>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 97.8 bits (242), Expect = 1e-20
 Identities = 47/90 (52%), Positives = 59/90 (65%)
 Frame = +1

Query: 133 VPGVFTFGDSTVDIGNNDYLHTLIKADFPPYGRDFPNRVATGRFCNGKLATDITADTLGF 312
           +P VF FGDS  D GNN+ L T IK+++ PYG DF  RVATGRF NG +A+D  A  +G 
Sbjct: 202 IPAVFFFGDSVFDTGNNNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMGV 261

Query: 313 TSYPPAYLSPQASGKNLLIGANFASAGSGY 402
               PAYL P+    +LL G +FAS G+GY
Sbjct: 262 KEIVPAYLDPKIQPNDLLTGVSFASGGAGY 291

>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 89.7 bits (221), Expect = 3e-18
 Identities = 46/100 (46%), Positives = 59/100 (59%), Gaps = 6/100 (6%)
 Frame = +1

Query: 133 VPGVFTFGDSTVDIGNNDYLHTLIKADFPPYGRDFPNRVATGRFCNGKLATDITADTLGF 312
           +P VF FGDS  D GNN+ L T +K ++ PYG DFP  VATGRF NG++A+D  +  LG 
Sbjct: 123 IPAVFFFGDSIFDTGNNNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYLGV 182

Query: 313 TSYPPAYLSPQASGKN------LLIGANFASAGSGYYDHT 414
               PAY+  +    N      LL G +FAS G+GY   T
Sbjct: 183 KEIVPAYVDKKLQQNNELQQSDLLTGVSFASGGAGYLPQT 222

>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 55.1 bits (131), Expect = 8e-08
 Identities = 36/87 (41%), Positives = 46/87 (52%)
 Frame = +1

Query: 136 PGVFTFGDSTVDIGNNDYLHTLIKADFPPYGRDFPNRVATGRFCNGKLATDITADTLGFT 315
           P +F FGDS  D G    L        PP+G  F    A GR+C+G+L  D  A++LG  
Sbjct: 29  PAIFNFGDSNSDTGG---LSAAFGQAGPPHGSSFFGSPA-GRYCDGRLVIDFIAESLGL- 83

Query: 316 SYPPAYLSPQASGKNLLIGANFASAGS 396
            Y  A+L   + G N   GANFA+AGS
Sbjct: 84  PYLSAFL--DSVGSNFSHGANFATAGS 108

>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 36/89 (40%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
 Frame = +1

Query: 136 PGVFTFGDSTVDIGNNDYLHTLIKADFPPYGRDFPNRVATGRFCNGKLATDITADTLGFT 315
           P +F FGDS  D G        +    PPYG  F +R +TGR+ +G+L  D  A+     
Sbjct: 33  PAIFNFGDSNSDTGGKAAAFYPLN---PPYGETFFHR-STGRYSDGRLIIDFIAE----- 83

Query: 316 SYPPAYLSPQAS--GKNLLIGANFASAGS 396
           S+   YLSP  S  G N   GA+FA+AGS
Sbjct: 84  SFNLPYLSPYLSSLGSNFKHGADFATAGS 112

>INO80_GIBZE (Q4IL82) Putative DNA helicase INO80 (EC 3.6.1.-)|
          Length = 1904

 Score = 35.8 bits (81), Expect = 0.049
 Identities = 19/49 (38%), Positives = 22/49 (44%)
 Frame = +3

Query: 72  PVAPGYPPPDGDSWRGGAAACARGLHVRRLDGRHRQQRLPPHPHQGGLP 218
           PVAP  PPP G +      + A GLH      RH Q   P H H+   P
Sbjct: 135 PVAPALPPPVGINSSSSPGSSAAGLH-----QRHHQPGAPAHQHRAAPP 178

>GPR37_MOUSE (Q9QY42) Probable G-protein coupled receptor 37 precursor|
          Length = 600

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 21/64 (32%), Positives = 26/64 (40%)
 Frame = +3

Query: 72  PVAPGYPPPDGDSWRGGAAACARGLHVRRLDGRHRQQRLPPHPHQGGLPSLRQGLPQSRG 251
           P+ P   PP    W+        G H+RR D    Q   P     G + S R G+PQSR 
Sbjct: 106 PLGPPTKPPSAWRWKSAQGKEPSG-HLRRRDPTDPQLFFPTS-EGGEMSSKRDGIPQSRQ 163

Query: 252 HREV 263
              V
Sbjct: 164 EHSV 167

>TIM14_YARLI (Q6CEU0) Mitochondrial import inner membrane translocase subunit|
           TIM14 (Presequence translocated-associated motor subunit
           PAM18)
          Length = 148

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = +3

Query: 141 GLHVRRLDGRHRQQRLPPHPHQGGLPSLRQGLPQSRGHREVLQRQAG 281
           GL + +L G+HR+  L  HP +GG P +   + ++   + VL+++ G
Sbjct: 103 GLTMNKLKGQHRKIMLLNHPDRGGSPYVATKINEA---KSVLEKRGG 146

>MINT_MOUSE (Q62504) Msx2-interacting protein (SPEN homolog)|
            (SMART/HDAC1-associated repressor protein)
          Length = 3644

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = +3

Query: 81   PGYPPPDGDSWRGGAA---ACARGLHVRRLDGRHRQQRLPPHPHQGGLPSLRQGLPQSRG 251
            P   P   + WR   +   A A G   +R  GR+ +Q++      G   S R+G P+SRG
Sbjct: 1989 PAETPRPAEGWRSPRSQKSAAAAGPQGKR--GRN-EQKVEAAAEAGAQASTREGNPKSRG 2045

Query: 252  HRE 260
             RE
Sbjct: 2046 ERE 2048

>BTBDC_HUMAN (Q8IY92) BTB/POZ domain-containing protein 12|
          Length = 1151

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = +3

Query: 75  VAPGYPPPDGDSWRGGAAACARGLHVRRLDGRHRQQRLPPHPHQGGLP 218
           + P  PPP   S      +C   +     DGR +  R P  PH GG P
Sbjct: 628 IRPQTPPPQTPS------SCLTPVSPGTSDGRRQGHRSPSRPHPGGHP 669

>RAIN_MOUSE (Q3U0S6) Ras-interacting protein 1 (Rain)|
          Length = 961

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 20/67 (29%), Positives = 24/67 (35%), Gaps = 6/67 (8%)
 Frame = +3

Query: 69  VPVAPGYPPPDGDSWRGGAAACARGLHVR------RLDGRHRQQRLPPHPHQGGLPSLRQ 230
           +P  PG  PP G  W      C RGL  R       LDGR    R  P   +  L  + +
Sbjct: 497 LPARPGAAPP-GPGWAFSCRLCGRGLQERGEALAAYLDGREPVLRFRPREEEALLGEIVR 555

Query: 231 GLPQSRG 251
                 G
Sbjct: 556 AAASGAG 562

>WDR22_HUMAN (Q96JK2) WD-repeat protein 22 (Breakpoint cluster region protein 2)|
            (BCRP2)
          Length = 942

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 30/119 (25%), Positives = 42/119 (35%), Gaps = 18/119 (15%)
 Frame = +3

Query: 66   EVPVAPGYPPPDGDSWRGGAAACARGLH-------VRRLDGRHRQQRL---PPHPHQGG- 212
            E P +P  P   G +   G+  C R          +  +   H   RL   PPHPH  G 
Sbjct: 790  EEPPSPPVPKASGSTLNSGSGNCPRTQSDDSEERSLETICANHNNGRLHPRPPHPHNNGQ 849

Query: 213  -LPSLRQGLPQSRGHREVLQRQAG------HRHHC*YTWVHKLPAGISQPAGVGEEPSD 368
             L  L      S GH +  +  +       H+  C      + P      AG  E+P+D
Sbjct: 850  NLGELEVVAYSSPGHSDTDRDNSSLTGTLLHKDCCGSEMACETP-----NAGTREDPTD 903

>PO3F3_HUMAN (P20264) POU domain, class 3, transcription factor 3|
           (Brain-specific homeobox/POU domain protein 1) (Brain-1)
           (Brn-1 protein)
          Length = 500

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 20/55 (36%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
 Frame = +3

Query: 57  GG*EVPVAPGYPPPDGDSWRGGAAA----CARGLHVRRLDGRHRQQRLPPHPHQG 209
           G  + P  P  PPP G   +GGA          LH R   G       PP PHQG
Sbjct: 131 GSPQQPPQPPPPPPQGPDVKGGAGRDDLHAGTALHHR---GPPHLGPPPPPPHQG 182

>YEL8_YEAST (P39943) Hypothetical 43.1 kDa protein in GAL83-YPT8 intergenic|
           region
          Length = 394

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 18/60 (30%), Positives = 25/60 (41%)
 Frame = +3

Query: 93  PPDGDSWRGGAAACARGLHVRRLDGRHRQQRLPPHPHQGGLPSLRQGLPQSRGHREVLQR 272
           PPD D        C+RG H      RH +      PH+  +    QG P+S    + L+R
Sbjct: 9   PPDNDQRPFRCEICSRGFHRLEHKKRHGRTHTGEKPHKCTV----QGCPKSFSRSDELKR 64

>NKX24_MOUSE (Q9EQM3) Homeobox protein Nkx-2.4 (Homeobox protein NKX2.4)|
           (Homeobox protein NK-2 homolog D)
          Length = 354

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 19/56 (33%), Positives = 26/56 (46%)
 Frame = +3

Query: 6   PPKIIRDSIKSLS*FCNGG*EVPVAPGYPPPDGDSWRGGAAACARGLHVRRLDGRH 173
           PP + +    ++  +CNGG       G  P   D  RGGAAA A G +    D R+
Sbjct: 96  PPGVSQFPHSAMGSYCNGGLG---NMGELPAYTDGMRGGAAAAATGWYGANTDPRY 148

>RAIN_HUMAN (Q5U651) Ras-interacting protein 1 (Rain)|
          Length = 963

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 6/52 (11%)
 Frame = +3

Query: 69  VPVAPGYPPPDGDSWRGGAAACARGLHVR------RLDGRHRQQRLPPHPHQ 206
           +P  PG  PP G  W      C RGL  R       LDGR    R  P   +
Sbjct: 503 LPARPGATPP-GPGWAFSCRLCGRGLQERGEALAAYLDGREPVLRFRPREEE 553

>PO3F3_MOUSE (P31361) POU domain, class 3, transcription factor 3|
           (Brain-specific homeobox/POU domain protein 1) (Brain-1)
           (Brn-1 protein)
          Length = 495

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 20/55 (36%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
 Frame = +3

Query: 57  GG*EVPVAPGYPPPDGDSWRGGAAA----CARGLHVRRLDGRHRQQRLPPHPHQG 209
           G  + P  P  PPP G   +GGA          LH R   G       PP PHQG
Sbjct: 128 GSPQQPPQPPPPPPQGPDVKGGAGREDLHAGTALHHR---GPPHLGPPPPPPHQG 179

>DXS1_STRCO (Q9X7W3) 1-deoxy-D-xylulose-5-phosphate synthase 1 (EC 2.2.1.7)|
           (1-deoxyxylulose-5-phosphate synthase 1) (DXP synthase
           1) (DXPS 1)
          Length = 656

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = -1

Query: 384 REVGTDQKVLPRRLRAEICRRVACEPKCISSDVGGQLAVAKPPGGHAIG 238
           R  G  ++ L    RAE+   +   P  ++  +   LA+A+P G  A G
Sbjct: 583 RRFGIPEQFLAHAKRAEVLADIGLTPVDVAGRIAASLALAEPAGDRAGG 631

>CI066_HUMAN (Q5T8R8) Protein C9orf66|
          Length = 295

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 20/76 (26%), Positives = 29/76 (38%), Gaps = 18/76 (23%)
 Frame = +3

Query: 75  VAPGYPPPDGDSWRGGAAACARGLHVRRLDGRHRQQRL------------------PPHP 200
           ++P + P    +  GGA    RG   RRL      + L                  PP P
Sbjct: 15  LSPFWDPATCKNLEGGAGEVVRGRDPRRLRTSRSTEILGEDLAGPSAGAAARPAAPPPQP 74

Query: 201 HQGGLPSLRQGLPQSR 248
            + G P LR+  P++R
Sbjct: 75  REPGAPGLRRAPPRTR 90

>PUR2_LACLA (Q9ZF44) Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS)|
           (Glycinamide ribonucleotide synthetase)
           (Phosphoribosylglycinamide synthetase)
          Length = 412

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
 Frame = +1

Query: 181 NDYLHTLIKADFPPYGRDFPNRVATGRFCNGKLATDI-------TADTLGFTSYPPAYLS 339
           N  +   IKA+ P +G   PN++A     +   A  I       TAD   F S  PA   
Sbjct: 77  NGVVDAFIKAELPIFG---PNKMAAELEGSKDFAKSIMKKYGVPTADYATFDSLEPALAY 133

Query: 340 PQASGKNLLIGANFASAGSG 399
               G  L+I A+  +AG G
Sbjct: 134 LDEKGVPLVIKADGLAAGKG 153


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,362,563
Number of Sequences: 219361
Number of extensions: 1420878
Number of successful extensions: 4595
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4580
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)