>gb|BT016792.1| Zea mays clone Contig625 mRNA sequence
          Length = 1862

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 277 ttccgcttggtccaccgggatgacttctccgtgaacgccagcgagggcgagctgct 332
           |||||| |||||||||||||   |||| | |||||||||| || ||||||||||||
Sbjct: 209 ttccgcgtggtccaccgggacaccttcgcggtgaacgccaccgcgggcgagctgct 264

>gb|AC119884.13| Mus musculus chromosome 15, clone RP24-213O5, complete sequence
          Length = 168400

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 139    cagactcaggccctccttgccaccc 163
              |||||||||||||||||| ||||||
Sbjct: 101097 cagactcaggccctccttcccaccc 101121

>gb|AC113945.26| Mus musculus chromosome 3, clone RP24-96D10, complete sequence
          Length = 144239

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 80    ccctctccgcgctcctcctcc 100
             |||||||||||||||||||||
Sbjct: 49546 ccctctccgcgctcctcctcc 49566

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 305     ccgtgaacgccagcgagggcg 325
               |||||||||||||||||||||
Sbjct: 5208460 ccgtgaacgccagcgagggcg 5208480

>ref|XM_385491.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05315.1)
           partial mRNA
          Length = 1167

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 87  cgcgctcctcctcctgcttg 106
           ||||||||||||||||||||
Sbjct: 928 cgcgctcctcctcctgcttg 909

>gb|AC139156.3| Mus musculus BAC clone RP24-115J20 from chromosome 18, complete
             sequence
          Length = 175062

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    ccaccccacctccagttcac 41
             ||||||||||||||||||||
Sbjct: 45206 ccaccccacctccagttcac 45225

>gb|AC117191.4| Mus musculus BAC clone RP23-58O15 from 18, complete sequence
          Length = 149461

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 22     ccaccccacctccagttcac 41
              ||||||||||||||||||||
Sbjct: 144411 ccaccccacctccagttcac 144430

>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 316     agcgagggcgagctgcttgc 335
               ||||||||||||||||||||
Sbjct: 1896762 agcgagggcgagctgcttgc 1896743

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 203      cccgcgacgacgacgacagc 222
                ||||||||||||||||||||
Sbjct: 17084745 cccgcgacgacgacgacagc 17084764

>dbj|AP006057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1342C04
          Length = 172097

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   cccgcgacgacgacgacagc 222
             ||||||||||||||||||||
Sbjct: 25502 cccgcgacgacgacgacagc 25521

>dbj|AP005655.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0025H07
          Length = 145605

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   cccgcgacgacgacgacagc 222
             ||||||||||||||||||||
Sbjct: 78404 cccgcgacgacgacgacagc 78423


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,001,248
Number of Sequences: 3902068
Number of extensions: 3001248
Number of successful extensions: 74271
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74158
Number of HSP's gapped (non-prelim): 113
length of query: 339
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 317
effective length of database: 17,147,199,772
effective search space: 5435662327724
effective search space used: 5435662327724
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)