ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast50f11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
2dbj|AK101421.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 2e-12
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 82 2e-12
4emb|AL731889.5|CNS08C8T Oryza sativa chromosome 12, . BAC OJ1122... 82 2e-12
5emb|BX000561.2|CNS08CE7 Oryza sativa chromosome 12, . BAC OJ1014... 82 2e-12
6gb|AC116138.21| Mus musculus chromosome 10, clone RP23-123D17, c... 44 0.36
7gb|AC158806.4| Mus musculus 10 BAC RP24-89F13 (Roswell Park Canc... 44 0.36
8dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromo... 44 0.36
9ref|XM_630285.1| Dictyostelium discoideum hypothetical protein (... 42 1.4
10gb|AY104292.1| Zea mays PCO099333 mRNA sequence 42 1.4
11gb|AC010577.5| Drosophila melanogaster clone BACR22J20, complete... 40 5.7
12gb|AC011705.11| Drosophila melanogaster clone BACR10C18, complet... 40 5.7
13gb|CP000114.1| Streptococcus agalactiae A909, complete genome 40 5.7
14emb|AL357034.18| Human DNA sequence from clone RP11-560I21 on ch... 40 5.7
15emb|AL121929.17|HSBA416N2 Human DNA sequence from clone RP11-416... 40 5.7
16gb|AE014227.1| Streptococcus agalactiae 2603V/R section 37 of 10... 40 5.7
17emb|AL766847.1|SAG766847 Streptococcus agalactiae NEM316 complet... 40 5.7
18emb|AJ427478.2|SSC427478 Sus scrofa ASIP gene for agouti signall... 40 5.7
19emb|AL928857.15| Mouse DNA sequence from clone RP24-499A8 on chr... 40 5.7
20emb|CR394564.8| Zebrafish DNA sequence from clone DKEY-1K1 in li... 40 5.7
21emb|BX323082.7| Zebrafish DNA sequence from clone RP71-24N4 in l... 40 5.7
22ref|NM_166822.3| Drosophila melanogaster shaven CG11049-RC, tran... 40 5.7
23ref|NM_079894.3| Drosophila melanogaster shaven CG11049-RA, tran... 40 5.7
24ref|NM_001014701.1| Drosophila melanogaster shaven CG11049-RD, t... 40 5.7
25ref|NM_001014700.1| Drosophila melanogaster shaven CG11049-RE, t... 40 5.7
26ref|NM_001014699.1| Drosophila melanogaster shaven CG11049-RF, t... 40 5.7
27ref|NM_001014698.1| Drosophila melanogaster shaven CG11049-RG, t... 40 5.7
28ref|NM_001014697.1| Drosophila melanogaster shaven CG11049-RH, t... 40 5.7
29gb|AF016888.1|AF016888 Drosophila melanogaster paired box protei... 40 5.7
30gb|AC008338.7|AC008338 Drosophila melanogaster, chromosome X, re... 40 5.7
31gb|AC084684.1|CBRMM06C2 Caenorhabditis briggsae cosmid MM06C2, c... 40 5.7
32gb|AE003571.4| Drosophila melanogaster chromosome X, section 68 ... 40 5.7
33gb|AE003846.5| Drosophila melanogaster chromosome 4, section 5 o... 40 5.7
34gb|AF010256.1|AF010256 Drosophila melanogaster sparkling protein... 40 5.7
35emb|AL806528.14| Mouse DNA sequence from clone RP23-190C17 on ch... 40 5.7
36emb|AL732403.9| Mouse DNA sequence from clone RP23-119L20 on chr... 40 5.7

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 123/149 (82%), Gaps = 6/149 (4%)
 Strand = Plus / Plus

                                                                            
Query: 281      tcatcttccaatcccagaagaaagaagagaagcctggcctctgtcataagagatagtgat 340
                |||||| ||||| | |||| |||||| || |||||||| ||||||||||| || | ||||
Sbjct: 26728932 tcatctaccaatgcaagaaaaaagaaaaggagcctggcatctgtcataagcgacactgat 26728991

                                                                            
Query: 341      gaagaatatt---tcacgctgattgttgagccaccgctactactt---gatcagaagcac 394
                ||  || |||   |||||||| |||| |||||||||||||| ||    ||||| ||| ||
Sbjct: 26728992 gaccaacattgtatcacgctgtttgtcgagccaccgctactcctgctcgatcataaggac 26729051

                                             
Query: 395      tggctagcagagagtgagctcatcctccc 423
                |||||||||||||||||||| ||||||||
Sbjct: 26729052 tggctagcagagagtgagcttatcctccc 26729080



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                  
Query: 181      agagtggctctccatctatttagaggactgcttgtctaaccctgcatcct 230
                ||||||||||||  ||||| |||||||||||||||| | | |||||||||
Sbjct: 26728802 agagtggctctctgtctatgtagaggactgcttgtcaacctctgcatcct 26728851



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>dbj|AK101421.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033038C04, full
           insert sequence
          Length = 1452

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 123/149 (82%), Gaps = 6/149 (4%)
 Strand = Plus / Plus

                                                                       
Query: 281 tcatcttccaatcccagaagaaagaagagaagcctggcctctgtcataagagatagtgat 340
           |||||| ||||| | |||| |||||| || |||||||| ||||||||||| || | ||||
Sbjct: 324 tcatctaccaatgcaagaaaaaagaaaaggagcctggcatctgtcataagcgacactgat 383

                                                                       
Query: 341 gaagaatatt---tcacgctgattgttgagccaccgctactactt---gatcagaagcac 394
           ||  || |||   |||||||| |||| |||||||||||||| ||    ||||| ||| ||
Sbjct: 384 gaccaacattgtatcacgctgtttgtcgagccaccgctactcctgctcgatcataaggac 443

                                        
Query: 395 tggctagcagagagtgagctcatcctccc 423
           |||||||||||||||||||| ||||||||
Sbjct: 444 tggctagcagagagtgagcttatcctccc 472



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 81/94 (86%), Gaps = 2/94 (2%)
 Strand = Plus / Plus

                                                                       
Query: 138 tgttcccccacgagcccgccacggaaagtga-agacagcagcacagagtggctctccatc 196
           ||||||| ||| ||||||||||||||||||| ||| ||  ||| ||||||||||||  ||
Sbjct: 151 tgttcccgcaccagcccgccacggaaagtgataga-agtggcatagagtggctctctgtc 209

                                             
Query: 197 tatttagaggactgcttgtctaaccctgcatcct 230
           ||| |||||||||||||||| | | |||||||||
Sbjct: 210 tatgtagaggactgcttgtcaacctctgcatcct 243



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 123/149 (82%), Gaps = 6/149 (4%)
 Strand = Plus / Plus

                                                                            
Query: 281      tcatcttccaatcccagaagaaagaagagaagcctggcctctgtcataagagatagtgat 340
                |||||| ||||| | |||| |||||| || |||||||| ||||||||||| || | ||||
Sbjct: 26657102 tcatctaccaatgcaagaaaaaagaaaaggagcctggcatctgtcataagcgacactgat 26657161

                                                                            
Query: 341      gaagaatatt---tcacgctgattgttgagccaccgctactactt---gatcagaagcac 394
                ||  || |||   |||||||| |||| |||||||||||||| ||    ||||| ||| ||
Sbjct: 26657162 gaccaacattgtatcacgctgtttgtcgagccaccgctactcctgctcgatcataaggac 26657221

                                             
Query: 395      tggctagcagagagtgagctcatcctccc 423
                |||||||||||||||||||| ||||||||
Sbjct: 26657222 tggctagcagagagtgagcttatcctccc 26657250



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                  
Query: 181      agagtggctctccatctatttagaggactgcttgtctaaccctgcatcct 230
                ||||||||||||  ||||| |||||||||||||||| | | |||||||||
Sbjct: 26656972 agagtggctctctgtctatgtagaggactgcttgtcaacctctgcatcct 26657021



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>emb|AL731889.5|CNS08C8T Oryza sativa chromosome 12, . BAC OJ1122_G07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 83015

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 123/149 (82%), Gaps = 6/149 (4%)
 Strand = Plus / Minus

                                                                         
Query: 281   tcatcttccaatcccagaagaaagaagagaagcctggcctctgtcataagagatagtgat 340
             |||||| ||||| | |||| |||||| || |||||||| ||||||||||| || | ||||
Sbjct: 42190 tcatctaccaatgcaagaaaaaagaaaaggagcctggcatctgtcataagcgacactgat 42131

                                                                         
Query: 341   gaagaatatt---tcacgctgattgttgagccaccgctactactt---gatcagaagcac 394
             ||  || |||   |||||||| |||| |||||||||||||| ||    ||||| ||| ||
Sbjct: 42130 gaccaacattgtatcacgctgtttgtcgagccaccgctactcctgctcgatcataaggac 42071

                                          
Query: 395   tggctagcagagagtgagctcatcctccc 423
             |||||||||||||||||||| ||||||||
Sbjct: 42070 tggctagcagagagtgagcttatcctccc 42042



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 181   agagtggctctccatctatttagaggactgcttgtctaaccctgcatcct 230
             ||||||||||||  ||||| |||||||||||||||| | | |||||||||
Sbjct: 42320 agagtggctctctgtctatgtagaggactgcttgtcaacctctgcatcct 42271



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>emb|BX000561.2|CNS08CE7 Oryza sativa chromosome 12, . BAC OJ1014_F06 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 104849

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 123/149 (82%), Gaps = 6/149 (4%)
 Strand = Plus / Minus

                                                                         
Query: 281   tcatcttccaatcccagaagaaagaagagaagcctggcctctgtcataagagatagtgat 340
             |||||| ||||| | |||| |||||| || |||||||| ||||||||||| || | ||||
Sbjct: 70046 tcatctaccaatgcaagaaaaaagaaaaggagcctggcatctgtcataagcgacactgat 69987

                                                                         
Query: 341   gaagaatatt---tcacgctgattgttgagccaccgctactactt---gatcagaagcac 394
             ||  || |||   |||||||| |||| |||||||||||||| ||    ||||| ||| ||
Sbjct: 69986 gaccaacattgtatcacgctgtttgtcgagccaccgctactcctgctcgatcataaggac 69927

                                          
Query: 395   tggctagcagagagtgagctcatcctccc 423
             |||||||||||||||||||| ||||||||
Sbjct: 69926 tggctagcagagagtgagcttatcctccc 69898



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 181   agagtggctctccatctatttagaggactgcttgtctaaccctgcatcct 230
             ||||||||||||  ||||| |||||||||||||||| | | |||||||||
Sbjct: 70176 agagtggctctctgtctatgtagaggactgcttgtcaacctctgcatcct 70127



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>gb|AC116138.21| Mus musculus chromosome 10, clone RP23-123D17, complete sequence
          Length = 219004

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 218    aaccctgcatcctactctgtct 239
              ||||||||||||||||||||||
Sbjct: 184854 aaccctgcatcctactctgtct 184875



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>gb|AC158806.4| Mus musculus 10 BAC RP24-89F13 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 227508

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 218    aaccctgcatcctactctgtct 239
              ||||||||||||||||||||||
Sbjct: 207944 aaccctgcatcctactctgtct 207923



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>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence
          Length = 3288558

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 352     cacgctgattgttgagccaccg 373
               ||||||||||||||||||||||
Sbjct: 1200143 cacgctgattgttgagccaccg 1200164



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>ref|XM_630285.1| Dictyostelium discoideum hypothetical protein (DDB0189292), partial
           mRNA
          Length = 882

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 334 tagtgatgaagaatatttcac 354
           |||||||||||||||||||||
Sbjct: 57  tagtgatgaagaatatttcac 77



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>gb|AY104292.1| Zea mays PCO099333 mRNA sequence
          Length = 1025

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 348 atttcacgctgattgttgagccaccgcta 376
           ||||||||||| || ||||||||||||||
Sbjct: 664 atttcacgctgttttttgagccaccgcta 636



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>gb|AC010577.5| Drosophila melanogaster clone BACR22J20, complete sequence
          Length = 152661

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 155   gccacggaaagtgaagacagcagcacag 182
             |||||||||||||  |||||||||||||
Sbjct: 81724 gccacggaaagtgttgacagcagcacag 81697



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>gb|AC011705.11| Drosophila melanogaster clone BACR10C18, complete sequence
          Length = 170975

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 259    aaacccgaagctgccacatc 278
              ||||||||||||||||||||
Sbjct: 158424 aaacccgaagctgccacatc 158405



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>gb|CP000114.1| Streptococcus agalactiae A909, complete genome
          Length = 2127839

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 297    gaagaaagaagagaagcctg 316
              ||||||||||||||||||||
Sbjct: 846734 gaagaaagaagagaagcctg 846715



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>emb|AL357034.18| Human DNA sequence from clone RP11-560I21 on chromosome 6 Contains the
             3' end of the STX7 gene for syntaxin 7, the 5' end of the
             MOXD1 gene for monooxygenase DBH-like 1 and two CpG
             islands, complete sequence
          Length = 127703

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 293   cccagaagaaagaagagaag 312
             ||||||||||||||||||||
Sbjct: 45513 cccagaagaaagaagagaag 45494



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>emb|AL121929.17|HSBA416N2 Human DNA sequence from clone RP11-416N2 on chromosome 10 Contains the 3'
              end of the NEURL gene for neuralized-like (Drosophila), the
              3' end of the SH3MD1 gene for SH3 multiple domains 1 and
              seven CpG islands, complete sequence
          Length = 203262

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 222    ctgcatcctactctgtctcc 241
              ||||||||||||||||||||
Sbjct: 191173 ctgcatcctactctgtctcc 191154



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>gb|AE014227.1| Streptococcus agalactiae 2603V/R section 37 of 100 of the complete
            genome
          Length = 25313

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 297  gaagaaagaagagaagcctg 316
            ||||||||||||||||||||
Sbjct: 2547 gaagaaagaagagaagcctg 2528



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>emb|AL766847.1|SAG766847 Streptococcus agalactiae NEM316 complete genome, segment 5
          Length = 167050

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 297   gaagaaagaagagaagcctg 316
             ||||||||||||||||||||
Sbjct: 29466 gaagaaagaagagaagcctg 29447



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>emb|AJ427478.2|SSC427478 Sus scrofa ASIP gene for agouti signalling protein and AHCY gene for
             S-adenosylhomocysteine hydrolase
          Length = 204138

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 258   taaacccgaagctgccacatccttcatc 285
             |||||| |||||||||||||| ||||||
Sbjct: 47813 taaacctgaagctgccacatctttcatc 47840



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>emb|AL928857.15| Mouse DNA sequence from clone RP24-499A8 on chromosome 11 Contains the
             5' end of the Gemin5 gene for gem (nuclear organelle)
             associated protein 5,  a novel gene, a interferon gamma
             inducible protein (Ifi47) pseudogene, the Igtp gene for
             interferon gamma induced GTPase, the Gtpi-pending gene for
             interferon-g induced GTPase, a novel gene and one CpG
             island, complete sequence
          Length = 133633

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 300   gaaagaagagaagcctggcctctg 323
             |||||||||||||||||| |||||
Sbjct: 40513 gaaagaagagaagcctggtctctg 40490



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>emb|CR394564.8| Zebrafish DNA sequence from clone DKEY-1K1 in linkage group 8, complete
             sequence
          Length = 227475

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   ccacggaaagtgaagacagc 175
             ||||||||||||||||||||
Sbjct: 35420 ccacggaaagtgaagacagc 35401



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>emb|BX323082.7| Zebrafish DNA sequence from clone RP71-24N4 in linkage group 8,
             complete sequence
          Length = 99221

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   ccacggaaagtgaagacagc 175
             ||||||||||||||||||||
Sbjct: 36630 ccacggaaagtgaagacagc 36649



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>ref|NM_166822.3| Drosophila melanogaster shaven CG11049-RC, transcript variant C (sv),
            mRNA
          Length = 4082

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 155  gccacggaaagtgaagacagcagcacag 182
            |||||||||||||  |||||||||||||
Sbjct: 1251 gccacggaaagtgttgacagcagcacag 1278



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>ref|NM_079894.3| Drosophila melanogaster shaven CG11049-RA, transcript variant A (sv),
            mRNA
          Length = 4673

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 155  gccacggaaagtgaagacagcagcacag 182
            |||||||||||||  |||||||||||||
Sbjct: 1251 gccacggaaagtgttgacagcagcacag 1278



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>ref|NM_001014701.1| Drosophila melanogaster shaven CG11049-RD, transcript variant D (sv),
            mRNA
          Length = 4181

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 155  gccacggaaagtgaagacagcagcacag 182
            |||||||||||||  |||||||||||||
Sbjct: 1251 gccacggaaagtgttgacagcagcacag 1278



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>ref|NM_001014700.1| Drosophila melanogaster shaven CG11049-RE, transcript variant E (sv),
            mRNA
          Length = 4690

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 155  gccacggaaagtgaagacagcagcacag 182
            |||||||||||||  |||||||||||||
Sbjct: 1251 gccacggaaagtgttgacagcagcacag 1278



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>ref|NM_001014699.1| Drosophila melanogaster shaven CG11049-RF, transcript variant F (sv),
            mRNA
          Length = 2730

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 155  gccacggaaagtgaagacagcagcacag 182
            |||||||||||||  |||||||||||||
Sbjct: 1251 gccacggaaagtgttgacagcagcacag 1278



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>ref|NM_001014698.1| Drosophila melanogaster shaven CG11049-RG, transcript variant G (sv),
            mRNA
          Length = 2238

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 155  gccacggaaagtgaagacagcagcacag 182
            |||||||||||||  |||||||||||||
Sbjct: 1251 gccacggaaagtgttgacagcagcacag 1278



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>ref|NM_001014697.1| Drosophila melanogaster shaven CG11049-RH, transcript variant H (sv),
            mRNA
          Length = 4667

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 155  gccacggaaagtgaagacagcagcacag 182
            |||||||||||||  |||||||||||||
Sbjct: 1251 gccacggaaagtgttgacagcagcacag 1278



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>gb|AF016888.1|AF016888 Drosophila melanogaster paired box protein (dPax258) mRNA, partial
           cds
          Length = 2652

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 155 gccacggaaagtgaagacagcagcacag 182
           |||||||||||||  |||||||||||||
Sbjct: 456 gccacggaaagtgttgacagcagcacag 483



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>gb|AC008338.7|AC008338 Drosophila melanogaster, chromosome X, region 19C-19E, BAC clone
             BACR30J04, complete sequence
          Length = 177277

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 259   aaacccgaagctgccacatc 278
             ||||||||||||||||||||
Sbjct: 70358 aaacccgaagctgccacatc 70339



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>gb|AC084684.1|CBRMM06C2 Caenorhabditis briggsae cosmid MM06C2, complete sequence
          Length = 27000

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 294   ccagaagaaagaagagaagc 313
             ||||||||||||||||||||
Sbjct: 25494 ccagaagaaagaagagaagc 25513



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 294   ccagaagaaagaagagaagc 313
             ||||||||||||||||||||
Sbjct: 25149 ccagaagaaagaagagaagc 25168



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>gb|AE003571.4| Drosophila melanogaster chromosome X, section 68 of 74 of the complete
             sequence
          Length = 302538

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 259   aaacccgaagctgccacatc 278
             ||||||||||||||||||||
Sbjct: 35655 aaacccgaagctgccacatc 35636



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>gb|AE003846.5| Drosophila melanogaster chromosome 4, section 5 of 5 of the complete
              sequence
          Length = 356494

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 155    gccacggaaagtgaagacagcagcacag 182
              |||||||||||||  |||||||||||||
Sbjct: 201347 gccacggaaagtgttgacagcagcacag 201374



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>gb|AF010256.1|AF010256 Drosophila melanogaster sparkling protein (spa) mRNA, complete cds
          Length = 4672

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 155  gccacggaaagtgaagacagcagcacag 182
            |||||||||||||  |||||||||||||
Sbjct: 1251 gccacggaaagtgttgacagcagcacag 1278



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>emb|AL806528.14| Mouse DNA sequence from clone RP23-190C17 on chromosome 2, complete
             sequence
          Length = 214642

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   ccctgcatcctactctgtct 239
             ||||||||||||||||||||
Sbjct: 30476 ccctgcatcctactctgtct 30495



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>emb|AL732403.9| Mouse DNA sequence from clone RP23-119L20 on chromosome 2, complete
              sequence
          Length = 211892

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 247    acaagcatctgtaaacccga 266
              ||||||||||||||||||||
Sbjct: 150915 acaagcatctgtaaacccga 150934


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,517,300
Number of Sequences: 3902068
Number of extensions: 3517300
Number of successful extensions: 79198
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79079
Number of HSP's gapped (non-prelim): 108
length of query: 423
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 401
effective length of database: 17,147,199,772
effective search space: 6876027108572
effective search space used: 6876027108572
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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