ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast50d04 |
|---|---|
| Clone Library Name | barley_pub |
>SEC9_KLULA (Q6CSD1) Protein transport protein SEC9| Length = 556 Score = 36.2 bits (82), Expect = 0.037 Identities = 30/118 (25%), Positives = 40/118 (33%), Gaps = 12/118 (10%) Frame = +2 Query: 104 SRDEPDDFDEFDSTPYGGG----YDLFVTFGRPLPPSDETCYPCSAPSTSYDAPHYAAEE 271 S D + DS+PYG YD + PL ++ P + + SY Y + Sbjct: 113 SNDNASPYGNSDSSPYGNASASPYD--TGYNAPLQQNNN---PYGSMNNSYSNKSYGSNS 167 Query: 272 --------PSPYAHHQKPQPAYGFRPQNEXXXXXXXPSYGDSGYGSKPKPQPAYGFRP 421 PSP A A G RP N YG + Y + GF P Sbjct: 168 YSGDTYASPSPQASSSNNNGATGQRPSNPYANMNSQDPYGTNSYSNSGSVNAYKGFTP 225
>PO2F2_MOUSE (Q00196) POU domain, class 2, transcription factor 2| (Octamer-binding transcription factor 2) (Oct-2) (OTF-2) (Lymphoid-restricted immunoglobulin octamer-binding protein NF-A2) Length = 462 Score = 33.5 bits (75), Expect = 0.24 Identities = 22/76 (28%), Positives = 28/76 (36%), Gaps = 5/76 (6%) Frame = +2 Query: 218 PCSAPSTSYDAP--HYAAEEPSPYAHHQKPQ---PAYGFRPQNEXXXXXXXPSYGDSGYG 382 P A S D+P H E P +HQ PQ + P GDS Sbjct: 15 PLEAEKQSLDSPSEHTDTERNGPDINHQNPQNKASPFSVSPTGPSTKIKAEDPSGDSAPA 74 Query: 383 SKPKPQPAYGFRPRGR 430 + P PQPA P+ + Sbjct: 75 APPPPQPAQPHLPQAQ 90
>BRO1_CRYNE (Q5KE13) Vacuolar protein-sorting protein BRO1 (BRO domain-containing| protein 1) Length = 957 Score = 33.1 bits (74), Expect = 0.31 Identities = 26/96 (27%), Positives = 36/96 (37%), Gaps = 8/96 (8%) Frame = +2 Query: 146 PYGGGYDL-----FVTFGRPLPPSDETCYPCSAPSTSYDAPHYAAEEPSPYAHHQKPQPA 310 P YD F +F P S + YP S P +Y+ Y + +PY +P Sbjct: 834 PQSNPYDFSTLAGFGSFATPSVSSPQHVYP-SQPQQAYNQQSYIPPQQNPYYPPPPSRPT 892 Query: 311 YG---FRPQNEXXXXXXXPSYGDSGYGSKPKPQPAY 409 Y F PQ P G+ +P+ QP Y Sbjct: 893 YASPPFAPQQPPMQSGHSPYAPPPGHAPQPQ-QPQY 927 Score = 32.7 bits (73), Expect = 0.41 Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 12/76 (15%) Frame = +2 Query: 191 LPPSDETCYPCSAPSTSYDAPHYAAEEP------SPYA----HHQKP-QPAYGFRPQNEX 337 +PP YP +Y +P +A ++P SPYA H +P QP Y + Sbjct: 876 IPPQQNPYYPPPPSRPTYASPPFAPQQPPMQSGHSPYAPPPGHAPQPQQPQYPSSQNQQQ 935 Query: 338 XXXXXXPSYG-DSGYG 382 P YG GYG Sbjct: 936 RQGYKYPGYGQQGGYG 951
>SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2161 Score = 32.3 bits (72), Expect = 0.54 Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 4/89 (4%) Frame = +2 Query: 182 GRPLPPSDETCYPCSAPSTSYDAPHYAAEEPSPYAHHQKPQPAYGFRPQNEXXXXXXXPS 361 G P PP PS Y+AP SP+AHH+ +G P + P+ Sbjct: 1372 GAPQPPP-------RPPSPRYEAPPPTPHHHSPHAHHEPVLRLWGASPPD--------PA 1416 Query: 362 YGDSGY----GSKPKPQPAYGFRPRGRRS 436 + GY GS+ K PA P RRS Sbjct: 1417 RRELGYRAGLGSQEKSLPA--SPPAARRS 1443
>RESIL_DROME (Q9V7U0) Pro-resilin precursor| Length = 620 Score = 32.0 bits (71), Expect = 0.70 Identities = 23/80 (28%), Positives = 27/80 (33%) Frame = +2 Query: 173 VTFGRPLPPSDETCYPCSAPSTSYDAPHYAAEEPSPYAHHQKPQPAYGFRPQNEXXXXXX 352 V GRP PP + PS SY AP + P + P G RP + Sbjct: 14 VVLGRPEPPVNSYL----PPSDSYGAPGQSGPGGRPSDSYGAPGGGNGGRPSDSYGAPGQ 69 Query: 353 XPSYGDSGYGSKPKPQPAYG 412 G G KP YG Sbjct: 70 GQGQGQGQGGYAGKPSDTYG 89 Score = 30.8 bits (68), Expect = 1.6 Identities = 19/61 (31%), Positives = 23/61 (37%) Frame = +2 Query: 230 PSTSYDAPHYAAEEPSPYAHHQKPQPAYGFRPQNEXXXXXXXPSYGDSGYGSKPKPQPAY 409 PS SY AP +QKP +YG SYG G G +P +Y Sbjct: 266 PSDSYGAP----------GQNQKPSDSYGAPGSGNGNGGRPSSSYGAPGSGPGGRPSDSY 315 Query: 410 G 412 G Sbjct: 316 G 316
>IF2_THEFY (Q47RV1) Translation initiation factor IF-2| Length = 955 Score = 31.6 bits (70), Expect = 0.91 Identities = 27/85 (31%), Positives = 32/85 (37%), Gaps = 10/85 (11%) Frame = +2 Query: 197 PSDETCYPCSAPSTSYDAPHYAAEEPSPYAHH-----QKPQPAYGFRPQNEXXXXXXXPS 361 PS + SAPS + P A +P P KP P G RP+ PS Sbjct: 75 PSPQQQTKASAPSAGGETPRPAVPKPGPGLKPGPRPVPKPGPRPGPRPEGGAGKAGQQPS 134 Query: 362 YGDSG-----YGSKPKPQPAYGFRP 421 G G G P+P P G RP Sbjct: 135 -GAQGPARPESGKTPRPVPKPGPRP 158
>IF2_PROAC (Q6A7M5) Translation initiation factor IF-2| Length = 964 Score = 31.2 bits (69), Expect = 1.2 Identities = 21/75 (28%), Positives = 29/75 (38%) Frame = +2 Query: 194 PPSDETCYPCSAPSTSYDAPHYAAEEPSPYAHHQKPQPAYGFRPQNEXXXXXXXPSYGDS 373 P + P P + PH A +P P A + P+P G RP PS Sbjct: 140 PAAKPESKPTPKPGQNVPKPHAPAPKPKPGAPSKSPKP--GARPGPRPGGSAGLPS---- 193 Query: 374 GYGSKPKPQPAYGFR 418 ++P P+P G R Sbjct: 194 --AARPGPRPGAGRR 206
>DPOLM_MOUSE (Q9JIW4) DNA polymerase mu (EC 2.7.7.7) (Pol Mu)| Length = 496 Score = 31.2 bits (69), Expect = 1.2 Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 4/41 (9%) Frame = +2 Query: 182 GRPLPPSD----ETCYPCSAPSTSYDAPHYAAEEPSPYAHH 292 G+P+P E P P S P YA + PSP HH Sbjct: 112 GQPVPEEGRHHLEVAEPRKEPPVSASMPAYACQRPSPLTHH 152
>HFE_PANTR (P60018) Hereditary hemochromatosis protein homolog precursor| (HLA-H) Length = 348 Score = 30.8 bits (68), Expect = 1.6 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Frame = +2 Query: 122 DFDEFDSTPYGGG-YDLFVTFGRPLPPSDETCYPCSAPSTSYDAPHYAAEEPSP 280 +F+ D P G G Y ++T +PP +E Y C D P EPSP Sbjct: 250 EFEPKDVLPNGDGTYQGWITLA--VPPGEEQRYTCQVEHPGLDQPLIVIWEPSP 301
>HFE_HUMAN (Q30201) Hereditary hemochromatosis protein precursor (HLA-H)| Length = 348 Score = 30.8 bits (68), Expect = 1.6 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Frame = +2 Query: 122 DFDEFDSTPYGGG-YDLFVTFGRPLPPSDETCYPCSAPSTSYDAPHYAAEEPSP 280 +F+ D P G G Y ++T +PP +E Y C D P EPSP Sbjct: 250 EFEPKDVLPNGDGTYQGWITLA--VPPGEEQRYTCQVEHPGLDQPLIVIWEPSP 301
>HXB1_MOUSE (P17919) Homeobox protein Hox-B1 (Hox-2.9)| Length = 297 Score = 30.8 bits (68), Expect = 1.6 Identities = 34/98 (34%), Positives = 39/98 (39%), Gaps = 10/98 (10%) Frame = +2 Query: 149 YGGGYD---LFVTFGRPL--PPSD-ETCYPCSAPSTSYDAPHYAAEEPSPY-AHHQKPQP 307 YGGG L G P+ PPS +P APS A + PS Y + Q Sbjct: 45 YGGGLPSSALQQNSGYPVQQPPSSLGVSFPSPAPSGYAPAACNPSYGPSQYYSVGQSEGD 104 Query: 308 AYGFRPQNEXXXXXXXP-SYGDSGYGSKP--KPQPAYG 412 F P + P SYG G GS P PQP YG Sbjct: 105 GSYFHPSSYGAQLGGLPDSYGAGGVGSGPYPPPQPPYG 142
>MYO15_MOUSE (Q9QZZ4) Myosin-15 (Myosin XV) (Unconventional myosin-15)| Length = 3511 Score = 30.4 bits (67), Expect = 2.0 Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 1/58 (1%) Frame = +2 Query: 149 YGGGYDLFVT-FGRPLPPSDETCYPCSAPSTSYDAPHYAAEEPSPYAHHQKPQPAYGF 319 YG GYD F + P S Y S S +Y +Y PYA H P P Y F Sbjct: 302 YGYGYDDFEPPYAPPSGYSSPYSYHDSFESEAYPYSYYL----DPYATHHMPYPPYDF 355
>PO3F2_RAT (P56222) POU domain, class 3, transcription factor 2 (Nervous| system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2) Length = 445 Score = 30.0 bits (66), Expect = 2.7 Identities = 11/24 (45%), Positives = 17/24 (70%), Gaps = 1/24 (4%) Frame = +2 Query: 239 SYDAPHYAAEEPSPYAH-HQKPQP 307 ++D PH+A P P++H HQ+P P Sbjct: 220 AHDEPHHADHHPHPHSHPHQQPPP 243
>PO3F2_MOUSE (P31360) POU domain, class 3, transcription factor 2 (Nervous| system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2) Length = 445 Score = 30.0 bits (66), Expect = 2.7 Identities = 11/24 (45%), Positives = 17/24 (70%), Gaps = 1/24 (4%) Frame = +2 Query: 239 SYDAPHYAAEEPSPYAH-HQKPQP 307 ++D PH+A P P++H HQ+P P Sbjct: 220 AHDEPHHADHHPHPHSHPHQQPPP 243
>BAR1_CHITE (P02849) Balbiani ring protein 1 (Giant secretory protein I-A)| (GSP-IA) (Fragment) Length = 174 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Frame = +2 Query: 293 QKPQPAYGFRPQNEXXXXXXXPSYGDSGYGSKPKPQ-PAYGFRPR 424 +K +P+ G +P+ E P GSKP+P+ P+ G +PR Sbjct: 121 RKSEPSKGSKPRPEKPSKESKPRPEKPSKGSKPRPEKPSKGSKPR 165
>EXTN_DAUCA (P06599) Extensin precursor| Length = 306 Score = 30.0 bits (66), Expect = 2.7 Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 2/79 (2%) Frame = +2 Query: 188 PLPPSDETCYPCSAPSTSYDAP--HYAAEEPSPYAHHQKPQPAYGFRPQNEXXXXXXXPS 361 P PP+ Y P AP HY + P P H P+ Y ++ ++ P Sbjct: 134 PPPPTPVYKYKSPPPPKHSPAPEHHYKYKSPPPPKHFPAPEHHYKYKYKSP------PPP 187 Query: 362 YGDSGYGSKPKPQPAYGFR 418 Y S P P P Y ++ Sbjct: 188 TPVYKYKSPPPPTPVYKYK 206
>PO3F2_HUMAN (P20265) POU domain, class 3, transcription factor 2 (Nervous| system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2) Length = 443 Score = 30.0 bits (66), Expect = 2.7 Identities = 11/24 (45%), Positives = 17/24 (70%), Gaps = 1/24 (4%) Frame = +2 Query: 239 SYDAPHYAAEEPSPYAH-HQKPQP 307 ++D PH+A P P++H HQ+P P Sbjct: 218 AHDEPHHADHHPHPHSHPHQQPPP 241
>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich| glycoprotein) Length = 620 Score = 30.0 bits (66), Expect = 2.7 Identities = 32/115 (27%), Positives = 39/115 (33%), Gaps = 21/115 (18%) Frame = +2 Query: 140 STPYGGGYDLFVTFGRP------LPPSDETCYPCS---APSTSYDAPHYAAEEPS----- 277 +T YGG VT P PPS T P S PS + P +A PS Sbjct: 27 TTQYGGYLPPPVTSQPPPSSIGLSPPSAPTTTPPSRGHVPSPRHAPPRHAYPPPSHGHLP 86 Query: 278 -------PYAHHQKPQPAYGFRPQNEXXXXXXXPSYGDSGYGSKPKPQPAYGFRP 421 P+ H P + P PSYG P P++G RP Sbjct: 87 PSVGGPPPHRGHLPPSRGFNPPPSPVISPSHPPPSYGAPPPSHGPGHLPSHGQRP 141 Score = 29.6 bits (65), Expect = 3.5 Identities = 15/47 (31%), Positives = 20/47 (42%) Frame = +2 Query: 185 RPLPPSDETCYPCSAPSTSYDAPHYAAEEPSPYAHHQKPQPAYGFRP 325 +P PP+ P S P+ S P P P+ + P P YG P Sbjct: 519 QPRPPTPTYGQPPSPPTFSPPPPRQIHSPPPPHWQPRTPTPTYGQPP 565
>STF1_MACEU (Q95L87) Steroidogenic factor 1 (STF-1) (SF-1)| Length = 463 Score = 29.6 bits (65), Expect = 3.5 Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 5/47 (10%) Frame = +2 Query: 194 PPSDETCYPCSAPSTSYDAPHYA-----AEEPSPYAHHQKPQPAYGF 319 PP P P Y P + +E P PYA +P P YG+ Sbjct: 166 PPGVPMAVPTHGPLAGYLYPAFPGRAIKSEYPEPYASPHEPAPPYGY 212
>MINC_PSEAE (Q9HYZ7) Probable septum site-determining protein minC| Length = 263 Score = 29.6 bits (65), Expect = 3.5 Identities = 17/40 (42%), Positives = 20/40 (50%) Frame = +2 Query: 191 LPPSDETCYPCSAPSTSYDAPHYAAEEPSPYAHHQKPQPA 310 LPPS P + AP AEEPSP A +P+PA Sbjct: 107 LPPSGARERPLDIKDS---APRKPAEEPSPSAGEARPEPA 143
>BCAR1_HUMAN (P56945) Breast cancer anti-estrogen resistance protein 1| (CRK-associated substrate) (p130cas) Length = 870 Score = 29.6 bits (65), Expect = 3.5 Identities = 18/73 (24%), Positives = 25/73 (34%) Frame = +2 Query: 218 PCSAPSTSYDAPHYAAEEPSPYAHHQKPQPAYGFRPQNEXXXXXXXPSYGDSGYGSKPKP 397 P S P + P P+P A P ++PQ + PS G P P Sbjct: 74 PGSGPPATPAQPQPGLHAPAPPASQYTPMLPNTYQPQPDSVYLVPTPSKAQQGLYQVPGP 133 Query: 398 QPAYGFRPRGRRS 436 P + P + S Sbjct: 134 SPQFQSPPAKQTS 146
>EXTN2_ARATH (Q9M1G9) Extensin-2 precursor (AtExt2) (Cell wall| hydroxyproline-rich glycoprotein 1) (HRGP1) Length = 743 Score = 29.6 bits (65), Expect = 3.5 Identities = 13/39 (33%), Positives = 17/39 (43%) Frame = +2 Query: 197 PSDETCYPCSAPSTSYDAPHYAAEEPSPYAHHQKPQPAY 313 PS + Y P Y +P PSP H++ P P Y Sbjct: 512 PSPKVYYKSPPPPYVYSSPPPPYYSPSPKVHYKSPPPPY 550 Score = 29.3 bits (64), Expect = 4.5 Identities = 13/39 (33%), Positives = 17/39 (43%) Frame = +2 Query: 197 PSDETCYPCSAPSTSYDAPHYAAEEPSPYAHHQKPQPAY 313 PS + Y P Y +P PSP H++ P P Y Sbjct: 537 PSPKVHYKSPPPPYVYSSPPPPYYSPSPKVHYKSPPPPY 575
>PNS1_NEUCR (Q870V7) Protein PNS1| Length = 554 Score = 29.6 bits (65), Expect = 3.5 Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 9/59 (15%) Frame = +2 Query: 272 PSPYAHHQKPQPAYGFRPQNEXXXXXXXPSYGDSGY---------GSKPKPQPAYGFRP 421 P+ + Q+PQ YG P + YGD GY GSKP P YG P Sbjct: 34 PTDGNYGQQPQYGYGGGPPPQQYGN----GYGDGGYAPPQGPPPNGSKPPPTDGYGGPP 88
>OPSD_OCTDO (P09241) Rhodopsin| Length = 455 Score = 29.6 bits (65), Expect = 3.5 Identities = 15/48 (31%), Positives = 20/48 (41%) Frame = +2 Query: 284 AHHQKPQPAYGFRPQNEXXXXXXXPSYGDSGYGSKPKPQPAYGFRPRG 427 A +Q P P G+ PQ P G G P+ P G+ P+G Sbjct: 385 AAYQPPPPPQGYPPQGYPPQGAYPPPQGYPPQGYPPQGYPPQGYPPQG 432
>PALI_NEUCR (Q7SFN5) pH-response regulator protein palI/rim-9| Length = 705 Score = 29.3 bits (64), Expect = 4.5 Identities = 25/90 (27%), Positives = 33/90 (36%), Gaps = 9/90 (10%) Frame = +2 Query: 182 GRPLPPSDETCYPCSAPSTSYDAPH--------YAAEEPSPYAHHQKPQPAYGFRPQNEX 337 GR PP P PS AP+ Y +PSPYA+ Q+ Sbjct: 382 GRGPPPQGYQGGPDRRPSPG--APYGPGPGVGTYGPSQPSPYANRQQSP----------- 428 Query: 338 XXXXXXPSYGDSGYGSKPKPQPAY-GFRPR 424 P + GYG+ +P P Y + PR Sbjct: 429 -----GPQFAAPGYGNPEQPGPQYSAYNPR 453
>IF2_STRAW (Q82K53) Translation initiation factor IF-2| Length = 1046 Score = 29.3 bits (64), Expect = 4.5 Identities = 30/94 (31%), Positives = 36/94 (38%), Gaps = 12/94 (12%) Frame = +2 Query: 188 PLPPSDETCYPCSAPSTSYDAPHYAAEEPSPYAHHQKPQPAYGFRP-----------QNE 334 P P + E P SAP+ AP AA P P A P+P G RP + E Sbjct: 125 PAPAAPEFTAPPSAPA----APAAAASGPRPGARPGAPKPG-GARPATPGQGQGGQVRGE 179 Query: 335 XXXXXXXPSYGDSGYGSKPKPQ-PAYGFRPRGRR 433 GD ++P Q P G RP G R Sbjct: 180 RTDRGDRGDRGDRQGAARPGGQAPRPGARPAGPR 213
>RPB1_DROME (P04052) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| Length = 1887 Score = 29.3 bits (64), Expect = 4.5 Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 6/76 (7%) Frame = +2 Query: 212 CYPCSAPSTSYDAPHYAAEEPSPYAHHQKPQPAYGFRPQNEXXXXXXXPSYGDSGYGSKP 391 CY ++PS S +P+Y PS + P Y PQ P+Y +G P Sbjct: 1705 CYSPTSPSYSPTSPNYTPVTPS----YSPTSPNYSASPQ----YSPASPAYSQTGVKYSP 1756 Query: 392 ------KPQPAYGFRP 421 P P+Y P Sbjct: 1757 TSPTYSPPSPSYDGSP 1772
>VP40_EBV (P03234) Capsid protein P40 (Virion structural protein BVRF2)| (EC-RF3 and EC-RF3A) [Contains: Capsid protein VP24 (Assemblin) (Protease) (EC 3.4.21.97); Capsid protein VP22A; C-terminal peptide] Length = 605 Score = 28.9 bits (63), Expect = 5.9 Identities = 19/69 (27%), Positives = 23/69 (33%), Gaps = 9/69 (13%) Frame = +2 Query: 197 PSDETCYPCSAP-----STSYDAPHYAAEEPSPYAHHQ----KPQPAYGFRPQNEXXXXX 349 P CY S P SY+ P Y P P HQ +P P P+ Sbjct: 473 PQQGPCYTHSGPYGFQPHQSYEVPRYVPHPPPPPTSHQAAQAQPPPPGTQAPEAHCVAES 532 Query: 350 XXPSYGDSG 376 P G +G Sbjct: 533 TIPEAGAAG 541
>TFE2_HUMAN (P15923) Transcription factor E2-alpha (Immunoglobulin| enhancer-binding factor E12/E47) (Transcription factor 3) (TCF-3) (Immunoglobulin transcription factor 1) (Transcription factor ITF-1) (Kappa-E2-binding factor) Length = 654 Score = 28.9 bits (63), Expect = 5.9 Identities = 23/69 (33%), Positives = 27/69 (39%), Gaps = 2/69 (2%) Frame = +2 Query: 203 DETCYPCS-APSTSYDAPHYAAE-EPSPYAHHQKPQPAYGFRPQNEXXXXXXXPSYGDSG 376 D T YP + PS++Y AP Y A+ P A P GF P G Sbjct: 196 DATAYPSAKTPSSTYPAPFYVADGSLHPSAELWSPPGQAGFGPM--------------LG 241 Query: 377 YGSKPKPQP 403 GS P P P Sbjct: 242 GGSSPLPLP 250
>BAG4_MOUSE (Q8CI61) BAG family molecular chaperone regulator 4| (BCL2-associated athanogene 4) (BAG-4) (Silencer of death domains) Length = 457 Score = 28.9 bits (63), Expect = 5.9 Identities = 25/91 (27%), Positives = 30/91 (32%), Gaps = 12/91 (13%) Frame = +2 Query: 146 PYGGGYDLFVTFGRPLPPSDETC------------YPCSAPSTSYDAPHYAAEEPSPYAH 289 PYG G G P D+ +P +APS Y E SP+ Sbjct: 221 PYGDGNRAVPQSGGTGRPQDDAWASSAYGMGARYPWPSAAPSAPSAGSLYMTESASPWPG 280 Query: 290 HQKPQPAYGFRPQNEXXXXXXXPSYGDSGYG 382 + PQP PQ SY SG G Sbjct: 281 NSSPQPPPSPPPQQPKDPSY---SYNPSGQG 308
>IF2_DESVH (Q72ER1) Translation initiation factor IF-2| Length = 1079 Score = 28.9 bits (63), Expect = 5.9 Identities = 13/44 (29%), Positives = 20/44 (45%) Frame = +2 Query: 302 QPAYGFRPQNEXXXXXXXPSYGDSGYGSKPKPQPAYGFRPRGRR 433 +P G+RP+ + + GY P+P G+RP G R Sbjct: 303 RPEGGYRPEGQREGGYRPEGQREGGYRPGGAPRPEGGYRPGGPR 346
>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated| protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor SF3b 49 kDa subunit) Length = 424 Score = 28.9 bits (63), Expect = 5.9 Identities = 19/76 (25%), Positives = 27/76 (35%), Gaps = 1/76 (1%) Frame = +2 Query: 188 PLPPSDETCYPCSAPSTSYDAPHYAAEEPSPYAHHQKPQPAYG-FRPQNEXXXXXXXPSY 364 P+PP P SA + P + P P+ P P + + P Sbjct: 265 PMPPGAAGHGPPSAGTPGAGHPGHGHSHPHPFPPGGMPHPGMSQMQLAHHGPHGLGHPHA 324 Query: 365 GDSGYGSKPKPQPAYG 412 G G G +P P+P G Sbjct: 325 GPPGSGGQPPPRPPPG 340
>ZIPA_ERWCT (Q6D8S6) Cell division protein zipA homolog| Length = 332 Score = 28.5 bits (62), Expect = 7.7 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +2 Query: 239 SYDAPHYAAEEPSPYAHHQKPQPA 310 +YDAP A ++P ++ H+K QPA Sbjct: 160 AYDAPSSAQQQPVSHSLHEKVQPA 183
>TEGU_EBV (P03186) Large tegument protein| Length = 3149 Score = 28.5 bits (62), Expect = 7.7 Identities = 20/72 (27%), Positives = 25/72 (34%) Frame = +2 Query: 188 PLPPSDETCYPCSAPSTSYDAPHYAAEEPSPYAHHQKPQPAYGFRPQNEXXXXXXXPSYG 367 P + T S P T P AA PSP Q+P P+ P PS Sbjct: 525 PTAAAAPTTTTLSPPPTQQQPPQSAAPAPSPLLPQQQPTPSAAPAPSPLLPQQQPPPSAA 584 Query: 368 DSGYGSKPKPQP 403 + P+ QP Sbjct: 585 RAPSPLPPQQQP 596
>PTN23_RAT (O88902) Tyrosine-protein phosphatase non-receptor type 23 (EC| 3.1.3.48) (His-domain-containing protein tyrosine phosphatase) (HD-PTP) (Protein tyrosine phosphatase TD14) (PTP-TD14) (Fragment) Length = 1499 Score = 28.5 bits (62), Expect = 7.7 Identities = 26/76 (34%), Positives = 27/76 (35%), Gaps = 1/76 (1%) Frame = +2 Query: 182 GRPLPPSDETCYPCSAPSTSYDAPHYAAEE-PSPYAHHQKPQPAYGFRPQNEXXXXXXXP 358 G+P P YP P T PH A PSP H P AYG P P Sbjct: 872 GQPPPTRHTQLYPGPPPDTL--PPHSGALPFPSPGPPHPHPTLAYGPAPSPRPLGPQATP 929 Query: 359 SYGDSGYGSKPKPQPA 406 S G P QPA Sbjct: 930 V---SIRGPPPANQPA 942
>SPT5H_DROME (Q9V460) Transcription elongation factor SPT5 (dSpt5) (DRB| sensitivity-inducing factor large subunit) (DSIF large subunit) Length = 1078 Score = 28.5 bits (62), Expect = 7.7 Identities = 20/71 (28%), Positives = 24/71 (33%), Gaps = 4/71 (5%) Frame = +2 Query: 203 DETCYPCSAPSTSYDAPHYAAEEPSPYAHHQKPQPAY----GFRPQNEXXXXXXXPSYGD 370 D T A + +D Y+ EEPSP + P Y F PQ SY Sbjct: 862 DPTANTTPARNNDFD---YSLEEPSPSPGYNPSTPGYQMTSQFAPQTPGTLYGSDRSYSP 918 Query: 371 SGYGSKPKPQP 403 P P P Sbjct: 919 FNPSPSPAPSP 929
>GAP_CAEEL (P34288) GTPase-activating protein GAP (CeGAP)| Length = 1317 Score = 28.5 bits (62), Expect = 7.7 Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 1/77 (1%) Frame = +2 Query: 164 DLFVTFGRPLPPSDETCYPCS-APSTSYDAPHYAAEEPSPYAHHQKPQPAYGFRPQNEXX 340 D T PL + C+ P++S D YA+ +PSP A + PA RP N Sbjct: 1152 DYSTTSSAPLSTNPPLAVACADQPNSSSD---YASSDPSPCARNPSTSPA--SRPSNLAI 1206 Query: 341 XXXXXPSYGDSGYGSKP 391 + SG +P Sbjct: 1207 SPAQLHATSSSGQSHQP 1223
>EXTN_MAIZE (P14918) Extensin precursor (Proline-rich glycoprotein)| Length = 267 Score = 28.5 bits (62), Expect = 7.7 Identities = 19/72 (26%), Positives = 28/72 (38%) Frame = +2 Query: 188 PLPPSDETCYPCSAPSTSYDAPHYAAEEPSPYAHHQKPQPAYGFRPQNEXXXXXXXPSYG 367 P PP+ + P P T +P +P+P + P+P P + P+Y Sbjct: 41 PKPPASKPPTPKPTPPTYTPSPKPPTPKPTPPTYTPSPKPPATKPPTPK----PTPPTYT 96 Query: 368 DSGYGSKPKPQP 403 S PKP P Sbjct: 97 PSPKPPTPKPTP 108
>NFAC1_MOUSE (O88942) Nuclear factor of activated T-cells, cytoplasmic 1 (NFAT| transcription complex cytosolic component) (NF-ATc1) (NF-ATc) Length = 717 Score = 28.5 bits (62), Expect = 7.7 Identities = 21/71 (29%), Positives = 25/71 (35%), Gaps = 7/71 (9%) Frame = +2 Query: 185 RPLPPSDETCYPCSAPSTSYDAPHYAAEEPSPYAHHQKPQPAYGFRPQNEXXXXXXX--- 355 RP PPS T SY +P + P P AH P + + Sbjct: 28 RPAPPSGGTMKAAEEEHYSYVSPSVTSTLPLPTAHSALPAACHDLQTSTPGISAVPSANH 87 Query: 356 -PSYG---DSG 376 PSYG DSG Sbjct: 88 PPSYGGAVDSG 98 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.311 0.134 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,092,817 Number of Sequences: 219361 Number of extensions: 566008 Number of successful extensions: 1784 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 1554 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1750 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2628831825 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)
