ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast50f11 |
|---|---|
| Clone Library Name | barley_pub |
>AP2B1_RAT (P62944) AP-2 complex subunit beta-1 (Adapter-related protein| complex 2 beta-1 subunit) (Beta-adaptin) (Plasma membrane adaptor HA2/AP2 adaptin beta subunit) (Clathrin assembly protein complex 2 beta large chain) (AP105B) Length = 937 Score = 32.0 bits (71), Expect = 0.61 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 8/75 (10%) Frame = +2 Query: 179 TEWLSIYLEDCLSNPASYSVSEEQA---SVNPKLPHXXXXXXXXXXXXLASVIR--DSDE 343 TEW I++ DCLSN E Q+ V P+L H L + D Sbjct: 215 TEWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDS 274 Query: 344 EYFTLIVE---PPLL 379 +Y+ ++++ PPL+ Sbjct: 275 DYYNMLLKKLAPPLV 289
>AP2B1_MOUSE (Q9DBG3) AP-2 complex subunit beta-1 (Adapter-related protein| complex 2 beta-1 subunit) (Beta-adaptin) (Plasma membrane adaptor HA2/AP2 adaptin beta subunit) (Clathrin assembly protein complex 2 beta large chain) (AP105B) Length = 937 Score = 32.0 bits (71), Expect = 0.61 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 8/75 (10%) Frame = +2 Query: 179 TEWLSIYLEDCLSNPASYSVSEEQA---SVNPKLPHXXXXXXXXXXXXLASVIR--DSDE 343 TEW I++ DCLSN E Q+ V P+L H L + D Sbjct: 215 TEWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDS 274 Query: 344 EYFTLIVE---PPLL 379 +Y+ ++++ PPL+ Sbjct: 275 DYYNMLLKKLAPPLV 289
>AP2B1_HUMAN (P63010) AP-2 complex subunit beta-1 (Adapter-related protein| complex 2 beta-1 subunit) (Beta-adaptin) (Plasma membrane adaptor HA2/AP2 adaptin beta subunit) (Clathrin assembly protein complex 2 beta large chain) (AP105B) Length = 937 Score = 32.0 bits (71), Expect = 0.61 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 8/75 (10%) Frame = +2 Query: 179 TEWLSIYLEDCLSNPASYSVSEEQA---SVNPKLPHXXXXXXXXXXXXLASVIR--DSDE 343 TEW I++ DCLSN E Q+ V P+L H L + D Sbjct: 215 TEWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDS 274 Query: 344 EYFTLIVE---PPLL 379 +Y+ ++++ PPL+ Sbjct: 275 DYYNMLLKKLAPPLV 289
>AP1B1_RAT (P52303) AP-1 complex subunit beta-1 (Adapter-related protein| complex 1 beta-1 subunit) (Beta-adaptin 1) (Adaptor protein complex AP-1 beta-1 subunit) (Golgi adaptor HA1/AP1 adaptin beta subunit) (Clathrin assembly protein complex 1 beta large Length = 949 Score = 29.6 bits (65), Expect = 3.0 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 8/75 (10%) Frame = +2 Query: 179 TEWLSIYLEDCLSNPASYSVSEEQA---SVNPKLPHXXXXXXXXXXXXLASVIR--DSDE 343 TEW I++ DCL N E Q+ V P+L H L + D Sbjct: 215 TEWAQIFILDCLGNYMPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDL 274 Query: 344 EYFTLIVE---PPLL 379 +Y+ +++ PPL+ Sbjct: 275 DYYATLLKKLAPPLV 289
>AP1B1_MOUSE (O35643) AP-1 complex subunit beta-1 (Adapter-related protein| complex 1 beta-1 subunit) (Beta-adaptin 1) (Adaptor protein complex AP-1 beta-1 subunit) (Golgi adaptor HA1/AP1 adaptin beta subunit) (Clathrin assembly protein complex 1 beta larg Length = 943 Score = 28.5 bits (62), Expect = 6.7 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 8/75 (10%) Frame = +2 Query: 179 TEWLSIYLEDCLSNPASYSVSEEQA---SVNPKLPHXXXXXXXXXXXXLASVIR--DSDE 343 TEW I++ DCL N E Q+ V P+L H L + D Sbjct: 215 TEWGQIFILDCLDNYMPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDL 274 Query: 344 EYFTLIVE---PPLL 379 +Y+ +++ PPL+ Sbjct: 275 DYYATLLKKLAPPLV 289
>ACT_TRYCR (P53477) Actin| Length = 376 Score = 28.1 bits (61), Expect = 8.8 Identities = 14/41 (34%), Positives = 19/41 (46%) Frame = +2 Query: 146 HEPATESEDSSTEWLSIYLEDCLSNPASYSVSEEQASVNPK 268 H T +D W + D NP S+SV +A +NPK Sbjct: 74 HGIVTNWDDMEKIWHHTFYNDVRVNPESHSVLLTEAPMNPK 114
>AP1B1_HUMAN (Q10567) AP-1 complex subunit beta-1 (Adapter-related protein| complex 1 beta-1 subunit) (Beta-adaptin 1) (Adaptor protein complex AP-1 beta-1 subunit) (Golgi adaptor HA1/AP1 adaptin beta subunit) (Clathrin assembly protein complex 1 beta larg Length = 949 Score = 28.1 bits (61), Expect = 8.8 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 8/75 (10%) Frame = +2 Query: 179 TEWLSIYLEDCLSNPASYSVSEEQA---SVNPKLPHXXXXXXXXXXXXLASVIR--DSDE 343 TEW I++ DCL+N E Q+ V P+L H L + D Sbjct: 215 TEWGQIFILDCLANYMPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDL 274 Query: 344 EYFTLIVE---PPLL 379 +Y+ +++ PPL+ Sbjct: 275 DYYGTLLKKLAPPLV 289 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,711,625 Number of Sequences: 219361 Number of extensions: 627246 Number of successful extensions: 1422 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1395 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1422 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2278320915 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
