ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast50d06 |
|---|---|
| Clone Library Name | barley_pub |
>WRK40_ARATH (Q9SAH7) Probable WRKY transcription factor 40 (WRKY DNA-binding| protein 40) Length = 302 Score = 39.7 bits (91), Expect = 0.004 Identities = 19/48 (39%), Positives = 28/48 (58%) Frame = +2 Query: 302 MPLKKDPEVAVLESELQRVSEENRRLGEMLREVASKYEALQGQFTDMV 445 M +++DP + L EL RVS EN++L EML + Y L+ Q + V Sbjct: 22 MRVEEDPPTSALVEELNRVSAENKKLSEMLTLMCDNYNVLRKQLMEYV 69
>WRK60_ARATH (Q9SK33) Probable WRKY transcription factor 60 (WRKY DNA-binding| protein 60) Length = 271 Score = 37.4 bits (85), Expect = 0.018 Identities = 18/45 (40%), Positives = 27/45 (60%) Frame = +2 Query: 308 LKKDPEVAVLESELQRVSEENRRLGEMLREVASKYEALQGQFTDM 442 L KD + +L+ E+ RV+ EN++L EML V KY AL ++ Sbjct: 36 LVKDEKRNMLQDEINRVNSENKKLTEMLARVCEKYYALNNLMEEL 80
>AMOT_HUMAN (Q4VCS5) Angiomotin| Length = 1084 Score = 35.4 bits (80), Expect = 0.067 Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 11/108 (10%) Frame = +2 Query: 152 DPWMGSQPSLSLDLHVGLPPMGHPHHHQSQYQAPPM---------IALAKPKILVEENFM 304 D + SQP LS H HHHQ Q Q P + A+P ++ Sbjct: 365 DHYRLSQPGLSQQQQQQQQQHHHHHHHQQQQQQQPQQQPGEAYSAMPRAQPS---SASYQ 421 Query: 305 PLKKDPEVAVLESE--LQRVSEENRRLGEMLREVASKYEALQGQFTDM 442 P+ DP V ++ ++ +S+ENR L + L K LQ T++ Sbjct: 422 PVPADPFAIVSRAQQMVEILSDENRNLRQELEGCYEKVARLQKVETEI 469
>WRK18_ARATH (Q9C5T4) WRKY transcription factor 18 (WRKY DNA-binding protein 18)| (AtWRKY18) Length = 310 Score = 34.3 bits (77), Expect = 0.15 Identities = 16/38 (42%), Positives = 22/38 (57%) Frame = +2 Query: 308 LKKDPEVAVLESELQRVSEENRRLGEMLREVASKYEAL 421 L++D + L EL RV+ EN++L EML V Y L Sbjct: 40 LEQDESASELREELNRVNSENKKLTEMLARVCESYNEL 77
>Y2353_STAES (Q8CQQ7) Protein SE_2353| Length = 300 Score = 34.3 bits (77), Expect = 0.15 Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 4/61 (6%) Frame = +2 Query: 278 KILVEENFMPLKKDPEVAVL----ESELQRVSEENRRLGEMLREVASKYEALQGQFTDMV 445 +++V++ L D VA L SE+Q++ EE + LG+M+ +V + + L+ TD+ Sbjct: 80 QVIVKDEDSQLPTDQNVAQLVEDLRSEIQKMREERQMLGQMINQVHQQQQELKELQTDIT 139 Query: 446 T 448 T Sbjct: 140 T 140
>WRK31_ARATH (Q93WT0) Probable WRKY transcription factor 31 (WRKY DNA-binding| protein 31) Length = 538 Score = 31.6 bits (70), Expect = 0.97 Identities = 15/36 (41%), Positives = 24/36 (66%) Frame = +2 Query: 323 EVAVLESELQRVSEENRRLGEMLREVASKYEALQGQ 430 E A L+ EL+++ EN+RL +ML + + + ALQ Q Sbjct: 110 ENAQLQEELKKMKIENQRLRDMLSQATTNFNALQMQ 145
>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 30.8 bits (68), Expect = 1.7 Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 7/50 (14%) Frame = +1 Query: 316 GP*GCGS*VGATAGERGEPA-------AGRDAQGGGLQVRGPAGPVHRHG 444 GP G G AGERG P AG+D + G GPAGP G Sbjct: 573 GPKGTAGEPGK-AGERGVPGPPGAVGPAGKDGEAGAQGAPGPAGPAGERG 621
>MAFB_RAT (P54842) Transcription factor MafB (V-maf musculoaponeurotic| fibrosarcoma oncogene homolog B) (Transcription factor MAF1) Length = 323 Score = 30.8 bits (68), Expect = 1.7 Identities = 12/28 (42%), Positives = 14/28 (50%) Frame = +2 Query: 194 HVGLPPMGHPHHHQSQYQAPPMIALAKP 277 H L P HPHHH +PP + A P Sbjct: 152 HDELGPHAHPHHHHHHQASPPPSSAASP 179
>MAFB_HUMAN (Q9Y5Q3) Transcription factor MafB (V-maf musculoaponeurotic| fibrosarcoma oncogene homolog B) Length = 323 Score = 30.8 bits (68), Expect = 1.7 Identities = 12/28 (42%), Positives = 14/28 (50%) Frame = +2 Query: 194 HVGLPPMGHPHHHQSQYQAPPMIALAKP 277 H L P HPHHH +PP + A P Sbjct: 152 HDELGPHAHPHHHHHHQASPPPSSAASP 179
>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 30.4 bits (67), Expect = 2.2 Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 7/50 (14%) Frame = +1 Query: 316 GP*GCGS*VGATAGERGEPA-------AGRDAQGGGLQVRGPAGPVHRHG 444 GP G G AGERG P AG+D + G GPAGP G Sbjct: 573 GPKGTAGEPGK-AGERGLPGPPGAVGPAGKDGEAGAQGAPGPAGPAGERG 621
>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor| Length = 1460 Score = 30.4 bits (67), Expect = 2.2 Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 7/50 (14%) Frame = +1 Query: 316 GP*GCGS*VGATAGERGEPA-------AGRDAQGGGLQVRGPAGPVHRHG 444 GP G G AGERG P AG+D + G GPAGP G Sbjct: 580 GPKGAAGEPGK-AGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERG 628
>IF2_BIFLO (Q8G3Y5) Translation initiation factor IF-2| Length = 954 Score = 30.4 bits (67), Expect = 2.2 Identities = 16/36 (44%), Positives = 17/36 (47%) Frame = +1 Query: 343 GATAGERGEPAAGRDAQGGGLQVRGPAGPVHRHGHG 450 GA G RG G + QGGG GPA R G G Sbjct: 276 GARGGFRGGQGGGNNFQGGGAPSNGPARGGGRGGRG 311
>EBNA1_EBV (P03211) Epstein-Barr nuclear antigen 1 (EBV nuclear antigen 1)| (EBNA-1) Length = 641 Score = 30.4 bits (67), Expect = 2.2 Identities = 21/54 (38%), Positives = 24/54 (44%) Frame = +1 Query: 289 GGELHAAQEGP*GCGS*VGATAGERGEPAAGRDAQGGGLQVRGPAGPVHRHGHG 450 GG A G G G+ GA AG G GR G G + RG +G R G G Sbjct: 298 GGAGGAGAGGAGGAGAGGGAGAGGAGAGGGGRGRGGSGGRGRGGSGGRGRGGSG 351
>CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor| Length = 1464 Score = 30.4 bits (67), Expect = 2.2 Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 7/50 (14%) Frame = +1 Query: 316 GP*GCGS*VGATAGERGEPA-------AGRDAQGGGLQVRGPAGPVHRHG 444 GP G G AGERG P AG+D + G GPAGP G Sbjct: 584 GPKGAAGEPGK-AGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERG 632
>SYT3_RAT (P40748) Synaptotagmin-3 (Synaptotagmin III) (SytIII)| Length = 588 Score = 30.4 bits (67), Expect = 2.2 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 5/50 (10%) Frame = +2 Query: 200 GLPPMGHPHHHQSQYQAPPMIALAKPKIL-----VEENFMPLKKDPEVAV 334 G P +G PHHH PP L +P L E +++ + PE AV Sbjct: 124 GHPLLGGPHHHAHPAHHPPFAELLEPGGLGGSEPPEPSYLDMDSYPEAAV 173
>CO1A1_BOVIN (P02453) Collagen alpha-1(I) chain (Fragments)| Length = 779 Score = 30.4 bits (67), Expect = 2.2 Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 7/50 (14%) Frame = +1 Query: 316 GP*GCGS*VGATAGERGEPA-------AGRDAQGGGLQVRGPAGPVHRHG 444 GP G G AGERG P AG+D + G GPAGP G Sbjct: 149 GPKGAAGEPGK-AGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERG 197
>TYY1_HUMAN (P25490) Transcriptional repressor protein YY1 (Yin and yang 1)| (YY-1) (Delta transcription factor) (NF-E1) Length = 414 Score = 30.0 bits (66), Expect = 2.8 Identities = 11/18 (61%), Positives = 12/18 (66%) Frame = +2 Query: 215 GHPHHHQSQYQAPPMIAL 268 GH HHH + PPMIAL Sbjct: 69 GHHHHHHHHHHHPPMIAL 86
>SYT3_MOUSE (O35681) Synaptotagmin-3 (Synaptotagmin III) (SytIII)| Length = 587 Score = 30.0 bits (66), Expect = 2.8 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 5/50 (10%) Frame = +2 Query: 200 GLPPMGHPHHHQSQYQAPPMIALAKPKIL-----VEENFMPLKKDPEVAV 334 G P +G PHHH PP L +P L E +++ + PE AV Sbjct: 124 GHPLLGGPHHHGHTAHHPPFAELLEPGGLGGSEPPEPSYLDMDSYPEAAV 173
>SYT3_HUMAN (Q9BQG1) Synaptotagmin-3 (Synaptotagmin III) (SytIII)| Length = 590 Score = 29.6 bits (65), Expect = 3.7 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 5/49 (10%) Frame = +2 Query: 200 GLPPMGHPHHHQSQYQAPPMIALAKPKIL-----VEENFMPLKKDPEVA 331 G P +G PHHH PP L +P L E +++ + PE A Sbjct: 123 GHPLLGGPHHHAHAAHHPPFAELLEPGSLGGSDTPEPSYLDMDSYPEAA 171
>CO1A2_ONCMY (O93484) Collagen alpha-2(I) chain precursor| Length = 1356 Score = 29.6 bits (65), Expect = 3.7 Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Frame = +1 Query: 310 QEGP*GCGS*VGATAGERGEPA-AGRDAQGGGLQVRGPAGPVHRHGHG 450 + GP G G VGA G RG P AG + GG +G G GHG Sbjct: 974 ESGPTGNGGPVGA-VGARGAPGPAGPRGEKGGAGEKGDRGMKGLRGHG 1020
>DBF4_HUMAN (Q9UBU7) Protein DBF4 homolog (Activator of S phase Kinase)| Length = 674 Score = 29.3 bits (64), Expect = 4.8 Identities = 13/44 (29%), Positives = 24/44 (54%) Frame = +2 Query: 218 HPHHHQSQYQAPPMIALAKPKILVEENFMPLKKDPEVAVLESEL 349 HP H S +++P + L++ K+LVE+ P ++L + L Sbjct: 120 HPSHDGSSFKSPDTVCLSRGKLLVEKAIKDHDFIPSNSILSNAL 163
>CO5A1_HUMAN (P20908) Collagen alpha-1(V) chain precursor| Length = 1838 Score = 29.3 bits (64), Expect = 4.8 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 7/34 (20%) Frame = +1 Query: 352 AGERGEPA-------AGRDAQGGGLQVRGPAGPV 432 AGE+G P AGRD G + + GPAGPV Sbjct: 1116 AGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPV 1149
>RAD50_METKA (Q8TXI4) DNA double-strand break repair rad50 ATPase| Length = 876 Score = 29.3 bits (64), Expect = 4.8 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Frame = +2 Query: 251 PPMIALAKPKIL-VEENFMPLKKDPEVAVLESELQRVSEENRRLGEMLREVASKYEALQG 427 P + K KI+ E L+++ E L+ +L++VS+E LG+ + S+YE LQ Sbjct: 343 PERLVEFKDKIVEASERLRDLRREEE---LKRKLEKVSDELSELGDREETLQSEYEELQE 399 Query: 428 QFTDM 442 + ++ Sbjct: 400 RLDEI 404
>CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor| Length = 1364 Score = 29.3 bits (64), Expect = 4.8 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%) Frame = +1 Query: 355 GERGEPA-AGRDAQGGGLQVRGPAGPVHRHGH 447 GERG P AG G +GP GPV +HG+ Sbjct: 944 GERGYPGNAGPVGAAGAPGPQGPVGPVGKHGN 975
>FUCO_HUMAN (P04066) Tissue alpha-L-fucosidase precursor (EC 3.2.1.51)| (Alpha-L-fucosidase I) (Alpha-L-fucoside fucohydrolase) Length = 461 Score = 29.3 bits (64), Expect = 4.8 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%) Frame = -3 Query: 255 GGAWYWLWWWCGCPIGGRPTCRSRLRDGWLP--IHGSIGPSNTTRW 124 G W+W W W G GRP + +RD + P + GP T R+ Sbjct: 68 GSEWFW-WHWQG---EGRPQYQRFMRDNYPPGFSYADFGPQFTARF 109
>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor| Length = 1464 Score = 29.3 bits (64), Expect = 4.8 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%) Frame = +1 Query: 355 GERGEPA-AGRDAQGGGLQVRGPAGPV 432 GE+GEP AG D G RGPAGP+ Sbjct: 740 GEKGEPGGAGADGVPGKDGPRGPAGPI 766
>CO5A1_RAT (Q9JI03) Collagen alpha-1(V) chain precursor| Length = 1840 Score = 29.3 bits (64), Expect = 4.8 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = +1 Query: 313 EGP*GCGS*VGATAGERGEPAAGRDAQGGGLQVRGPAGPV 432 +GP G G E + AGRD G + + GPAGPV Sbjct: 1112 QGPPGPAGEKGVPGEEGPQGPAGRDGLQGPVGLPGPAGPV 1151
>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor| Length = 1463 Score = 29.3 bits (64), Expect = 4.8 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%) Frame = +1 Query: 355 GERGEPA-AGRDAQGGGLQVRGPAGPV 432 GE+GEP AG D G RGPAGP+ Sbjct: 740 GEKGEPGGAGADGVPGKDGPRGPAGPI 766 Score = 28.9 bits (63), Expect = 6.3 Identities = 18/52 (34%), Positives = 23/52 (44%) Frame = +1 Query: 289 GGELHAAQEGP*GCGS*VGATAGERGEPAAGRDAQGGGLQVRGPAGPVHRHG 444 G + HA +GP G G+ G+ AG G L RGP GP +G Sbjct: 371 GPQGHAGAQGPPGPPGNNGSPGGKGEMGPAGIPGAPGLLGARGPPGPAGANG 422
>TCRG1_MOUSE (Q8CGF7) Transcription elongation regulator 1 (TATA box-binding| protein-associated factor 2S) (Transcription factor CA150) (p144) (Formin-binding protein 28) (FBP 28) Length = 1100 Score = 29.3 bits (64), Expect = 4.8 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = +2 Query: 146 PMDPWMGSQPSLSLDLHVGLPP-MGHPHHHQSQYQAPPMIALAKPKILVEENFMP 307 P DP M P G+PP MG PH + + PPM A+ P ++ MP Sbjct: 71 PFDPNMPPMPPPG-----GIPPPMGPPHLQRPPFMPPPMGAMPPPPGMMFPPGMP 120
>DPB2_CANGA (Q6FSK8) DNA polymerase epsilon subunit B (EC 2.7.7.7) (DNA| polymerase II subunit B) Length = 719 Score = 28.9 bits (63), Expect = 6.3 Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 11/111 (9%) Frame = +2 Query: 107 NIVRPFQRVVFEGPMDPWMGSQPSLSLDLHVGLPPMGHPHHHQSQYQA----------PP 256 NI+ V+ GP DPW+ SL + LP P H + P Sbjct: 499 NIINHTHVVLIPGPHDPWVS---LCSLGANGSLPQSSIPTHFSKRMNKICKNITWASNPT 555 Query: 257 MIA-LAKPKILVEENFMPLKKDPEVAVLESELQRVSEENRRLGEMLREVAS 406 IA L++ +L +NF+ L K ++ E +R + L E+ ++A+ Sbjct: 556 RIAYLSQEIVLFRDNFLELCKRHQILFPVVESKRAED----LAELEEQMAN 602
>YNL5_CAEEL (Q21955) Hypothetical protein R12B2.5| Length = 780 Score = 28.9 bits (63), Expect = 6.3 Identities = 17/58 (29%), Positives = 25/58 (43%) Frame = +2 Query: 83 VASNRKEVNIVRPFQRVVFEGPMDPWMGSQPSLSLDLHVGLPPMGHPHHHQSQYQAPP 256 +A + +NI Q G DP M + ++ + V P GHP + QY PP Sbjct: 429 IARKQDFLNIAPMSQNQNHMGMNDPMMNGEHAMLGNGQVPNPYGGHPGYGHQQYMGPP 486
>TCRG1_HUMAN (O14776) Transcription elongation regulator 1 (TATA box-binding| protein-associated factor 2S) (Transcription factor CA150) Length = 1098 Score = 28.9 bits (63), Expect = 6.3 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = +2 Query: 146 PMDPWMGSQPSLSLDLHVGLPP-MGHPHHHQSQYQAPPMIALAKPKILVEENFMP 307 P DP M P G+PP MG PH + + PPM ++ P ++ MP Sbjct: 71 PFDPNMPPMPPPG-----GIPPPMGPPHLQRPPFMPPPMSSMPPPPGMMFPPGMP 120
>VE2_BPV6 (Q705F3) Regulatory protein E2| Length = 435 Score = 28.9 bits (63), Expect = 6.3 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Frame = +1 Query: 301 HAAQEGP*GCGS*V--GATAGERGEPAAGRDAQGGGLQVR 414 HA Q P G+ G G RG+ GR GGG++VR Sbjct: 274 HARQRAPQDSGTNKSPGRQGGRRGDGGGGRGGGGGGVRVR 313
>EFTS_WOLSU (Q7MAK1) Elongation factor Ts (EF-Ts)| Length = 355 Score = 28.9 bits (63), Expect = 6.3 Identities = 16/46 (34%), Positives = 25/46 (54%) Frame = +2 Query: 263 ALAKPKILVEENFMPLKKDPEVAVLESELQRVSEENRRLGEMLREV 400 A KP++L E P E L +EL++ +EE +RLG+ L + Sbjct: 193 AAMKPQVLSYEELDPEFITKEKVALIAELEKENEELKRLGKPLHRI 238
>CPO_DROME (Q01617) Protein couch potato| Length = 738 Score = 28.9 bits (63), Expect = 6.3 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = +2 Query: 209 PMGHPHHHQSQYQAPPMIALA 271 P+ HPHHHQ + P A A Sbjct: 168 PISHPHHHQLSFAHPTQFAAA 188
>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 28.9 bits (63), Expect = 6.3 Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 7/50 (14%) Frame = +1 Query: 316 GP*GCGS*VGATAGERGEP-------AAGRDAQGGGLQVRGPAGPVHRHG 444 GP G G GERG P AAG+D + G GP GP G Sbjct: 573 GPKGAAGEPGKP-GERGAPGPPGAVGAAGKDGEAGAQGPPGPTGPAGERG 621
>HXA1_HETFR (Q9IA19) Homeobox protein Hox-A1| Length = 326 Score = 28.9 bits (63), Expect = 6.3 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +2 Query: 179 LSLDLHVGLPPMGHPHHHQSQYQAPPMIALA 271 +S + +G PP H HHHQS Y P + ++ Sbjct: 54 VSRSVQIGAPPPHH-HHHQSNYTHPNNLGIS 83
>HAP1_HUMAN (P54257) Huntingtin-associated protein 1 (HAP-1) (Neuroan 1)| Length = 671 Score = 28.9 bits (63), Expect = 6.3 Identities = 15/52 (28%), Positives = 30/52 (57%) Frame = +2 Query: 275 PKILVEENFMPLKKDPEVAVLESELQRVSEENRRLGEMLREVASKYEALQGQ 430 PK++ +E + P++ L+ +L+ + EEN + LRE AS+ + L+ + Sbjct: 297 PKLISQEALLHQHHCPQLEALQEKLRLLEEENHQ----LREEASQLDTLEDE 344
>CO5A1_CRILO (Q60467) Collagen alpha-1(V) chain precursor| Length = 1840 Score = 28.9 bits (63), Expect = 6.3 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 7/34 (20%) Frame = +1 Query: 352 AGERGEPA-------AGRDAQGGGLQVRGPAGPV 432 AGE+G P AGRD G + + GPAGPV Sbjct: 1118 AGEKGVPGEKGPQGPAGRDGLQGPVGLPGPAGPV 1151
>COFA1_MOUSE (O35206) Collagen alpha-1(XV) chain precursor [Contains: Endostatin| (Endostatin-XV)] Length = 1367 Score = 28.5 bits (62), Expect = 8.2 Identities = 13/31 (41%), Positives = 15/31 (48%) Frame = +1 Query: 355 GERGEPAAGRDAQGGGLQVRGPAGPVHRHGH 447 GE+GE A + G GP GP R GH Sbjct: 752 GEKGEQGAKGERGADGTSTMGPPGPRGRPGH 782
>CO5A1_MOUSE (O88207) Collagen alpha-1(V) chain precursor| Length = 1838 Score = 28.5 bits (62), Expect = 8.2 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 7/34 (20%) Frame = +1 Query: 352 AGERGEPA-------AGRDAQGGGLQVRGPAGPV 432 AGE+G P AGRD G + + GPAGPV Sbjct: 1116 AGEKGLPGEKGPQGPAGRDGLQGPVGLPGPAGPV 1149
>KIF12_HUMAN (Q96FN5) Kinesin-like protein KIF12| Length = 646 Score = 28.5 bits (62), Expect = 8.2 Identities = 16/41 (39%), Positives = 24/41 (58%) Frame = +2 Query: 305 PLKKDPEVAVLESELQRVSEENRRLGEMLREVASKYEALQG 427 P+ K P+ LE+E+ ++ EENRRL L ++ K L G Sbjct: 370 PVAKQPQR--LETEMLQLQEENRRLQFQLDQMDCKASGLSG 408
>CO2A1_BOVIN (P02459) Collagen alpha-1(II) chain precursor (Fragments)| Length = 747 Score = 28.5 bits (62), Expect = 8.2 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 7/50 (14%) Frame = +1 Query: 316 GP*GCGS*VGATAGERGEPAA-------GRDAQGGGLQVRGPAGPVHRHG 444 GP G G AGE+G P A G+D + G GPAGP G Sbjct: 421 GPKGANGEPGK-AGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERG 469
>LPXB_AQUAE (O67420) Lipid-A-disaccharide synthase (EC 2.4.1.182)| Length = 356 Score = 28.5 bits (62), Expect = 8.2 Identities = 15/66 (22%), Positives = 29/66 (43%) Frame = +2 Query: 242 YQAPPMIALAKPKILVEENFMPLKKDPEVAVLESELQRVSEENRRLGEMLREVASKYEAL 421 Y P++ L KP+ EE KK+P +L S + + L ++ E+ ++ + Sbjct: 155 YVGHPLVDLVKPQKTKEEFMKAFKKEPLPLLLGSREGEIRRHVKLLKGIIEELKKSFDVI 214 Query: 422 QGQFTD 439 F + Sbjct: 215 SPTFRE 220
>Y078_THEAC (Q9HLZ5) UPF0284 protein Ta0078| Length = 341 Score = 28.5 bits (62), Expect = 8.2 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = +2 Query: 272 KPKILVEENFMPLKKDPEVAVLESELQRVSEENRRLGEML 391 +PK E ++ +DP + E +RV E RRLG++L Sbjct: 106 RPKTAFFETYIEPSRDPGLDRAVMEAERVMEAGRRLGKIL 145
>PLS1_RAT (P58195) Phospholipid scramblase 1 (PL scramblase 1)| (Ca(2+)-dependent phospholipid scramblase 1) Length = 335 Score = 28.5 bits (62), Expect = 8.2 Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%) Frame = +2 Query: 137 FEGPMDPWMGSQPSLSLD--LHVGLPPMGHPHHHQSQYQAP 253 + GP P+ G QP + + G P G P HQ Y P Sbjct: 54 YAGPQGPYPGPQPGYPVPPGSYAGGDPSGFPVQHQPAYNHP 94 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,448,221 Number of Sequences: 219361 Number of extensions: 880166 Number of successful extensions: 4710 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 4135 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4673 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
