAKAGQVQYRTDKAGIIHATIGRASF---EAEALRENFSALVDALVKAKPAASKG 206
>PCNT_HUMAN (O95613) Pericentrin (Pericentrin B) (Kendrin)| Length = 3336 Score = 28.9 bits (63), Expect = 3.1 Identities = 22/59 (37%), Positives = 28/59 (47%) Frame = +2 Query: 185 MKDLEAGGANDETELSQVGGATDERLQGFFKEAEAVREEMAAIRDALARLHAANEEGKS 361 + D +AG E SQ GG + LQG E EA E ++AL+RL A E S Sbjct: 1763 VSDSQAGSLQSELLCSQAGGPRGQALQG---ELEAALE----AKEALSRLLADQERRHS 1814
>GIDA_LEGPA (Q5X0Z8) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 624 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = +2 Query: 233 QVGGATDERLQGFFKEAEAVREEMAAIRDALARLH 337 Q+G DER + F K+ EA+ A + ++ R+H Sbjct: 454 QLGLVGDERWESFSKKREAIESTQALLHNSWVRVH 488
>ATG17_YARLI (Q6C0L6) Autophagy-related protein 17| Length = 408 Score = 27.7 bits (60), Expect = 6.9 Identities = 20/66 (30%), Positives = 33/66 (50%) Frame = +2 Query: 167 DLKKAAMKDLEAGGANDETELSQVGGATDERLQGFFKEAEAVREEMAAIRDALARLHAAN 346 D+ + K+ E A ++TEL + +D + AEA E+MA + +LAR + Sbjct: 153 DIVNRSKKEFEREKA-EQTELL-IHQTSDSGIYDLLNSAEACSEDMANLLQSLARHYDLC 210 Query: 347 EEGKSL 364 E G+ L Sbjct: 211 ERGQDL 216
>STYE_STYCL (O18496) Styelin-E precursor| Length = 81 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +2 Query: 236 VGGATDERLQGFFKEAEAVREE 301 +G TDE Q F KE E REE Sbjct: 54 LGDMTDEEFQDFMKEVEQAREE 75
>STYD_STYCL (O18495) Styelin-D precursor| Length = 81 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +2 Query: 236 VGGATDERLQGFFKEAEAVREE 301 +G TDE Q F KE E REE Sbjct: 54 LGDMTDEEFQDFMKEVEQAREE 75
>HXK1_SOLTU (O64390) Hexokinase-1 (EC 2.7.1.1)| Length = 498 Score = 27.7 bits (60), Expect = 6.9 Identities = 26/87 (29%), Positives = 33/87 (37%), Gaps = 8/87 (9%) Frame = +2 Query: 137 LMTKSFMSYVDLKKAAMKDLEAGGANDETELSQVGGATDERLQGFFKEAEAVREEMAAIR 316 L S +S + +K L+ GG N Q+GG + F EA M Sbjct: 81 LSPMSIISQLVMKLGVFYALDLGGTNFRVLRVQLGGKDGGIIHQEFAEASIPPSLMVGTS 140 Query: 317 DA--------LARLHAANEEGKSLHQP 373 DA LA+ AA EE HQP Sbjct: 141 DALFDYIAAELAKFVAAEEE--KFHQP 165
>SPAA_STRDO (P21979) Cell surface antigen I/II precursor| Length = 1528 Score = 27.7 bits (60), Expect = 6.9 Identities = 23/85 (27%), Positives = 40/85 (47%) Frame = +2 Query: 125 AMNDLMTKSFMSYVDLKKAAMKDLEAGGANDETELSQVGGATDERLQGFFKEAEAVREEM 304 A N +T++ + + A D E + + EL+Q + L + + +A ++E Sbjct: 437 AKNAEITEANRAIRERNAKAKTDYELKLSKYQEELAQY----KKDLAEYPAKLQAYQDEQ 492 Query: 305 AAIRDALARLHAANEEGKSLHQPDA 379 AAI+ ALA L E +L +P A Sbjct: 493 AAIKAALAELEKHKNEDGNLSEPSA 517
>LIPS_MOUSE (P54310) Hormone-sensitive lipase (EC 3.1.1.79) (HSL)| Length = 759 Score = 27.7 bits (60), Expect = 6.9 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 8/70 (11%) Frame = +2 Query: 170 LKKAAMKDLEAGGANDETELSQ----VGGATDERLQGFFK----EAEAVREEMAAIRDAL 325 LKK +KDL +D E+SQ +G +T + F + + EA ++ D + Sbjct: 575 LKKLTIKDLSNSEPSDSPEMSQSMETLGPSTPSDVNFFLRPGNSQEEAEAKDEVRPMDGV 634 Query: 326 ARLHAANEEG 355 R+ AA EG Sbjct: 635 PRVRAAFPEG 644
>DNAK_PELUB (Q4FNP9) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 647 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/40 (30%), Positives = 23/40 (57%) Frame = +2 Query: 206 GANDETELSQVGGATDERLQGFFKEAEAVREEMAAIRDAL 325 G + ++ GG +DE ++ K+AEA +EE R+++ Sbjct: 489 GKEQKIQIQASGGLSDEEIEKMVKDAEANKEEDKKKRESV 528
>LIN12_CAEEL (P14585) Protein lin-12 precursor (Abnormal cell lineage protein| 12) Length = 1429 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/17 (64%), Positives = 13/17 (76%) Frame = -3 Query: 63 PGAMRMDGCARRFGGRW 13 PG+ R D CAR FGG+W Sbjct: 385 PGSFRCD-CARGFGGKW 400
>GIDA_LEGPL (Q5WSS4) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 624 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = +2 Query: 233 QVGGATDERLQGFFKEAEAVREEMAAIRDALARLH 337 Q+G DER F K+ EA+ A + ++ R+H Sbjct: 454 QLGLVGDERWDSFSKKREAIESTQALLHNSWVRVH 488 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.308 0.133 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,802,136 Number of Sequences: 219361 Number of extensions: 378932 Number of successful extensions: 1648 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 1611 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1643 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 1365190992 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.6 bits)
