| Clone Name | bast50g03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC122816.4| Mus musculus BAC clone RP23-235N10 from chromosome 6, complete sequence Length = 177967 Score = 40.1 bits (20), Expect = 0.21 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 gcaagaagttgttgcttcgtgttc 32 |||||||||||||||||| ||||| Sbjct: 6284 gcaagaagttgttgcttcctgttc 6261
>gb|AC163724.4| Mus musculus BAC clone RP23-464C19 from chromosome 6, complete sequence Length = 177662 Score = 40.1 bits (20), Expect = 0.21 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 gcaagaagttgttgcttcgtgttc 32 |||||||||||||||||| ||||| Sbjct: 49271 gcaagaagttgttgcttcctgttc 49294
>dbj|AK052081.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230044H03 product:unclassifiable, full insert sequence Length = 1179 Score = 40.1 bits (20), Expect = 0.21 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 gcaagaagttgttgcttcgtgttc 32 |||||||||||||||||| ||||| Sbjct: 778 gcaagaagttgttgcttcctgttc 801
>emb|BX901889.4| Zebrafish DNA sequence from clone CH211-96I7 in linkage group 2, complete sequence Length = 172284 Score = 38.2 bits (19), Expect = 0.84 Identities = 19/19 (100%) Strand = Plus / Plus Query: 10 caagaagttgttgcttcgt 28 ||||||||||||||||||| Sbjct: 121206 caagaagttgttgcttcgt 121224
>gb|AC015821.9| Homo sapiens chromosome 17, clone RP11-160O5, complete sequence Length = 160184 Score = 38.2 bits (19), Expect = 0.84 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 ggcaagaagttgttgcttc 26 ||||||||||||||||||| Sbjct: 39804 ggcaagaagttgttgcttc 39822
>gb|AC060771.8| Homo sapiens chromosome 17, clone RP11-169I9, complete sequence Length = 138969 Score = 38.2 bits (19), Expect = 0.84 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 ggcaagaagttgttgcttc 26 ||||||||||||||||||| Sbjct: 132371 ggcaagaagttgttgcttc 132389
>emb|AL591517.8| Zebrafish DNA sequence from clone XX-204C9, complete sequence Length = 110834 Score = 38.2 bits (19), Expect = 0.84 Identities = 19/19 (100%) Strand = Plus / Plus Query: 10 caagaagttgttgcttcgt 28 ||||||||||||||||||| Sbjct: 83253 caagaagttgttgcttcgt 83271
>dbj|AK113344.1| Ciona intestinalis cDNA, clone:ciad040a04, full insert sequence Length = 1683 Score = 36.2 bits (18), Expect = 3.3 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 aagaagttgttgcttcgt 28 |||||||||||||||||| Sbjct: 398 aagaagttgttgcttcgt 415
>gb|AC154128.3| Tribolium castaneum BAC T.cast_C36A24 (Clemson University Genomics Institute Tribolium castaneum BAC Library (Red Flour Beetle)) complete sequence Length = 154107 Score = 36.2 bits (18), Expect = 3.3 Identities = 18/18 (100%) Strand = Plus / Minus Query: 14 aagttgttgcttcgtgtt 31 |||||||||||||||||| Sbjct: 111816 aagttgttgcttcgtgtt 111799 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 159,920 Number of Sequences: 3902068 Number of extensions: 159920 Number of successful extensions: 41324 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 41315 Number of HSP's gapped (non-prelim): 9 length of query: 35 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 15 effective length of database: 17,155,003,908 effective search space: 257325058620 effective search space used: 257325058620 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)