ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast50e03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PI4KA_HUMAN (P42356) Phosphatidylinositol 4-kinase alpha (EC 2.7... 30 2.9
2SHAN3_RAT (Q9JLU4) SH3 and multiple ankyrin repeat domains 3 (Sh... 29 3.8
3CM35H_HUMAN (Q9UGN4) CMRF35-H antigen precursor (CMRF35-H9) (CMR... 28 6.6
4AP1G2_HUMAN (O75843) AP-1 complex subunit gamma-2 (Adapter-relat... 28 6.6
5OSBL7_HUMAN (Q9BZF2) Oxysterol-binding protein-related protein 7... 28 8.6

>PI4KA_HUMAN (P42356) Phosphatidylinositol 4-kinase alpha (EC 2.7.1.67)|
           (PI4-kinase alpha) (PtdIns-4-kinase alpha) (PI4K-alpha)
          Length = 2044

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
 Frame = +2

Query: 146 NQSPAAPTISPAELVRIKNSIRSAATPPDELAALFLK-GIPHTPFLGDRSIFSLAVSRLT 322
           N +    T++PAEL  ++++I +   PP E++AL  K     + +L   S++ L   R+ 
Sbjct: 790 NSAMKNDTVTPAELSELRSTIINLLDPPPEVSALINKLDFAMSTYL--LSVYRLEYMRVL 847

Query: 323 AAARPD 340
            +  PD
Sbjct: 848 RSTDPD 853



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>SHAN3_RAT (Q9JLU4) SH3 and multiple ankyrin repeat domains 3 (Shank3)|
           (Proline-rich synapse associated protein 2) (ProSAP2)
           (SPANK-2)
          Length = 1815

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = +2

Query: 137 STQNQSPAAPTISPAELVRIKNSIRSAATPPDELAALFLKGIPHTPFLG-DRSIFSLAVS 313
           +T  Q P +  I+PAE+  +    R     P++L     KGIP T  +G D  + SL   
Sbjct: 812 ATVKQRPTSRRITPAEISSLFE--RQGLPGPEKLPGSLRKGIPRTKSVGEDEKLASLLEG 869

Query: 314 R 316
           R
Sbjct: 870 R 870



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>CM35H_HUMAN (Q9UGN4) CMRF35-H antigen precursor (CMRF35-H9) (CMRF-35-H9)|
           (CD300a antigen) (Inhibitory receptor protein 60)
           (IRp60) (IRC1/IRC2) (NK inhibitory receptor)
          Length = 299

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 155 PAAPTISPAELVRIKNSIRSAATPPDELAALFLKGIPHT 271
           PA+ +++PA +   K S  + A PP     LF  G  H+
Sbjct: 126 PASTSMTPASITAAKTSTITTAFPPVSSTTLFAVGATHS 164



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>AP1G2_HUMAN (O75843) AP-1 complex subunit gamma-2 (Adapter-related protein|
           complex 1 gamma-2 subunit) (Gamma2-adaptin) (Adaptor
           protein complex AP-1 gamma-2 subunit) (G2ad)
          Length = 785

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 1   IALIDLACPPPPSKPFPD 54
           + L+DL C PPP  P PD
Sbjct: 652 VHLLDLPCVPPPPAPIPD 669



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>OSBL7_HUMAN (Q9BZF2) Oxysterol-binding protein-related protein 7 (OSBP-related|
           protein 7) (ORP-7)
          Length = 842

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = +2

Query: 227 PDELAALFLKGIPHTPFLGDRSIFSLAVS 313
           P+E  AL++KG   TP L   SI SLA S
Sbjct: 371 PEEQEALYMKGRELTPQLSQTSILSLADS 399


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.147    0.489 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,860,700
Number of Sequences: 219361
Number of extensions: 250979
Number of successful extensions: 881
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
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