ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast50d04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB110192.1| Oryza sativa (japonica cultivar-group) mRNA for ... 325 7e-86
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 325 7e-86
3dbj|AP005522.2| Oryza sativa (japonica cultivar-group) genomic D... 325 7e-86
4dbj|AK106053.1| Oryza sativa (japonica cultivar-group) cDNA clon... 325 7e-86
5dbj|AK071776.1| Oryza sativa (japonica cultivar-group) cDNA clon... 325 7e-86
6gb|AY596567.1| Saccharum officinarum clone SCJFLR1035G04, comple... 159 9e-36
7gb|AY103548.1| Zea mays PCO091529 mRNA sequence 151 2e-33
8ref|XM_467744.1| Oryza sativa (japonica cultivar-group), mRNA 100 7e-18
9dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 100 7e-18
10dbj|AP005297.3| Oryza sativa (japonica cultivar-group) genomic D... 100 7e-18
11dbj|AP003975.3| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
12ref|XM_479564.1| Oryza sativa (japonica cultivar-group), mRNA 58 3e-05
13dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
14dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
15dbj|AK065098.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
16ref|NM_021224.3| Homo sapiens zinc finger protein 462 (ZNF462), ... 42 1.5
17emb|AL512593.9| Human DNA sequence from clone RP11-508N12 on chr... 42 1.5
18emb|BX648965.1|HSM809116 Homo sapiens mRNA; cDNA DKFZp686L2367 (... 42 1.5
19emb|CR749850.1| Homo sapiens mRNA; cDNA DKFZp686B2325 (from clon... 42 1.5
20dbj|AK127803.1| Homo sapiens cDNA FLJ45904 fis, clone OCBBF3026361 42 1.5
21gb|CP000110.1| Synechococcus sp. CC9605, complete genome 40 5.9
22ref|XM_511771.1| PREDICTED: Pan troglodytes similar to beta-tubu... 40 5.9
23ref|XM_472430.1| Oryza sativa (japonica cultivar-group), predic... 40 5.9
24ref|XM_477167.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.9
25ref|XM_581013.2| PREDICTED: Bos taurus similar to Centaurin-gamm... 40 5.9
26ref|XM_821980.1| Trypanosoma brucei TREU927 hypothetical protein... 40 5.9
27ref|XM_750526.1| Aspergillus fumigatus Af293 hypothetical protei... 40 5.9
28emb|AL117207.1|CEY60A3A Caenorhabditis elegans YAC Y60A3A, compl... 40 5.9
29gb|AC123848.4| Mus musculus BAC clone RP23-459I1 from chromosome... 40 5.9
30ref|XM_538251.2| PREDICTED: Canis familiaris similar to Centauri... 40 5.9
31gb|AC064862.6| Homo sapiens BAC clone RP11-368M16 from 7, comple... 40 5.9
32emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4,... 40 5.9
33emb|AL606453.2|OSJN00010 Oryza sativa genomic DNA, chromosome 4,... 40 5.9
34dbj|D86980.1| Homo sapiens mRNA for KIAA0227 gene, partial cds 40 5.9
35ref|XM_938197.1| PREDICTED: Homo sapiens tetratricopeptide repea... 40 5.9
36ref|XM_027236.6| PREDICTED: Homo sapiens tetratricopeptide repea... 40 5.9
37gb|AC148703.1| Macaca mulatta Major Histocompatibility Complex B... 40 5.9
38gb|AC148694.1| Macaca mulatta Major Histocompatibility Complex B... 40 5.9
39dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
40gb|AC087222.21| Homo sapiens chromosome 17, clone RP11-497H17, c... 40 5.9
41gb|AF340166.1|AF340166 Streptomyces verticillus nonribosomal pep... 40 5.9
42dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 5.9
43dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
44dbj|AP005409.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
45dbj|AK105193.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
46dbj|AK068271.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
47dbj|AK058412.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
48emb|AL357153.4|CNS05TDV Human chromosome 14 DNA sequence BAC C-2... 40 5.9
49gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome 40 5.9
50emb|AL590969.12| Mouse DNA sequence from clone RP23-281C18 on ch... 40 5.9
51gb|AY861359.1| Propionibacterium jensenii transcarboxylase 5S su... 40 5.9
52gb|AY861358.1| Propionibacterium microaerophilum transcarboxylas... 40 5.9
53gb|AY861357.1| Propionibacterium acidipropionici transcarboxylas... 40 5.9 
>dbj|AB110192.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical
           protein, complete cds, clone: 21C4BG001
          Length = 1460

 Score =  325 bits (164), Expect = 7e-86
 Identities = 206/220 (93%)
 Strand = Plus / Plus

                                                                       
Query: 109 cgacgagccggacgacttcgacgagttcgactccacgccctacggcggcggctacgacct 168
           ||||||||| |||||||||||||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 98  cgacgagcccgacgacttcgacgagtacgaccccacgccgtacggcggcggctacgacct 157

                                                                       
Query: 169 cttcgtcaccttcggccgcccgctcccgccctccgacgagacctgctacccctgctccgc 228
           |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 158 cttcatcaccttcggccgcccgctcccgccctccgacgagacctgctacccttgctccgc 217

                                                                       
Query: 229 cccctccacctcctacgacgcgccccactacgccgccgaggagccctccccctacgccca 288
            |||||||||||||||||||| || |||||| ||||||| ||||||||||||||||||||
Sbjct: 218 tccctccacctcctacgacgccccgcactactccgccgacgagccctccccctacgccca 277

                                                   
Query: 289 ccaccagaagccgcagcccgcctacggcttccgcccccag 328
           ||||   |||||||||||||||||||||||||||||||||
Sbjct: 278 ccactccaagccgcagcccgcctacggcttccgcccccag 317



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 296 aagccgcagcccgcctacggcttccgcccccag 328
           ||||| ||||||||||| |||||||||||||||
Sbjct: 411 aagccccagcccgcctatggcttccgcccccag 443



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 390 ccaagccccagcccgcgtacggcttccgcccc 421
           ||||||| |||||||| |||||||||||||||
Sbjct: 283 ccaagccgcagcccgcctacggcttccgcccc 314



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 392 aagccccagcccgcgtacggcttccgcccc 421
           |||||||||||||| || ||||||||||||
Sbjct: 411 aagccccagcccgcctatggcttccgcccc 440



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                        
Query: 60 ccaccaccaacgcagcagccatggcgaccg 89
          ||||||||| ||| ||||||||||||||||
Sbjct: 31 ccaccaccaccgccgcagccatggcgaccg 60
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  325 bits (164), Expect = 7e-86
 Identities = 206/220 (93%)
 Strand = Plus / Minus

                                                                           
Query: 109     cgacgagccggacgacttcgacgagttcgactccacgccctacggcggcggctacgacct 168
               ||||||||| |||||||||||||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 6830365 cgacgagcccgacgacttcgacgagtacgaccccacgccgtacggcggcggctacgacct 6830306

                                                                           
Query: 169     cttcgtcaccttcggccgcccgctcccgccctccgacgagacctgctacccctgctccgc 228
               |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 6830305 cttcatcaccttcggccgcccgctcccgccctccgacgagacctgctacccttgctccgc 6830246

                                                                           
Query: 229     cccctccacctcctacgacgcgccccactacgccgccgaggagccctccccctacgccca 288
                |||||||||||||||||||| || |||||| ||||||| ||||||||||||||||||||
Sbjct: 6830245 tccctccacctcctacgacgccccgcactactccgccgacgagccctccccctacgccca 6830186

                                                       
Query: 289     ccaccagaagccgcagcccgcctacggcttccgcccccag 328
               ||||   |||||||||||||||||||||||||||||||||
Sbjct: 6830185 ccactccaagccgcagcccgcctacggcttccgcccccag 6830146



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                
Query: 296     aagccgcagcccgcctacggcttccgcccccag 328
               ||||| ||||||||||| |||||||||||||||
Sbjct: 6830052 aagccccagcccgcctatggcttccgcccccag 6830020



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                               
Query: 390     ccaagccccagcccgcgtacggcttccgcccc 421
               ||||||| |||||||| |||||||||||||||
Sbjct: 6830180 ccaagccgcagcccgcctacggcttccgcccc 6830149



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 60      ccaccaccaacgcagcagccatggcgaccg 89
               ||||||||| ||| ||||||||||||||||
Sbjct: 6830432 ccaccaccaccgccgcagccatggcgaccg 6830403



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 392     aagccccagcccgcgtacggcttccgcccc 421
               |||||||||||||| || ||||||||||||
Sbjct: 6830052 aagccccagcccgcctatggcttccgcccc 6830023
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>dbj|AP005522.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0479H10
          Length = 139874

 Score =  325 bits (164), Expect = 7e-86
 Identities = 206/220 (93%)
 Strand = Plus / Minus

                                                                         
Query: 109   cgacgagccggacgacttcgacgagttcgactccacgccctacggcggcggctacgacct 168
             ||||||||| |||||||||||||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 19890 cgacgagcccgacgacttcgacgagtacgaccccacgccgtacggcggcggctacgacct 19831

                                                                         
Query: 169   cttcgtcaccttcggccgcccgctcccgccctccgacgagacctgctacccctgctccgc 228
             |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 19830 cttcatcaccttcggccgcccgctcccgccctccgacgagacctgctacccttgctccgc 19771

                                                                         
Query: 229   cccctccacctcctacgacgcgccccactacgccgccgaggagccctccccctacgccca 288
              |||||||||||||||||||| || |||||| ||||||| ||||||||||||||||||||
Sbjct: 19770 tccctccacctcctacgacgccccgcactactccgccgacgagccctccccctacgccca 19711

                                                     
Query: 289   ccaccagaagccgcagcccgcctacggcttccgcccccag 328
             ||||   |||||||||||||||||||||||||||||||||
Sbjct: 19710 ccactccaagccgcagcccgcctacggcttccgcccccag 19671



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 296   aagccgcagcccgcctacggcttccgcccccag 328
             ||||| ||||||||||| |||||||||||||||
Sbjct: 19577 aagccccagcccgcctatggcttccgcccccag 19545



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 390   ccaagccccagcccgcgtacggcttccgcccc 421
             ||||||| |||||||| |||||||||||||||
Sbjct: 19705 ccaagccgcagcccgcctacggcttccgcccc 19674



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 60    ccaccaccaacgcagcagccatggcgaccg 89
             ||||||||| ||| ||||||||||||||||
Sbjct: 19957 ccaccaccaccgccgcagccatggcgaccg 19928



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 392   aagccccagcccgcgtacggcttccgcccc 421
             |||||||||||||| || ||||||||||||
Sbjct: 19577 aagccccagcccgcctatggcttccgcccc 19548
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>dbj|AK106053.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-F05, full
           insert sequence
          Length = 1493

 Score =  325 bits (164), Expect = 7e-86
 Identities = 206/220 (93%)
 Strand = Plus / Plus

                                                                       
Query: 109 cgacgagccggacgacttcgacgagttcgactccacgccctacggcggcggctacgacct 168
           ||||||||| |||||||||||||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 107 cgacgagcccgacgacttcgacgagtacgaccccacgccgtacggcggcggctacgacct 166

                                                                       
Query: 169 cttcgtcaccttcggccgcccgctcccgccctccgacgagacctgctacccctgctccgc 228
           |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 167 cttcatcaccttcggccgcccgctcccgccctccgacgagacctgctacccttgctccgc 226

                                                                       
Query: 229 cccctccacctcctacgacgcgccccactacgccgccgaggagccctccccctacgccca 288
            |||||||||||||||||||| || |||||| ||||||| ||||||||||||||||||||
Sbjct: 227 tccctccacctcctacgacgccccgcactactccgccgacgagccctccccctacgccca 286

                                                   
Query: 289 ccaccagaagccgcagcccgcctacggcttccgcccccag 328
           ||||   |||||||||||||||||||||||||||||||||
Sbjct: 287 ccactccaagccgcagcccgcctacggcttccgcccccag 326



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 296 aagccgcagcccgcctacggcttccgcccccag 328
           ||||| ||||||||||| |||||||||||||||
Sbjct: 420 aagccccagcccgcctatggcttccgcccccag 452



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 390 ccaagccccagcccgcgtacggcttccgcccc 421
           ||||||| |||||||| |||||||||||||||
Sbjct: 292 ccaagccgcagcccgcctacggcttccgcccc 323



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 392 aagccccagcccgcgtacggcttccgcccc 421
           |||||||||||||| || ||||||||||||
Sbjct: 420 aagccccagcccgcctatggcttccgcccc 449



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                        
Query: 60 ccaccaccaacgcagcagccatggcgaccg 89
          ||||||||| ||| ||||||||||||||||
Sbjct: 40 ccaccaccaccgccgcagccatggcgaccg 69
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>dbj|AK071776.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110G05, full
           insert sequence
          Length = 1643

 Score =  325 bits (164), Expect = 7e-86
 Identities = 206/220 (93%)
 Strand = Plus / Plus

                                                                       
Query: 109 cgacgagccggacgacttcgacgagttcgactccacgccctacggcggcggctacgacct 168
           ||||||||| |||||||||||||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 258 cgacgagcccgacgacttcgacgagtacgaccccacgccgtacggcggcggctacgacct 317

                                                                       
Query: 169 cttcgtcaccttcggccgcccgctcccgccctccgacgagacctgctacccctgctccgc 228
           |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 318 cttcatcaccttcggccgcccgctcccgccctccgacgagacctgctacccttgctccgc 377

                                                                       
Query: 229 cccctccacctcctacgacgcgccccactacgccgccgaggagccctccccctacgccca 288
            |||||||||||||||||||| || |||||| ||||||| ||||||||||||||||||||
Sbjct: 378 tccctccacctcctacgacgccccgcactactccgccgacgagccctccccctacgccca 437

                                                   
Query: 289 ccaccagaagccgcagcccgcctacggcttccgcccccag 328
           ||||   |||||||||||||||||||||||||||||||||
Sbjct: 438 ccactccaagccgcagcccgcctacggcttccgcccccag 477



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 296 aagccgcagcccgcctacggcttccgcccccag 328
           ||||| ||||||||||| |||||||||||||||
Sbjct: 571 aagccccagcccgcctatggcttccgcccccag 603



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 390 ccaagccccagcccgcgtacggcttccgcccc 421
           ||||||| |||||||| |||||||||||||||
Sbjct: 443 ccaagccgcagcccgcctacggcttccgcccc 474



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 392 aagccccagcccgcgtacggcttccgcccc 421
           |||||||||||||| || ||||||||||||
Sbjct: 571 aagccccagcccgcctatggcttccgcccc 600



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 60  ccaccaccaacgcagcagccatggcgaccg 89
           ||||||||| ||| ||||||||||||||||
Sbjct: 191 ccaccaccaccgccgcagccatggcgaccg 220
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>gb|AY596567.1| Saccharum officinarum clone SCJFLR1035G04, complete sequence
          Length = 1677

 Score =  159 bits (80), Expect = 9e-36
 Identities = 179/212 (84%)
 Strand = Plus / Minus

                                                                        
Query: 117  cggacgacttcgacgagttcgactccacgccctacggcggcggctacgacctcttcgtca 176
            ||||||||||||| ||||||||| ||||||| |||||||| || |||||||||  |||||
Sbjct: 1428 cggacgacttcgatgagttcgaccccacgccgtacggcggtgggtacgacctcgccgtca 1369

                                                                        
Query: 177  ccttcggccgcccgctcccgccctccgacgagacctgctacccctgctccgccccctcca 236
            |||||||||||||||| ||  | || || |||||||||||||| ||||| || |||||||
Sbjct: 1368 ccttcggccgcccgctgccttcgtcggaggagacctgctacccgtgctcggcgccctcca 1309

                                                                        
Query: 237  cctcctacgacgcgccccactacgccgccgaggagccctccccctacgcccaccaccaga 296
            |||||||||||||||| |||||| |||||   ||||| ||||| ||||  ||||||   |
Sbjct: 1308 cctcctacgacgcgccgcactactccgcctccgagccgtccccgtacggtcaccacgcca 1249

                                            
Query: 297  agccgcagcccgcctacggcttccgcccccag 328
            ||||  |||||  |||||| ||||||||||||
Sbjct: 1248 agcccaagcccaactacgggttccgcccccag 1217
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>gb|AY103548.1| Zea mays PCO091529 mRNA sequence
          Length = 1541

 Score =  151 bits (76), Expect = 2e-33
 Identities = 145/168 (86%)
 Strand = Plus / Plus

                                                                        
Query: 117  cggacgacttcgacgagttcgactccacgccctacggcggcggctacgacctcttcgtca 176
            ||||||||||||| ||||||||| ||||||| |||||||| || |||||||||  |||||
Sbjct: 1008 cggacgacttcgatgagttcgaccccacgccgtacggcggtgggtacgacctcgccgtca 1067

                                                                        
Query: 177  ccttcggccgcccgctcccgccctccgacgagacctgctacccctgctccgccccctcca 236
            ||||||| |||||||| || || ||||| || ||||||||||| ||||| || ||||| |
Sbjct: 1068 ccttcggtcgcccgctgccaccgtccgaggaaacctgctacccgtgctcggcgccctcga 1127

                                                            
Query: 237  cctcctacgacgcgccccactacgccgccgaggagccctccccctacg 284
            ||||||||||||| || ||||||||||||   ||||| ||||||||||
Sbjct: 1128 cctcctacgacgcaccgcactacgccgcctccgagccgtccccctacg 1175
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>ref|XM_467744.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 546

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 104/122 (85%)
 Strand = Plus / Plus

                                                                       
Query: 121 cgacttcgacgagttcgactccacgccctacggcggcggctacgacctcttcgtcacctt 180
           |||||||||||||| |||| |||| || |||||||||||||||||| ||  | |||||||
Sbjct: 48  cgacttcgacgagtacgaccccaccccgtacggcggcggctacgacatcgccctcacctt 107

                                                                       
Query: 181 cggccgcccgctcccgccctccgacgagacctgctacccctgctccgccccctccacctc 240
           ||||||| | |||||||||||||||||||  ||| |||||  |||| || ||||| ||||
Sbjct: 108 cggccgcgccctcccgccctccgacgagatatgccaccccatctccaccgcctcctcctc 167

             
Query: 241 ct 242
           ||
Sbjct: 168 ct 169
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 104/122 (85%)
 Strand = Plus / Plus

                                                                            
Query: 121      cgacttcgacgagttcgactccacgccctacggcggcggctacgacctcttcgtcacctt 180
                |||||||||||||| |||| |||| || |||||||||||||||||| ||  | |||||||
Sbjct: 31203405 cgacttcgacgagtacgaccccaccccgtacggcggcggctacgacatcgccctcacctt 31203464

                                                                            
Query: 181      cggccgcccgctcccgccctccgacgagacctgctacccctgctccgccccctccacctc 240
                ||||||| | |||||||||||||||||||  ||| |||||  |||| || ||||| ||||
Sbjct: 31203465 cggccgcgccctcccgccctccgacgagatatgccaccccatctccaccgcctcctcctc 31203524

                  
Query: 241      ct 242
                ||
Sbjct: 31203525 ct 31203526



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                            
Query: 182      ggccgcccgctcccgccctccgacgagacctgctacccctgctccgccccctccacctcc 241
                |||||||||||||  |||||||||||| || ||||||| |||||||| ||||||||||||
Sbjct: 33931973 ggccgcccgctccgaccctccgacgagtccggctacccttgctccgctccctccacctcc 33931914

                                          
Query: 242      tacgacgcgccccactacgccgccga 267
                ||||| || || |||||| |||||||
Sbjct: 33931913 tacgatgccccacactactccgccga 33931888
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>dbj|AP005297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1734_E02
          Length = 168566

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 104/122 (85%)
 Strand = Plus / Plus

                                                                         
Query: 121   cgacttcgacgagttcgactccacgccctacggcggcggctacgacctcttcgtcacctt 180
             |||||||||||||| |||| |||| || |||||||||||||||||| ||  | |||||||
Sbjct: 83248 cgacttcgacgagtacgaccccaccccgtacggcggcggctacgacatcgccctcacctt 83307

                                                                         
Query: 181   cggccgcccgctcccgccctccgacgagacctgctacccctgctccgccccctccacctc 240
             ||||||| | |||||||||||||||||||  ||| |||||  |||| || ||||| ||||
Sbjct: 83308 cggccgcgccctcccgccctccgacgagatatgccaccccatctccaccgcctcctcctc 83367

               
Query: 241   ct 242
             ||
Sbjct: 83368 ct 83369
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>dbj|AP003975.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1004_E04
          Length = 133621

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                         
Query: 182   ggccgcccgctcccgccctccgacgagacctgctacccctgctccgccccctccacctcc 241
             |||||||||||||  |||||||||||| || ||||||| |||||||| ||||||||||||
Sbjct: 90936 ggccgcccgctccgaccctccgacgagtccggctacccttgctccgctccctccacctcc 90877

                                       
Query: 242   tacgacgcgccccactacgccgccga 267
             ||||| || || |||||| |||||||
Sbjct: 90876 tacgatgccccacactactccgccga 90851
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>ref|XM_479564.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1593

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                    
Query: 146 ccctacggcggcggctacgacctcttcgtcaccttcggccgcccgctcccgccctcc 202
           ||||||||||||||||||||| |||||| ||||| ||||  |||| | |||||||||
Sbjct: 103 ccctacggcggcggctacgacatcttcgccacctacggctccccgattccgccctcc 159
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                         
Query: 146      ccctacggcggcggctacgacctcttcgtcaccttcggccgcccgctcccgccctcc 202
                ||||||||||||||||||||| |||||| ||||| ||||  |||| | |||||||||
Sbjct: 28907149 ccctacggcggcggctacgacatcttcgccacctacggctccccgattccgccctcc 28907093



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 150     acggcggcggctacgacctc 169
               ||||||||||||||||||||
Sbjct: 7241634 acggcggcggctacgacctc 7241615



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 306     ccgcctacggcttccgcccc 325
               ||||||||||||||||||||
Sbjct: 2977677 ccgcctacggcttccgcccc 2977696
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>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0060O17
          Length = 180015

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                      
Query: 146   ccctacggcggcggctacgacctcttcgtcaccttcggccgcccgctcccgccctcc 202
             ||||||||||||||||||||| |||||| ||||| ||||  |||| | |||||||||
Sbjct: 24686 ccctacggcggcggctacgacatcttcgccacctacggctccccgattccgccctcc 24630
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>dbj|AK065098.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001M18, full
           insert sequence
          Length = 1594

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                    
Query: 146 ccctacggcggcggctacgacctcttcgtcaccttcggccgcccgctcccgccctcc 202
           ||||||||||||||||||||| |||||| ||||| ||||  |||| | |||||||||
Sbjct: 103 ccctacggcggcggctacgacatcttcgccacctacggctccccgattccgccctcc 159
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>ref|NM_021224.3| Homo sapiens zinc finger protein 462 (ZNF462), mRNA
          Length = 8310

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 60   ccaccaccaacgcagcagcca 80
            |||||||||||||||||||||
Sbjct: 2033 ccaccaccaacgcagcagcca 2053
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>emb|AL512593.9| Human DNA sequence from clone RP11-508N12 on chromosome 9 Contains two
             novel genes, the gene for a novel zinc finger protein
             (FLJ14960, KIAA1803), a ribosomal protein L7a (RPL7A)
             pseudogene and the 3' end of a novel gene, complete
             sequence
          Length = 148816

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 60    ccaccaccaacgcagcagcca 80
             |||||||||||||||||||||
Sbjct: 47530 ccaccaccaacgcagcagcca 47550
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>emb|BX648965.1|HSM809116 Homo sapiens mRNA; cDNA DKFZp686L2367 (from clone DKFZp686L2367)
          Length = 8310

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 60   ccaccaccaacgcagcagcca 80
            |||||||||||||||||||||
Sbjct: 2033 ccaccaccaacgcagcagcca 2053
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>emb|CR749850.1| Homo sapiens mRNA; cDNA DKFZp686B2325 (from clone DKFZp686B2325)
          Length = 7801

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 60   ccaccaccaacgcagcagcca 80
            |||||||||||||||||||||
Sbjct: 1435 ccaccaccaacgcagcagcca 1455
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>dbj|AK127803.1| Homo sapiens cDNA FLJ45904 fis, clone OCBBF3026361
          Length = 3475

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 60   ccaccaccaacgcagcagcca 80
            |||||||||||||||||||||
Sbjct: 2029 ccaccaccaacgcagcagcca 2049
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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 64      caccaacgcagcagccatggcgac 87
               ||||||||| ||||||||||||||
Sbjct: 1719871 caccaacgctgcagccatggcgac 1719848
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>ref|XM_511771.1| PREDICTED: Pan troglodytes similar to beta-tubulin cofactor D
             (LOC455000), mRNA
          Length = 21183

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 219   cctgctccgccccctccacc 238
             ||||||||||||||||||||
Sbjct: 15824 cctgctccgccccctccacc 15843
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>ref|XM_472430.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 663

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 154 cggcggctacgacctcttcgtcac 177
           |||||||||| |||||||||||||
Sbjct: 498 cggcggctaccacctcttcgtcac 521
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>ref|XM_477167.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1708

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 150 acggcggcggctacgacctc 169
           ||||||||||||||||||||
Sbjct: 60  acggcggcggctacgacctc 79
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>ref|XM_581013.2| PREDICTED: Bos taurus similar to Centaurin-gamma 1 (LOC504833), mRNA
          Length = 3246

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 384  ccaagcccaagccccagccc 403
            ||||||||||||||||||||
Sbjct: 1993 ccaagcccaagccccagccc 2012
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>ref|XM_821980.1| Trypanosoma brucei TREU927 hypothetical protein (Tb09.160.5240)
           partial mRNA
          Length = 1416

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 416 cgccccagggggaggaggag 435
           ||||||||||||||||||||
Sbjct: 402 cgccccagggggaggaggag 383
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>ref|XM_750526.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g12880)
           partial mRNA
          Length = 2412

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 211 ctgctacccctgctccgccccctccacctcctacga 246
           ||||| |||||||||| || ||||||||||| ||||
Sbjct: 516 ctgctccccctgctcctccacctccacctccgacga 481
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>emb|AL117207.1|CEY60A3A Caenorhabditis elegans YAC Y60A3A, complete sequence
          Length = 122592

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 384   ccaagcccaagccccagccc 403
             ||||||||||||||||||||
Sbjct: 98493 ccaagcccaagccccagccc 98474
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>gb|AC123848.4| Mus musculus BAC clone RP23-459I1 from chromosome 5, complete sequence
          Length = 184292

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 271    gccctccccctacgcccaccacca 294
              ||||||||||||| ||||||||||
Sbjct: 118407 gccctccccctacccccaccacca 118384
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>ref|XM_538251.2| PREDICTED: Canis familiaris similar to Centaurin gamma 1 (LOC481130),
            mRNA
          Length = 2235

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 384  ccaagcccaagccccagccc 403
            ||||||||||||||||||||
Sbjct: 1270 ccaagcccaagccccagccc 1289
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>gb|AC064862.6| Homo sapiens BAC clone RP11-368M16 from 7, complete sequence
          Length = 175895

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 384   ccaagcccaagccccagccc 403
             ||||||||||||||||||||
Sbjct: 52572 ccaagcccaagccccagccc 52553
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>emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G16,
             complete sequence
          Length = 114051

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 154   cggcggctacgacctcttcgtcac 177
             |||||||||| |||||||||||||
Sbjct: 23147 cggcggctaccacctcttcgtcac 23124
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>emb|AL606453.2|OSJN00010 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991214_12,
             complete sequence
          Length = 116952

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 154   cggcggctacgacctcttcgtcac 177
             |||||||||| |||||||||||||
Sbjct: 99441 cggcggctaccacctcttcgtcac 99418
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>dbj|D86980.1| Homo sapiens mRNA for KIAA0227 gene, partial cds
          Length = 5217

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 183 gccgcccgctcccgccctcc 202
           ||||||||||||||||||||
Sbjct: 99  gccgcccgctcccgccctcc 80
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>ref|XM_938197.1| PREDICTED: Homo sapiens tetratricopeptide repeat domain 9 (TTC9),
           mRNA
          Length = 5510

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 183 gccgcccgctcccgccctcc 202
           ||||||||||||||||||||
Sbjct: 392 gccgcccgctcccgccctcc 373
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>ref|XM_027236.6| PREDICTED: Homo sapiens tetratricopeptide repeat domain 9 (TTC9),
           mRNA
          Length = 5510

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 183 gccgcccgctcccgccctcc 202
           ||||||||||||||||||||
Sbjct: 392 gccgcccgctcccgccctcc 373
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>gb|AC148703.1| Macaca mulatta Major Histocompatibility Complex BAC MMU326I17, complete
             sequence
          Length = 175689

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 273   cctccccctacgcccaccac 292
             ||||||||||||||||||||
Sbjct: 37832 cctccccctacgcccaccac 37851
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>gb|AC148694.1| Macaca mulatta Major Histocompatibility Complex BAC MMU242A19, complete
              sequence
          Length = 208276

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 273    cctccccctacgcccaccac 292
              ||||||||||||||||||||
Sbjct: 175227 cctccccctacgcccaccac 175246
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 154      cggcggctacgacctcttcgtcac 177
                |||||||||| |||||||||||||
Sbjct: 20588813 cggcggctaccacctcttcgtcac 20588790
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>gb|AC087222.21| Homo sapiens chromosome 17, clone RP11-497H17, complete sequence
          Length = 70000

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 219   cctgctccgccccctccacc 238
             ||||||||||||||||||||
Sbjct: 52453 cctgctccgccccctccacc 52472
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>gb|AF340166.1|AF340166 Streptomyces verticillus nonribosomal peptide synthetase 3-2 and
           amino acid hydroxylase genes, complete cds; nonribosomal
           peptide synthetase 1 gene, partial cds; and unknown gene
          Length = 12277

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 187 cccgctcccgccctccgacg 206
           ||||||||||||||||||||
Sbjct: 317 cccgctcccgccctccgacg 336
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 190   gctcccgccctccgacgaga 209
             ||||||||||||||||||||
Sbjct: 37728 gctcccgccctccgacgaga 37709
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>dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0016A21
          Length = 144076

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 150   acggcggcggctacgacctc 169
             ||||||||||||||||||||
Sbjct: 82118 acggcggcggctacgacctc 82099
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>dbj|AP005409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0024L18
          Length = 150128

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 306   ccgcctacggcttccgcccc 325
             ||||||||||||||||||||
Sbjct: 23732 ccgcctacggcttccgcccc 23751
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>dbj|AK105193.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-D11, full
           insert sequence
          Length = 1364

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 306 ccgcctacggcttccgcccc 325
           ||||||||||||||||||||
Sbjct: 299 ccgcctacggcttccgcccc 318
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>dbj|AK068271.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013139L19, full
           insert sequence
          Length = 1055

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 154 cggcggctacgacctcttcgtcac 177
           |||||||||| |||||||||||||
Sbjct: 626 cggcggctaccacctcttcgtcac 649
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>dbj|AK058412.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-C11, full
           insert sequence
          Length = 1707

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 150 acggcggcggctacgacctc 169
           ||||||||||||||||||||
Sbjct: 60  acggcggcggctacgacctc 79
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>emb|AL357153.4|CNS05TDV Human chromosome 14 DNA sequence BAC C-2540L5 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 209483

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 183    gccgcccgctcccgccctcc 202
              ||||||||||||||||||||
Sbjct: 183327 gccgcccgctcccgccctcc 183308
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>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome
          Length = 2256640

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 116    ccggacgacttcgacgagttcgac 139
              |||||||||||||||| |||||||
Sbjct: 252861 ccggacgacttcgacgtgttcgac 252884
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>emb|AL590969.12| Mouse DNA sequence from clone RP23-281C18 on chromosome 11, complete
             sequence
          Length = 250353

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 222   gctccgccccctccacctcc 241
             ||||||||||||||||||||
Sbjct: 41594 gctccgccccctccacctcc 41613
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>gb|AY861359.1| Propionibacterium jensenii transcarboxylase 5S subunit gene,
           partial cds
          Length = 242

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 295 gaagccgcagcccgcctacg 314
           ||||||||||||||||||||
Sbjct: 161 gaagccgcagcccgcctacg 180
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>gb|AY861358.1| Propionibacterium microaerophilum transcarboxylase 5S subunit gene,
           partial cds
          Length = 242

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 295 gaagccgcagcccgcctacg 314
           ||||||||||||||||||||
Sbjct: 161 gaagccgcagcccgcctacg 180
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>gb|AY861357.1| Propionibacterium acidipropionici transcarboxylase 5S subunit gene,
           partial cds
          Length = 242

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 295 gaagccgcagcccgcctacg 314
           ||||||||||||||||||||
Sbjct: 161 gaagccgcagcccgcctacg 180


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,877,571
Number of Sequences: 3902068
Number of extensions: 2877571
Number of successful extensions: 66470
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65920
Number of HSP's gapped (non-prelim): 545
length of query: 442
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 420
effective length of database: 17,147,199,772
effective search space: 7201823904240
effective search space used: 7201823904240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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