ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast50d01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_482924.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1071 Score = 210 bits (106), Expect = 2e-51 Identities = 156/173 (90%) Strand = Plus / Plus Query: 143 ggacgtcgacttcttcttcttccctttcctggtgcgctacaagagcggccgcgtcgagcg 202 |||||||||||||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 75 ggacgtcgacttcttcttcttccccttcctggtcctctacaagagcggccgcgtcgtgcg 134 Query: 203 gttcgtgggcacggacaccgtgccggcctccgtggaccccgccaccggcgtggcctccaa 262 |||| | |||||||||||||||||||| || ||||||| |||||||||||||||||||| Sbjct: 135 gttcattggcacggacaccgtgccggcgtcgatggacccggccaccggcgtggcctccaa 194 Query: 263 ggacgtggtcatcgacgccgccgcggngctggccgtccgcatctacctgccga 315 |||||||||||||||||||| ||| | || ||||||||| ||||| |||||| Sbjct: 195 ggacgtggtcatcgacgccgacgccggcctcgccgtccgcctctacttgccga 247
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 210 bits (106), Expect = 2e-51 Identities = 156/173 (90%) Strand = Plus / Minus Query: 143 ggacgtcgacttcttcttcttccctttcctggtgcgctacaagagcggccgcgtcgagcg 202 |||||||||||||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 23396804 ggacgtcgacttcttcttcttccccttcctggtcctctacaagagcggccgcgtcgtgcg 23396745 Query: 203 gttcgtgggcacggacaccgtgccggcctccgtggaccccgccaccggcgtggcctccaa 262 |||| | |||||||||||||||||||| || ||||||| |||||||||||||||||||| Sbjct: 23396744 gttcattggcacggacaccgtgccggcgtcgatggacccggccaccggcgtggcctccaa 23396685 Query: 263 ggacgtggtcatcgacgccgccgcggngctggccgtccgcatctacctgccga 315 |||||||||||||||||||| ||| | || ||||||||| ||||| |||||| Sbjct: 23396684 ggacgtggtcatcgacgccgacgccggcctcgccgtccgcctctacttgccga 23396632 Score = 60.0 bits (30), Expect = 5e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 236 ggaccccgccaccggcgtggcctccaaggacgtggtcatcgacgcc 281 |||| ||| ||||||||| |||||||||||||||||||||||||| Sbjct: 23402272 ggacgccgtcaccggcgtcacctccaaggacgtggtcatcgacgcc 23402227 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 14 tttgatcatggccgggagcatcccgtccgcgctgttgctcctgcttaacatggcggg 70 |||| ||||||| | ||||||| |||| |||||| |||||||||| ||||||||||| Sbjct: 23396927 tttgctcatggcggcgagcatctcgtctgcgctgctgctcctgctcaacatggcggg 23396871 Score = 44.1 bits (22), Expect = 0.31 Identities = 31/34 (91%) Strand = Plus / Minus Query: 114 gcctccgccggcgccgccgatgacgacggggacg 147 |||||||||| |||||||| ||||||||||||| Sbjct: 10207797 gcctccgccgccgccgccggcgacgacggggacg 10207764 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 cgctacaagagcggccgcgtc 197 ||||||||||||||||||||| Sbjct: 23402331 cgctacaagagcggccgcgtc 23402311 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 gaggagcgggcgcggcggca 351 |||||||||||||||||||| Sbjct: 25838442 gaggagcgggcgcggcggca 25838423 Score = 40.1 bits (20), Expect = 4.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 229 cctccgtggaccccgccaccggcgtggcctcc 260 ||||||| ||| ||||||||||||| |||||| Sbjct: 23410035 cctccgtcgacgccgccaccggcgtcgcctcc 23410066 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 cggcctccgccggcgccgcc 131 |||||||||||||||||||| Sbjct: 8063685 cggcctccgccggcgccgcc 8063704
>dbj|AP004399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0451G12 Length = 142182 Score = 210 bits (106), Expect = 2e-51 Identities = 156/173 (90%) Strand = Plus / Minus Query: 143 ggacgtcgacttcttcttcttccctttcctggtgcgctacaagagcggccgcgtcgagcg 202 |||||||||||||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 78641 ggacgtcgacttcttcttcttccccttcctggtcctctacaagagcggccgcgtcgtgcg 78582 Query: 203 gttcgtgggcacggacaccgtgccggcctccgtggaccccgccaccggcgtggcctccaa 262 |||| | |||||||||||||||||||| || ||||||| |||||||||||||||||||| Sbjct: 78581 gttcattggcacggacaccgtgccggcgtcgatggacccggccaccggcgtggcctccaa 78522 Query: 263 ggacgtggtcatcgacgccgccgcggngctggccgtccgcatctacctgccga 315 |||||||||||||||||||| ||| | || ||||||||| ||||| |||||| Sbjct: 78521 ggacgtggtcatcgacgccgacgccggcctcgccgtccgcctctacttgccga 78469 Score = 60.0 bits (30), Expect = 5e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 236 ggaccccgccaccggcgtggcctccaaggacgtggtcatcgacgcc 281 |||| ||| ||||||||| |||||||||||||||||||||||||| Sbjct: 84109 ggacgccgtcaccggcgtcacctccaaggacgtggtcatcgacgcc 84064 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 14 tttgatcatggccgggagcatcccgtccgcgctgttgctcctgcttaacatggcggg 70 |||| ||||||| | ||||||| |||| |||||| |||||||||| ||||||||||| Sbjct: 78764 tttgctcatggcggcgagcatctcgtctgcgctgctgctcctgctcaacatggcggg 78708 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 cgctacaagagcggccgcgtc 197 ||||||||||||||||||||| Sbjct: 84168 cgctacaagagcggccgcgtc 84148 Score = 40.1 bits (20), Expect = 4.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 229 cctccgtggaccccgccaccggcgtggcctcc 260 ||||||| ||| ||||||||||||| |||||| Sbjct: 91872 cctccgtcgacgccgccaccggcgtcgcctcc 91903
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 243 gccaccggcgtggcctccaaggacgtggtcatcgacgccg 282 ||||||||||| |||||||||||||| ||||||||||||| Sbjct: 17362874 gccaccggcgtcgcctccaaggacgtcgtcatcgacgccg 17362913 Score = 48.1 bits (24), Expect = 0.020 Identities = 36/40 (90%) Strand = Plus / Plus Query: 243 gccaccggcgtggcctccaaggacgtggtcatcgacgccg 282 ||||||||||| | |||||||||||| ||| ||||||||| Sbjct: 17370049 gccaccggcgtcgtctccaaggacgtcgtcctcgacgccg 17370088 Score = 48.1 bits (24), Expect = 0.020 Identities = 36/40 (90%) Strand = Plus / Plus Query: 243 gccaccggcgtggcctccaaggacgtggtcatcgacgccg 282 ||||||||||| | |||||||||||| ||| ||||||||| Sbjct: 17366673 gccaccggcgtcgtctccaaggacgtcgtcctcgacgccg 17366712 Score = 48.1 bits (24), Expect = 0.020 Identities = 36/40 (90%) Strand = Plus / Plus Query: 243 gccaccggcgtggcctccaaggacgtggtcatcgacgccg 282 ||||||||||| ||||||||||||| ||| ||||||||| Sbjct: 17359804 gccaccggcgtcacctccaaggacgtcgtcctcgacgccg 17359843 Score = 46.1 bits (23), Expect = 0.080 Identities = 23/23 (100%) Strand = Plus / Plus Query: 180 tacaagagcggccgcgtcgagcg 202 ||||||||||||||||||||||| Sbjct: 17417920 tacaagagcggccgcgtcgagcg 17417942 Score = 46.1 bits (23), Expect = 0.080 Identities = 38/43 (88%) Strand = Plus / Plus Query: 242 cgccaccggcgtggcctccaaggacgtggtcatcgacgccgcc 284 ||||||||| || ||||||||||||| |||||||||| |||| Sbjct: 17404546 cgccaccggggtcacctccaaggacgtcgtcatcgacgacgcc 17404588 Score = 44.1 bits (22), Expect = 0.31 Identities = 37/42 (88%) Strand = Plus / Minus Query: 237 gaccccgccaccggcgtggcctccaaggacgtggtcatcgac 278 |||||||||| |||||| | |||||||||||| ||| ||||| Sbjct: 17407161 gaccccgccaacggcgtcgtctccaaggacgtcgtcctcgac 17407120 Score = 44.1 bits (22), Expect = 0.31 Identities = 34/38 (89%) Strand = Plus / Plus Query: 243 gccaccggcgtggcctccaaggacgtggtcatcgacgc 280 ||||||||||| | ||||||||||||||| ||||||| Sbjct: 17372969 gccaccggcgtcacgtccaaggacgtggtcgtcgacgc 17373006 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 243 gccaccggcgtggcctccaaggacgtggtcatcgac 278 |||||||| ||| | ||||||||||| ||||||||| Sbjct: 17412928 gccaccggggtgacgtccaaggacgtcgtcatcgac 17412963 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 245 caccggcgtggcctccaaggacgtggtcatcgacgc 280 ||||||||| ||||||| ||||| ||||||||||| Sbjct: 17117977 caccggcgtcacctccaaagacgtcgtcatcgacgc 17117942
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 63.9 bits (32), Expect = 3e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 143 ggacgtcgacttcttcttcttccctttcctggtgcgctacaagagcgg 190 |||||||||||||||||||||||| |||||||| | ||||||| |||| Sbjct: 22040093 ggacgtcgacttcttcttcttccccttcctggtcctctacaagtgcgg 22040140 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 110 gccggcctccgccggcgccgcc 131 |||||||||||||||||||||| Sbjct: 5217967 gccggcctccgccggcgccgcc 5217946
>dbj|AP005699.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0046L23 Length = 100041 Score = 63.9 bits (32), Expect = 3e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 143 ggacgtcgacttcttcttcttccctttcctggtgcgctacaagagcgg 190 |||||||||||||||||||||||| |||||||| | ||||||| |||| Sbjct: 88715 ggacgtcgacttcttcttcttccccttcctggtcctctacaagtgcgg 88762
>dbj|AP005116.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0703B01 Length = 137445 Score = 63.9 bits (32), Expect = 3e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 143 ggacgtcgacttcttcttcttccctttcctggtgcgctacaagagcgg 190 |||||||||||||||||||||||| |||||||| | ||||||| |||| Sbjct: 13992 ggacgtcgacttcttcttcttccccttcctggtcctctacaagtgcgg 14039
>dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0054F02 Length = 180651 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 243 gccaccggcgtggcctccaaggacgtggtcatcgacgccg 282 ||||||||||| |||||||||||||| ||||||||||||| Sbjct: 86787 gccaccggcgtcgcctccaaggacgtcgtcatcgacgccg 86826 Score = 48.1 bits (24), Expect = 0.020 Identities = 36/40 (90%) Strand = Plus / Plus Query: 243 gccaccggcgtggcctccaaggacgtggtcatcgacgccg 282 ||||||||||| | |||||||||||| ||| ||||||||| Sbjct: 93962 gccaccggcgtcgtctccaaggacgtcgtcctcgacgccg 94001 Score = 48.1 bits (24), Expect = 0.020 Identities = 36/40 (90%) Strand = Plus / Plus Query: 243 gccaccggcgtggcctccaaggacgtggtcatcgacgccg 282 ||||||||||| | |||||||||||| ||| ||||||||| Sbjct: 90586 gccaccggcgtcgtctccaaggacgtcgtcctcgacgccg 90625 Score = 48.1 bits (24), Expect = 0.020 Identities = 36/40 (90%) Strand = Plus / Plus Query: 243 gccaccggcgtggcctccaaggacgtggtcatcgacgccg 282 ||||||||||| ||||||||||||| ||| ||||||||| Sbjct: 83717 gccaccggcgtcacctccaaggacgtcgtcctcgacgccg 83756 Score = 46.1 bits (23), Expect = 0.080 Identities = 23/23 (100%) Strand = Plus / Plus Query: 180 tacaagagcggccgcgtcgagcg 202 ||||||||||||||||||||||| Sbjct: 141833 tacaagagcggccgcgtcgagcg 141855 Score = 46.1 bits (23), Expect = 0.080 Identities = 38/43 (88%) Strand = Plus / Plus Query: 242 cgccaccggcgtggcctccaaggacgtggtcatcgacgccgcc 284 ||||||||| || ||||||||||||| |||||||||| |||| Sbjct: 128459 cgccaccggggtcacctccaaggacgtcgtcatcgacgacgcc 128501 Score = 44.1 bits (22), Expect = 0.31 Identities = 37/42 (88%) Strand = Plus / Minus Query: 237 gaccccgccaccggcgtggcctccaaggacgtggtcatcgac 278 |||||||||| |||||| | |||||||||||| ||| ||||| Sbjct: 131074 gaccccgccaacggcgtcgtctccaaggacgtcgtcctcgac 131033 Score = 44.1 bits (22), Expect = 0.31 Identities = 34/38 (89%) Strand = Plus / Plus Query: 243 gccaccggcgtggcctccaaggacgtggtcatcgacgc 280 ||||||||||| | ||||||||||||||| ||||||| Sbjct: 96882 gccaccggcgtcacgtccaaggacgtggtcgtcgacgc 96919 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 243 gccaccggcgtggcctccaaggacgtggtcatcgac 278 |||||||| ||| | ||||||||||| ||||||||| Sbjct: 136841 gccaccggggtgacgtccaaggacgtcgtcatcgac 136876
>dbj|AK073449.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044C15, full insert sequence Length = 1108 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 243 gccaccggcgtggcctccaaggacgtggtcatcgacgccg 282 ||||||||||| |||||||||||||| ||||||||||||| Sbjct: 776 gccaccggcgtcgcctccaaggacgtcgtcatcgacgccg 737
>dbj|AK067180.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094M19, full insert sequence Length = 1117 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 243 gccaccggcgtggcctccaaggacgtggtcatcgacgccg 282 ||||||||||| |||||||||||||| ||||||||||||| Sbjct: 186 gccaccggcgtcgcctccaaggacgtcgtcatcgacgccg 225
>ref|XM_482926.1| Oryza sativa (japonica cultivar-group), mRNA Length = 990 Score = 60.0 bits (30), Expect = 5e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 236 ggaccccgccaccggcgtggcctccaaggacgtggtcatcgacgcc 281 |||| ||| ||||||||| |||||||||||||||||||||||||| Sbjct: 108 ggacgccgtcaccggcgtcacctccaaggacgtggtcatcgacgcc 153 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 cgctacaagagcggccgcgtc 197 ||||||||||||||||||||| Sbjct: 49 cgctacaagagcggccgcgtc 69
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 177 cgctacaagagcggccgcgtcgagcggttc 206 ||||||||| |||||||||||||||||||| Sbjct: 5846573 cgctacaagggcggccgcgtcgagcggttc 5846602 Score = 44.1 bits (22), Expect = 0.31 Identities = 37/42 (88%) Strand = Plus / Plus Query: 237 gaccccgccaccggcgtggcctccaaggacgtggtcatcgac 278 ||||||||||||||||| | ||||||||||| ||| ||||| Sbjct: 5846633 gaccccgccaccggcgtcacgtccaaggacgtcgtcgtcgac 5846674
>dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0701E03 Length = 183245 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 177 cgctacaagagcggccgcgtcgagcggttc 206 ||||||||| |||||||||||||||||||| Sbjct: 162102 cgctacaagggcggccgcgtcgagcggttc 162131 Score = 44.1 bits (22), Expect = 0.31 Identities = 37/42 (88%) Strand = Plus / Plus Query: 237 gaccccgccaccggcgtggcctccaaggacgtggtcatcgac 278 ||||||||||||||||| | ||||||||||| ||| ||||| Sbjct: 162162 gaccccgccaccggcgtcacgtccaaggacgtcgtcgtcgac 162203
>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0537F07 Length = 147724 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 177 cgctacaagagcggccgcgtcgagcggttc 206 ||||||||| |||||||||||||||||||| Sbjct: 47348 cgctacaagggcggccgcgtcgagcggttc 47377 Score = 44.1 bits (22), Expect = 0.31 Identities = 37/42 (88%) Strand = Plus / Plus Query: 237 gaccccgccaccggcgtggcctccaaggacgtggtcatcgac 278 ||||||||||||||||| | ||||||||||| ||| ||||| Sbjct: 47408 gaccccgccaccggcgtcacgtccaaggacgtcgtcgtcgac 47449
>dbj|AK109407.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-C01, full insert sequence Length = 1270 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 177 cgctacaagagcggccgcgtcgagcggttc 206 ||||||||| |||||||||||||||||||| Sbjct: 147 cgctacaagggcggccgcgtcgagcggttc 176 Score = 44.1 bits (22), Expect = 0.31 Identities = 37/42 (88%) Strand = Plus / Plus Query: 237 gaccccgccaccggcgtggcctccaaggacgtggtcatcgac 278 ||||||||||||||||| | ||||||||||| ||| ||||| Sbjct: 207 gaccccgccaccggcgtcacgtccaaggacgtcgtcgtcgac 248
>dbj|AK109351.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-G08, full insert sequence Length = 1265 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 177 cgctacaagagcggccgcgtcgagcggttc 206 ||||||||| |||||||||||||||||||| Sbjct: 142 cgctacaagggcggccgcgtcgagcggttc 171 Score = 44.1 bits (22), Expect = 0.31 Identities = 37/42 (88%) Strand = Plus / Plus Query: 237 gaccccgccaccggcgtggcctccaaggacgtggtcatcgac 278 ||||||||||||||||| | ||||||||||| ||| ||||| Sbjct: 202 gaccccgccaccggcgtcacgtccaaggacgtcgtcgtcgac 243
>dbj|AK098967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084E12, full insert sequence Length = 1264 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 177 cgctacaagagcggccgcgtcgagcggttc 206 ||||||||| |||||||||||||||||||| Sbjct: 145 cgctacaagggcggccgcgtcgagcggttc 174 Score = 44.1 bits (22), Expect = 0.31 Identities = 37/42 (88%) Strand = Plus / Plus Query: 237 gaccccgccaccggcgtggcctccaaggacgtggtcatcgac 278 ||||||||||||||||| | ||||||||||| ||| ||||| Sbjct: 205 gaccccgccaccggcgtcacgtccaaggacgtcgtcgtcgac 246
>dbj|AK070299.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047F19, full insert sequence Length = 1315 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 177 cgctacaagagcggccgcgtcgagcggttc 206 ||||||||| |||||||||||||||||||| Sbjct: 196 cgctacaagggcggccgcgtcgagcggttc 225 Score = 44.1 bits (22), Expect = 0.31 Identities = 37/42 (88%) Strand = Plus / Plus Query: 237 gaccccgccaccggcgtggcctccaaggacgtggtcatcgac 278 ||||||||||||||||| | ||||||||||| ||| ||||| Sbjct: 256 gaccccgccaccggcgtcacgtccaaggacgtcgtcgtcgac 297
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Plus Query: 331 cgaggagcgggcgcggcggcaggc 354 |||||||||||||||||||||||| Sbjct: 4808853 cgaggagcgggcgcggcggcaggc 4808876 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 ccgccggcgccgccgatgacgacg 141 ||||| |||||||||||||||||| Sbjct: 1193273 ccgcccgcgccgccgatgacgacg 1193250
>dbj|AK108359.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-C08, full insert sequence Length = 1059 Score = 48.1 bits (24), Expect = 0.020 Identities = 36/40 (90%) Strand = Plus / Plus Query: 243 gccaccggcgtggcctccaaggacgtggtcatcgacgccg 282 ||||||||||| | |||||||||||| ||| ||||||||| Sbjct: 137 gccaccggcgtcgtctccaaggacgtcgtcctcgacgccg 176
>dbj|AK071569.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102G04, full insert sequence Length = 1519 Score = 48.1 bits (24), Expect = 0.020 Identities = 36/40 (90%) Strand = Plus / Plus Query: 243 gccaccggcgtggcctccaaggacgtggtcatcgacgccg 282 ||||||||||| ||||||||||||| ||| ||||||||| Sbjct: 370 gccaccggcgtcacctccaaggacgtcgtcctcgacgccg 409
>dbj|AK070294.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050O07, full insert sequence Length = 1333 Score = 48.1 bits (24), Expect = 0.020 Identities = 36/40 (90%) Strand = Plus / Plus Query: 243 gccaccggcgtggcctccaaggacgtggtcatcgacgccg 282 ||||||||||| ||||||||||||| ||| ||||||||| Sbjct: 367 gccaccggcgtcacctccaaggacgtcgtcctcgacgccg 406
>emb|AL607072.15| Mouse DNA sequence from clone RP23-81E16 on chromosome 11 Contains the 3' end of the Ssh2 gene for slingshot homolog 2 (Drosophila), the Coro6 gene for coronin actin binding protein 6, a novel gene, the Git1 gene for G protein-coupled receptor kinase-interactor 1 and the 3' end of a novel gene, complete sequence Length = 90029 Score = 46.1 bits (23), Expect = 0.080 Identities = 23/23 (100%) Strand = Plus / Minus Query: 100 cccacagcctgccggcctccgcc 122 ||||||||||||||||||||||| Sbjct: 75523 cccacagcctgccggcctccgcc 75501
>gb|AC022780.19| Mus musculus chromosome 11, clone RP23-179C3, complete sequence Length = 237498 Score = 46.1 bits (23), Expect = 0.080 Identities = 23/23 (100%) Strand = Plus / Plus Query: 100 cccacagcctgccggcctccgcc 122 ||||||||||||||||||||||| Sbjct: 35160 cccacagcctgccggcctccgcc 35182
>dbj|AK066139.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013054P13, full insert sequence Length = 1314 Score = 46.1 bits (23), Expect = 0.080 Identities = 38/43 (88%) Strand = Plus / Plus Query: 242 cgccaccggcgtggcctccaaggacgtggtcatcgacgccgcc 284 ||||||||| || ||||||||||||| |||||||||| |||| Sbjct: 204 cgccaccggggtcacctccaaggacgtcgtcatcgacgacgcc 246
>ref|XM_464437.1| Oryza sativa (japonica cultivar-group), mRNA Length = 366 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 110 gccggcctccgccggcgccgcc 131 |||||||||||||||||||||| Sbjct: 273 gccggcctccgccggcgccgcc 252
>gb|CP000145.1| Rhodobacter sphaeroides 2.4.1 plasmid B, complete sequence Length = 114178 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 191 ccgcgtcgagcggttcgtgggc 212 |||||||||||||||||||||| Sbjct: 111869 ccgcgtcgagcggttcgtgggc 111848
>gb|AC115722.12| Mus musculus chromosome 5, clone RP23-16N23, complete sequence Length = 194380 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 148 tcgacttcttcttcttccctttcctg 173 ||||||||||||||||||| |||||| Sbjct: 107744 tcgacttcttcttcttcccattcctg 107769
>gb|AC127578.4| Mus musculus BAC clone RP23-428L14 from chromosome 15, complete sequence Length = 206410 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 152 cttcttcttcttccctttcctg 173 |||||||||||||||||||||| Sbjct: 68588 cttcttcttcttccctttcctg 68567
>ref|XM_587288.2| PREDICTED: Bos taurus similar to wolframin (LOC510176), partial mRNA Length = 2552 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 148 tcgacttcttcttcttccctttcctg 173 ||||||||||||||||||| |||||| Sbjct: 2398 tcgacttcttcttcttccccttcctg 2423
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 187 gcggccgcgtcgagcggttcgt 208 |||||||||||||||||||||| Sbjct: 3926498 gcggccgcgtcgagcggttcgt 3926477
>emb|AJ865214.1| Cocos nucifera microsatellite DNA, clone CnCir 115 Length = 278 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 148 tcgacttcttcttcttcccttt 169 |||||||||||||||||||||| Sbjct: 19 tcgacttcttcttcttcccttt 40
>gb|BC046988.1| Mus musculus Wolfram syndrome 1 homolog (human), mRNA (cDNA clone MGC:54625 IMAGE:6492038), complete cds Length = 3523 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 148 tcgacttcttcttcttccctttcctg 173 ||||||||||||||||||| |||||| Sbjct: 2694 tcgacttcttcttcttcccattcctg 2719
>ref|NM_031823.1| Rattus norvegicus Wolfram syndrome 1 homolog (human) (Wfs1), mRNA Length = 2742 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 148 tcgacttcttcttcttccctttcctg 173 ||||||||||||||||||| |||||| Sbjct: 2653 tcgacttcttcttcttcccattcctg 2678
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 187 gcggccgcgtcgagcggttcgt 208 |||||||||||||||||||||| Sbjct: 3668361 gcggccgcgtcgagcggttcgt 3668340
>emb|CR860716.1| Pongo pygmaeus mRNA; cDNA DKFZp459N2027 (from clone DKFZp459N2027) Length = 3708 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 148 tcgacttcttcttcttccctttcctg 173 ||||||||||||||||||| |||||| Sbjct: 2788 tcgacttcttcttcttcccgttcctg 2813
>gb|AE012067.1| Xanthomonas axonopodis pv. citri str. 306, section 445 of 469 of the complete genome Length = 11243 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 67 cgggtgcgctgctcgctccctctccc 92 |||| ||||||||||||||||||||| Sbjct: 2253 cgggagcgctgctcgctccctctccc 2278
>dbj|AK144561.1| Mus musculus 16 days neonate male diencephalon cDNA, RIKEN full-length enriched library, clone:G630097N15 product:Wolfram syndrome 1 homolog (human), full insert sequence Length = 3285 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 148 tcgacttcttcttcttccctttcctg 173 ||||||||||||||||||| |||||| Sbjct: 2482 tcgacttcttcttcttcccattcctg 2507
>dbj|AK145023.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN full-length enriched library, clone:G830027H05 product:Wolfram syndrome 1 homolog (human), full insert sequence Length = 3554 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 148 tcgacttcttcttcttccctttcctg 173 ||||||||||||||||||| |||||| Sbjct: 2730 tcgacttcttcttcttcccattcctg 2755
>ref|NM_011716.1| Mus musculus Wolfram syndrome 1 homolog (human) (Wfs1), mRNA Length = 3530 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 148 tcgacttcttcttcttccctttcctg 173 ||||||||||||||||||| |||||| Sbjct: 2685 tcgacttcttcttcttcccattcctg 2710
>dbj|AK170180.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630025G08 product:Wolfram syndrome 1 homolog (human), full insert sequence Length = 3538 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 148 tcgacttcttcttcttccctttcctg 173 ||||||||||||||||||| |||||| Sbjct: 2713 tcgacttcttcttcttcccattcctg 2738
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 187 gcggccgcgtcgagcggttcgt 208 |||||||||||||||||||||| Sbjct: 515581 gcggccgcgtcgagcggttcgt 515602 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 cggcggcaggctgccgctcg 363 |||||||||||||||||||| Sbjct: 2211708 cggcggcaggctgccgctcg 2211727
>gb|AF136378.1|AF136378 Rattus norvegicus WFS1 (Wfs1) mRNA, complete cds Length = 2742 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 148 tcgacttcttcttcttccctttcctg 173 ||||||||||||||||||| |||||| Sbjct: 2653 tcgacttcttcttcttcccattcctg 2678
>dbj|AP004650.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1540_G08 Length = 126263 Score = 44.1 bits (22), Expect = 0.31 Identities = 31/34 (91%) Strand = Plus / Minus Query: 114 gcctccgccggcgccgccgatgacgacggggacg 147 |||||||||| |||||||| ||||||||||||| Sbjct: 13820 gcctccgccgccgccgccggcgacgacggggacg 13787
>dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0437H03 Length = 170173 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 110 gccggcctccgccggcgccgcc 131 |||||||||||||||||||||| Sbjct: 111420 gccggcctccgccggcgccgcc 111399
>dbj|AK062676.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-G12, full insert sequence Length = 1229 Score = 44.1 bits (22), Expect = 0.31 Identities = 37/42 (88%) Strand = Plus / Plus Query: 237 gaccccgccaccggcgtggcctccaaggacgtggtcatcgac 278 |||||||||| |||||| | |||||||||||| ||| ||||| Sbjct: 209 gaccccgccaacggcgtcgtctccaaggacgtcgtcctcgac 250
>gb|AF084482.1|AF084482 Mus musculus transmembrane protein (Wfs1) mRNA, complete cds Length = 3512 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 148 tcgacttcttcttcttccctttcctg 173 ||||||||||||||||||| |||||| Sbjct: 2691 tcgacttcttcttcttcccattcctg 2716
>emb|AJ011971.1|MMU011971 Mus musculus mRNA for wolframin Length = 3530 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 148 tcgacttcttcttcttccctttcctg 173 ||||||||||||||||||| |||||| Sbjct: 2685 tcgacttcttcttcttcccattcctg 2710
>ref|XM_528147.1| PREDICTED: Pan troglodytes similar to CHD7 protein (LOC472775), mRNA Length = 1260 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 ctgctcgctccctctccccgc 95 ||||||||||||||||||||| Sbjct: 413 ctgctcgctccctctccccgc 393
>gb|BT018514.1| Zea mays clone EL01N0430E04.d mRNA sequence Length = 1271 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 179 ctacaagagcggccgcgtcgagcgg 203 |||||||||||||||| |||||||| Sbjct: 149 ctacaagagcggccgcatcgagcgg 173
>gb|AC137004.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0615D12, complete sequence Length = 155402 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 cggcctccgccggcgccgccg 132 ||||||||||||||||||||| Sbjct: 80708 cggcctccgccggcgccgccg 80728
>gb|BC051264.1| Homo sapiens chromodomain helicase DNA binding protein 7, mRNA (cDNA clone IMAGE:3636644), partial cds Length = 2194 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 ctgctcgctccctctccccgc 95 ||||||||||||||||||||| Sbjct: 364 ctgctcgctccctctccccgc 344
>ref|NM_017780.2| Homo sapiens chromodomain helicase DNA binding protein 7 (CHD7), mRNA Length = 10469 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 ctgctcgctccctctccccgc 95 ||||||||||||||||||||| Sbjct: 8624 ctgctcgctccctctccccgc 8604
>ref|XM_654469.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1957.2), mRNA Length = 1854 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 ggcctccgccggcgccgccga 133 ||||||||||||||||||||| Sbjct: 1119 ggcctccgccggcgccgccga 1139
>gb|AC155248.2| Mus musculus BAC clone RP24-243O10 from chromosome 13, complete sequence Length = 181818 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 cttcttcttcttccctttcct 172 ||||||||||||||||||||| Sbjct: 85794 cttcttcttcttccctttcct 85814
>ref|XM_854906.1| PREDICTED: Canis familiaris similar to WD repeat domain 66, transcript variant 2 (LOC477466), mRNA Length = 3624 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 cttcttcttcttccctttcct 172 ||||||||||||||||||||| Sbjct: 247 cttcttcttcttccctttcct 227
>ref|XM_534664.2| PREDICTED: Canis familiaris similar to WD repeat domain 66, transcript variant 1 (LOC477466), mRNA Length = 3606 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 cttcttcttcttccctttcct 172 ||||||||||||||||||||| Sbjct: 229 cttcttcttcttccctttcct 209
>gb|AC122806.4| Mus musculus BAC clone RP23-297C11 from 8, complete sequence Length = 184206 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 cttcttcttcttccctttcct 172 ||||||||||||||||||||| Sbjct: 11574 cttcttcttcttccctttcct 11554
>emb|CR861477.1| Human DNA sequence from clone XX-NCIH2171_4G20, complete sequence Length = 121004 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 ctgctcgctccctctccccgc 95 ||||||||||||||||||||| Sbjct: 111945 ctgctcgctccctctccccgc 111925
>emb|CR856000.1| Human DNA sequence from clone XX-NCIH2171_4H19, complete sequence Length = 121005 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 ctgctcgctccctctccccgc 95 ||||||||||||||||||||| Sbjct: 111946 ctgctcgctccctctccccgc 111926
>emb|CR812473.1| Human DNA sequence from clone XX-NCIH2171_18L10, complete sequence Length = 128736 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 ctgctcgctccctctccccgc 95 ||||||||||||||||||||| Sbjct: 115817 ctgctcgctccctctccccgc 115797
>gb|AF518005.1| Homo sapiens cyclin D2 (CCND2) gene, complete cds Length = 33528 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 ctccctctccccgcgctcccc 102 ||||||||||||||||||||| Sbjct: 411 ctccctctccccgcgctcccc 391
>gb|AC113143.3| Homo sapiens chromosome 8, clone RP11-33I11, complete sequence Length = 157672 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 ctgctcgctccctctccccgc 95 ||||||||||||||||||||| Sbjct: 110619 ctgctcgctccctctccccgc 110599
>gb|AC091545.4| Homo sapiens chromosome 8, clone RP3-491L6, complete sequence Length = 75148 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 ctgctcgctccctctccccgc 95 ||||||||||||||||||||| Sbjct: 21568 ctgctcgctccctctccccgc 21548
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 344 cggcggcaggctgccgctcgtcgtg 368 ||||||| ||||||||||||||||| Sbjct: 1672853 cggcggcgggctgccgctcgtcgtg 1672829
>gb|AC006122.24| Homo sapiens 12 BAC RP11-264F23 (Roswell Park Cancer Institute Human Bac Library) complete sequence Length = 127957 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ctccctctccccgcgctcccc 102 ||||||||||||||||||||| Sbjct: 62509 ctccctctccccgcgctcccc 62529
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 106 gcctgccggcctccgccggcgccgc 130 ||||||||||| ||||||||||||| Sbjct: 19153411 gcctgccggccgccgccggcgccgc 19153387 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 118 ccgccggcgccgccgatgacgacg 141 |||||| ||||||||||||||||| Sbjct: 34569731 ccgccgccgccgccgatgacgacg 34569754 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 120 gccggcgccgccgatgacgacggggacg 147 |||||||||||||| |||||||| |||| Sbjct: 22362157 gccggcgccgccgaagacgacggcgacg 22362184
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 cggcctccgccggcgccgccg 132 ||||||||||||||||||||| Sbjct: 21689532 cggcctccgccggcgccgccg 21689552
>gb|AC153556.5| Mus musculus 10 BAC RP23-395M5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 184751 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 ttcttcttcttccctttcctg 173 ||||||||||||||||||||| Sbjct: 141521 ttcttcttcttccctttcctg 141501
>gb|AC112512.6| Homo sapiens 3 BAC RP11-717D12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 176910 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 154 tcttcttcttccctttcctgg 174 ||||||||||||||||||||| Sbjct: 116988 tcttcttcttccctttcctgg 117008
>dbj|AK000364.1| Homo sapiens cDNA FLJ20357 fis, clone HEP16545 Length = 3082 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 ctgctcgctccctctccccgc 95 ||||||||||||||||||||| Sbjct: 1237 ctgctcgctccctctccccgc 1217
>gb|AC167667.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940123D9, complete sequence Length = 121336 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 123 ggcgccgccgatgacgacggggacgtcga 151 ||||||||||| || |||||||||||||| Sbjct: 7263 ggcgccgccgacgatgacggggacgtcga 7235
>emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053B21, complete sequence Length = 151936 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 106 gcctgccggcctccgccggcgccgc 130 ||||||||||| ||||||||||||| Sbjct: 86931 gcctgccggccgccgccggcgccgc 86907
>gb|AC149592.2| Mus musculus BAC clone RP23-270M4 from 14, complete sequence Length = 204601 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 cttcttcttcttccctttcct 172 ||||||||||||||||||||| Sbjct: 199260 cttcttcttcttccctttcct 199240
>gb|AC167967.6| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940144D9, complete sequence Length = 114276 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 123 ggcgccgccgatgacgacggggacgtcga 151 |||||||||||||||||||| ||| |||| Sbjct: 28970 ggcgccgccgatgacgacggcgacctcga 28942
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 ccggcctccgccggcgccgcc 131 ||||||||||||||||||||| Sbjct: 3217165 ccggcctccgccggcgccgcc 3217185
>emb|AL833190.1|HSM804501 Homo sapiens mRNA; cDNA DKFZp667M015 (from clone DKFZp667M015) Length = 4223 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 ctgctcgctccctctccccgc 95 ||||||||||||||||||||| Sbjct: 4184 ctgctcgctccctctccccgc 4164
>gb|AC130472.2| Homo sapiens chromosome 3 clone RP11-395P16, complete sequence Length = 194160 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 154 tcttcttcttccctttcctgg 174 ||||||||||||||||||||| Sbjct: 12538 tcttcttcttccctttcctgg 12558
>dbj|AB037837.1| Homo sapiens mRNA for KIAA1416 protein, partial cds Length = 5901 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 ctgctcgctccctctccccgc 95 ||||||||||||||||||||| Sbjct: 5861 ctgctcgctccctctccccgc 5841
>gb|AC164069.9| Mus musculus chromosome 15, clone RP23-422H17, complete sequence Length = 216364 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 ggagcgggcgcggcggcaggctgc 357 ||||||||||||||||| |||||| Sbjct: 196525 ggagcgggcgcggcggcgggctgc 196548
>ref|XM_483361.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2064 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 gaggagcgggcgcggcggca 351 |||||||||||||||||||| Sbjct: 1768 gaggagcgggcgcggcggca 1787
>ref|XM_482928.1| Oryza sativa (japonica cultivar-group), mRNA Length = 963 Score = 40.1 bits (20), Expect = 4.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 229 cctccgtggaccccgccaccggcgtggcctcc 260 ||||||| ||| ||||||||||||| |||||| Sbjct: 104 cctccgtcgacgccgccaccggcgtcgcctcc 135
>ref|XM_462667.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1749 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 120 gccggcgccgccgatgacgacggggacg 147 |||||||||||||| |||||||| |||| Sbjct: 168 gccggcgccgccgaagacgacggcgacg 141
>ref|XM_463509.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1071 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 ccgccggcgccgccgatgacgacg 141 |||||| ||||||||||||||||| Sbjct: 73 ccgccgccgccgccgatgacgacg 50
>ref|XM_478528.1| Oryza sativa (japonica cultivar-group), mRNA Length = 612 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 ccgccggcgccgccgatgacgacg 141 |||||| ||||||||||||||||| Sbjct: 556 ccgccgccgccgccgatgacgacg 533
>gb|AF119636.1| Polistes pacificus microsatellite Pbe269 sequence Length = 103 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 acttcttcttcttccctttc 170 |||||||||||||||||||| Sbjct: 20 acttcttcttcttccctttc 1
>gb|AY022686.1| Oryza sativa microsatellite MRG5011 containing (CCG)X8, closest to marker C1467, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 118 ccgccggcgccgccgatgacgacg 141 |||||| ||||||||||||||||| Sbjct: 110 ccgccgccgccgccgatgacgacg 133
>gb|AC096684.3| Takifugu rubripes clone 241N7, complete sequence Length = 84793 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 tccctctccccgcgctcccc 102 |||||||||||||||||||| Sbjct: 43089 tccctctccccgcgctcccc 43108
>gb|AC154385.2| Mus musculus BAC clone RP23-23O22 from chromosome 17, complete sequence Length = 221564 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 cttcttcttccctttcctgg 174 |||||||||||||||||||| Sbjct: 108748 cttcttcttccctttcctgg 108767
>gb|AC162693.5| Mus musculus chromosome 15, clone RP24-89G21, complete sequence Length = 159813 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 ggagcgggcgcggcggcaggctgc 357 ||||||||||||||||| |||||| Sbjct: 46842 ggagcgggcgcggcggcgggctgc 46865
>ref|XM_952337.1| Neurospora crassa OR74A hypothetical protein (NCU07205.1) partial mRNA Length = 1590 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cttcttcttcttccctttcc 171 |||||||||||||||||||| Sbjct: 1121 cttcttcttcttccctttcc 1140
>gb|AC113439.14| Mus musculus chromosome 10, clone RP23-193K15, complete sequence Length = 205857 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 152 cttcttcttcttccctttcctggt 175 ||||||||||||| |||||||||| Sbjct: 36192 cttcttcttcttctctttcctggt 36169
>ref|XM_327490.1| Neurospora crassa OR74A hypothetical protein (NCU07205.1) partial mRNA Length = 1590 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cttcttcttcttccctttcc 171 |||||||||||||||||||| Sbjct: 1121 cttcttcttcttccctttcc 1140
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 cggcggcaggctgccgctcg 363 |||||||||||||||||||| Sbjct: 1728153 cggcggcaggctgccgctcg 1728172
>gb|AY392153.1| Schistosoma bovis nicotinic acetylcholine receptor non-alpha subunit precursor, mRNA, complete cds Length = 2423 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 ccgccggcgccgccgatgacgacg 141 |||||| ||||||||||||||||| Sbjct: 1973 ccgccgccgccgccgatgacgacg 1950
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cttcttcttcttccctttcc 171 |||||||||||||||||||| Sbjct: 3183043 cttcttcttcttccctttcc 3183062
>gb|AC146102.2| Pan troglodytes BAC clone RP43-21L13 from 7, complete sequence Length = 191971 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 ttcttcttcttccctttcct 172 |||||||||||||||||||| Sbjct: 146310 ttcttcttcttccctttcct 146329
>ref|XM_539234.2| PREDICTED: Canis familiaris similar to Wolfram syndrome 1 (LOC482113), mRNA Length = 2667 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 150 gacttcttcttcttccctttcctg 173 ||||||||||||||||| |||||| Sbjct: 2632 gacttcttcttcttcccgttcctg 2655
>ref|XM_444890.1| Candida glabrata CBS138 hypothetical protein (CAGL0A02860g) partial mRNA Length = 1209 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 cttcttcttcttccctttcc 171 |||||||||||||||||||| Sbjct: 90 cttcttcttcttccctttcc 71
>gb|AC123948.4| Mus musculus BAC clone RP23-105C3 from chromosome 10, complete sequence Length = 214819 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 152 cttcttcttcttccctttcctggt 175 ||||||||||||| |||||||||| Sbjct: 205827 cttcttcttcttctctttcctggt 205804
>gb|AC121933.3| Mus musculus BAC clone RP24-206I11 from chromosome 8, complete sequence Length = 182816 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 cttcttcttcttccctttcc 171 |||||||||||||||||||| Sbjct: 151358 cttcttcttcttccctttcc 151339
>gb|AC102114.9| Mus musculus chromosome 10, clone RP23-139F20, complete sequence Length = 232173 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 tcttcttcttccctttcctg 173 |||||||||||||||||||| Sbjct: 53445 tcttcttcttccctttcctg 53426
>gb|AC142285.1| Pan troglodytes BAC clone RP43-169B4 from 7, complete sequence Length = 170237 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 ttcttcttcttccctttcct 172 |||||||||||||||||||| Sbjct: 166240 ttcttcttcttccctttcct 166259
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 cacggacaccgtgccggcct 231 |||||||||||||||||||| Sbjct: 5110870 cacggacaccgtgccggcct 5110889
>ref|XM_790616.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC591032 (LOC591032), partial mRNA Length = 1214 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 tcttcttcttccctttcctg 173 |||||||||||||||||||| Sbjct: 183 tcttcttcttccctttcctg 164
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 gcctccgccggcgccgccga 133 |||||||||||||||||||| Sbjct: 1072873 gcctccgccggcgccgccga 1072892
>ref|XM_965580.1| PREDICTED: Tribolium castaneum similar to CG31025-PB, isoform B (LOC659255), mRNA Length = 3924 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 acttcttcttcttccctttc 170 |||||||||||||||||||| Sbjct: 3922 acttcttcttcttccctttc 3903
>ref|XM_778377.1| PREDICTED: Strongylocentrotus purpuratus similar to remodeling and spacing factor 1 (LOC578189), mRNA Length = 4926 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 tcttcttcttccctttcctg 173 |||||||||||||||||||| Sbjct: 3892 tcttcttcttccctttcctg 3873
>emb|CR380947.1| Candida glabrata strain CBS138 chromosome A complete sequence Length = 485192 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cttcttcttcttccctttcc 171 |||||||||||||||||||| Sbjct: 297163 cttcttcttcttccctttcc 297182
>gb|AC163034.4| Mus musculus BAC clone RP23-394C13 from chromosome 12, complete sequence Length = 187877 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 gcctccgccggcgccgccga 133 |||||||||||||||||||| Sbjct: 87484 gcctccgccggcgccgccga 87465
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 cggcggcaggctgccgctcg 363 |||||||||||||||||||| Sbjct: 3063027 cggcggcaggctgccgctcg 3063046
>emb|BX294027.1|NCB8G12 Neurospora crassa DNA linkage group V BAC contig B8G12 Length = 154038 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cttcttcttcttccctttcc 171 |||||||||||||||||||| Sbjct: 53734 cttcttcttcttccctttcc 53753
>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29 Length = 302007 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 117 tccgccggcgccgccgatgacgacgggg 144 ||||||||||||||||| | |||||||| Sbjct: 284021 tccgccggcgccgccgacgccgacgggg 283994
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 ggcgccgccgatgacgacgg 142 |||||||||||||||||||| Sbjct: 269844 ggcgccgccgatgacgacgg 269825
>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29 Length = 299050 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 tccgccggcgccgccgatgacgacgggg 144 ||||||||||||||||| | |||||||| Sbjct: 17987 tccgccggcgccgccgacgccgacgggg 18014
>gb|AF521085.1| Streptomyces nanchangensis NS3226 polyether ionophore nanchangmycin biosynthetic gene cluster, complete sequence Length = 132544 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 cggcgccgccgatgacgacg 141 |||||||||||||||||||| Sbjct: 44852 cggcgccgccgatgacgacg 44871
>emb|AL606668.2|OSJN00083 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064G10, complete sequence Length = 150206 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 118 ccgccggcgccgccgatgacgacg 141 |||||| ||||||||||||||||| Sbjct: 23852 ccgccgccgccgccgatgacgacg 23875
>gb|AC006439.4| Arabidopsis thaliana chromosome 2 clone T30D6 map mi39, complete sequence Length = 92861 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cttcttcttcttccctttcc 171 |||||||||||||||||||| Sbjct: 25037 cttcttcttcttccctttcc 25056
>dbj|AK149870.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530024G04 product:hypothetical Cysteine-rich region profile/EGF-like domain containing protein, full insert sequence Length = 3935 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 tcttcttcttccctttcctg 173 |||||||||||||||||||| Sbjct: 3070 tcttcttcttccctttcctg 3051
>gb|AC161061.2| Pan troglodytes BAC clone CH251-489A6 from chromosome 7, complete sequence Length = 177652 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 ttcttcttcttccctttcct 172 |||||||||||||||||||| Sbjct: 78331 ttcttcttcttccctttcct 78350
>gb|AC140419.8| Mus musculus BAC clone RP24-435P9 from chromosome 3, complete sequence Length = 157093 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 cttcttcttcttccctttcc 171 |||||||||||||||||||| Sbjct: 126761 cttcttcttcttccctttcc 126742 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 cttcttcttcttccctttcc 171 |||||||||||||||||||| Sbjct: 126444 cttcttcttcttccctttcc 126425 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 cttcttcttcttccctttcc 171 |||||||||||||||||||| Sbjct: 126006 cttcttcttcttccctttcc 125987 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 cttcttcttcttccctttcc 171 |||||||||||||||||||| Sbjct: 125851 cttcttcttcttccctttcc 125832
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 gcgggcgcggcggcaggctg 356 |||||||||||||||||||| Sbjct: 1430958 gcgggcgcggcggcaggctg 1430977
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 ccgccggcgccgccgatgacgacg 141 |||||| ||||||||||||||||| Sbjct: 20733931 ccgccgccgccgccgatgacgacg 20733908
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cttcttcttcttccctttcc 171 |||||||||||||||||||| Sbjct: 3183154 cttcttcttcttccctttcc 3183173
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 118 ccgccggcgccgccgatgacgacg 141 |||||| ||||||||||||||||| Sbjct: 37952158 ccgccgccgccgccgatgacgacg 37952181
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 4.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 271 tcatcgacgccgccgcggngctg 293 |||||||||||||||||| |||| Sbjct: 1746239 tcatcgacgccgccgcggagctg 1746261
>gb|AC092593.2| Homo sapiens BAC clone RP11-68D16 from 4, complete sequence Length = 128255 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 gtgaggtaatttgatcatgg 24 |||||||||||||||||||| Sbjct: 57504 gtgaggtaatttgatcatgg 57485
>gb|AC114582.12| Mus musculus chromosome 7, clone RP23-192M19, complete sequence Length = 201839 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cttcttcttcttccctttcc 171 |||||||||||||||||||| Sbjct: 181470 cttcttcttcttccctttcc 181489
>gb|AC102022.8| Mus musculus chromosome 8, clone RP24-67K5, complete sequence Length = 156728 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 cttcttcttcttccctttcc 171 |||||||||||||||||||| Sbjct: 76484 cttcttcttcttccctttcc 76465
>gb|AF301903.1|AF301903 Phanerochaete chrysosporium strain ME446 endo-1,4-B-xylanase A (xynA) gene, xynA-B allele, complete cds Length = 1799 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 tccgcatctacctgccgagc 317 |||||||||||||||||||| Sbjct: 60 tccgcatctacctgccgagc 79
>gb|AF301902.1|AF301902 Phanerochaete chrysosporium strain ME446 endo-1,4-B-xylanase A (xynA) gene, xynA-A allele, complete cds Length = 1800 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 tccgcatctacctgccgagc 317 |||||||||||||||||||| Sbjct: 60 tccgcatctacctgccgagc 79
>gb|AC119797.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0083G16, complete sequence Length = 145590 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cttcttcttcttccctttcc 171 |||||||||||||||||||| Sbjct: 7916 cttcttcttcttccctttcc 7935
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 ggcgccgccgatgacgacgg 142 |||||||||||||||||||| Sbjct: 8688215 ggcgccgccgatgacgacgg 8688196 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 cgtggaccccgccaccggcg 252 |||||||||||||||||||| Sbjct: 3186844 cgtggaccccgccaccggcg 3186825
>gb|AE004453.1| Pseudomonas aeruginosa PAO1, section 14 of 529 of the complete genome Length = 14568 Score = 40.1 bits (20), Expect = 4.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 266 cgtggtcatcgacgccgccgcggngctggcc 296 ||||| ||||||||||||||| | ||||||| Sbjct: 2510 cgtggccatcgacgccgccgccgcgctggcc 2540
>gb|AC092463.5| Homo sapiens BAC clone RP11-326F6 from 4, complete sequence Length = 132117 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 gctccctctccccgcgctccccac 104 |||||||||||||| ||||||||| Sbjct: 93746 gctccctctccccgtgctccccac 93769
>dbj|AP003297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698A10 Length = 137348 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 118 ccgccggcgccgccgatgacgacg 141 |||||| ||||||||||||||||| Sbjct: 33102 ccgccgccgccgccgatgacgacg 33125
>gb|AF486630.1| Amycolatopsis orientalis peptide synthetase gene, partial cds; hypothetical protein, OxyA (oxyA), OxyB (oxyB), and OxyC (oxyC) genes, complete cds; and halogenase gene, partial cds Length = 6320 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 caaggacgtggtcatcgacg 279 |||||||||||||||||||| Sbjct: 4872 caaggacgtggtcatcgacg 4891
>dbj|AP004559.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0461A06 Length = 136384 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 cggcctccgccggcgccgcc 131 |||||||||||||||||||| Sbjct: 135855 cggcctccgccggcgccgcc 135874
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 gcgcggcggcaggctgccgc 360 |||||||||||||||||||| Sbjct: 2190862 gcgcggcggcaggctgccgc 2190881
>dbj|AP006057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1342C04 Length = 172097 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 245 caccggcgtggcctccaaggacgtggtcatcgacgc 280 ||||||||| ||||||| ||||| ||||||||||| Sbjct: 58734 caccggcgtcacctccaaagacgtcgtcatcgacgc 58699
>dbj|AP005655.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0025H07 Length = 145605 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 245 caccggcgtggcctccaaggacgtggtcatcgacgc 280 ||||||||| ||||||| ||||| ||||||||||| Sbjct: 111636 caccggcgtcacctccaaagacgtcgtcatcgacgc 111601
>dbj|AP005509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1003_A09 Length = 150755 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 gaggagcgggcgcggcggca 351 |||||||||||||||||||| Sbjct: 24229 gaggagcgggcgcggcggca 24210
>dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0689E12 Length = 147516 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 gaggagcgggcgcggcggca 351 |||||||||||||||||||| Sbjct: 110653 gaggagcgggcgcggcggca 110634
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 ccgccggcgccgccgatgacgacg 141 |||||| ||||||||||||||||| Sbjct: 86681 ccgccgccgccgccgatgacgacg 86658
>dbj|AB164414.1| Hemicentrotus pulcherrimus mRNA for unichrom, complete cds Length = 5115 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 tcttcttcttccctttcctg 173 |||||||||||||||||||| Sbjct: 3892 tcttcttcttccctttcctg 3873
>dbj|AP005603.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1047A05 Length = 157517 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 cggcctccgccggcgccgcc 131 |||||||||||||||||||| Sbjct: 31996 cggcctccgccggcgccgcc 32015
>dbj|AP004154.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1111_E05 Length = 126978 Score = 40.1 bits (20), Expect = 4.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 229 cctccgtggaccccgccaccggcgtggcctcc 260 ||||||| ||| ||||||||||||| |||||| Sbjct: 1450 cctccgtcgacgccgccaccggcgtcgcctcc 1481
>dbj|AK121530.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030N24, full insert sequence Length = 1340 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 118 ccgccggcgccgccgatgacgacg 141 |||||| ||||||||||||||||| Sbjct: 701 ccgccgccgccgccgatgacgacg 724
>dbj|AK120686.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013168D07, full insert sequence Length = 2304 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 243 gccaccggcgtggcctccaaggacgtggtcatcgac 278 |||||||| ||| | ||||||||||| ||||||||| Sbjct: 457 gccaccggggtgacgtccaaggacgtcgtcatcgac 492
>dbj|AK119315.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-H04, full insert sequence Length = 3590 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 ccgccggcgccgccgatgacgacg 141 |||||| ||||||||||||||||| Sbjct: 91 ccgccgccgccgccgatgacgacg 68
>dbj|AK111595.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091G05, full insert sequence Length = 3645 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cttcttcttcttccctttcc 171 |||||||||||||||||||| Sbjct: 25 cttcttcttcttccctttcc 44
>dbj|AK106468.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-H08, full insert sequence Length = 1252 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 120 gccggcgccgccgatgacgacggggacg 147 |||||||||||||| |||||||| |||| Sbjct: 859 gccggcgccgccgaagacgacggcgacg 886
>dbj|AK105811.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-C02, full insert sequence Length = 1522 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 243 gccaccggcgtggcctccaaggacgtggtcatcgac 278 |||||||| ||| | ||||||||||| ||||||||| Sbjct: 461 gccaccggggtgacgtccaaggacgtcgtcatcgac 496
>dbj|AK105063.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-D07, full insert sequence Length = 1718 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 ccgccggcgccgccgatgacgacg 141 |||||| ||||||||||||||||| Sbjct: 90 ccgccgccgccgccgatgacgacg 67
>dbj|AK103577.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132P11, full insert sequence Length = 2546 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 ccgccggcgccgccgatgacgacg 141 |||||| ||||||||||||||||| Sbjct: 87 ccgccgccgccgccgatgacgacg 64
>dbj|AK073690.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033055I24, full insert sequence Length = 2067 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 120 gccggcgccgccgatgacgacggggacg 147 |||||||||||||| |||||||| |||| Sbjct: 203 gccggcgccgccgaagacgacggcgacg 176
>dbj|AK068197.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013140N02, full insert sequence Length = 4012 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 243 gccaccggcgtggcctccaaggacgtggtcatcgac 278 |||||||| ||| | ||||||||||| ||||||||| Sbjct: 2779 gccaccggggtgacgtccaaggacgtcgtcatcgac 2814
>dbj|AK065991.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013046K16, full insert sequence Length = 1948 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 ccgccggcgccgccgatgacgacg 141 |||||| ||||||||||||||||| Sbjct: 87 ccgccgccgccgccgatgacgacg 64
>dbj|AK065916.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045N02, full insert sequence Length = 1324 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 ccgccggcgccgccgatgacgacg 141 |||||| ||||||||||||||||| Sbjct: 104 ccgccgccgccgccgatgacgacg 81
>dbj|AK063390.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-H01, full insert sequence Length = 1576 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 243 gccaccggcgtggcctccaaggacgtggtcatcgac 278 |||||||| ||| | ||||||||||| ||||||||| Sbjct: 910 gccaccggggtgacgtccaaggacgtcgtcatcgac 875
>dbj|AK061010.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-A12, full insert sequence Length = 1083 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 245 caccggcgtggcctccaaggacgtggtcatcgacgc 280 ||||||||| ||||||| ||||| ||||||||||| Sbjct: 188 caccggcgtcacctccaaagacgtcgtcatcgacgc 223
>emb|AL732350.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0101F08, complete sequence Length = 63897 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 118 ccgccggcgccgccgatgacgacg 141 |||||| ||||||||||||||||| Sbjct: 23267 ccgccgccgccgccgatgacgacg 23290
>gb|AC122205.6| Mus musculus BAC clone RP23-76C13 from chromosome 8, complete sequence Length = 249808 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cttcttcttcttccctttcc 171 |||||||||||||||||||| Sbjct: 5150 cttcttcttcttccctttcc 5169
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 cggcggcaggctgccgctcg 363 |||||||||||||||||||| Sbjct: 2831230 cggcggcaggctgccgctcg 2831249
>gb|U68299.1|MCU68299 Mouse cytomegalovirus 1 complete genomic sequence Length = 230278 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 gatgacgacggggacgtcga 151 |||||||||||||||||||| Sbjct: 135285 gatgacgacggggacgtcga 135304
>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22, complete sequence Length = 147214 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 120 gccggcgccgccgatgacgacggggacg 147 |||||||||||||| |||||||| |||| Sbjct: 113061 gccggcgccgccgaagacgacggcgacg 113088
>gb|AC153695.2| Mus musculus 10 BAC RP23-184L5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse 10 BAC Library) complete sequence Length = 209875 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 tcttcttcttccctttcctg 173 |||||||||||||||||||| Sbjct: 109942 tcttcttcttccctttcctg 109961
>emb|AL672170.11| Mouse DNA sequence from clone RP23-435C17 on chromosome X, complete sequence Length = 205023 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cttcttcttcttccctttcc 171 |||||||||||||||||||| Sbjct: 185948 cttcttcttcttccctttcc 185967
>gb|AC117665.6| Mus musculus chromosome 8, clone RP23-360I9, complete sequence Length = 217058 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cttcttcttcttccctttcc 171 |||||||||||||||||||| Sbjct: 141141 cttcttcttcttccctttcc 141160
>dbj|AB019147.1| Mus musculus gene for zinc finger transcription factor Sp4, partial cds Length = 4515 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 gcctccgccggcgccgccga 133 |||||||||||||||||||| Sbjct: 3632 gcctccgccggcgccgccga 3613
>emb|AL645824.12| Mouse DNA sequence from clone RP23-200O20 on chromosome 4, complete sequence Length = 145443 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 ttcttcttcttccctttcct 172 |||||||||||||||||||| Sbjct: 112286 ttcttcttcttccctttcct 112267
>dbj|AP003922.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0648C09 Length = 107522 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 118 ccgccggcgccgccgatgacgacg 141 |||||| ||||||||||||||||| Sbjct: 48434 ccgccgccgccgccgatgacgacg 48457 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,776,339 Number of Sequences: 3902068 Number of extensions: 3776339 Number of successful extensions: 111310 Number of sequences better than 10.0: 172 Number of HSP's better than 10.0 without gapping: 179 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 106737 Number of HSP's gapped (non-prelim): 4573 length of query: 369 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 347 effective length of database: 17,147,199,772 effective search space: 5950078320884 effective search space used: 5950078320884 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
