| Clone Name | bast50e02 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL603842.9| Mouse DNA sequence from clone RP23-100P23 on chromosome 11 Contains the 5' end of a novel gene, three novel genes, the Slc6a4 gene for solute carrier family 6 (neurotransmitter transporter, serotonin) member 4, the Blmh gene for bleomycin hydrolase and three CpG islands, complete sequence Length = 229289 Score = 42.1 bits (21), Expect = 0.36 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 tcgtggtgatggtggtggcgg 121 ||||||||||||||||||||| Sbjct: 104995 tcgtggtgatggtggtggcgg 104975
>gb|AC150488.2| Bos taurus BAC CH240-466B8 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 135467 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcggg 122 |||||||||||||||||||| Sbjct: 71778 gtggtgatggtggtggcggg 71797
>ref|XM_532318.2| PREDICTED: Canis familiaris similar to TBP-associated factor 2 (LOC475084), mRNA Length = 3866 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 tgctcgtggtgatggtggtg 117 |||||||||||||||||||| Sbjct: 3519 tgctcgtggtgatggtggtg 3500
>gb|DQ127718.1| Emiliania huxleyi virus 163 clone new182.seq partial sequence Length = 545 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 gtggtgatggtggtggcggg 122 |||||||||||||||||||| Sbjct: 534 gtggtgatggtggtggcggg 515
>gb|AC151265.3| Mus musculus BAC clone RP24-372H7 from chromosome 17, complete sequence Length = 191739 Score = 40.1 bits (20), Expect = 1.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 atgctcgtggtgatggtggtggcg 120 ||||| |||||||||||||||||| Sbjct: 89682 atgctggtggtgatggtggtggcg 89705
>emb|AL669858.8| Mouse DNA sequence from clone RP23-51G7 on chromosome 11 Contains a ribosomal protein L15 (Rpl15) pseudogene, the Otx1 gene for orthodenticle homolog 1, the 3' end of a novel gene and two CpG islands, complete sequence Length = 240514 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 gtggtgatggtggtggcggg 122 |||||||||||||||||||| Sbjct: 49803 gtggtgatggtggtggcggg 49784
>gb|AC008304.3|AC008304 Drosophila melanogaster, chromosome 2R, region 59D2-59D3, BAC clone BACR04G19, complete sequence Length = 181955 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 gtggtgatggtggtggcggg 122 |||||||||||||||||||| Sbjct: 118708 gtggtgatggtggtggcggg 118689
>gb|AC158181.2| Selaginella moellendorffii clone JGIASXY-5D1, complete sequence Length = 34893 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcggg 122 |||||||||||||||||||| Sbjct: 14478 gtggtgatggtggtggcggg 14497
>gb|AE003460.2| Drosophila melanogaster chromosome 2R, section 68 of 73 of the complete sequence Length = 299331 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 gtggtgatggtggtggcggg 122 |||||||||||||||||||| Sbjct: 171185 gtggtgatggtggtggcggg 171166
>emb|CT010473.14| Mouse DNA sequence from clone RP23-238D5 on chromosome 17, complete sequence Length = 173998 Score = 40.1 bits (20), Expect = 1.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 atgctcgtggtgatggtggtggcg 120 ||||| |||||||||||||||||| Sbjct: 166173 atgctggtggtgatggtggtggcg 166196
>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome Length = 2519802 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cgtggtgatggtggtggcgg 121 |||||||||||||||||||| Sbjct: 287231 cgtggtgatggtggtggcgg 287250
>ref|NM_120193.1| Arabidopsis thaliana unknown protein AT5G01150 mRNA, complete cds Length = 1506 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 64 ggtttcaagatgatgataa 82 ||||||||||||||||||| Sbjct: 461 ggtttcaagatgatgataa 479
>ref|XM_637672.1| Dictyostelium discoideum hypothetical protein (DDB0169144), partial mRNA Length = 3372 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 632 gtggtgatggtggtggcgg 650
>ref|NM_189920.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 336 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 98 tgctcgtggtgatggtggt 116 ||||||||||||||||||| Sbjct: 35 tgctcgtggtgatggtggt 53
>gb|AC138204.7| Mus musculus chromosome 3, clone RP23-381G8, complete sequence Length = 173792 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 90355 gtggtgatggtggtggcgg 90373
>gb|AC156037.6| Mus musculus BAC clone RP23-138L1 from chromosome 12, complete sequence Length = 217016 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 106746 gtggtgatggtggtggcgg 106764
>gb|AY435041.1| Oryza sativa (indica cultivar-group) pathogenesis-related protein 4b (PR-4b) mRNA, complete cds Length = 739 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 71 gtggtgatggtggtggcgg 89
>ref|XM_653023.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0511.2), mRNA Length = 783 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 293 gtggtgatggtggtggcgg 275
>gb|AC116977.2| Dictyostelium discoideum chromosome 2 map 5515173-5817331 strain AX4, complete sequence Length = 302156 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 216393 gtggtgatggtggtggcgg 216375
>gb|AC145199.3| Mus musculus BAC clone RP23-173N12 from chromosome 7, complete sequence Length = 220892 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 13152 gtggtgatggtggtggcgg 13170
>ref|XM_883456.1| Leishmania major strain Friedlin hypothetical protein (L2743.03) partial mRNA Length = 2574 Score = 38.2 bits (19), Expect = 5.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 98 tgctcgtggtgatggtggtggcg 120 ||||||||||||||||| ||||| Sbjct: 2109 tgctcgtggtgatggtgatggcg 2131
>emb|CR974572.21| Pig DNA sequence from clone CH242-200F24 on chromosome 17, complete sequence Length = 137431 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 ctactcacacaacaggagg 38 ||||||||||||||||||| Sbjct: 8357 ctactcacacaacaggagg 8339
>ref|XM_823639.1| Trypanosoma brucei TREU927 hypothetical protein (Tb11.02.4430) partial mRNA Length = 2142 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 1520 gtggtgatggtggtggcgg 1538
>emb|AL389894.4|LMFLCHR4A Leishmania major Friedlin chromosome 4, left end Length = 225394 Score = 38.2 bits (19), Expect = 5.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 98 tgctcgtggtgatggtggtggcg 120 ||||||||||||||||| ||||| Sbjct: 111279 tgctcgtggtgatggtgatggcg 111301
>gb|AC123808.3| Mus musculus BAC clone RP24-165O16 from chromosome 12, complete sequence Length = 147844 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 85778 gtggtgatggtggtggcgg 85796
>gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0074L11, complete sequence Length = 180703 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 4101 gtggtgatggtggtggcgg 4119
>gb|AC109261.7| Mus musculus chromosome 17, clone RP23-23D19, complete sequence Length = 227994 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 4578 gtggtgatggtggtggcgg 4596
>gb|AC153662.6| Mus musculus BAC clone RP23-24I10 from chromosome 12, complete sequence Length = 216041 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 53461 gtggtgatggtggtggcgg 53479
>gb|DQ127667.1| Emiliania huxleyi virus 163 clone combi126+127.seq partial sequence Length = 861 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 420 gtggtgatggtggtggcgg 402
>emb|AL691459.25| Human DNA sequence from clone RP11-543D5 on chromosome 1 Contains four novel genes and a CpG island, complete sequence Length = 139890 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 74786 gtggtgatggtggtggcgg 74804
>emb|AL359979.10| Human DNA sequence from clone RP11-239E10 on chromosome 1 Contains the 5' end of the TLR5 gene for toll-like receptor 5, two novel genes, the gene for a novel protein (FLJ10052) and a CpG island, complete sequence Length = 181466 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 12641 gtggtgatggtggtggcgg 12659
>emb|AL160006.16| Human DNA sequence from clone RP4-773N10 on chromosome 1p13.1-13.3 Contains the 3' end of gene KIAA1761 (FLJ14743) and the ALX3 gene for aristaless-like homeobox 3, complete sequence Length = 91783 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 66859 gtggtgatggtggtggcgg 66841
>emb|X81045.1|SSXLNG Streptomyces sp. xln gene for xylanase Length = 1080 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 244 gtggtgatggtggtggcgg 226
>emb|AL137189.2|ATF7J8 Arabidopsis thaliana DNA chromosome 5, BAC clone F7J8 (ESSA project) Length = 118507 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 64 ggtttcaagatgatgataa 82 ||||||||||||||||||| Sbjct: 47865 ggtttcaagatgatgataa 47883
>gb|AC100183.11| Mus musculus chromosome 3, clone RP23-54L16, complete sequence Length = 231917 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 147940 gtggtgatggtggtggcgg 147922
>gb|AC010069.9| Drosophila melanogaster 3L BAC RP98-17C18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 166352 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 104 tggtgatggtggtggcggg 122 ||||||||||||||||||| Sbjct: 82780 tggtgatggtggtggcggg 82798
>dbj|AP006336.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT07E09, TM0293, complete sequence Length = 113091 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 102 cgtggtgatggtggtggcg 120 ||||||||||||||||||| Sbjct: 98140 cgtggtgatggtggtggcg 98158
>gb|AC020907.6| Homo sapiens chromosome 19 clone CTD-2527I21, complete sequence Length = 169891 Score = 38.2 bits (19), Expect = 5.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 96 aatgctcgtggtgatggtggtgg 118 |||||| |||||||||||||||| Sbjct: 118956 aatgcttgtggtgatggtggtgg 118934
>gb|AC063949.21| Homo sapiens 12 BAC RP11-693J15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172984 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 28728 gtggtgatggtggtggcgg 28746
>ref|NM_169403.1| Drosophila melanogaster CG6791-RA, transcript variant A (CG6791), mRNA Length = 3766 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 2385 gtggtgatggtggtggcgg 2367
>ref|NM_141833.2| Drosophila melanogaster CG6791-RB, transcript variant B (CG6791), mRNA Length = 4334 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 2385 gtggtgatggtggtggcgg 2367
>gb|AY069506.1| Drosophila melanogaster LD22666 full length cDNA Length = 3016 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 1615 gtggtgatggtggtggcgg 1597
>gb|AY069655.1| Drosophila melanogaster LD43035 full length cDNA Length = 4346 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 2379 gtggtgatggtggtggcgg 2361
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 38.2 bits (19), Expect = 5.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 86 gccggtggagaatgctcgtggtg 108 |||||||||| |||||||||||| Sbjct: 195999 gccggtggagcatgctcgtggtg 196021
>ref|XM_687822.1| PREDICTED: Danio rerio si:dkey-105o6.2 (si:dkey-105o6.2), mRNA Length = 2636 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 1481 gtggtgatggtggtggcgg 1463
>gb|AC159477.9| Mus musculus 10 BAC RP23-95I8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222553 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 103757 gtggtgatggtggtggcgg 103775
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 cacaacaggaggtagctct 45 ||||||||||||||||||| Sbjct: 590318 cacaacaggaggtagctct 590336
>gb|AC158515.2| Mus musculus BAC clone RP24-487D11 from chromosome 9, complete sequence Length = 176590 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 38627 gtggtgatggtggtggcgg 38609
>gb|AC013447.4|AC013447 Homo sapiens BAC clone RP11-543D5 from 1, complete sequence Length = 166143 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 100638 gtggtgatggtggtggcgg 100656
>gb|AC159329.8| Mus musculus 10 BAC RP23-205H9 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 213287 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 90685 gtggtgatggtggtggcgg 90703
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 21652048 gtggtgatggtggtggcgg 21652066
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 tcgtggtgatggtggtggc 119 ||||||||||||||||||| Sbjct: 3546023 tcgtggtgatggtggtggc 3546041
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 24117219 gtggtgatggtggtggcgg 24117201
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 104 tggtgatggtggtggcggg 122 ||||||||||||||||||| Sbjct: 31393471 tggtgatggtggtggcggg 31393453
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 98 tgctcgtggtgatggtggt 116 ||||||||||||||||||| Sbjct: 39830010 tgctcgtggtgatggtggt 39830028 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 7 gcgttgaggccagctactc 25 ||||||||||||||||||| Sbjct: 12121964 gcgttgaggccagctactc 12121982
>gb|AC113484.14| Mus musculus chromosome 8, clone RP23-343H23, complete sequence Length = 176303 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 45917 gtggtgatggtggtggcgg 45935
>gb|AC009740.4|AC009740 Drosophila melanogaster, chromosome 3R, region 86E-86E, BAC clone BACR24C01, complete sequence Length = 181480 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 103335 gtggtgatggtggtggcgg 103353
>gb|AC139676.3| Homo sapiens chromosome 8, clone RP13-648O9, complete sequence Length = 166153 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 55625 gtggtgatggtggtggcgg 55643 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 55455 gtggtgatggtggtggcgg 55473 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 55282 gtggtgatggtggtggcgg 55300
>gb|AC104801.4| Homo sapiens BAC clone RP11-356J12 from 2, complete sequence Length = 132644 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 15194 gtggtgatggtggtggcgg 15176
>dbj|AP003433.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0004D12 Length = 138136 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 98 tgctcgtggtgatggtggt 116 ||||||||||||||||||| Sbjct: 10718 tgctcgtggtgatggtggt 10736
>dbj|AP003436.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0470A12 Length = 185095 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 98 tgctcgtggtgatggtggt 116 ||||||||||||||||||| Sbjct: 180909 tgctcgtggtgatggtggt 180927
>dbj|AP005733.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0024K03 Length = 119796 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 104 tggtgatggtggtggcggg 122 ||||||||||||||||||| Sbjct: 76045 tggtgatggtggtggcggg 76027
>dbj|AP003414.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1153F04 Length = 158174 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 7 gcgttgaggccagctactc 25 ||||||||||||||||||| Sbjct: 88904 gcgttgaggccagctactc 88922
>dbj|AP003711.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417G12 Length = 163568 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 50677 gtggtgatggtggtggcgg 50659
>dbj|AP003626.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0429G06 Length = 158321 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 126912 gtggtgatggtggtggcgg 126894
>dbj|BS000234.1| Pan troglodytes chromosome 22 clone:PTB-190I13, map 22, complete sequences Length = 174520 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 22379 gtggtgatggtggtggcgg 22397
>dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0078N11 Length = 155168 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 104 tggtgatggtggtggcggg 122 ||||||||||||||||||| Sbjct: 28868 tggtgatggtggtggcggg 28850
>gb|AC153537.4| Mus musculus 10 BAC RP23-283A2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 221267 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 21076 gtggtgatggtggtggcgg 21094
>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0577B11 Length = 180355 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 tcgtggtgatggtggtggc 119 ||||||||||||||||||| Sbjct: 24529 tcgtggtgatggtggtggc 24547
>dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0672D01 Length = 146954 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 tcgtggtgatggtggtggc 119 ||||||||||||||||||| Sbjct: 101740 tcgtggtgatggtggtggc 101758
>gb|BC091801.1| Danio rerio cDNA clone IMAGE:7139974 Length = 1860 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 1488 gtggtgatggtggtggcgg 1470
>ref|NM_210192.1| Eremothecium gossypii AEL023Cp (AEL023C), mRNA Length = 4377 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 27 cacaacaggaggtagctct 45 ||||||||||||||||||| Sbjct: 4008 cacaacaggaggtagctct 3990
>emb|BX537168.4| Zebrafish DNA sequence from clone DKEY-105O6 in linkage group 4, complete sequence Length = 200744 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 63257 gtggtgatggtggtggcgg 63275
>dbj|AK063234.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-F08, full insert sequence Length = 730 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 91 gtggtgatggtggtggcgg 109
>emb|AL117200.2|CEY50E8A Caenorhabditis elegans YAC Y50E8A, complete sequence Length = 61864 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 19623 gtggtgatggtggtggcgg 19641
>gb|AC007198.6|AC007198 Homo sapiens, clone 18_A_13, complete sequence Length = 166977 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 139831 gtggtgatggtggtggcgg 139813
>gb|AE003692.3| Drosophila melanogaster chromosome 3R, section 30 of 118 of the complete sequence Length = 227847 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 64351 gtggtgatggtggtggcgg 64369
>emb|AL110505.5|CNS01DRA Human chromosome 14 DNA sequence BAC R-816J8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 198441 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 61 gtgggtttcaagatgatga 79 ||||||||||||||||||| Sbjct: 5897 gtgggtttcaagatgatga 5879
>gb|AE003524.5| Drosophila melanogaster chromosome 3L, section 61 of 83 of the complete sequence Length = 425677 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 104 tggtgatggtggtggcggg 122 ||||||||||||||||||| Sbjct: 43651 tggtgatggtggtggcggg 43633
>dbj|AP001712.1| Homo sapiens genomic DNA, chromosome 21q, section 56/105 Length = 340000 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 88381 gtggtgatggtggtggcgg 88363 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 88252 gtggtgatggtggtggcgg 88234
>gb|AC099715.9| Mus musculus chromosome 10, clone RP23-346B18, complete sequence Length = 206811 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 175805 gtggtgatggtggtggcgg 175823
>gb|AC138677.8| Mus musculus chromosome 8, clone RP23-366O14, complete sequence Length = 208995 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 166470 gtggtgatggtggtggcgg 166488
>emb|AJ890364.1| Emiliania huxleyi virus 86 isolate EhV86 Length = 407339 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 198380 gtggtgatggtggtggcgg 198398 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 198212 gtggtgatggtggtggcgg 198230 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 189142 gtggtgatggtggtggcgg 189124 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 127997 gtggtgatggtggtggcgg 127979 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 60408 gtggtgatggtggtggcgg 60426
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 21962247 gtggtgatggtggtggcgg 21962265
>emb|AL672123.16| Mouse DNA sequence from clone RP23-436I3 on chromosome X, complete sequence Length = 219385 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 94210 gtggtgatggtggtggcgg 94228
>emb|CT010509.10| Mouse DNA sequence from clone RP23-63E8 on chromosome 9, complete sequence Length = 258170 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 96782 gtggtgatggtggtggcgg 96800
>gb|AC163731.2| Mus musculus BAC clone RP23-380F10 from chromosome 17, complete sequence Length = 185201 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 48909 gtggtgatggtggtggcgg 48891
>gb|AY520899.1| Lactarius mammosus clone AAT94 microsatellite sequence Length = 275 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 228 gtggtgatggtggtggcgg 210
>dbj|AP004520.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT05P01, TM0048, complete sequence Length = 110811 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 72760 gtggtgatggtggtggcgg 72742
>emb|AL358339.2|CNS05TEA Human chromosome 14 DNA sequence BAC C-3172B5 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 87937 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 61 gtgggtttcaagatgatga 79 ||||||||||||||||||| Sbjct: 79318 gtgggtttcaagatgatga 79300
>dbj|AP000466.1| Homo sapiens genomic DNA, chromosome 21q22.1, clone:B140B9, complete sequence Length = 119580 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 31658 gtggtgatggtggtggcgg 31640 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gtggtgatggtggtggcgg 121 ||||||||||||||||||| Sbjct: 31529 gtggtgatggtggtggcgg 31511 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,318,548 Number of Sequences: 3902068 Number of extensions: 1318548 Number of successful extensions: 81132 Number of sequences better than 10.0: 91 Number of HSP's better than 10.0 without gapping: 92 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 80415 Number of HSP's gapped (non-prelim): 717 length of query: 122 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 101 effective length of database: 17,151,101,840 effective search space: 1732261285840 effective search space used: 1732261285840 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)