ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast50c11 |
|---|---|
| Clone Library Name | barley_pub |
>DKC1_ARATH (Q9LD90) H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-)| (Nucleolar protein NAP57 homolog) (Nopp-140-associated protein of 57 kDa homolog) (AtNAP57) Length = 565 Score = 237 bits (605), Expect = 9e-63 Identities = 109/128 (85%), Positives = 120/128 (93%) Frame = +3 Query: 69 AKTDGYMIKPQALVPSLDTSTWPLLLKNYDRLNVRTGHYTPLPSGHSPLKRPLAEYLRYG 248 A T YMIKPQ+ P++DTS WP+LLKNYDRLNVRTGHYTP+ +GHSPLKRPL EY+RYG Sbjct: 22 ADTGDYMIKPQSFTPAIDTSQWPILLKNYDRLNVRTGHYTPISAGHSPLKRPLQEYIRYG 81 Query: 249 VINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAG 428 VINLDKP+NPSSHEVVAWIKR+LRVEKTGHSGTLDPKVTGNLIVC+DRATRLVKSQQGAG Sbjct: 82 VINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAG 141 Query: 429 KEYVCIAR 452 KEYVC+AR Sbjct: 142 KEYVCVAR 149
>CBF5_CANAL (O43101) Centromere/microtubule-binding protein CBF5| (Centromere-binding factor 5) (Small nucleolar RNP protein CBF5) (H/ACA snoRNP protein CBF5) Length = 479 Score = 207 bits (527), Expect = 1e-53 Identities = 97/125 (77%), Positives = 111/125 (88%) Frame = +3 Query: 78 DGYMIKPQALVPSLDTSTWPLLLKNYDRLNVRTGHYTPLPSGHSPLKRPLAEYLRYGVIN 257 + Y+IKP+++ PS DTS WPLLLKNYD+L VR+GHYTP+P+G +PL R + Y+ GVIN Sbjct: 5 EDYIIKPESVSPSNDTSQWPLLLKNYDKLLVRSGHYTPIPAGSAPLNRDIKSYVSSGVIN 64 Query: 258 LDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAGKEY 437 LDKPSNPSSHEVVAWIKR+LRVEKTGHSGTLDPKVTG LIVC+DRATRLVKSQQGAGKEY Sbjct: 65 LDKPSNPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQGAGKEY 124 Query: 438 VCIAR 452 VCI R Sbjct: 125 VCIVR 129
>CBF5_KLULA (O13473) Centromere/microtubule-binding protein CBF5| (Centromere-binding factor 5) (Small nucleolar RNP protein CBF5) (H/ACA snoRNP protein CBF5) Length = 474 Score = 206 bits (524), Expect = 2e-53 Identities = 98/126 (77%), Positives = 112/126 (88%) Frame = +3 Query: 75 TDGYMIKPQALVPSLDTSTWPLLLKNYDRLNVRTGHYTPLPSGHSPLKRPLAEYLRYGVI 254 +D ++IKP+++ PS +TS WPLLLK+YD+L VR+GHYTP+P+G SPLKR L Y+ GVI Sbjct: 2 SDEFVIKPESVSPSSNTSEWPLLLKDYDKLLVRSGHYTPIPAGASPLKRDLKSYISSGVI 61 Query: 255 NLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAGKE 434 NLDKPSNPSSHEVVAWIKR+LR EKTGHSGTLDPKVTG LIVCVDRATRLVKSQQGAGKE Sbjct: 62 NLDKPSNPSSHEVVAWIKRILRCEKTGHSGTLDPKVTGCLIVCVDRATRLVKSQQGAGKE 121 Query: 435 YVCIAR 452 YVCI R Sbjct: 122 YVCIVR 127
>CBF5_EMENI (O43100) Centromere/microtubule-binding protein CBF5| (Centromere-binding factor 5) (Small nucleolar RNP protein CBF5) (H/ACA snoRNP protein CBF5) (rRNA pseudouridine synthase) Length = 481 Score = 204 bits (520), Expect = 6e-53 Identities = 96/128 (75%), Positives = 109/128 (85%) Frame = +3 Query: 69 AKTDGYMIKPQALVPSLDTSTWPLLLKNYDRLNVRTGHYTPLPSGHSPLKRPLAEYLRYG 248 AK Y IKP+A +++T WPLLLKNYD+L VRTGH+TP+P+G SPLKR L Y+ G Sbjct: 2 AKEVDYTIKPEATASNINTEDWPLLLKNYDKLMVRTGHFTPIPAGSSPLKRDLKSYINSG 61 Query: 249 VINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAG 428 VINLDKPSNPSSHEVVAW+KR+LR EKTGHSGTLDPKVTG LIVC+DRATRLVKSQQGAG Sbjct: 62 VINLDKPSNPSSHEVVAWMKRILRAEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQGAG 121 Query: 429 KEYVCIAR 452 KEYVC+ R Sbjct: 122 KEYVCVIR 129
>CBF5_YEAST (P33322) H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-)| (Centromere/microtubule-binding protein CBF5) (Centromere-binding factor 5) (Small nucleolar RNP protein CBF5) (H/ACA snoRNP protein CBF5) (p64') Length = 483 Score = 204 bits (519), Expect = 8e-53 Identities = 97/125 (77%), Positives = 109/125 (87%) Frame = +3 Query: 78 DGYMIKPQALVPSLDTSTWPLLLKNYDRLNVRTGHYTPLPSGHSPLKRPLAEYLRYGVIN 257 + ++IKP+A S DTS WPLLLKN+D+L VR+GHYTP+P+G SPLKR L Y+ GVIN Sbjct: 4 EDFVIKPEAAGASTDTSEWPLLLKNFDKLLVRSGHYTPIPAGSSPLKRDLKSYISSGVIN 63 Query: 258 LDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAGKEY 437 LDKPSNPSSHEVVAWIKR+LR EKTGHSGTLDPKVTG LIVC+DRATRLVKSQQGAGKEY Sbjct: 64 LDKPSNPSSHEVVAWIKRILRCEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQGAGKEY 123 Query: 438 VCIAR 452 VCI R Sbjct: 124 VCIVR 128
>CBF5_SCHPO (O14007) H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-)| (Centromere-binding factor 5 homolog) Length = 474 Score = 201 bits (510), Expect = 9e-52 Identities = 94/124 (75%), Positives = 111/124 (89%), Gaps = 1/124 (0%) Frame = +3 Query: 84 YMIKPQALVPS-LDTSTWPLLLKNYDRLNVRTGHYTPLPSGHSPLKRPLAEYLRYGVINL 260 +MIKP+A S +DT+ WPLLLKN+D+L VRTGHYTP+P G++PLKRP+AEY+ GVINL Sbjct: 10 FMIKPEATSASKIDTAEWPLLLKNFDKLLVRTGHYTPIPCGNNPLKRPIAEYVSSGVINL 69 Query: 261 DKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAGKEYV 440 DKP+NPSSHEVVAW+K++LRVEKTGHSGTLDPKVTG LI+C DRATRLVKSQQ AGKEYV Sbjct: 70 DKPANPSSHEVVAWVKKILRVEKTGHSGTLDPKVTGCLIICNDRATRLVKSQQSAGKEYV 129 Query: 441 CIAR 452 C+ R Sbjct: 130 CVLR 133
>CBF5_ASPFU (O43102) Centromere/microtubule-binding protein cbf5| (Centromere-binding factor 5) (Small nucleolar RNP protein cbf5) (H/ACA snoRNP protein cbf5) Length = 487 Score = 200 bits (509), Expect = 1e-51 Identities = 94/123 (76%), Positives = 106/123 (86%) Frame = +3 Query: 84 YMIKPQALVPSLDTSTWPLLLKNYDRLNVRTGHYTPLPSGHSPLKRPLAEYLRYGVINLD 263 Y IKP+A ++ T WPLLLKNYD+L VRTGH+TP+P+G SPLKR L Y+ GVINLD Sbjct: 12 YTIKPEAGASNISTEDWPLLLKNYDKLMVRTGHFTPIPAGCSPLKRDLKSYISSGVINLD 71 Query: 264 KPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAGKEYVC 443 KPSNPSSHEVVAW+KR+LR EKTGHSGTLDPKVTG LIVC+DRATRLVKSQQGAGKEYVC Sbjct: 72 KPSNPSSHEVVAWMKRILRAEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQGAGKEYVC 131 Query: 444 IAR 452 + R Sbjct: 132 VIR 134
>DKC1_MOUSE (Q9ESX5) H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-)| (Dyskerin) (Nucleolar protein family A member 4) (snoRNP protein DKC1) (Nopp140-associated protein of 57 kDa) (Nucleolar protein NAP57) Length = 508 Score = 200 bits (509), Expect = 1e-51 Identities = 94/123 (76%), Positives = 108/123 (87%) Frame = +3 Query: 84 YMIKPQALVPSLDTSTWPLLLKNYDRLNVRTGHYTPLPSGHSPLKRPLAEYLRYGVINLD 263 ++IKP++ V LDTS WPLLLKN+D+LNVRT HYTPLP G +PLKR + +Y+R G INLD Sbjct: 35 FLIKPESKVAQLDTSQWPLLLKNFDKLNVRTAHYTPLPCGSNPLKREIGDYIRTGFINLD 94 Query: 264 KPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAGKEYVC 443 KPSNPSSHEVVAWI+R+LRVEKTGHSGTLDPKVTG LIVC++RATRLVKSQQ AGKEYV Sbjct: 95 KPSNPSSHEVVAWIRRILRVEKTGHSGTLDPKVTGCLIVCIERATRLVKSQQSAGKEYVG 154 Query: 444 IAR 452 I R Sbjct: 155 IVR 157
>DKC1_CHICK (Q5ZJH9) H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-)| (Dyskerin) Length = 516 Score = 200 bits (509), Expect = 1e-51 Identities = 95/126 (75%), Positives = 111/126 (88%) Frame = +3 Query: 75 TDGYMIKPQALVPSLDTSTWPLLLKNYDRLNVRTGHYTPLPSGHSPLKRPLAEYLRYGVI 254 T+ ++IKP++ V LDTS WPLLLKN+D+LNV T HYTPLPSG +PLKR +++Y+R G I Sbjct: 31 TEEFLIKPESRVAQLDTSQWPLLLKNFDKLNVLTTHYTPLPSGANPLKREISDYVRSGFI 90 Query: 255 NLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAGKE 434 NLDKPSNPSSHEVVAWI+R+LRVEKTGHSGTLDPKVTG LIVC++RATRLVKSQQ AGKE Sbjct: 91 NLDKPSNPSSHEVVAWIRRILRVEKTGHSGTLDPKVTGCLIVCIERATRLVKSQQSAGKE 150 Query: 435 YVCIAR 452 YV I R Sbjct: 151 YVGIVR 156
>DKC1_RAT (P40615) H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-)| (Dyskerin) (Nucleolar protein family A member 4) (snoRNP protein DKC1) (Nopp140-associated protein of 57 kDa) (Nucleolar protein NAP57) Length = 508 Score = 199 bits (506), Expect = 3e-51 Identities = 93/125 (74%), Positives = 108/125 (86%) Frame = +3 Query: 78 DGYMIKPQALVPSLDTSTWPLLLKNYDRLNVRTGHYTPLPSGHSPLKRPLAEYLRYGVIN 257 + ++IKP++ LDTS WPLLLKN+DRLNVRT HYTP+P G +PLKR + EY+R G IN Sbjct: 34 EDFLIKPESKAAQLDTSQWPLLLKNFDRLNVRTTHYTPIPCGSNPLKREIGEYVRTGFIN 93 Query: 258 LDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAGKEY 437 LDKPSNPSSHEVVAWI+R+LRVEKTGHSGTLDPKVTG LIVC++RATRLVKSQQ AGKEY Sbjct: 94 LDKPSNPSSHEVVAWIRRILRVEKTGHSGTLDPKVTGCLIVCIERATRLVKSQQSAGKEY 153 Query: 438 VCIAR 452 V + R Sbjct: 154 VGVVR 158
>DKC1_HUMAN (O60832) H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-)| (Dyskerin) (Nucleolar protein family A member 4) (snoRNP protein DKC1) (Nopp140-associated protein of 57 kDa) (Nucleolar protein NAP57) (CBF5 homolog) Length = 513 Score = 196 bits (499), Expect = 2e-50 Identities = 93/123 (75%), Positives = 107/123 (86%) Frame = +3 Query: 84 YMIKPQALVPSLDTSTWPLLLKNYDRLNVRTGHYTPLPSGHSPLKRPLAEYLRYGVINLD 263 ++IKP++ V LDTS WPLLLKN+D+LNVRT HYTPL G +PLKR + +Y+R G INLD Sbjct: 35 FLIKPESKVAKLDTSQWPLLLKNFDKLNVRTTHYTPLACGSNPLKREIGDYIRTGFINLD 94 Query: 264 KPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAGKEYVC 443 KPSNPSSHEVVAWI+R+LRVEKTGHSGTLDPKVTG LIVC++RATRLVKSQQ AGKEYV Sbjct: 95 KPSNPSSHEVVAWIRRILRVEKTGHSGTLDPKVTGCLIVCIERATRLVKSQQSAGKEYVG 154 Query: 444 IAR 452 I R Sbjct: 155 IVR 157
>DKC1_DROME (O44081) H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-)| (Nucleolar protein AT band 60B) (Protein minifly) Length = 508 Score = 193 bits (490), Expect = 2e-49 Identities = 90/125 (72%), Positives = 104/125 (83%) Frame = +3 Query: 72 KTDGYMIKPQALVPSLDTSTWPLLLKNYDRLNVRTGHYTPLPSGHSPLKRPLAEYLRYGV 251 K + IKP + + LDTS WPLLLKN+D+LN+R+ HYTPL G SPL R + EY++ G Sbjct: 30 KQGNFQIKPSSKIAELDTSQWPLLLKNFDKLNIRSNHYTPLAHGSSPLNRDIKEYMKTGF 89 Query: 252 INLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAGK 431 INLDKPSNPSSHEVVAWIK++L+VEKTGHSGTLDPKVTG LIVC+DRATRLVKSQQ AGK Sbjct: 90 INLDKPSNPSSHEVVAWIKKILKVEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQSAGK 149 Query: 432 EYVCI 446 EYV I Sbjct: 150 EYVAI 154
>DKC1_CAEEL (O17919) Putative H/ACA ribonucleoprotein complex subunit 4 (EC| 5.4.99.-) Length = 445 Score = 179 bits (455), Expect = 2e-45 Identities = 84/110 (76%), Positives = 92/110 (83%) Frame = +3 Query: 117 LDTSTWPLLLKNYDRLNVRTGHYTPLPSGHSPLKRPLAEYLRYGVINLDKPSNPSSHEVV 296 LD S WPLLLKNYD+LNVRT HYTP G SPLKR + Y+ G NLDKPSNPSSHEVV Sbjct: 35 LDASQWPLLLKNYDKLNVRTNHYTPHVEGVSPLKRDIKNYISSGFFNLDKPSNPSSHEVV 94 Query: 297 AWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAGKEYVCI 446 +WIKR+LR EKTGHSGTLDPKV+G LIVC+DR TRL KSQQGAGKEY+CI Sbjct: 95 SWIKRILRCEKTGHSGTLDPKVSGCLIVCIDRTTRLAKSQQGAGKEYICI 144
>DKC1_CAEBR (Q60YA8) Putative H/ACA ribonucleoprotein complex subunit 4 (EC| 5.4.99.-) Length = 445 Score = 179 bits (455), Expect = 2e-45 Identities = 84/110 (76%), Positives = 92/110 (83%) Frame = +3 Query: 117 LDTSTWPLLLKNYDRLNVRTGHYTPLPSGHSPLKRPLAEYLRYGVINLDKPSNPSSHEVV 296 LD S WPLLLKNYD+LNVRT HYTP G SPLKR + Y+ G NLDKPSNPSSHEVV Sbjct: 35 LDASQWPLLLKNYDKLNVRTNHYTPHVEGVSPLKRDIKNYISSGFFNLDKPSNPSSHEVV 94 Query: 297 AWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAGKEYVCI 446 +WIKR+LR EKTGHSGTLDPKV+G LIVC+DR TRL KSQQGAGKEY+CI Sbjct: 95 SWIKRILRCEKTGHSGTLDPKVSGCLIVCIDRTTRLAKSQQGAGKEYICI 144
>TRUB_PYRAB (Q9V1A5) Probable tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 334 Score = 108 bits (270), Expect = 6e-24 Identities = 51/82 (62%), Positives = 65/82 (79%) Frame = +3 Query: 201 GHSPLKRPLAEYLRYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIV 380 G P KRP+ +++YGVINLDKP P+SHEVVAWIKR+L +EK GH GTLDPKV+G L V Sbjct: 32 GFPPDKRPIELHIQYGVINLDKPPGPTSHEVVAWIKRILNLEKAGHGGTLDPKVSGVLPV 91 Query: 381 CVDRATRLVKSQQGAGKEYVCI 446 ++RATR+V++ AGKEYV + Sbjct: 92 ALERATRVVQALLPAGKEYVAL 113
>TRUB_ARCFU (O30001) Probable tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 325 Score = 107 bits (267), Expect = 1e-23 Identities = 47/84 (55%), Positives = 64/84 (76%) Frame = +3 Query: 201 GHSPLKRPLAEYLRYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIV 380 G P KRP+ EY+R G++ +DKP PSSHEVV W++R+L V KTGH+GTLDP+VTG L + Sbjct: 19 GCYPTKRPMEEYIRKGLVCIDKPMGPSSHEVVVWVRRILNVSKTGHAGTLDPRVTGVLPI 78 Query: 381 CVDRATRLVKSQQGAGKEYVCIAR 452 ++ AT++VK Q + KEYVC+ R Sbjct: 79 FIENATKMVKFLQESSKEYVCLMR 102
>TRUB_PYRHO (O59357) Probable tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 334 Score = 107 bits (266), Expect = 2e-23 Identities = 49/82 (59%), Positives = 65/82 (79%) Frame = +3 Query: 201 GHSPLKRPLAEYLRYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIV 380 G P +RP+ +++YGVINLDKP P+SHEVVAWIKR+L +EK GH GTLDPKV+G L V Sbjct: 32 GFPPYERPIELHIQYGVINLDKPPGPTSHEVVAWIKRILNLEKAGHGGTLDPKVSGVLPV 91 Query: 381 CVDRATRLVKSQQGAGKEYVCI 446 +++ATR+V++ AGKEYV + Sbjct: 92 ALEKATRVVQALLPAGKEYVAL 113
>TRUB_PYRFU (Q7LWY0) Probable tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 340 Score = 105 bits (262), Expect = 5e-23 Identities = 48/82 (58%), Positives = 65/82 (79%) Frame = +3 Query: 201 GHSPLKRPLAEYLRYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIV 380 G P KRP+ ++++GVINLDKP P+SHEVVAWIK++L +EK GH GTLDPKV+G L V Sbjct: 32 GFPPEKRPIEMHIQFGVINLDKPPGPTSHEVVAWIKKILNLEKAGHGGTLDPKVSGVLPV 91 Query: 381 CVDRATRLVKSQQGAGKEYVCI 446 +++ATR+V++ AGKEYV + Sbjct: 92 ALEKATRVVQALLPAGKEYVAL 113
>TRUB_PYRKO (Q5JJE8) Probable tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 338 Score = 105 bits (261), Expect = 7e-23 Identities = 47/82 (57%), Positives = 64/82 (78%) Frame = +3 Query: 201 GHSPLKRPLAEYLRYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIV 380 G P KRP+ ++++G+INLDKP P+SHEVVAW+KR+L + K GH GTLDPKV+G L V Sbjct: 32 GFPPEKRPIEMHIQFGIINLDKPPGPTSHEVVAWVKRILNLNKAGHGGTLDPKVSGVLPV 91 Query: 381 CVDRATRLVKSQQGAGKEYVCI 446 ++RATR+V++ AGKEYV + Sbjct: 92 ALERATRVVQALLPAGKEYVAL 113
>TRUB_METKA (Q8TZ08) Probable tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 338 Score = 100 bits (250), Expect = 1e-21 Identities = 45/82 (54%), Positives = 62/82 (75%) Frame = +3 Query: 201 GHSPLKRPLAEYLRYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIV 380 G P +RP+ EY+ GVINLDKP+ P+SHEVVAW+K + + K GH GTLDPKVTG L + Sbjct: 30 GCPPEERPIEEYIMKGVINLDKPAGPTSHEVVAWVKEIFGLSKAGHGGTLDPKVTGVLPI 89 Query: 381 CVDRATRLVKSQQGAGKEYVCI 446 +++AT+++++ AGKEYV I Sbjct: 90 ALEKATKIIQTLLPAGKEYVTI 111
>TRUB_METAC (Q8TRR5) Probable tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 338 Score = 100 bits (248), Expect = 2e-21 Identities = 46/91 (50%), Positives = 65/91 (71%) Frame = +3 Query: 171 RTGHYTPLPSGHSPLKRPLAEYLRYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTL 350 ++G +T G +P KRP+ EY+ GV+N+DKPS P+SHEV AW+K +L V GH+G+L Sbjct: 18 KSGAWTNPVYGCAPEKRPILEYIEKGVVNIDKPSGPTSHEVAAWVKAILGVNTAGHAGSL 77 Query: 351 DPKVTGNLIVCVDRATRLVKSQQGAGKEYVC 443 DPKVTG L + +AT+ V + + +GKEYVC Sbjct: 78 DPKVTGLLPTLLGKATKAVPALRLSGKEYVC 108
>TRUB_METTH (O26140) Probable tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 324 Score = 95.9 bits (237), Expect = 4e-20 Identities = 44/84 (52%), Positives = 61/84 (72%) Frame = +3 Query: 201 GHSPLKRPLAEYLRYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIV 380 G P +R + ++ GV+NLDKPS P+SH+V +W++ +L VEK GH GTLDPKVTG L + Sbjct: 22 GCPPAERDIEAHISMGVVNLDKPSGPTSHQVDSWVRDMLHVEKVGHGGTLDPKVTGVLPL 81 Query: 381 CVDRATRLVKSQQGAGKEYVCIAR 452 +DRATR+++ A KEYVC+ R Sbjct: 82 GIDRATRVMQLLLEAPKEYVCLMR 105
>TRUB_METMA (Q8PV20) Probable tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 338 Score = 95.5 bits (236), Expect = 5e-20 Identities = 44/91 (48%), Positives = 62/91 (68%) Frame = +3 Query: 171 RTGHYTPLPSGHSPLKRPLAEYLRYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTL 350 ++G +T G P KRP+ EY+ GV+N+DKP P+SHEV AW+K +L V GH+G+L Sbjct: 18 KSGAWTNPAYGCPPEKRPIHEYIEKGVVNIDKPRGPTSHEVAAWVKAILGVHTAGHAGSL 77 Query: 351 DPKVTGNLIVCVDRATRLVKSQQGAGKEYVC 443 DPKVTG L + +AT V + + +GKEY+C Sbjct: 78 DPKVTGLLPTLLGKATLAVPALRLSGKEYIC 108
>TRUB_NANEQ (P60346) Probable tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 348 Score = 92.4 bits (228), Expect = 5e-19 Identities = 43/82 (52%), Positives = 59/82 (71%) Frame = +3 Query: 201 GHSPLKRPLAEYLRYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIV 380 G P RP+ L+Y VINLDKPS P+SH+VVAW++ ++ V K GH GTLDPKVTG L + Sbjct: 44 GEDPYNRPIERLLKYSVINLDKPSGPTSHQVVAWVRDIVGV-KAGHGGTLDPKVTGVLPI 102 Query: 381 CVDRATRLVKSQQGAGKEYVCI 446 + AT+++++ AGKEYV + Sbjct: 103 AIGEATKVLQTLLIAGKEYVAL 124
>TRUB_METJA (Q57612) Probable tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 336 Score = 90.9 bits (224), Expect = 1e-18 Identities = 39/82 (47%), Positives = 58/82 (70%) Frame = +3 Query: 201 GHSPLKRPLAEYLRYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIV 380 G +P +R + + ++YGV+ +DKP P+SHEV W+K++L ++K GH GTLDPKVTG L V Sbjct: 31 GCNPYERKIEDLIKYGVVVVDKPRGPTSHEVSTWVKKILNLDKAGHGGTLDPKVTGVLPV 90 Query: 381 CVDRATRLVKSQQGAGKEYVCI 446 ++RAT+ + KEYVC+ Sbjct: 91 ALERATKTIPMWHIPPKEYVCL 112
>TRUB_PYRAE (Q8ZYB3) Probable tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 333 Score = 88.6 bits (218), Expect = 7e-18 Identities = 38/84 (45%), Positives = 58/84 (69%) Frame = +3 Query: 201 GHSPLKRPLAEYLRYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIV 380 G P +R EY++Y ++ LDKP PSSHEV AW+K++L VE+ GH+GTLDPKV+G L + Sbjct: 21 GKPPSQRSTEEYIKYSLVILDKPRGPSSHEVAAWVKKILGVERAGHAGTLDPKVSGVLPI 80 Query: 381 CVDRATRLVKSQQGAGKEYVCIAR 452 + T+++ + + K YV +A+ Sbjct: 81 AIAEGTKVLMALSRSDKVYVAVAK 104
>TRUB_METMP (Q6LWM3) Probable tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 333 Score = 82.0 bits (201), Expect = 6e-16 Identities = 38/82 (46%), Positives = 50/82 (60%) Frame = +3 Query: 201 GHSPLKRPLAEYLRYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIV 380 G P R + L G++ +DKPS P+SHEV AW++ +L + K GH GTLDPKVTG L V Sbjct: 16 GSDPYNRDIKTLLNTGLVVIDKPSGPTSHEVAAWVRNMLNLVKAGHGGTLDPKVTGALPV 75 Query: 381 CVDRATRLVKSQQGAGKEYVCI 446 + T+ V KEYVC+ Sbjct: 76 ALGNTTKCVPIWHIPPKEYVCL 97
>TRUB_HALSA (Q9HPA4) Probable tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 301 Score = 81.6 bits (200), Expect = 8e-16 Identities = 41/79 (51%), Positives = 52/79 (65%) Frame = +3 Query: 210 PLKRPLAEYLRYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVD 389 P +R A L +GV+NLDKP PS+H+V AWI+ L+ VEK H+GTLDPKVTG L V Sbjct: 7 PGERSPAAVLSFGVVNLDKPPGPSAHQVSAWIRDLVGVEKAAHAGTLDPKVTGCLPVLTG 66 Query: 390 RATRLVKSQQGAGKEYVCI 446 ATR+ + KEYV + Sbjct: 67 TATRIAPALLEGFKEYVAV 85
>TRUB_HALMA (Q5UXH1) Probable tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 314 Score = 73.6 bits (179), Expect = 2e-13 Identities = 37/86 (43%), Positives = 50/86 (58%) Frame = +3 Query: 189 PLPSGHSPLKRPLAEYLRYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTG 368 P+ P +R L +GV+NLDKP PS+H+V AWI+ ++ H GTLDPKVTG Sbjct: 18 PMTLRAPPDERDLDSLRSFGVVNLDKPPGPSAHQVAAWIRDATGQDRVAHGGTLDPKVTG 77 Query: 369 NLIVCVDRATRLVKSQQGAGKEYVCI 446 L V + A R+ + A KEYV + Sbjct: 78 CLPVLLGDAARMAQVFDNAVKEYVTV 103
>TRUB_SYMTH (Q67P83) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 299 Score = 72.4 bits (176), Expect = 5e-13 Identities = 36/64 (56%), Positives = 46/64 (71%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+NL KP +SH+VVA+++R L V+K GH+GTLDP V G L VCV RATRL + G+ Sbjct: 14 GVLNLLKPPGMTSHDVVAFVRRALGVKKAGHTGTLDPGVAGVLPVCVGRATRLAEYIAGS 73 Query: 426 GKEY 437 K Y Sbjct: 74 DKAY 77
>TRUB_MYCLE (Q9Z5I4) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 320 Score = 71.2 bits (173), Expect = 1e-12 Identities = 33/69 (47%), Positives = 47/69 (68%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ +DKPS +SH+VVA +R+ + GH+GTLDP TG L++ VDRAT+++ GA Sbjct: 13 GIVVIDKPSGMTSHDVVARCRRIFCTRRVGHAGTLDPMATGVLVLGVDRATKILGLLAGA 72 Query: 426 GKEYVCIAR 452 KEYV R Sbjct: 73 SKEYVATIR 81
>TRUB_THEVO (Q97BU9) Probable tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 353 Score = 71.2 bits (173), Expect = 1e-12 Identities = 32/69 (46%), Positives = 45/69 (65%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G I +DKP P+SH+V W++++L EK GH GTLDP VTG L++ + +A RL+ Sbjct: 10 GFIVIDKPQGPTSHQVDYWVRQILGTEKVGHIGTLDPNVTGVLVMAIGKAVRLIDVVHEK 69 Query: 426 GKEYVCIAR 452 KEYV + R Sbjct: 70 PKEYVGVMR 78
>TRUB_THEAC (Q9HIT4) Probable tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 365 Score = 69.7 bits (169), Expect = 3e-12 Identities = 32/69 (46%), Positives = 44/69 (63%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G + LDKP P+SH+V W++ +L +EK H GTLDP VTG L + + +A RLV + Sbjct: 8 GFVVLDKPQGPTSHQVDHWVREILGIEKVAHIGTLDPNVTGVLTMAIGKAVRLVDVVHES 67 Query: 426 GKEYVCIAR 452 KEYV + R Sbjct: 68 PKEYVGVMR 76
>TRUB_GEOKA (Q5L0I5) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 285 Score = 67.0 bits (162), Expect = 2e-11 Identities = 31/64 (48%), Positives = 45/64 (70%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ L+KP +SH+ VA ++RLL V+K GH+GTLDP V+G L +C+ +ATR+ + G Sbjct: 3 GVLLLNKPKGMTSHDCVAKVRRLLGVKKAGHTGTLDPNVSGVLPICLGKATRIAEFLTGT 62 Query: 426 GKEY 437 K Y Sbjct: 63 TKTY 66
>TRUB_SYNP7 (Q8KIY0) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 294 Score = 66.6 bits (161), Expect = 3e-11 Identities = 35/65 (53%), Positives = 45/65 (69%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G +NLDKP+ +SH+ VA ++RLLR + GH GTLDP VTG L + V RATRL+ + Sbjct: 5 GFVNLDKPAGWTSHDCVAKLRRLLRERRIGHGGTLDPAVTGVLPIAVGRATRLL-PYLPS 63 Query: 426 GKEYV 440 GK YV Sbjct: 64 GKTYV 68
>TRUB_SYNP6 (Q5N5A0) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 294 Score = 66.6 bits (161), Expect = 3e-11 Identities = 35/65 (53%), Positives = 45/65 (69%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G +NLDKP+ +SH+ VA ++RLLR + GH GTLDP VTG L + V RATRL+ + Sbjct: 5 GFVNLDKPAGWTSHDCVAKLRRLLRERRIGHGGTLDPAVTGVLPIAVGRATRLL-PYLPS 63 Query: 426 GKEYV 440 GK YV Sbjct: 64 GKTYV 68
>TRUB_CORJK (Q4JV56) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 308 Score = 65.9 bits (159), Expect = 5e-11 Identities = 31/71 (43%), Positives = 45/71 (63%) Frame = +3 Query: 240 RYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQ 419 R GV+ +DKPS P+SH++VA ++R++ + GHSGTLDP TG L+V V+R T+ + Sbjct: 12 RSGVVLVDKPSGPTSHDMVAKLRRIMGTRRIGHSGTLDPMATGLLVVGVERGTKFLAHVV 71 Query: 420 GAGKEYVCIAR 452 K Y R Sbjct: 72 THDKRYEATVR 82
>TRUB_PROAC (Q6A7P0) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 295 Score = 65.5 bits (158), Expect = 6e-11 Identities = 32/72 (44%), Positives = 47/72 (65%) Frame = +3 Query: 237 LRYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQ 416 L+ GV+ +DKP+ +SH+VV ++RL+ K GH+GTLDP +G L+V V+RATRL+ Sbjct: 4 LQSGVLVVDKPAGVTSHQVVGRVRRLMGTRKVGHAGTLDPMASGVLVVGVNRATRLLGHL 63 Query: 417 QGAGKEYVCIAR 452 K+Y R Sbjct: 64 SLHDKDYTATVR 75
>TRUB_LEIXX (Q6AG41) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 302 Score = 64.3 bits (155), Expect = 1e-10 Identities = 31/65 (47%), Positives = 45/65 (69%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ +DKP +SH+VVA ++RL K GH+GTLDP TG L++ ++ +TRL+ GA Sbjct: 7 GLLLIDKPGGWTSHDVVARVRRLAGTRKVGHAGTLDPMATGLLVLGLNSSTRLLTYIVGA 66 Query: 426 GKEYV 440 KEYV Sbjct: 67 EKEYV 71
>TRUB_PICTO (Q6L1A0) Probable tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 349 Score = 63.9 bits (154), Expect = 2e-10 Identities = 28/69 (40%), Positives = 44/69 (63%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G I +DKP P+SH++ +WI+ + + GH GTLDP V+G L++ + +AT+L+ Sbjct: 6 GFIVVDKPKGPTSHQIDSWIRDITGEPRVGHIGTLDPGVSGVLVMALGKATKLIDIVHRE 65 Query: 426 GKEYVCIAR 452 KEYV + R Sbjct: 66 SKEYVSVLR 74
>TRUB_BACSU (P32732) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 309 Score = 63.2 bits (152), Expect = 3e-10 Identities = 30/64 (46%), Positives = 44/64 (68%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ L KP +SH+ V I++LL+ +K GH+GTLDP+V+G L +CV RAT++V+ Sbjct: 4 GVLLLHKPVGMTSHDCVMKIRKLLKTKKVGHTGTLDPEVSGVLPICVGRATKIVEYLTEK 63 Query: 426 GKEY 437 K Y Sbjct: 64 SKTY 67
>TRUB_BACLD (Q65JH8) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 309 Score = 63.2 bits (152), Expect = 3e-10 Identities = 30/64 (46%), Positives = 44/64 (68%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ L KP +SH+ V I++LL+ +K GH+GTLDP+V+G L +CV RAT++V+ Sbjct: 4 GVLLLHKPVGMTSHDCVMKIRKLLKTKKVGHTGTLDPEVSGVLPICVGRATKIVEYLTEK 63 Query: 426 GKEY 437 K Y Sbjct: 64 SKTY 67
>TRUB_LACPL (Q88VL5) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 307 Score = 62.8 bits (151), Expect = 4e-10 Identities = 30/64 (46%), Positives = 42/64 (65%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ L KP +S + VA I+RL + K GHSGTLDP V G L +C+ AT++V+ + Sbjct: 4 GILPLYKPRGMTSFDCVAKIRRLYQTRKVGHSGTLDPNVDGVLPICIGNATKVVQFLVAS 63 Query: 426 GKEY 437 GKEY Sbjct: 64 GKEY 67
>TRUB_CLOTE (Q895J5) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 289 Score = 62.8 bits (151), Expect = 4e-10 Identities = 30/64 (46%), Positives = 43/64 (67%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GVIN+ KP N +S +VV IK++ R++K GH+GTLDP TG L +C+ +T++V Sbjct: 3 GVINVYKPQNITSFDVVRIIKKISRIKKVGHTGTLDPMATGVLPICLGGSTKIVDFIMNE 62 Query: 426 GKEY 437 KEY Sbjct: 63 HKEY 66
>TRUB_STRT2 (Q5M4G2) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 293 Score = 62.4 bits (150), Expect = 5e-10 Identities = 29/64 (45%), Positives = 43/64 (67%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G+INL K + +SH+ V ++++L +K GH GTLDP VTG L + V +ATR+++ A Sbjct: 4 GIINLKKEAGMTSHDAVFKLRKILHEKKIGHGGTLDPDVTGVLPIAVGKATRVIEYMTEA 63 Query: 426 GKEY 437 GK Y Sbjct: 64 GKVY 67
>TRUB_STRT1 (Q5LZV2) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 293 Score = 62.4 bits (150), Expect = 5e-10 Identities = 29/64 (45%), Positives = 43/64 (67%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G+INL K + +SH+ V ++++L +K GH GTLDP VTG L + V +ATR+++ A Sbjct: 4 GIINLKKEAGMTSHDAVFKLRKILHEKKIGHGGTLDPDVTGVLPIAVGKATRVIEYMTEA 63 Query: 426 GKEY 437 GK Y Sbjct: 64 GKVY 67
>TRUB_ANAVT (Q3M356) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 293 Score = 62.4 bits (150), Expect = 5e-10 Identities = 28/55 (50%), Positives = 42/55 (76%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVK 410 G INLDKP +SH+ VA ++++LR+++ GH+GTLDP TG L + V +ATRL++ Sbjct: 3 GFINLDKPFGWTSHDCVARLRKMLRLKRVGHAGTLDPAATGVLPIAVGKATRLLQ 57
>TRUB_MOOTA (Q2RJM2) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 305 Score = 62.0 bits (149), Expect = 7e-10 Identities = 31/64 (48%), Positives = 42/64 (65%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G +N+ KP +SH+VV ++RLL+V++ GH GTLDP G L V V ATRL++ QG Sbjct: 4 GFVNVLKPPGLTSHDVVQNLRRLLKVKRIGHGGTLDPLAAGVLPVAVGTATRLLEYLQGG 63 Query: 426 GKEY 437 K Y Sbjct: 64 DKAY 67
>TRUB_BUCBP (Q89AF6) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 302 Score = 62.0 bits (149), Expect = 7e-10 Identities = 30/69 (43%), Positives = 43/69 (62%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G+I +DKP SSHE + +K +L+++K GH+GTLDP TG L +C RAT+ + Sbjct: 10 GIILIDKPYGLSSHETLQKVKGILKIKKMGHTGTLDPLATGMLPMCCGRATKFSQFLMNF 69 Query: 426 GKEYVCIAR 452 K Y IA+ Sbjct: 70 KKRYRVIAK 78
>TRUB_STRPM (Q48TB3) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 294 Score = 61.6 bits (148), Expect = 9e-10 Identities = 29/64 (45%), Positives = 43/64 (67%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G+INL K + +SH+ V +++LL+ +K GH GTLDP V G L + V +ATR+++ A Sbjct: 4 GIINLKKEAGMTSHDAVFKLRKLLQEKKIGHGGTLDPDVVGVLPIAVGKATRVIEYMTEA 63 Query: 426 GKEY 437 GK Y Sbjct: 64 GKVY 67
>TRUB_STRP8 (P65859) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 294 Score = 61.6 bits (148), Expect = 9e-10 Identities = 29/64 (45%), Positives = 43/64 (67%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G+INL K + +SH+ V +++LL+ +K GH GTLDP V G L + V +ATR+++ A Sbjct: 4 GIINLKKEAGMTSHDAVFKLRKLLQEKKIGHGGTLDPDVVGVLPIAVGKATRVIEYMTEA 63 Query: 426 GKEY 437 GK Y Sbjct: 64 GKVY 67
>TRUB_STRP6 (Q5XBX7) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 294 Score = 61.6 bits (148), Expect = 9e-10 Identities = 29/64 (45%), Positives = 43/64 (67%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G+INL K + +SH+ V +++LL+ +K GH GTLDP V G L + V +ATR+++ A Sbjct: 4 GIINLKKEAGMTSHDAVFKLRKLLQEKKIGHGGTLDPDVVGVLPIAVGKATRVIEYMTEA 63 Query: 426 GKEY 437 GK Y Sbjct: 64 GKVY 67
>TRUB_STRP3 (Q8K7B8) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 294 Score = 61.6 bits (148), Expect = 9e-10 Identities = 29/64 (45%), Positives = 43/64 (67%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G+INL K + +SH+ V +++LL+ +K GH GTLDP V G L + V +ATR+++ A Sbjct: 4 GIINLKKEAGMTSHDAVFKLRKLLQEKKIGHGGTLDPDVVGVLPIAVGKATRVIEYMTEA 63 Query: 426 GKEY 437 GK Y Sbjct: 64 GKVY 67
>TRUB_STRP1 (P65858) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 294 Score = 61.6 bits (148), Expect = 9e-10 Identities = 29/64 (45%), Positives = 43/64 (67%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G+INL K + +SH+ V +++LL+ +K GH GTLDP V G L + V +ATR+++ A Sbjct: 4 GIINLKKEAGMTSHDAVFKLRKLLQEKKIGHGGTLDPDVVGVLPIAVGKATRVIEYMTEA 63 Query: 426 GKEY 437 GK Y Sbjct: 64 GKVY 67
>TRUB_STRR6 (Q8CWR2) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 292 Score = 61.6 bits (148), Expect = 9e-10 Identities = 29/64 (45%), Positives = 42/64 (65%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G+INL K + +SH+ V ++++L +K GH GTLDP V G L + V +ATR+V+ Q Sbjct: 3 GIINLKKEAGMTSHDAVFKLRKILGTKKIGHGGTLDPDVVGVLPIAVGKATRMVEFMQDE 62 Query: 426 GKEY 437 GK Y Sbjct: 63 GKIY 66
>TRUB_STRPN (Q97QJ3) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 292 Score = 61.6 bits (148), Expect = 9e-10 Identities = 29/64 (45%), Positives = 42/64 (65%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G+INL K + +SH+ V ++++L +K GH GTLDP V G L + V +ATR+V+ Q Sbjct: 3 GIINLKKEAGMTSHDAVFKLRKILGTKKIGHGGTLDPDVVGVLPIAVGKATRMVEFMQDE 62 Query: 426 GKEY 437 GK Y Sbjct: 63 GKIY 66
>TRUB_MYCTU (P62190) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) (MTB-TRUB) Length = 298 Score = 61.6 bits (148), Expect = 9e-10 Identities = 26/69 (37%), Positives = 43/69 (62%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ +DKP+ +SH+VV +R+ + GH+GTLDP TG L++ ++RAT+++ A Sbjct: 7 GIVVIDKPAGMTSHDVVGRCRRIFATRRVGHAGTLDPMATGVLVIGIERATKILGLLTAA 66 Query: 426 GKEYVCIAR 452 K Y R Sbjct: 67 PKSYAATIR 75
>TRUB_MYCBO (P62189) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 298 Score = 61.6 bits (148), Expect = 9e-10 Identities = 26/69 (37%), Positives = 43/69 (62%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ +DKP+ +SH+VV +R+ + GH+GTLDP TG L++ ++RAT+++ A Sbjct: 7 GIVVIDKPAGMTSHDVVGRCRRIFATRRVGHAGTLDPMATGVLVIGIERATKILGLLTAA 66 Query: 426 GKEYVCIAR 452 K Y R Sbjct: 67 PKSYAATIR 75
>TRUB_DEIRA (Q9RUQ9) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 308 Score = 61.2 bits (147), Expect = 1e-09 Identities = 29/64 (45%), Positives = 44/64 (68%) Frame = +3 Query: 249 VINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAG 428 VI DKP + +SH+VV +R L ++ GH+GTLDP TG +++CVD +T+LV+ + Sbjct: 3 VIAADKPLHLTSHDVVNRARRALGTKRVGHTGTLDPLATGVVVLCVDDSTKLVQFMEHDT 62 Query: 429 KEYV 440 KEY+ Sbjct: 63 KEYL 66
>TRUB_STRCO (Q9Z528) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 301 Score = 61.2 bits (147), Expect = 1e-09 Identities = 29/65 (44%), Positives = 45/65 (69%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ +DKPS +SH+VVA ++ + R + GH+GTLDP TG L++ V+RAT+L+ Sbjct: 10 GLVIVDKPSGFTSHDVVAKMRGIARTRRVGHAGTLDPMATGVLVLGVERATKLLGHLALT 69 Query: 426 GKEYV 440 KEY+ Sbjct: 70 EKEYL 74
>TRUB_BACSK (Q5WFU5) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 302 Score = 60.8 bits (146), Expect = 1e-09 Identities = 26/65 (40%), Positives = 42/65 (64%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ LDKP +SH+ V +++ + K GH+GTLDP+V G L +C+ +AT++VK Sbjct: 5 GIVVLDKPKGWTSHDCVHQMRKWFQTRKVGHTGTLDPEVDGVLPICIGKATKVVKYMSDY 64 Query: 426 GKEYV 440 K Y+ Sbjct: 65 DKTYI 69
>TRUB_LACLA (Q9CGH0) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 329 Score = 60.8 bits (146), Expect = 1e-09 Identities = 29/64 (45%), Positives = 45/64 (70%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++N+ K + +S +VVA ++ +L+ +K GH GTLDP VTG L V V ++TRL++ + A Sbjct: 7 GILNVYKEAGWTSFDVVAKLRGILKTKKIGHGGTLDPSVTGVLPVAVGKSTRLLEYMEAA 66 Query: 426 GKEY 437 GK Y Sbjct: 67 GKIY 70
>TRUB_SYNY3 (P74696) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 296 Score = 60.5 bits (145), Expect = 2e-09 Identities = 32/70 (45%), Positives = 45/70 (64%) Frame = +3 Query: 243 YGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQG 422 +G +NL KP + +SH+ VA ++RLLR ++ GH GTLDP G L + V ATRL+ G Sbjct: 2 FGFLNLHKPLHLTSHDCVAKVRRLLRQKRVGHGGTLDPLAEGVLPLAVGSATRLLPYLPG 61 Query: 423 AGKEYVCIAR 452 A K+Y + R Sbjct: 62 A-KQYQALIR 70
>TRUB_BACHK (Q6HF05) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 307 Score = 60.5 bits (145), Expect = 2e-09 Identities = 28/64 (43%), Positives = 42/64 (65%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ L KP +SH+ V ++++LR ++ GH+GTLDP VTG L +CV RAT++ + Sbjct: 3 GVVLLHKPKGMTSHDCVFKLRKILREKRIGHTGTLDPDVTGVLPICVGRATKIAQFLTSE 62 Query: 426 GKEY 437 K Y Sbjct: 63 TKTY 66
>TRUB_BACCZ (Q636L6) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 307 Score = 60.5 bits (145), Expect = 2e-09 Identities = 28/64 (43%), Positives = 42/64 (65%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ L KP +SH+ V ++++LR ++ GH+GTLDP VTG L +CV RAT++ + Sbjct: 3 GVVLLHKPKGMTSHDCVFKLRKILREKRIGHTGTLDPDVTGVLPICVGRATKIAQFLTSE 62 Query: 426 GKEY 437 K Y Sbjct: 63 TKTY 66
>TRUB_BACCR (Q812X9) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 307 Score = 60.5 bits (145), Expect = 2e-09 Identities = 28/64 (43%), Positives = 42/64 (65%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ L KP +SH+ V ++++LR ++ GH+GTLDP VTG L +CV RAT++ + Sbjct: 3 GVVLLHKPKGMTSHDCVFKLRKILREKRIGHTGTLDPDVTGVLPICVGRATKIAQFLTSE 62 Query: 426 GKEY 437 K Y Sbjct: 63 TKTY 66
>TRUB_BACAN (P59873) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 307 Score = 60.5 bits (145), Expect = 2e-09 Identities = 28/64 (43%), Positives = 42/64 (65%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ L KP +SH+ V ++++LR ++ GH+GTLDP VTG L +CV RAT++ + Sbjct: 3 GVVLLHKPKGMTSHDCVFKLRKILREKRIGHTGTLDPDVTGVLPICVGRATKIAQFLTSE 62 Query: 426 GKEY 437 K Y Sbjct: 63 TKTY 66
>TRUB_THEFY (Q47RU8) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 293 Score = 60.5 bits (145), Expect = 2e-09 Identities = 28/54 (51%), Positives = 40/54 (74%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLV 407 GV+ +DKP+ +SH+VVA ++RL + GH+GTLDP TG L+V V +ATRL+ Sbjct: 4 GVVIVDKPAGWTSHDVVARVRRLAGTRRVGHAGTLDPMATGVLVVGVGKATRLL 57
>TRUB_PROMT (Q46JB9) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 314 Score = 60.5 bits (145), Expect = 2e-09 Identities = 27/61 (44%), Positives = 42/61 (68%) Frame = +3 Query: 243 YGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQG 422 +G + +DKPS +SH+ V ++++ ++K GHSGTLDP VTG L + + ATRL+ QG Sbjct: 5 FGFVVIDKPSGLTSHDCVNRLRKVFGIKKIGHSGTLDPAVTGVLPIAIGDATRLISYLQG 64 Query: 423 A 425 + Sbjct: 65 S 65
>TRUB_GLOVI (Q7MBB8) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 292 Score = 60.5 bits (145), Expect = 2e-09 Identities = 28/55 (50%), Positives = 39/55 (70%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVK 410 G +NLDKP+ +SH+ +A ++R+L + GH GTLDP TG L V V RATRL++ Sbjct: 3 GFLNLDKPAGLTSHDCIARLRRVLGERRIGHGGTLDPAATGVLPVAVGRATRLLR 57
>TRUB_CARHZ (Q3ABA1) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 288 Score = 60.5 bits (145), Expect = 2e-09 Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 1/66 (1%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQG- 422 G INL KP +SH+VVA++++ L+ K GH GTLDP G L V V +ATRL++ + Sbjct: 3 GFINLLKPPGMTSHDVVAYVRKKLKTGKVGHLGTLDPAAAGVLPVAVGQATRLIEYLENV 62 Query: 423 AGKEYV 440 A KEY+ Sbjct: 63 AMKEYL 68
>TRUB_BACHD (Q9KA80) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 304 Score = 60.1 bits (144), Expect = 3e-09 Identities = 28/64 (43%), Positives = 41/64 (64%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ L KP +SH+ VA ++RLL+ +K GH+GTLDP V G L VC+ AT++ + Sbjct: 5 GILPLAKPRGMTSHDCVAKLRRLLKTKKVGHTGTLDPDVYGVLPVCIGHATKVAQYMSDY 64 Query: 426 GKEY 437 K Y Sbjct: 65 PKAY 68
>TRUB_DESPS (Q6AJY7) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 246 Score = 60.1 bits (144), Expect = 3e-09 Identities = 29/66 (43%), Positives = 44/66 (66%), Gaps = 1/66 (1%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDR-ATRLVKSQQG 422 G+ +DKP +S VV+ ++R+L ++K GH+GTLDP TG L+VC R AT+++ S Sbjct: 9 GIFLIDKPVGITSFGVVSRVRRILGMKKVGHAGTLDPFATGLLVVCAGRPATKMISSFMD 68 Query: 423 AGKEYV 440 KEY+ Sbjct: 69 GEKEYI 74
>TRUB_RALEJ (Q46ZP3) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 315 Score = 60.1 bits (144), Expect = 3e-09 Identities = 31/70 (44%), Positives = 41/70 (58%) Frame = +3 Query: 243 YGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQG 422 +GV+ LDKP SS++ + KRLLR K GH+GTLDP TG L +C AT+ + Sbjct: 18 HGVLLLDKPLGLSSNDALVRAKRLLRALKAGHTGTLDPLATGLLPLCFGEATKFSQDLLD 77 Query: 423 AGKEYVCIAR 452 A K Y + R Sbjct: 78 ADKTYEAVVR 87
>TRUB_HELMO (Q8GB99) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) (Fragment) Length = 307 Score = 60.1 bits (144), Expect = 3e-09 Identities = 31/72 (43%), Positives = 46/72 (63%) Frame = +3 Query: 207 SPLKRPLAEYLRYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCV 386 +PLK PL G +N+ KP +SH+VVA +R+LR ++ GH GTLDP G L + + Sbjct: 2 NPLKSPLE-----GFLNILKPPGMTSHDVVAKARRILREKRIGHMGTLDPDAAGVLPIAL 56 Query: 387 DRATRLVKSQQG 422 +ATRL++ +G Sbjct: 57 GQATRLIELVRG 68
>TRUB_BACC1 (Q732R2) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 307 Score = 60.1 bits (144), Expect = 3e-09 Identities = 27/64 (42%), Positives = 42/64 (65%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ L KP +SH+ + ++++LR ++ GH+GTLDP VTG L +CV RAT++ + Sbjct: 3 GVVLLHKPKGMTSHDCIFKLRKILREKRIGHTGTLDPDVTGVLPICVGRATKIAQFLTSE 62 Query: 426 GKEY 437 K Y Sbjct: 63 TKTY 66
>TRUB_VIBCH (Q9KU78) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 312 Score = 60.1 bits (144), Expect = 3e-09 Identities = 30/70 (42%), Positives = 43/70 (61%) Frame = +3 Query: 243 YGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQG 422 +GVI LDKP+ SS++ + +KRL EK GH+G LDP TG L +C+ AT+ + Sbjct: 11 HGVILLDKPTGISSNDALQKVKRLYGAEKAGHTGALDPLATGMLPICLGEATKFSQFLLD 70 Query: 423 AGKEYVCIAR 452 + K Y IA+ Sbjct: 71 SDKRYRVIAK 80
>TRUB_STRMU (Q8DU15) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 293 Score = 60.1 bits (144), Expect = 3e-09 Identities = 28/64 (43%), Positives = 43/64 (67%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G+INL K + +SH+ V ++++L+ +K GH GTLDP V G L + V +ATR+++ A Sbjct: 4 GIINLKKEAGMTSHDAVFKLRKILKEKKIGHGGTLDPDVIGVLPIAVGKATRVLEYMTEA 63 Query: 426 GKEY 437 GK Y Sbjct: 64 GKVY 67
>TRUB_MYCPA (Q73VW3) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 293 Score = 60.1 bits (144), Expect = 3e-09 Identities = 27/69 (39%), Positives = 43/69 (62%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ +DKP+ +SH+VV +R+ + GH+GTLDP TG L++ V+RAT+++ A Sbjct: 5 GLVVVDKPAGMTSHDVVGRCRRIFATRRVGHAGTLDPMATGVLVLGVERATKILGLLTAA 64 Query: 426 GKEYVCIAR 452 K Y R Sbjct: 65 AKSYSATIR 73
>TRUB_STRAW (Q82K56) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 301 Score = 60.1 bits (144), Expect = 3e-09 Identities = 28/65 (43%), Positives = 45/65 (69%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ +DKPS +SH+VVA ++ + R + GH+GTLDP TG L++ V++AT+L+ Sbjct: 10 GLVIVDKPSGFTSHDVVAKMRGIARTRRVGHAGTLDPMATGVLVLGVEKATKLLGHLALT 69 Query: 426 GKEYV 440 KEY+ Sbjct: 70 EKEYL 74
>TRUB_PELCD (Q3A4A3) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 306 Score = 59.7 bits (143), Expect = 3e-09 Identities = 28/64 (43%), Positives = 41/64 (64%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ +DKP +SH VV I+RL + K GH+GTLDP TG L+V + +ATR+++ Sbjct: 3 GILIVDKPQGMTSHAVVGRIRRLFGLRKVGHAGTLDPLATGVLVVALGQATRILQFLMQE 62 Query: 426 GKEY 437 K Y Sbjct: 63 NKVY 66
>TRUB_XANAC (Q8PJ57) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 308 Score = 59.7 bits (143), Expect = 3e-09 Identities = 29/65 (44%), Positives = 41/65 (63%) Frame = +3 Query: 243 YGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQG 422 +G++ LDKPS SS+ + +RLLR EK GH+G+LDP TG L +C AT++ G Sbjct: 11 HGILLLDKPSGLSSNNALQAARRLLRAEKGGHTGSLDPLATGLLPLCFGEATKIAGLLLG 70 Query: 423 AGKEY 437 + K Y Sbjct: 71 SAKAY 75
>TRUB_CORGL (Q8NP46) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 297 Score = 59.7 bits (143), Expect = 3e-09 Identities = 26/64 (40%), Positives = 41/64 (64%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ +DKP+ +SH+VV+ ++R K GH+GTLDP TG L+V ++R TR + + Sbjct: 9 GLVIVDKPAGMTSHDVVSKLRRAFSTRKVGHAGTLDPMATGVLVVGIERGTRFLAHMVAS 68 Query: 426 GKEY 437 K Y Sbjct: 69 TKAY 72
>TRUB_STRA5 (P65857) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 294 Score = 59.7 bits (143), Expect = 3e-09 Identities = 27/64 (42%), Positives = 42/64 (65%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G+INL K + +SH+ V ++++L +K GH GTLDP V G L + V +ATR+++ + Sbjct: 4 GIINLKKEAGMTSHDAVFKLRKILHTKKIGHGGTLDPDVVGVLPIAVGKATRVIEYMTES 63 Query: 426 GKEY 437 GK Y Sbjct: 64 GKIY 67
>TRUB_STRA3 (P65856) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 294 Score = 59.7 bits (143), Expect = 3e-09 Identities = 27/64 (42%), Positives = 42/64 (65%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G+INL K + +SH+ V ++++L +K GH GTLDP V G L + V +ATR+++ + Sbjct: 4 GIINLKKEAGMTSHDAVFKLRKILHTKKIGHGGTLDPDVVGVLPIAVGKATRVIEYMTES 63 Query: 426 GKEY 437 GK Y Sbjct: 64 GKIY 67
>TRUB_STRA1 (Q3K189) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 294 Score = 59.7 bits (143), Expect = 3e-09 Identities = 27/64 (42%), Positives = 42/64 (65%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G+INL K + +SH+ V ++++L +K GH GTLDP V G L + V +ATR+++ + Sbjct: 4 GIINLKKEAGMTSHDAVFKLRKILHTKKIGHGGTLDPDVVGVLPIAVGKATRVIEYMTES 63 Query: 426 GKEY 437 GK Y Sbjct: 64 GKIY 67
>TRUB_MANSM (Q65SL2) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 305 Score = 59.7 bits (143), Expect = 3e-09 Identities = 28/70 (40%), Positives = 42/70 (60%) Frame = +3 Query: 243 YGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQG 422 +GV LDKP SS++++ +KR+ + K GH+G LDP TG L +C+ AT+ + Sbjct: 12 HGVFLLDKPQGMSSNDILQKVKRIYQANKAGHTGALDPLATGMLPICLGEATKFSQFLLD 71 Query: 423 AGKEYVCIAR 452 A K Y IA+ Sbjct: 72 ADKRYQVIAK 81
>TRUB_PHOLL (Q7MAY1) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 315 Score = 59.3 bits (142), Expect = 4e-09 Identities = 29/70 (41%), Positives = 42/70 (60%) Frame = +3 Query: 243 YGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQG 422 +GV+ LDKP + SS++ + +KR+ K GH+G LDP TG L VC+ AT+ + Sbjct: 11 HGVLLLDKPQDISSNDALQKVKRIFNASKAGHTGALDPLATGMLPVCLGEATKFSQFLLD 70 Query: 423 AGKEYVCIAR 452 + K Y IAR Sbjct: 71 SDKRYRVIAR 80
>TRUB_HAEIN (P45142) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 312 Score = 59.3 bits (142), Expect = 4e-09 Identities = 28/69 (40%), Positives = 41/69 (59%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV LDKP SS++++ +KRL + K GH+G LDP TG L +C+ AT+ + A Sbjct: 13 GVFLLDKPQGMSSNDIMQKVKRLFQANKAGHTGALDPLATGMLPICLGEATKFSQFLLDA 72 Query: 426 GKEYVCIAR 452 K Y+ A+ Sbjct: 73 DKRYLVTAK 81
>TRUB_HAEI8 (Q4QK43) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 306 Score = 59.3 bits (142), Expect = 4e-09 Identities = 28/69 (40%), Positives = 41/69 (59%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV LDKP SS++++ +KRL + K GH+G LDP TG L +C+ AT+ + A Sbjct: 13 GVFLLDKPQGMSSNDIMQKVKRLFQANKAGHTGALDPLATGMLPICLGEATKFSQFLLDA 72 Query: 426 GKEYVCIAR 452 K Y+ A+ Sbjct: 73 DKRYLVTAK 81
>TRUB_FUSNN (Q8R5X8) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 287 Score = 59.3 bits (142), Expect = 4e-09 Identities = 25/65 (38%), Positives = 42/65 (64%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G+I ++KP +S +V+ +K+ L+ +K GH+GTLDP G ++VCV +AT+L + Sbjct: 3 GIIVINKPKGITSFDVIRKLKKFLKTKKIGHTGTLDPLAIGVMLVCVGKATKLASDLEAK 62 Query: 426 GKEYV 440 K Y+ Sbjct: 63 DKVYI 67
>TRUB_LISMO (Q8Y7F3) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 304 Score = 59.3 bits (142), Expect = 4e-09 Identities = 28/65 (43%), Positives = 42/65 (64%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G+I L K +SH+ V ++++L +K GH+GTLDP+V G L +C+ RAT+L + Sbjct: 3 GIIPLWKERGMTSHDCVYKLRKILHTKKVGHTGTLDPEVEGVLPICIGRATKLAEYVTDE 62 Query: 426 GKEYV 440 GK YV Sbjct: 63 GKVYV 67
>TRUB_LISMF (Q71ZZ4) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 304 Score = 59.3 bits (142), Expect = 4e-09 Identities = 28/65 (43%), Positives = 42/65 (64%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G+I L K +SH+ V ++++L +K GH+GTLDP+V G L +C+ RAT+L + Sbjct: 3 GIIPLWKERGMTSHDCVFKLRKILHTKKVGHTGTLDPEVEGVLPICIGRATKLAEYVTDE 62 Query: 426 GKEYV 440 GK YV Sbjct: 63 GKVYV 67
>TRUB_LISIN (Q92C26) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 304 Score = 59.3 bits (142), Expect = 4e-09 Identities = 28/65 (43%), Positives = 42/65 (64%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G+I L K +SH+ V ++++L +K GH+GTLDP+V G L +C+ RAT+L + Sbjct: 3 GIIPLWKERGMTSHDCVFKLRKILHTKKVGHTGTLDPEVEGVLPICIGRATKLAEYVTDE 62 Query: 426 GKEYV 440 GK YV Sbjct: 63 GKVYV 67
>TRUB_HAEDU (P59878) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 305 Score = 59.3 bits (142), Expect = 4e-09 Identities = 28/70 (40%), Positives = 41/70 (58%) Frame = +3 Query: 243 YGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQG 422 +GV LDKP SS+EV+ +KR + K GH+G LDP TG L +C+ AT+ + Sbjct: 12 HGVFLLDKPQGMSSNEVLQKVKRFYQANKAGHTGALDPLATGMLPICLGEATKFSQFLLD 71 Query: 423 AGKEYVCIAR 452 + K Y+ A+ Sbjct: 72 SDKRYIVTAK 81
>TRUB_VIBVY (Q7MI11) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 314 Score = 59.3 bits (142), Expect = 4e-09 Identities = 30/69 (43%), Positives = 42/69 (60%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GVI LDKP+ SS++ + +KRL EK GH+G LDP TG L +C+ AT+ + + Sbjct: 12 GVILLDKPTGMSSNDALQKVKRLYFAEKAGHTGALDPLATGMLPICLGEATKFSQFLLDS 71 Query: 426 GKEYVCIAR 452 K Y IA+ Sbjct: 72 DKRYRVIAK 80
>TRUB_VIBVU (Q8DBV8) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 314 Score = 59.3 bits (142), Expect = 4e-09 Identities = 30/69 (43%), Positives = 42/69 (60%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GVI LDKP+ SS++ + +KRL EK GH+G LDP TG L +C+ AT+ + + Sbjct: 12 GVILLDKPTGMSSNDALQKVKRLYFAEKAGHTGALDPLATGMLPICLGEATKFSQFLLDS 71 Query: 426 GKEYVCIAR 452 K Y IA+ Sbjct: 72 DKRYRVIAK 80
>TRUB_ERWCT (Q6D9A3) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 314 Score = 59.3 bits (142), Expect = 4e-09 Identities = 28/70 (40%), Positives = 42/70 (60%) Frame = +3 Query: 243 YGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQG 422 +GV+ LDKP SS++V+ +KR+ + GH+G LDP TG L +C+ AT+ + Sbjct: 12 HGVLLLDKPQGVSSNDVLQKVKRIFNANRAGHTGALDPLATGMLPICLGEATKFSQYLLD 71 Query: 423 AGKEYVCIAR 452 + K Y IAR Sbjct: 72 SDKRYRVIAR 81
>TRUB_FRATT (Q5NER4) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 302 Score = 58.9 bits (141), Expect = 6e-09 Identities = 28/69 (40%), Positives = 43/69 (62%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ ++K + SS++V+ +K L +K GH+GTLDP TG L +C RAT++ + A Sbjct: 10 GVVVINKVKDISSNKVLQQLKYLFNAQKAGHTGTLDPMATGVLPICFGRATKIAQYLLDA 69 Query: 426 GKEYVCIAR 452 KEY+ R Sbjct: 70 DKEYIATIR 78
>TRUB_EHRRW (Q5HBH8) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 296 Score = 58.9 bits (141), Expect = 6e-09 Identities = 28/66 (42%), Positives = 42/66 (63%) Frame = +3 Query: 243 YGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQG 422 YG IN+DKP SS VV+ +K++L V+K G++GTLDP +G L + + AT+L+ Sbjct: 2 YGWINIDKPCGISSASVVSRVKKILNVKKVGYAGTLDPLASGILPIAIGEATKLMPYAVD 61 Query: 423 AGKEYV 440 K Y+ Sbjct: 62 VQKSYI 67
>TRUB_EHRRG (Q5FHK7) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 296 Score = 58.9 bits (141), Expect = 6e-09 Identities = 28/66 (42%), Positives = 42/66 (63%) Frame = +3 Query: 243 YGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQG 422 YG IN+DKP SS VV+ +K++L V+K G++GTLDP +G L + + AT+L+ Sbjct: 2 YGWINIDKPCGISSASVVSRVKKILNVKKVGYAGTLDPLASGILPIAIGEATKLMPYAVD 61 Query: 423 AGKEYV 440 K Y+ Sbjct: 62 VQKSYI 67
>TRUB_SALTY (Q8ZLT2) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 314 Score = 58.9 bits (141), Expect = 6e-09 Identities = 28/70 (40%), Positives = 42/70 (60%) Frame = +3 Query: 243 YGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQG 422 +GV+ LDKP SS++V+ +KR+ + GH+G LDP TG L +C+ AT+ + Sbjct: 12 HGVLLLDKPQGMSSNDVLQKVKRIYNANRAGHTGALDPLATGMLPICLGEATKFSQYLLD 71 Query: 423 AGKEYVCIAR 452 + K Y IAR Sbjct: 72 SDKRYRVIAR 81
>TRUB_SALTI (Q8Z3H9) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 314 Score = 58.9 bits (141), Expect = 6e-09 Identities = 28/70 (40%), Positives = 42/70 (60%) Frame = +3 Query: 243 YGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQG 422 +GV+ LDKP SS++V+ +KR+ + GH+G LDP TG L +C+ AT+ + Sbjct: 12 HGVLLLDKPQGMSSNDVLQKVKRIYNANRAGHTGALDPLATGMLPICLGEATKFSQYLLD 71 Query: 423 AGKEYVCIAR 452 + K Y IAR Sbjct: 72 SDKRYRVIAR 81
>TRUB_SALPA (Q5PLB2) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 314 Score = 58.9 bits (141), Expect = 6e-09 Identities = 28/70 (40%), Positives = 42/70 (60%) Frame = +3 Query: 243 YGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQG 422 +GV+ LDKP SS++V+ +KR+ + GH+G LDP TG L +C+ AT+ + Sbjct: 12 HGVLLLDKPQGMSSNDVLQKVKRIYNANRAGHTGALDPLATGMLPICLGEATKFSQYLLD 71 Query: 423 AGKEYVCIAR 452 + K Y IAR Sbjct: 72 SDKRYRVIAR 81
>TRUB_SALCH (Q57JI1) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 314 Score = 58.9 bits (141), Expect = 6e-09 Identities = 28/70 (40%), Positives = 42/70 (60%) Frame = +3 Query: 243 YGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQG 422 +GV+ LDKP SS++V+ +KR+ + GH+G LDP TG L +C+ AT+ + Sbjct: 12 HGVLLLDKPQGMSSNDVLQKVKRIYNANRAGHTGALDPLATGMLPICLGEATKFSQYLLD 71 Query: 423 AGKEYVCIAR 452 + K Y IAR Sbjct: 72 SDKRYRVIAR 81
>TRUB_CORDI (P60343) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 300 Score = 58.9 bits (141), Expect = 6e-09 Identities = 26/69 (37%), Positives = 42/69 (60%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ +DKP +SH+VV+ I+R +K GH+GTLDP TG L++ ++R T+ + + Sbjct: 9 GLVIVDKPQGMTSHDVVSKIRRTFSTKKVGHAGTLDPMATGVLVLGLERGTKFLAHMVAS 68 Query: 426 GKEYVCIAR 452 K Y R Sbjct: 69 TKSYTATIR 77
>TRUB_NITMU (Q2Y7W4) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 313 Score = 58.5 bits (140), Expect = 7e-09 Identities = 29/69 (42%), Positives = 39/69 (56%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ LDK S SS++ + KR+ K GH+GTLDP TG L +C AT+ + GA Sbjct: 11 GVLLLDKASGLSSNQALQTAKRIFSAHKAGHTGTLDPMATGLLPICFGEATKFSSALLGA 70 Query: 426 GKEYVCIAR 452 K Y + R Sbjct: 71 DKTYEAVLR 79
>TRUB_XANOR (Q5GXV1) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 308 Score = 58.5 bits (140), Expect = 7e-09 Identities = 28/65 (43%), Positives = 41/65 (63%) Frame = +3 Query: 243 YGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQG 422 +G++ LDKP+ SS+ + +RLLR EK GH+G+LDP TG L +C AT++ G Sbjct: 11 HGILLLDKPAGLSSNNALQAARRLLRAEKGGHTGSLDPLATGLLPLCFGEATKIAGLLLG 70 Query: 423 AGKEY 437 + K Y Sbjct: 71 SAKAY 75
>TRUB_XANOM (Q2P0X3) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 308 Score = 58.5 bits (140), Expect = 7e-09 Identities = 28/65 (43%), Positives = 41/65 (63%) Frame = +3 Query: 243 YGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQG 422 +G++ LDKP+ SS+ + +RLLR EK GH+G+LDP TG L +C AT++ G Sbjct: 11 HGILLLDKPAGLSSNNALQAARRLLRAEKGGHTGSLDPLATGLLPLCFGEATKIAGLLLG 70 Query: 423 AGKEY 437 + K Y Sbjct: 71 SAKAY 75
>TRUB_XANCP (Q8P7U9) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 308 Score = 58.5 bits (140), Expect = 7e-09 Identities = 28/65 (43%), Positives = 41/65 (63%) Frame = +3 Query: 243 YGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQG 422 +G++ LDKP+ SS+ + +RLLR EK GH+G+LDP TG L +C AT++ G Sbjct: 11 HGILLLDKPAGLSSNNALQAARRLLRAEKGGHTGSLDPLATGLLPLCFGEATKIAGLLLG 70 Query: 423 AGKEY 437 + K Y Sbjct: 71 SAKAY 75
>TRUB_XANC8 (Q4UWA0) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 308 Score = 58.5 bits (140), Expect = 7e-09 Identities = 28/65 (43%), Positives = 41/65 (63%) Frame = +3 Query: 243 YGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQG 422 +G++ LDKP+ SS+ + +RLLR EK GH+G+LDP TG L +C AT++ G Sbjct: 11 HGILLLDKPAGLSSNNALQAARRLLRAEKGGHTGSLDPLATGLLPLCFGEATKIAGLLLG 70 Query: 423 AGKEY 437 + K Y Sbjct: 71 SAKAY 75
>TRUB_XANC5 (Q3BRP7) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 308 Score = 58.5 bits (140), Expect = 7e-09 Identities = 28/65 (43%), Positives = 41/65 (63%) Frame = +3 Query: 243 YGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQG 422 +G++ LDKP+ SS+ + +RLLR EK GH+G+LDP TG L +C AT++ G Sbjct: 11 HGILLLDKPAGLSSNNALQAARRLLRAEKGGHTGSLDPLATGLLPLCFGEATKIAGLLLG 70 Query: 423 AGKEY 437 + K Y Sbjct: 71 SAKAY 75
>TRUB_COREF (Q8FPB3) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 297 Score = 58.5 bits (140), Expect = 7e-09 Identities = 26/64 (40%), Positives = 40/64 (62%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ +DKP+ +SH+VV+ ++R K GH+GTLDP TG L+V ++R TR + Sbjct: 9 GLVVVDKPAGMTSHDVVSKLRRAFSTRKVGHAGTLDPMATGVLVVGIERGTRFLAHLVAT 68 Query: 426 GKEY 437 K Y Sbjct: 69 TKAY 72
>TRUB_THETN (Q8RA40) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 285 Score = 58.5 bits (140), Expect = 7e-09 Identities = 27/64 (42%), Positives = 40/64 (62%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+N+ KP +SH+VV +I+++ ++K GH+GTLDP G L VC+ RAT+ Sbjct: 5 GVLNVLKPPGMTSHDVVDFIRKIYGIKKVGHTGTLDPDAAGVLPVCMGRATKFTSYLMEH 64 Query: 426 GKEY 437 K Y Sbjct: 65 DKRY 68
>TRUB_VIBPA (Q87M04) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 314 Score = 58.2 bits (139), Expect = 1e-08 Identities = 29/69 (42%), Positives = 42/69 (60%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GVI LDKP+ SS++ + +KR+ EK GH+G LDP TG L +C+ AT+ + + Sbjct: 12 GVILLDKPTGISSNDALQKVKRIYFAEKAGHTGALDPLATGMLPICLGEATKFSQFLLDS 71 Query: 426 GKEYVCIAR 452 K Y IA+ Sbjct: 72 DKRYRVIAK 80
>TRUB_GEOMG (Q39VA3) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 304 Score = 57.4 bits (137), Expect = 2e-08 Identities = 27/64 (42%), Positives = 41/64 (64%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G I +DKP+ +SH+++A ++R+L +K GH+GTLDP TG L V + T+ + A Sbjct: 3 GFIVIDKPAGLTSHDIIARVRRILGQKKAGHTGTLDPFATGVLPVAMGEGTKAIPFLDEA 62 Query: 426 GKEY 437 KEY Sbjct: 63 VKEY 66
>TRUB_ANASP (Q8YWR1) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 293 Score = 57.4 bits (137), Expect = 2e-08 Identities = 26/55 (47%), Positives = 41/55 (74%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVK 410 G INL+K +SH+ VA ++++LR+++ GH+GTLDP TG L + V +ATRL++ Sbjct: 3 GFINLNKQFGWTSHDCVARLRKMLRLKRVGHAGTLDPAATGVLPIAVGKATRLLQ 57
>TRUB_YEREN (O34273) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 309 Score = 57.4 bits (137), Expect = 2e-08 Identities = 28/69 (40%), Positives = 41/69 (59%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ LDKP SS++V+ +KRL + GH+G LDP TG L +C+ AT+ + + Sbjct: 13 GVLLLDKPLGLSSNDVLQKVKRLFSANRAGHTGALDPLATGMLPICLGEATKFSQFLLDS 72 Query: 426 GKEYVCIAR 452 K Y +AR Sbjct: 73 DKRYRVVAR 81
>TRUB_RALSO (Q8XZV4) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 314 Score = 57.4 bits (137), Expect = 2e-08 Identities = 30/70 (42%), Positives = 41/70 (58%) Frame = +3 Query: 243 YGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQG 422 +GV+ LDKP SS++ + KRLL +K GH+GTLDP TG L +C AT+ + Sbjct: 18 HGVLLLDKPIGWSSNDALIRAKRLLWAKKAGHTGTLDPLATGLLPLCFGEATKFSQDLLE 77 Query: 423 AGKEYVCIAR 452 A K Y + R Sbjct: 78 ADKTYEAVVR 87
>TRUB_YERPS (Q66F58) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 324 Score = 57.4 bits (137), Expect = 2e-08 Identities = 28/69 (40%), Positives = 41/69 (59%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ LDKP SS++V+ +KRL + GH+G LDP TG L +C+ AT+ + + Sbjct: 13 GVLLLDKPLGLSSNDVLQKVKRLFSANRAGHTGALDPLATGMLPICLGEATKFSQFLLDS 72 Query: 426 GKEYVCIAR 452 K Y +AR Sbjct: 73 DKRYRVVAR 81
>TRUB_YERPE (Q8ZBC4) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 324 Score = 57.4 bits (137), Expect = 2e-08 Identities = 28/69 (40%), Positives = 41/69 (59%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ LDKP SS++V+ +KRL + GH+G LDP TG L +C+ AT+ + + Sbjct: 13 GVLLLDKPLGLSSNDVLQKVKRLFSANRAGHTGALDPLATGMLPICLGEATKFSQFLLDS 72 Query: 426 GKEYVCIAR 452 K Y +AR Sbjct: 73 DKRYRVVAR 81
>TRUB_PASMU (Q9CMQ7) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 307 Score = 57.0 bits (136), Expect = 2e-08 Identities = 27/69 (39%), Positives = 40/69 (57%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV LDKP SS++++ +KR+ + K GH+G LDP TG L +C+ AT+ + A Sbjct: 13 GVFLLDKPQGMSSNDIMQKVKRVFQANKAGHTGALDPLATGMLPICLGEATKFSQFLLDA 72 Query: 426 GKEYVCIAR 452 K Y A+ Sbjct: 73 DKRYQVTAK 81
>TRUB_EHRCJ (Q3YSC6) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 301 Score = 57.0 bits (136), Expect = 2e-08 Identities = 28/66 (42%), Positives = 40/66 (60%) Frame = +3 Query: 243 YGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQG 422 YG +NLDKP SS V +KR+L V+K GH+GTLDP +G L + + AT+++ Sbjct: 2 YGWVNLDKPCGMSSALAVNLVKRILNVKKAGHAGTLDPLASGVLPIAIGEATKVMPYAVD 61 Query: 423 AGKEYV 440 K Y+ Sbjct: 62 VIKSYL 67
>TRUB_THEMA (Q9WZW0) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 309 Score = 57.0 bits (136), Expect = 2e-08 Identities = 25/67 (37%), Positives = 43/67 (64%) Frame = +3 Query: 237 LRYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQ 416 +++G++ KP P+SH+VV +++ L+ K GH GTLDP G LI+ V++ TR+++ Sbjct: 1 MKHGILVAYKPKGPTSHDVVDEVRKKLKTRKVGHGGTLDPFACGVLIIGVNQGTRILEFY 60 Query: 417 QGAGKEY 437 + K Y Sbjct: 61 KDLKKVY 67
>TRUB_LACSS (Q38W87) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 305 Score = 57.0 bits (136), Expect = 2e-08 Identities = 27/64 (42%), Positives = 42/64 (65%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G+I L K +S++ V ++R+L ++K GHSGTLDP V G L +C+ +AT++V + Sbjct: 3 GIIPLYKERGMTSNDCVFKVRRILHMKKVGHSGTLDPNVDGVLPICIGQATKVVDQLVHS 62 Query: 426 GKEY 437 GK Y Sbjct: 63 GKVY 66
>TRUB_LACAC (Q5FJN8) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 297 Score = 57.0 bits (136), Expect = 2e-08 Identities = 26/64 (40%), Positives = 42/64 (65%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G+I +DK +S +VV ++R L + K GH+GTLDP+VTG L + + +AT+L++ Sbjct: 4 GIIVIDKDKGMTSADVVYHLRRALHIRKIGHAGTLDPEVTGVLPIAIGQATKLIELMHTR 63 Query: 426 GKEY 437 K+Y Sbjct: 64 PKKY 67
>TRUB_PROMM (P59881) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 320 Score = 56.6 bits (135), Expect = 3e-08 Identities = 25/61 (40%), Positives = 41/61 (67%) Frame = +3 Query: 243 YGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQG 422 +G + +DKP+ +SH+ V+ ++R+ +++ GH GTLDP VTG L + + ATRL+ G Sbjct: 5 FGFVVIDKPAGITSHDCVSRMRRVFGIKRVGHGGTLDPAVTGVLPIALGHATRLLPYLPG 64 Query: 423 A 425 A Sbjct: 65 A 65
>TRUB_NEIMA (Q9JTX5) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 306 Score = 56.6 bits (135), Expect = 3e-08 Identities = 32/78 (41%), Positives = 41/78 (52%) Frame = +3 Query: 204 HSPLKRPLAEYLRYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVC 383 + P KRP+ GV+ LDKP SS+ + + L R EK GH+G LDP TG L VC Sbjct: 3 NKPAKRPVN-----GVLLLDKPEGLSSNTALQKTRHLFRAEKAGHTGVLDPLATGLLPVC 57 Query: 384 VDRATRLVKSQQGAGKEY 437 AT+ + A K Y Sbjct: 58 FGEATKFAQYLINADKAY 75
>TRUB_CLOPE (Q8XJS1) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 294 Score = 56.6 bits (135), Expect = 3e-08 Identities = 24/54 (44%), Positives = 41/54 (75%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLV 407 GVIN+ K + +S +VVA ++R+ +++K GH+GTLDP +G L VC+ +AT+++ Sbjct: 3 GVINIYKNTGMTSFDVVAMVRRVAKMKKVGHTGTLDPAASGVLPVCLGKATKII 56
>TRUB_BIFLO (Q8CY45) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 387 Score = 56.6 bits (135), Expect = 3e-08 Identities = 26/69 (37%), Positives = 40/69 (57%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ +DKP +S + VA ++ L ++K GH+GTLDP TG L++ ATRL+ + Sbjct: 8 GLLIIDKPQGVTSFDAVAAVRGALHIKKVGHAGTLDPMATGTLVIAFGHATRLLNAIVAH 67 Query: 426 GKEYVCIAR 452 K Y R Sbjct: 68 DKTYEATIR 76
>TRUB_COXBU (Q4AAX7) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 309 Score = 56.6 bits (135), Expect = 3e-08 Identities = 27/64 (42%), Positives = 39/64 (60%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ LDKP +S+E + +KRL +K GH+G+LDP TG L +C+ AT+ + A Sbjct: 16 GVLLLDKPGGMTSNEALQRVKRLFHAKKAGHTGSLDPLATGLLPICLGEATKFSQFLLEA 75 Query: 426 GKEY 437 K Y Sbjct: 76 DKSY 79
>TRUB_STAHJ (Q4L5X4) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 305 Score = 56.6 bits (135), Expect = 3e-08 Identities = 26/64 (40%), Positives = 42/64 (65%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ + K +SH+VV ++++L+ +K GH+GTLDP+V+G L VC+ ATR+ Sbjct: 4 GILPVYKERGLTSHDVVFKLRKILKTKKIGHTGTLDPEVSGVLPVCIGTATRVSDYVMDM 63 Query: 426 GKEY 437 GK Y Sbjct: 64 GKSY 67
>TRUB_SHISS (Q3YX75) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 314 Score = 56.6 bits (135), Expect = 3e-08 Identities = 27/69 (39%), Positives = 40/69 (57%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ LDKP SS++ + +KR+ + GH+G LDP TG L +C+ AT+ + + Sbjct: 13 GVLLLDKPQGMSSNDALQKVKRIYNANRAGHTGALDPLATGMLPICLGEATKFSQYLLDS 72 Query: 426 GKEYVCIAR 452 K Y IAR Sbjct: 73 DKRYRVIAR 81
>TRUB_SHIFL (Q83MJ8) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 314 Score = 56.6 bits (135), Expect = 3e-08 Identities = 27/69 (39%), Positives = 40/69 (57%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ LDKP SS++ + +KR+ + GH+G LDP TG L +C+ AT+ + + Sbjct: 13 GVLLLDKPQGMSSNDALQKVKRIYNANRAGHTGALDPLATGMLPICLGEATKFSQYLLDS 72 Query: 426 GKEYVCIAR 452 K Y IAR Sbjct: 73 DKRYRVIAR 81
>TRUB_ECOLI (P60340) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) (Protein p35) Length = 314 Score = 56.6 bits (135), Expect = 3e-08 Identities = 27/69 (39%), Positives = 40/69 (57%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ LDKP SS++ + +KR+ + GH+G LDP TG L +C+ AT+ + + Sbjct: 13 GVLLLDKPQGMSSNDALQKVKRIYNANRAGHTGALDPLATGMLPICLGEATKFSQYLLDS 72 Query: 426 GKEYVCIAR 452 K Y IAR Sbjct: 73 DKRYRVIAR 81
>TRUB_ECOL6 (P60341) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 314 Score = 56.6 bits (135), Expect = 3e-08 Identities = 27/69 (39%), Positives = 40/69 (57%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ LDKP SS++ + +KR+ + GH+G LDP TG L +C+ AT+ + + Sbjct: 13 GVLLLDKPQGMSSNDALQKVKRIYNANRAGHTGALDPLATGMLPICLGEATKFSQYLLDS 72 Query: 426 GKEYVCIAR 452 K Y IAR Sbjct: 73 DKRYRVIAR 81
>TRUB_ECO57 (P60342) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 314 Score = 56.6 bits (135), Expect = 3e-08 Identities = 27/69 (39%), Positives = 40/69 (57%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ LDKP SS++ + +KR+ + GH+G LDP TG L +C+ AT+ + + Sbjct: 13 GVLLLDKPQGMSSNDALQKVKRIYNANRAGHTGALDPLATGMLPICLGEATKFSQYLLDS 72 Query: 426 GKEYVCIAR 452 K Y IAR Sbjct: 73 DKRYRVIAR 81
>TRUB_THET8 (Q5SLS6) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 312 Score = 56.2 bits (134), Expect = 4e-08 Identities = 26/61 (42%), Positives = 39/61 (63%) Frame = +3 Query: 258 LDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAGKEY 437 +DKP + +SH+VV +R L + GH+GTLDP TG L++ + +T+LV G KEY Sbjct: 6 VDKPLHLTSHDVVEEARRRLSTRRVGHTGTLDPLATGLLLLVTNESTKLVPFLSGEDKEY 65 Query: 438 V 440 + Sbjct: 66 I 66
>TRUB_THET2 (Q72GS9) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 312 Score = 56.2 bits (134), Expect = 4e-08 Identities = 26/61 (42%), Positives = 39/61 (63%) Frame = +3 Query: 258 LDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAGKEY 437 +DKP + +SH+VV +R L + GH+GTLDP TG L++ + +T+LV G KEY Sbjct: 6 VDKPLHLTSHDVVEEARRRLSTRRVGHTGTLDPLATGLLLLVTNESTKLVPFLSGEDKEY 65 Query: 438 V 440 + Sbjct: 66 I 66
>TRUB_AQUAE (O66922) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 287 Score = 56.2 bits (134), Expect = 4e-08 Identities = 28/64 (43%), Positives = 39/64 (60%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G + +DKP +S EVV +K L+ K GH+GTLDP TG LI+ +++ATR + G Sbjct: 3 GALLIDKPKGITSTEVVERVKEKLKARKAGHTGTLDPIATGLLIILINKATRFSQFFIGM 62 Query: 426 GKEY 437 K Y Sbjct: 63 PKTY 66
>TRUB_STAAW (Q8NWZ0) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 305 Score = 56.2 bits (134), Expect = 4e-08 Identities = 26/64 (40%), Positives = 41/64 (64%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ + K +SH+VV ++++L+ +K GH+GTLDP+V G L VC+ ATR+ Sbjct: 4 GILPVYKERGLTSHDVVFKLRKILKTKKIGHTGTLDPEVAGVLPVCIGNATRVSDYVMDM 63 Query: 426 GKEY 437 GK Y Sbjct: 64 GKAY 67
>TRUB_STAAS (Q6G9U2) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 305 Score = 56.2 bits (134), Expect = 4e-08 Identities = 26/64 (40%), Positives = 41/64 (64%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ + K +SH+VV ++++L+ +K GH+GTLDP+V G L VC+ ATR+ Sbjct: 4 GILPVYKERGLTSHDVVFKLRKILKTKKIGHTGTLDPEVAGVLPVCIGNATRVSDYVMDM 63 Query: 426 GKEY 437 GK Y Sbjct: 64 GKAY 67
>TRUB_STAAR (Q6GHG4) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 305 Score = 56.2 bits (134), Expect = 4e-08 Identities = 26/64 (40%), Positives = 41/64 (64%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ + K +SH+VV ++++L+ +K GH+GTLDP+V G L VC+ ATR+ Sbjct: 4 GILPVYKERGLTSHDVVFKLRKILKTKKIGHTGTLDPEVAGVLPVCIGNATRVSDYVMDM 63 Query: 426 GKEY 437 GK Y Sbjct: 64 GKAY 67
>TRUB_STAAN (P65855) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 305 Score = 56.2 bits (134), Expect = 4e-08 Identities = 26/64 (40%), Positives = 41/64 (64%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ + K +SH+VV ++++L+ +K GH+GTLDP+V G L VC+ ATR+ Sbjct: 4 GILPVYKERGLTSHDVVFKLRKILKTKKIGHTGTLDPEVAGVLPVCIGNATRVSDYVMDM 63 Query: 426 GKEY 437 GK Y Sbjct: 64 GKAY 67
>TRUB_STAAM (P65854) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 305 Score = 56.2 bits (134), Expect = 4e-08 Identities = 26/64 (40%), Positives = 41/64 (64%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ + K +SH+VV ++++L+ +K GH+GTLDP+V G L VC+ ATR+ Sbjct: 4 GILPVYKERGLTSHDVVFKLRKILKTKKIGHTGTLDPEVAGVLPVCIGNATRVSDYVMDM 63 Query: 426 GKEY 437 GK Y Sbjct: 64 GKAY 67
>TRUB_STAAC (Q5HGG0) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 305 Score = 56.2 bits (134), Expect = 4e-08 Identities = 26/64 (40%), Positives = 41/64 (64%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ + K +SH+VV ++++L+ +K GH+GTLDP+V G L VC+ ATR+ Sbjct: 4 GILPVYKERGLTSHDVVFKLRKILKTKKIGHTGTLDPEVAGVLPVCIGNATRVSDYVMDM 63 Query: 426 GKEY 437 GK Y Sbjct: 64 GKAY 67
>TRUB_STAAB (Q2YXP5) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 305 Score = 56.2 bits (134), Expect = 4e-08 Identities = 26/64 (40%), Positives = 41/64 (64%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ + K +SH+VV ++++L+ +K GH+GTLDP+V G L VC+ ATR+ Sbjct: 4 GILPVYKERGLTSHDVVFKLRKILKTKKIGHTGTLDPEVAGVLPVCIGNATRVSDYVMDM 63 Query: 426 GKEY 437 GK Y Sbjct: 64 GKAY 67
>TRUB_DEHSC (Q3ZXU5) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 300 Score = 56.2 bits (134), Expect = 4e-08 Identities = 25/65 (38%), Positives = 42/65 (64%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++N++KP +S +VVA ++R+ ++ GH GTLDP TG + V + R+TRL++ Sbjct: 3 GILNINKPFGITSFDVVAKVRRIYSQKRVGHGGTLDPYATGVIPVFLGRSTRLIEYLSSV 62 Query: 426 GKEYV 440 K Y+ Sbjct: 63 SKTYL 67
>TRUB_SYNEL (Q8CWM3) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 287 Score = 55.8 bits (133), Expect = 5e-08 Identities = 24/55 (43%), Positives = 39/55 (70%) Frame = +3 Query: 243 YGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLV 407 +G +NL+KP+ +SH+ + ++R LR+++ GH GTLDP TG L + + ATRL+ Sbjct: 2 FGFLNLNKPAGCTSHDCINELRRRLRLKRIGHGGTLDPMATGVLPIALGAATRLL 56
>TRUB_NOCFA (Q5YSE0) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 306 Score = 55.8 bits (133), Expect = 5e-08 Identities = 28/69 (40%), Positives = 42/69 (60%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ +DK +SH+VVA +++L K GH+GTLDP TG L++ V+RAT+L+ Sbjct: 16 GLLVVDKDGGMTSHDVVARCRKILGTRKIGHAGTLDPMATGVLVLGVERATKLLGLLTLT 75 Query: 426 GKEYVCIAR 452 K Y R Sbjct: 76 TKAYTATIR 84
>TRUB_PELLD (Q3B200) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 289 Score = 55.8 bits (133), Expect = 5e-08 Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 4/69 (5%) Frame = +3 Query: 258 LDKPSNPSSHEVVAWIKRLLR----VEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 LDKP + +S +VVA I+ + K GHSGTLDPK TG LI+ R T+ + S +G Sbjct: 20 LDKPLDWTSFDVVAKIRNTYKRGGLKRKVGHSGTLDPKATGLLILATGRKTKEIASLEGL 79 Query: 426 GKEYVCIAR 452 KEY+ + + Sbjct: 80 DKEYLAVIK 88
>TRUB_ONYPE (Q6YQY6) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 283 Score = 55.8 bits (133), Expect = 5e-08 Identities = 25/53 (47%), Positives = 36/53 (67%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRL 404 G ++KP +SH+VV IK+ +K GH+GTLDP +G LI+CV +AT+L Sbjct: 3 GFFLVNKPEKMTSHDVVFQIKKKFHFDKVGHTGTLDPLASGLLIICVGKATKL 55
>TRUB_VIBF1 (Q5E7L3) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 316 Score = 55.8 bits (133), Expect = 5e-08 Identities = 26/69 (37%), Positives = 42/69 (60%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GVI +DKP+ +S++ + +KR+ EK GH+G LDP TG L +C+ AT+ + + Sbjct: 12 GVILIDKPTGITSNDTLQKVKRIYFAEKAGHTGALDPLATGMLPICLGEATKFSQFLLDS 71 Query: 426 GKEYVCIAR 452 K Y +A+ Sbjct: 72 DKRYRVVAK 80
>TRUB_SHIBS (Q31W45) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 314 Score = 55.8 bits (133), Expect = 5e-08 Identities = 27/69 (39%), Positives = 39/69 (56%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ LDKP SS++ + +KR+ + GH+G LDP TG L +C AT+ + + Sbjct: 13 GVLLLDKPQGMSSNDALQKVKRIYNANRAGHTGALDPLATGMLPICFGEATKFSQYLLDS 72 Query: 426 GKEYVCIAR 452 K Y IAR Sbjct: 73 DKRYRVIAR 81
>TRUB_BLOPB (Q493T5) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 260 Score = 55.8 bits (133), Expect = 5e-08 Identities = 29/64 (45%), Positives = 38/64 (59%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ LDKP SS + IK+L +K GH+GTLDP TG L VC +AT+L K + Sbjct: 14 GILLLDKPKGISSGLFLNKIKKLFNAKKIGHTGTLDPLATGMLPVCFGKATKLAKYLLHS 73 Query: 426 GKEY 437 K Y Sbjct: 74 DKRY 77
>TRUB_XYLFA (Q9PGR1) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 302 Score = 55.5 bits (132), Expect = 6e-08 Identities = 27/64 (42%), Positives = 40/64 (62%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ LDKP+ SS+ + +RLLR +K GH+G+LDP TG L +C AT++ G+ Sbjct: 13 GILLLDKPAGISSNSALQIARRLLRAKKGGHTGSLDPLATGLLPLCFGEATKIAGLLLGS 72 Query: 426 GKEY 437 K Y Sbjct: 73 TKAY 76
>TRUB_PHOPR (Q6LUJ0) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 316 Score = 55.5 bits (132), Expect = 6e-08 Identities = 27/69 (39%), Positives = 41/69 (59%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GVI LDKP+ +S++ + +KR+ +K GH+G LDP TG L +C AT+ + + Sbjct: 12 GVILLDKPTGITSNDTLQKVKRIFFAQKAGHTGALDPLATGMLPICFGEATKFSQFLLDS 71 Query: 426 GKEYVCIAR 452 K Y IA+ Sbjct: 72 DKRYRVIAK 80
>TRUB_SHIDS (Q32BG7) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 314 Score = 55.5 bits (132), Expect = 6e-08 Identities = 27/69 (39%), Positives = 40/69 (57%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ LDKP SS++ + +KR+ + GH+G LDP TG L +C+ AT+ + + Sbjct: 13 GVLLLDKPQGMSSNDALQKVKRIYNANRAGHTGALDPLATGMLPICLGEATKFSQYLLDS 72 Query: 426 GKEYVCIAR 452 K Y IAR Sbjct: 73 DKLYRVIAR 81
>TRUB_CYTJO (Q9RB36) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 229 Score = 55.1 bits (131), Expect = 8e-08 Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 7/76 (9%) Frame = +3 Query: 231 EYLRYGVINLDKPSNPSSHEVVAWIKRLL-------RVEKTGHSGTLDPKVTGNLIVCVD 389 EYL V+ +DKP SS + V +K LL + K GH+GTLDP TG L++C Sbjct: 5 EYLEGQVLLIDKPLKWSSFQAVNKLKYLLINKVGLPKKFKIGHAGTLDPLATGLLLICTG 64 Query: 390 RATRLVKSQQGAGKEY 437 + T+ + QG KEY Sbjct: 65 KFTKKISELQGQAKEY 80
>TRUB_PROMP (P59882) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 305 Score = 55.1 bits (131), Expect = 8e-08 Identities = 27/68 (39%), Positives = 43/68 (63%) Frame = +3 Query: 237 LRYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQ 416 ++ G I ++K +SH+ V I++LL ++K GH+GTLDP VTG L + + ATR ++ Sbjct: 3 IKDGFIAINKEKGFTSHDCVKQIRKLLGIKKVGHTGTLDPDVTGTLPIAIGSATRFIQ-Y 61 Query: 417 QGAGKEYV 440 GK Y+ Sbjct: 62 LPQGKTYI 69
>TRUB_OCEIH (Q8CXG9) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 303 Score = 55.1 bits (131), Expect = 8e-08 Identities = 25/65 (38%), Positives = 40/65 (61%) Frame = +3 Query: 243 YGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQG 422 +G++ L KP +SH+ V +R + +K GH+GTLDP+V G L +C+ +AT++V Sbjct: 2 HGILPLWKPKGLTSHDCVMRCRRYFKTKKVGHTGTLDPEVEGVLPICIGQATKIVPFLTD 61 Query: 423 AGKEY 437 K Y Sbjct: 62 TKKVY 66
>TRUB_NEIG1 (Q5F8W8) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 306 Score = 54.7 bits (130), Expect = 1e-07 Identities = 31/78 (39%), Positives = 40/78 (51%) Frame = +3 Query: 204 HSPLKRPLAEYLRYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVC 383 + P KRP+ GV+ LDKP SS+ + +RL EK GH+G LDP TG L VC Sbjct: 3 NKPAKRPVN-----GVLLLDKPEGLSSNTALQKARRLFHAEKAGHTGVLDPLATGLLPVC 57 Query: 384 VDRATRLVKSQQGAGKEY 437 A + + A K Y Sbjct: 58 FGEAAKFAQYLLDADKAY 75
>TRUB_GEOSL (P60344) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 304 Score = 54.7 bits (130), Expect = 1e-07 Identities = 28/64 (43%), Positives = 39/64 (60%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G I +DKP +SH+VVA +++ LR +K GH+GTLDP TG L V V T+ + + Sbjct: 3 GFIVIDKPIGLTSHDVVARVRQTLRQKKAGHTGTLDPFATGVLPVAVGEGTKAIPYLDES 62 Query: 426 GKEY 437 K Y Sbjct: 63 TKVY 66
>TRUB_BDEBA (Q6MMS4) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 308 Score = 54.7 bits (130), Expect = 1e-07 Identities = 25/53 (47%), Positives = 36/53 (67%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRL 404 G++ +DKPS SSH+VVA ++R+L GHSGTLDP +G + V+ T+L Sbjct: 9 GLLLVDKPSGISSHDVVARLRRILSTRAVGHSGTLDPMASGLMACLVNEGTKL 61
>TRUB_PSEAE (P72154) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) (Osmoprotectant regulator of PLC) (ORP protein) Length = 304 Score = 54.3 bits (129), Expect = 1e-07 Identities = 27/69 (39%), Positives = 40/69 (57%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ LDKP SS++ + ++ LL EK GH+G+LDP TG L +C AT+ + A Sbjct: 13 GILVLDKPRGMSSNQALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFGEATKFSQYLLDA 72 Query: 426 GKEYVCIAR 452 K Y + R Sbjct: 73 DKGYETVMR 81
>TRUB_CLOAB (Q97I48) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 289 Score = 54.3 bits (129), Expect = 1e-07 Identities = 22/54 (40%), Positives = 39/54 (72%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLV 407 G++N+ KP +S +VV +K++ + +K GH+GTLDP +G L +C+ +AT++V Sbjct: 3 GILNIFKPIGLTSFDVVRQVKKISKEKKVGHTGTLDPLASGVLPICIGKATKIV 56
>TRUB_STAS1 (Q49X59) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 305 Score = 54.3 bits (129), Expect = 1e-07 Identities = 24/64 (37%), Positives = 42/64 (65%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ + K +SH+VV ++++L+ +K GH+GTLDP+V+G L +C+ AT++ Sbjct: 4 GILPVFKDRGLTSHDVVFKLRKILKTKKVGHTGTLDPEVSGVLPICIGSATKVSDYIMEM 63 Query: 426 GKEY 437 GK Y Sbjct: 64 GKTY 67
>TRUB_LACJO (Q74IT0) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 297 Score = 54.3 bits (129), Expect = 1e-07 Identities = 22/65 (33%), Positives = 43/65 (66%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ ++KP +S + V ++++L++ K GH+GTLDP+V G L + + +AT+L++ Sbjct: 4 GIVVVNKPRGVTSSDCVYKLRKILQIRKIGHAGTLDPEVNGVLPIAIGQATKLIELMHEK 63 Query: 426 GKEYV 440 K Y+ Sbjct: 64 PKSYI 68
>TRUB_IDILO (Q5QTZ0) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 310 Score = 54.3 bits (129), Expect = 1e-07 Identities = 27/64 (42%), Positives = 37/64 (57%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ L+KP SS+ + +KRL +K GH+G LDP TG L VC+ AT+ + A Sbjct: 14 GVVLLNKPQGMSSNHALQRVKRLYNAQKAGHTGALDPLATGILPVCLGEATKFSQYLLDA 73 Query: 426 GKEY 437 K Y Sbjct: 74 DKAY 77
>TRUB_BORPE (P65852) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 244 Score = 54.3 bits (129), Expect = 1e-07 Identities = 28/64 (43%), Positives = 37/64 (57%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ LDKP SS+ + KR + K GH+GTLDP TG L+ C+ RAT++ A Sbjct: 11 GVLLLDKPVGLSSNHALQRAKRTVDAAKAGHTGTLDPFATGLLVCCMGRATKISGRMLEA 70 Query: 426 GKEY 437 K Y Sbjct: 71 DKTY 74
>TRUB_BORPA (P59874) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 244 Score = 54.3 bits (129), Expect = 1e-07 Identities = 28/64 (43%), Positives = 37/64 (57%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ LDKP SS+ + KR + K GH+GTLDP TG L+ C+ RAT++ A Sbjct: 11 GVLLLDKPVGLSSNHALQRAKRTVDAAKAGHTGTLDPFATGLLVCCMGRATKISGRMLEA 70 Query: 426 GKEY 437 K Y Sbjct: 71 DKTY 74
>TRUB_BORBR (P65853) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 244 Score = 54.3 bits (129), Expect = 1e-07 Identities = 28/64 (43%), Positives = 37/64 (57%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ LDKP SS+ + KR + K GH+GTLDP TG L+ C+ RAT++ A Sbjct: 11 GVLLLDKPVGLSSNHALQRAKRTVDAAKAGHTGTLDPFATGLLVCCMGRATKISGRMLEA 70 Query: 426 GKEY 437 K Y Sbjct: 71 DKTY 74
>TRUB_NEIMB (Q9JYY1) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 307 Score = 53.9 bits (128), Expect = 2e-07 Identities = 28/64 (43%), Positives = 35/64 (54%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ LDKP SS+ + +RL EK GH+G LDP TG L VC AT+ + A Sbjct: 13 GVLLLDKPEGLSSNTALQKARRLFHAEKAGHTGVLDPLATGLLPVCFGEATKFAQYLLDA 72 Query: 426 GKEY 437 K Y Sbjct: 73 DKAY 76
>TRUB_BURS3 (Q39H28) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 322 Score = 53.9 bits (128), Expect = 2e-07 Identities = 29/69 (42%), Positives = 39/69 (56%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ LDKP SS++ + KRLL +K GH+GTLDP +G L +C AT+ + A Sbjct: 30 GVLLLDKPVGLSSNDALIRAKRLLLAKKAGHTGTLDPLASGLLPLCFGEATKFSQDLLEA 89 Query: 426 GKEYVCIAR 452 K Y R Sbjct: 90 DKTYEATMR 98
>TRUB_CHLAB (Q5L629) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 235 Score = 53.5 bits (127), Expect = 2e-07 Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%) Frame = +3 Query: 225 LAEYLRYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRA-TR 401 LA L+ G++ +DKP +S ++ + +L+ V+K GH+GTLDP TG +++ + R TR Sbjct: 3 LATELKEGILLIDKPQGRTSFSLIRTLTKLIGVKKIGHAGTLDPFATGVMVMLIGRRFTR 62 Query: 402 LVKSQQGAGKEYVCIA 449 L KEY +A Sbjct: 63 LSDVLLFEDKEYAAVA 78
>TRUB_NITEU (Q820P2) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 308 Score = 53.5 bits (127), Expect = 2e-07 Identities = 27/65 (41%), Positives = 36/65 (55%) Frame = +3 Query: 258 LDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAGKEY 437 L+KPS SS+ + KRLL K GH+GTLDP G L +C+ AT+ + G K Y Sbjct: 2 LNKPSGISSNRALQISKRLLSAAKAGHTGTLDPMAQGLLPICLGEATKFSSTLLGVDKTY 61 Query: 438 VCIAR 452 + R Sbjct: 62 IASLR 66
>TRUB_PSYAR (Q4FVL3) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 380 Score = 53.5 bits (127), Expect = 2e-07 Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 5/69 (7%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRV-----EKTGHSGTLDPKVTGNLIVCVDRATRLVK 410 GVI +DKP +S +VV+ +K L + +K GH+GTLDP TG L +C+ AT+ Sbjct: 23 GVILVDKPQGMTSQQVVSKVKYLFKSPNHDSKKAGHTGTLDPMATGLLPICLGEATKFSH 82 Query: 411 SQQGAGKEY 437 Q A K Y Sbjct: 83 YQLDADKSY 91
>TRUB_BURPS (Q63TQ0) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 311 Score = 53.1 bits (126), Expect = 3e-07 Identities = 28/69 (40%), Positives = 39/69 (56%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ LDKP SS++ + KRL + +K GH+GTLDP +G L +C AT+ + A Sbjct: 17 GVLLLDKPVGLSSNDALMRAKRLYQAKKAGHTGTLDPLASGLLPLCFGEATKFSQDLLEA 76 Query: 426 GKEYVCIAR 452 K Y R Sbjct: 77 DKTYEATMR 85
>TRUB_BURMA (Q62KL1) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 311 Score = 53.1 bits (126), Expect = 3e-07 Identities = 28/69 (40%), Positives = 39/69 (56%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ LDKP SS++ + KRL + +K GH+GTLDP +G L +C AT+ + A Sbjct: 17 GVLLLDKPVGLSSNDALMRAKRLYQAKKAGHTGTLDPLASGLLPLCFGEATKFSQDLLEA 76 Query: 426 GKEYVCIAR 452 K Y R Sbjct: 77 DKTYEATMR 85
>TRUB_BURP1 (Q3JSY7) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 302 Score = 53.1 bits (126), Expect = 3e-07 Identities = 28/69 (40%), Positives = 39/69 (56%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ LDKP SS++ + KRL + +K GH+GTLDP +G L +C AT+ + A Sbjct: 8 GVLLLDKPVGLSSNDALMRAKRLYQAKKAGHTGTLDPLASGLLPLCFGEATKFSQDLLEA 67 Query: 426 GKEYVCIAR 452 K Y R Sbjct: 68 DKTYEATMR 76
>TRUB_XYLFT (Q87EV2) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 302 Score = 52.8 bits (125), Expect = 4e-07 Identities = 26/64 (40%), Positives = 39/64 (60%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ LDKP+ SS+ + +RLLR +K GH+G+LDP TG L +C AT++ + Sbjct: 13 GILLLDKPAGISSNSALQVARRLLRAKKGGHTGSLDPLATGLLPLCFGEATKIAGLLLDS 72 Query: 426 GKEY 437 K Y Sbjct: 73 TKAY 76
>TRUB_TROW8 (Q820Z5) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 383 Score = 52.8 bits (125), Expect = 4e-07 Identities = 28/64 (43%), Positives = 37/64 (57%) Frame = +3 Query: 249 VINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAG 428 V+ +DK S +SH VA I+ L V+K GH GTLDP G LI+ ATRL++ Sbjct: 19 VLLVDKISGITSHTAVAKIRHLTGVKKIGHCGTLDPAACGLLIMGCGTATRLIRYMSNLD 78 Query: 429 KEYV 440 K Y+ Sbjct: 79 KRYI 82
>TRUB_STAES (Q8CMM6) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 305 Score = 52.8 bits (125), Expect = 4e-07 Identities = 24/64 (37%), Positives = 42/64 (65%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ + K +SH+VV ++++L+++K GH+GTLDP+V G L +C+ AT++ Sbjct: 4 GILPVFKERGLTSHDVVFKLRKILKMKKIGHTGTLDPEVNGVLPICLGDATKVSDYIMEM 63 Query: 426 GKEY 437 GK Y Sbjct: 64 GKTY 67
>TRUB_STAEQ (Q5HPS0) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 305 Score = 52.8 bits (125), Expect = 4e-07 Identities = 24/64 (37%), Positives = 42/64 (65%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ + K +SH+VV ++++L+++K GH+GTLDP+V G L +C+ AT++ Sbjct: 4 GILPVFKERGLTSHDVVFKLRKILKMKKIGHTGTLDPEVNGVLPICLGDATKVSDYIMEM 63 Query: 426 GKEY 437 GK Y Sbjct: 64 GKTY 67
>TRUB_SYNPX (P59884) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 291 Score = 52.4 bits (124), Expect = 5e-07 Identities = 23/55 (41%), Positives = 37/55 (67%) Frame = +3 Query: 243 YGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLV 407 +G + +DKP+ +SH V+ ++R +++ GH GTLDP VTG L + + ATRL+ Sbjct: 5 FGFVVIDKPAGHTSHSCVSRLRRCYGLKRVGHGGTLDPAVTGVLPIALGPATRLL 59
>TRUB_MYCMS (Q6MTR0) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 292 Score = 52.4 bits (124), Expect = 5e-07 Identities = 25/64 (39%), Positives = 40/64 (62%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G+ L+KPSN S+++++ +K+ L ++K GH GTLD TG +I V+ AT++ A Sbjct: 5 GIFILNKPSNISTYQLINQVKKKLNIKKVGHCGTLDLLATGVVICLVNNATKISDYLLNA 64 Query: 426 GKEY 437 K Y Sbjct: 65 NKAY 68
>TRUB_TROWT (Q820Y5) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 377 Score = 52.4 bits (124), Expect = 5e-07 Identities = 27/64 (42%), Positives = 37/64 (57%) Frame = +3 Query: 249 VINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAG 428 V+ +DK S +SH VA I+ L ++K GH GTLDP G LI+ ATRL++ Sbjct: 19 VLLVDKISGITSHTAVAKIRHLTGIKKIGHCGTLDPAACGLLIMGCGTATRLIRYMSNLD 78 Query: 429 KEYV 440 K Y+ Sbjct: 79 KRYI 82
>TRUB_CHLPN (Q9Z8L9) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 235 Score = 52.0 bits (123), Expect = 7e-07 Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 1/76 (1%) Frame = +3 Query: 225 LAEYLRYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRA-TR 401 LA L+ G++ +DKP +S ++ + +L+ V+K GH+GTLDP TG +++ + R TR Sbjct: 3 LAVELKEGILLVDKPQGRTSFSLIRALTKLIGVKKIGHAGTLDPFATGVMVMLIGRKFTR 62 Query: 402 LVKSQQGAGKEYVCIA 449 L KEY IA Sbjct: 63 LSDILLFEDKEYEAIA 78
>TRUB_BUCAP (Q8K9H3) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 312 Score = 52.0 bits (123), Expect = 7e-07 Identities = 26/69 (37%), Positives = 38/69 (55%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G + LDKP +S+ V+ +K + + +K G+ GTLDP TG L +C AT+ + Sbjct: 11 GFLLLDKPKGMTSNNVLQKVKIIFKAKKAGYIGTLDPLATGILPICFGEATKFSNYLNAS 70 Query: 426 GKEYVCIAR 452 K Y IAR Sbjct: 71 DKHYNVIAR 79
>TRUB_ANAMM (Q5PAY2) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 306 Score = 52.0 bits (123), Expect = 7e-07 Identities = 28/67 (41%), Positives = 39/67 (58%) Frame = +3 Query: 237 LRYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQ 416 ++YG +N+DKP + SS VV +K++ K GH+GTLDP TG L V V AT+ + Sbjct: 6 VKYGWLNVDKPLHMSSGSVVGRVKKIFNC-KVGHAGTLDPLATGVLPVAVGEATKTIPYA 64 Query: 417 QGAGKEY 437 K Y Sbjct: 65 VDGLKSY 71
>TRUB_PROMA (P59880) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 313 Score = 52.0 bits (123), Expect = 7e-07 Identities = 22/54 (40%), Positives = 38/54 (70%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLV 407 G + ++KP+ +SH+ V ++R+ +++ GH GTLDP VTG L + + +ATRL+ Sbjct: 7 GFLVINKPAGLTSHDCVNRLRRIYGIKRIGHGGTLDPAVTGVLPIAIGKATRLL 60
>TRUB_RHILO (Q98BI6) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 325 Score = 52.0 bits (123), Expect = 7e-07 Identities = 28/64 (43%), Positives = 36/64 (56%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G + LDKP S E V+ IK L + EK GH+GTLDP +G L + + AT+ V Q Sbjct: 14 GWVVLDKPVGMGSTEAVSKIKWLFQAEKAGHAGTLDPLASGMLPIALGEATKTVPYVQDG 73 Query: 426 GKEY 437 K Y Sbjct: 74 AKIY 77
>TRUB_NITWN (Q3SWP7) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 358 Score = 52.0 bits (123), Expect = 7e-07 Identities = 25/65 (38%), Positives = 37/65 (56%) Frame = +3 Query: 243 YGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQG 422 +G + LDKP +S + VA +KRL ++ GH+GTLDP +G L + + AT+ V Sbjct: 51 HGWVALDKPVGMTSTQAVAVVKRLFSAKRAGHAGTLDPLASGGLPIALGEATKTVPFVMD 110 Query: 423 AGKEY 437 K Y Sbjct: 111 GRKRY 115
>TRUB_PROM9 (Q319E0) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 307 Score = 51.6 bits (122), Expect = 9e-07 Identities = 25/65 (38%), Positives = 39/65 (60%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G + ++K +SH+ V I++LL K GH+GTLDP+V G L + + ATR ++ Sbjct: 6 GFLVINKDKGCTSHDCVKQIRKLLNTRKVGHTGTLDPEVIGTLPIAIGSATRFIQ-YLPQ 64 Query: 426 GKEYV 440 GK Y+ Sbjct: 65 GKTYI 69
>TRUB_DESVH (Q72ER4) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 304 Score = 51.6 bits (122), Expect = 9e-07 Identities = 25/55 (45%), Positives = 40/55 (72%) Frame = +3 Query: 240 RYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRL 404 ++G++ LDKPS PSS + ++ +KRL + +K GH+GTLDP G L+V + AT++ Sbjct: 5 QHGLLVLDKPSGPSSAQCISKVKRLGQ-KKIGHAGTLDPMAGGVLLVLLGHATKI 58
>TRUB_BRAJA (Q89WB1) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 345 Score = 51.6 bits (122), Expect = 9e-07 Identities = 25/65 (38%), Positives = 37/65 (56%) Frame = +3 Query: 243 YGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQG 422 +G + LDKP +S + VA +KRL ++ GH+GTLDP +G L + + AT+ V Sbjct: 36 HGWVVLDKPIGMTSTQAVAVLKRLFNAKRAGHAGTLDPLASGGLPIALGEATKTVPFVMD 95 Query: 423 AGKEY 437 K Y Sbjct: 96 GRKRY 100
>TRUB_RHOPA (P60345) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 366 Score = 51.2 bits (121), Expect = 1e-06 Identities = 25/65 (38%), Positives = 37/65 (56%) Frame = +3 Query: 243 YGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQG 422 +G + LDKP +S + VA +KRL ++ GH+GTLDP +G L + + AT+ V Sbjct: 56 HGWVVLDKPIGMTSTQAVAVLKRLFSAKRAGHAGTLDPLASGGLPIAMGEATKTVPFVMD 115 Query: 423 AGKEY 437 K Y Sbjct: 116 GRKRY 120
>TRUB_CHLTR (O84096) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 241 Score = 51.2 bits (121), Expect = 1e-06 Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 1/69 (1%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRA-TRLVKSQQG 422 GV+ +DKP +S ++ + RL+ V+K GH+GTLDP TG +++ + R TRL Sbjct: 10 GVLLVDKPQGRTSFSLIRSLVRLIGVKKIGHAGTLDPFATGVMVMLIGRKFTRLSDIMLF 69 Query: 423 AGKEYVCIA 449 KEY +A Sbjct: 70 EDKEYAAVA 78
>TRUB_COLP3 (Q482T7) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 318 Score = 51.2 bits (121), Expect = 1e-06 Identities = 25/69 (36%), Positives = 37/69 (53%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ LDKP SS+ + +KR+ +K GH+G LDP TG L +C+ T+ + Sbjct: 12 GVLLLDKPHGLSSNHALQTVKRIYFAQKAGHTGALDPLATGMLPICLGEGTKFSQYLLDT 71 Query: 426 GKEYVCIAR 452 K Y A+ Sbjct: 72 DKTYQVTAK 80
>TRUB_PSEU2 (Q4ZNR4) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 305 Score = 51.2 bits (121), Expect = 1e-06 Identities = 26/69 (37%), Positives = 40/69 (57%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G+I LDKP +S+ + ++ LL EK GH+G+LDP TG L +C AT+ + + Sbjct: 13 GIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFGEATKFSQYLLDS 72 Query: 426 GKEYVCIAR 452 K Y +A+ Sbjct: 73 DKSYETLAQ 81
>TRUB_PSE14 (Q48E79) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 305 Score = 51.2 bits (121), Expect = 1e-06 Identities = 26/69 (37%), Positives = 40/69 (57%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G+I LDKP +S+ + ++ LL EK GH+G+LDP TG L +C AT+ + + Sbjct: 13 GIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFGEATKFSQYLLDS 72 Query: 426 GKEYVCIAR 452 K Y +A+ Sbjct: 73 DKSYETLAQ 81
>TRUB_MYCCT (Q2SSF2) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 292 Score = 50.8 bits (120), Expect = 2e-06 Identities = 24/64 (37%), Positives = 39/64 (60%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G+ L+KP N S+++++ +K+ L ++K GH GTLD TG +I V+ AT++ A Sbjct: 5 GIFILNKPKNISTYQLINQVKKKLNIKKVGHCGTLDLLATGVVICLVNNATKISDYLLNA 64 Query: 426 GKEY 437 K Y Sbjct: 65 NKAY 68
>TRUB_DECAR (Q47D96) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 299 Score = 50.8 bits (120), Expect = 2e-06 Identities = 26/69 (37%), Positives = 37/69 (53%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ LDKP +S++ + +RL K GH+GTLDP TG L +C AT+ A Sbjct: 12 GVLLLDKPLGMTSNDALQKARRLFSAAKGGHTGTLDPLATGLLPLCFGEATKFSADLLDA 71 Query: 426 GKEYVCIAR 452 K Y + + Sbjct: 72 DKTYEAVLK 80
>TRUB_LEGPL (Q5WT38) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 303 Score = 50.8 bits (120), Expect = 2e-06 Identities = 25/69 (36%), Positives = 38/69 (55%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ L+KP +S+ + K L +K GH+G+LDP TG L +C AT++ + A Sbjct: 12 GILLLNKPQGMTSNAALQKAKHLFGAKKAGHTGSLDPLATGMLPLCFGEATKICQYLLNA 71 Query: 426 GKEYVCIAR 452 K Y I R Sbjct: 72 DKSYETIGR 80
>TRUB_LEGPH (Q5ZRV6) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 303 Score = 50.8 bits (120), Expect = 2e-06 Identities = 25/69 (36%), Positives = 38/69 (55%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ L+KP +S+ + K L +K GH+G+LDP TG L +C AT++ + A Sbjct: 12 GILLLNKPQGMTSNAALQKTKHLFGAKKAGHTGSLDPLATGMLPLCFGEATKICQYLLNA 71 Query: 426 GKEYVCIAR 452 K Y I R Sbjct: 72 DKSYETIGR 80
>TRUB_LEGPA (Q5X1C5) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 303 Score = 50.8 bits (120), Expect = 2e-06 Identities = 25/69 (36%), Positives = 38/69 (55%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ L+KP +S+ + K L +K GH+G+LDP TG L +C AT++ + A Sbjct: 12 GILLLNKPQGMTSNAALQKAKHLFGAKKAGHTGSLDPLATGMLPLCFGEATKICQYLLNA 71 Query: 426 GKEYVCIAR 452 K Y I R Sbjct: 72 DKSYETIGR 80
>TRUB_METCA (Q609C2) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 224 Score = 50.4 bits (119), Expect = 2e-06 Identities = 26/69 (37%), Positives = 41/69 (59%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ LDK S +S+ + ++LL + K GH+G+LDP +G L +C + AT+L + Sbjct: 11 GVLLLDKGSGMTSNSALQRARKLLDMRKAGHTGSLDPLASGILPLCFNEATKLSSYLLDS 70 Query: 426 GKEYVCIAR 452 K Y +AR Sbjct: 71 DKRYRVLAR 79
>TRUB_CHLMU (Q9PKU2) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 241 Score = 50.4 bits (119), Expect = 2e-06 Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 1/69 (1%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRA-TRLVKSQQG 422 GV+ +DKP +S ++ + RL+ V+K GH+GTLDP TG +++ + R TRL Sbjct: 10 GVLLVDKPQGRTSFSLIRSLVRLIGVKKIGHAGTLDPFATGVMVMLIGRKFTRLSDIMLF 69 Query: 423 AGKEYVCIA 449 KEY +A Sbjct: 70 EDKEYSAVA 78
>TRUB_NITOC (Q3J9B8) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 308 Score = 50.4 bits (119), Expect = 2e-06 Identities = 25/70 (35%), Positives = 40/70 (57%) Frame = +3 Query: 243 YGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQG 422 +G++ LDKP SS+ + +K++ + K GH+G+LDP G L +C+ AT+L Sbjct: 13 HGMLLLDKPVGISSNGALQRVKQIYQARKAGHTGSLDPLANGLLPICLGEATKLSGFLLE 72 Query: 423 AGKEYVCIAR 452 A K Y + R Sbjct: 73 ADKRYQVMCR 82
>TRUB_AZOSE (Q5NZR9) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 308 Score = 50.4 bits (119), Expect = 2e-06 Identities = 27/69 (39%), Positives = 37/69 (53%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ LDKP +S+ + +RLL K GH+GTLDP TG L + + AT+ + A Sbjct: 16 GVLLLDKPRGLTSNAALQTARRLLNAAKAGHTGTLDPMATGLLPLTLGEATKFSQMLLDA 75 Query: 426 GKEYVCIAR 452 K Y R Sbjct: 76 DKAYEATVR 84
>TRUB_PSEPF (Q3KI82) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 305 Score = 50.4 bits (119), Expect = 2e-06 Identities = 26/69 (37%), Positives = 40/69 (57%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G+I LDKP +S+ + ++ LL EK GH+G+LDP TG L +C AT+ + + Sbjct: 13 GIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFGEATKFSQYLLDS 72 Query: 426 GKEYVCIAR 452 K Y +A+ Sbjct: 73 DKGYETLAQ 81
>TRUB_PSEF5 (Q4KIF4) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 305 Score = 50.4 bits (119), Expect = 2e-06 Identities = 26/69 (37%), Positives = 40/69 (57%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G+I LDKP +S+ + ++ LL EK GH+G+LDP TG L +C AT+ + + Sbjct: 13 GIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFGEATKFSQYLLDS 72 Query: 426 GKEYVCIAR 452 K Y +A+ Sbjct: 73 DKGYETLAQ 81
>TRUB_MYCPE (Q8CXQ2) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 232 Score = 50.1 bits (118), Expect = 3e-06 Identities = 25/68 (36%), Positives = 41/68 (60%) Frame = +3 Query: 237 LRYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQ 416 L+ + ++KP N SS++V+ IK+ ++K GH+GTLDP TG L+V + T+ + Sbjct: 15 LKDKIFGINKPKNFSSNQVIQIIKKYYGLKKIGHAGTLDPLATGLLLVATNSKTKELNEL 74 Query: 417 QGAGKEYV 440 K+YV Sbjct: 75 ILENKKYV 82
>TRUB_MESFL (Q6F1I4) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 286 Score = 49.7 bits (117), Expect = 3e-06 Identities = 22/53 (41%), Positives = 36/53 (67%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRL 404 G+I L+KP +++ ++ +KR L V+K GH+GTLDP TG +I ++ T+L Sbjct: 5 GIIILNKPKGLTTNHLIQKLKRKLNVKKIGHAGTLDPLATGVVICLINNGTKL 57
>TRUB_DEHE1 (Q3Z7U5) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 300 Score = 49.7 bits (117), Expect = 3e-06 Identities = 23/65 (35%), Positives = 38/65 (58%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++N++KP +S VV+ ++ + +K GH G LDP TG + V + ATRL++ Sbjct: 3 GILNINKPPGLTSFGVVSKVRHIYSQKKVGHGGMLDPSATGVIPVFLGSATRLIEYLSSV 62 Query: 426 GKEYV 440 K Y+ Sbjct: 63 RKTYL 67
>TRUB_BARHE (Q6G5F5) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 319 Score = 49.3 bits (116), Expect = 5e-06 Identities = 27/64 (42%), Positives = 34/64 (53%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G I LDKP S E V+ IK L +K GH+GTLDP +G L + + AT+ V Sbjct: 14 GWIILDKPKGMRSTEAVSQIKYLFHAQKVGHAGTLDPLASGLLPIALGEATKTVPYVMQG 73 Query: 426 GKEY 437 K Y Sbjct: 74 TKTY 77
>TRUB_UREPA (Q9PQD7) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 227 Score = 49.3 bits (116), Expect = 5e-06 Identities = 22/64 (34%), Positives = 41/64 (64%) Frame = +3 Query: 249 VINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAG 428 +I ++KP +S++VV +KR++ +K GH+GTLDP +G L++ ++ T+L+ Sbjct: 8 IIIINKPIKWTSNDVVQKVKRVIGAKKVGHAGTLDPNASGVLVLGINEGTKLLTKLILDN 67 Query: 429 KEYV 440 K Y+ Sbjct: 68 KSYI 71
>TRUB_ACIAD (Q6F7I5) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 318 Score = 49.3 bits (116), Expect = 5e-06 Identities = 25/69 (36%), Positives = 38/69 (55%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV L+KP SS+ V+ ++ L R +K GH+G LDP TG L +C+ AT+ + Sbjct: 32 GVFLLNKPLGLSSNGVLQKVRWLFRAQKAGHTGALDPLATGLLPICLGEATKFSHYLLDS 91 Query: 426 GKEYVCIAR 452 K Y + + Sbjct: 92 TKRYQTVVK 100
>TRUB_THICR (Q31GK3) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 303 Score = 49.3 bits (116), Expect = 5e-06 Identities = 21/65 (32%), Positives = 39/65 (60%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ L+KP +S+ ++ ++R+ +K GH+G LDP TG L +C+ AT++ + Sbjct: 11 GIVLLNKPEGVTSNGLLQQVRRVYNAKKAGHTGALDPFATGLLPICLGEATKISGLLLDS 70 Query: 426 GKEYV 440 K Y+ Sbjct: 71 DKRYI 75
>TRUB_BLOFL (P59877) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 255 Score = 48.9 bits (115), Expect = 6e-06 Identities = 25/65 (38%), Positives = 37/65 (56%) Frame = +3 Query: 243 YGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQG 422 +G++ LDKP+ SS + IK+L +K G+ GTLDP TG L +C +AT+ Sbjct: 16 HGLLLLDKPTGFSSSFFLNKIKKLFYAKKVGYIGTLDPIATGMLPICFGKATKFASYLLN 75 Query: 423 AGKEY 437 + K Y Sbjct: 76 SDKRY 80
>TRUB_CHRVO (Q7MBF7) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 306 Score = 48.9 bits (115), Expect = 6e-06 Identities = 27/69 (39%), Positives = 36/69 (52%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ +DKP + SS+ + + LL K GH+G LDP TG L VC+ AT+ A Sbjct: 13 GVLLIDKPYDISSNNALQKARWLLNAAKAGHTGVLDPLATGLLPVCLGEATKFSSYLLDA 72 Query: 426 GKEYVCIAR 452 K Y R Sbjct: 73 DKGYRATVR 81
>TRUB_BUCAI (P57456) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 312 Score = 48.9 bits (115), Expect = 6e-06 Identities = 24/70 (34%), Positives = 38/70 (54%) Frame = +3 Query: 243 YGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQG 422 +G++ LDKP SS+ + +K L +K G+ GTLDP TG L +C ++ Sbjct: 10 HGLLLLDKPQGISSNNALQKVKMLFSAKKAGYIGTLDPLATGMLPICFGECSKFSHYLME 69 Query: 423 AGKEYVCIAR 452 + K+Y IA+ Sbjct: 70 SNKKYHVIAK 79
>TRUB_SILPO (Q5LLT4) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 303 Score = 48.5 bits (114), Expect = 8e-06 Identities = 27/69 (39%), Positives = 38/69 (55%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G + +DKP+ +S VV ++ L K GH+GTLDP+ TG L + + AT+ V A Sbjct: 12 GWLVVDKPAGMTSTAVVNKVRWALGANKAGHAGTLDPEATGVLAIALGEATKTVPYITDA 71 Query: 426 GKEYVCIAR 452 K YV R Sbjct: 72 LKAYVFTVR 80
>TRUB_BRUME (Q8YEB5) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 324 Score = 48.5 bits (114), Expect = 8e-06 Identities = 26/64 (40%), Positives = 33/64 (51%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G + DKP S E V+ IK L EK GH+GTLDP +G L + + AT+ V Sbjct: 14 GWVIFDKPKGMGSTEAVSKIKWLFSAEKAGHAGTLDPLASGMLPIALGEATKTVPYAMDG 73 Query: 426 GKEY 437 K Y Sbjct: 74 TKVY 77
>TRUB_CAUCR (P58063) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 310 Score = 48.1 bits (113), Expect = 1e-05 Identities = 25/64 (39%), Positives = 36/64 (56%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G + LDKP + +S V+ ++R +K GH+GTLDP TG L + + AT+ V A Sbjct: 12 GWLCLDKPYDLTSTTAVSRVRRAFNAQKGGHAGTLDPLATGILPIALGEATKTVPFLMDA 71 Query: 426 GKEY 437 K Y Sbjct: 72 DKAY 75
>TRUB_BRUSU (P59876) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 324 Score = 48.1 bits (113), Expect = 1e-05 Identities = 26/64 (40%), Positives = 33/64 (51%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G + DKP S E V+ IK L EK GH+GTLDP +G L + + AT+ V Sbjct: 14 GWVIFDKPKGMGSTEAVSKIKWLFSAEKAGHAGTLDPLASGMLPIALGEATKTVPYVMDG 73 Query: 426 GKEY 437 K Y Sbjct: 74 TKVY 77
>TRUB_BRUAB (Q57A98) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 324 Score = 48.1 bits (113), Expect = 1e-05 Identities = 26/64 (40%), Positives = 33/64 (51%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G + DKP S E V+ IK L EK GH+GTLDP +G L + + AT+ V Sbjct: 14 GWVIFDKPKGMGSTEAVSKIKWLFSAEKAGHAGTLDPLASGMLPIALGEATKTVPYVMDG 73 Query: 426 GKEY 437 K Y Sbjct: 74 TKVY 77
>TRUB_BRUA2 (Q2YQR5) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 324 Score = 48.1 bits (113), Expect = 1e-05 Identities = 26/64 (40%), Positives = 33/64 (51%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G + DKP S E V+ IK L EK GH+GTLDP +G L + + AT+ V Sbjct: 14 GWVIFDKPKGMGSTEAVSKIKWLFSAEKAGHAGTLDPLASGMLPIALGEATKTVPYVMDG 73 Query: 426 GKEY 437 K Y Sbjct: 74 TKVY 77
>TRUB_DESDG (Q30WI7) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 309 Score = 48.1 bits (113), Expect = 1e-05 Identities = 24/55 (43%), Positives = 38/55 (69%) Frame = +3 Query: 240 RYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRL 404 ++GV+ L+KP P+S +A IKRL + +K GH+GTLDP G L+V + + T++ Sbjct: 9 QHGVLVLNKPKGPTSAHCIARIKRLGQ-KKIGHAGTLDPMAQGVLLVLLGQCTKI 62
>TRUB_RHIME (Q92SW2) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 311 Score = 47.8 bits (112), Expect = 1e-05 Identities = 29/76 (38%), Positives = 41/76 (53%) Frame = +3 Query: 210 PLKRPLAEYLRYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVD 389 P RP++ G + LDKP + S E V+ IK L + +K GH+GTLDP +G L + + Sbjct: 7 PKGRPIS-----GWLILDKPLDFGSTEAVSKIKWLFKAQKAGHAGTLDPLASGMLPIALG 61 Query: 390 RATRLVKSQQGAGKEY 437 AT+ V K Y Sbjct: 62 DATKTVPYVMDGRKIY 77
>TRUB_PSEHT (Q3IJ75) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 319 Score = 47.4 bits (111), Expect = 2e-05 Identities = 24/69 (34%), Positives = 37/69 (53%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G++ L+KP SS++ + K + +K GH+G LDP TG L +C AT+ + Sbjct: 12 GILLLNKPIGISSNKALQQTKGVYFAQKAGHTGALDPLATGMLPICFGEATKFTQFLLDT 71 Query: 426 GKEYVCIAR 452 K YV A+ Sbjct: 72 DKTYVVRAK 80
>TRUB_PARUW (Q6MD66) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 262 Score = 47.4 bits (111), Expect = 2e-05 Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 1/69 (1%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDR-ATRLVKSQQG 422 G++ ++KP +S +V +++ L V+K GH+GTLDP TG +++ V R TRL Sbjct: 42 GILLINKPKGKTSFSLVRDLRKRLGVKKIGHAGTLDPFATGVMVMLVGRNYTRLSDQFLL 101 Query: 423 AGKEYVCIA 449 + KEY+ A Sbjct: 102 SDKEYIAEA 110
>TRUB_BACFR (Q650L8) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 233 Score = 47.0 bits (110), Expect = 2e-05 Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 6/70 (8%) Frame = +3 Query: 249 VINLDKPSNPSSHEVVAWIK----RLLRVEK--TGHSGTLDPKVTGNLIVCVDRATRLVK 410 V+ +KP +S +VV + R ++V+K GH+GTLDP TG +IVC +AT+ ++ Sbjct: 8 VLYFNKPLGWTSFKVVGHARYHMCRRMKVKKLKVGHAGTLDPLATGVMIVCTGKATKRIE 67 Query: 411 SQQGAGKEYV 440 Q KEYV Sbjct: 68 EFQYHTKEYV 77
>TRUB_BACFN (Q5LJ29) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 233 Score = 47.0 bits (110), Expect = 2e-05 Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 6/70 (8%) Frame = +3 Query: 249 VINLDKPSNPSSHEVVAWIK----RLLRVEK--TGHSGTLDPKVTGNLIVCVDRATRLVK 410 V+ +KP +S +VV + R ++V+K GH+GTLDP TG +IVC +AT+ ++ Sbjct: 8 VLYFNKPLGWTSFKVVGHARYHMCRRMKVKKLKVGHAGTLDPLATGVMIVCTGKATKRIE 67 Query: 411 SQQGAGKEYV 440 Q KEYV Sbjct: 68 EFQYHTKEYV 77
>TRUB_BARQU (Q6G0P4) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 270 Score = 47.0 bits (110), Expect = 2e-05 Identities = 25/64 (39%), Positives = 33/64 (51%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G + DKP S E V+ IK L +K GH+GTLDP +G L + + AT+ V Sbjct: 14 GWVIFDKPKGMRSTEAVSQIKWLFHAQKAGHAGTLDPLASGLLPIALGEATKTVPYVMQG 73 Query: 426 GKEY 437 K Y Sbjct: 74 TKTY 77
>TRUB_AGRT5 (Q8UJ53) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 315 Score = 47.0 bits (110), Expect = 2e-05 Identities = 29/76 (38%), Positives = 40/76 (52%) Frame = +3 Query: 210 PLKRPLAEYLRYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVD 389 P RP++ G + LDKP + S E V+ IK L +K GH+GTLDP +G L + + Sbjct: 12 PKGRPIS-----GWLILDKPLDFGSTEAVSKIKWLFNAQKAGHAGTLDPLASGMLPIALG 66 Query: 390 RATRLVKSQQGAGKEY 437 AT+ V K Y Sbjct: 67 DATKTVPYVMDGRKIY 82
>TRUB_MYCGA (P59879) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 218 Score = 47.0 bits (110), Expect = 2e-05 Identities = 21/64 (32%), Positives = 37/64 (57%) Frame = +3 Query: 249 VINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAG 428 ++ +DKP N SS + K+ ++K GH+GTLDP +G L+V ++ T+ + Sbjct: 11 IVIIDKPKNISSAFCLNLFKKRFNIKKAGHNGTLDPLASGVLVVATNKRTKELSQLNQDD 70 Query: 429 KEYV 440 K+Y+ Sbjct: 71 KQYL 74
>TRUB_GLUOX (Q5FQM1) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 333 Score = 46.6 bits (109), Expect = 3e-05 Identities = 24/64 (37%), Positives = 35/64 (54%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G + LDKP P+S ++V ++ +K GH GTLDP +G L + +ATR + A Sbjct: 11 GWLILDKPLGPTSTDMVNKLRWAFDAKKAGHGGTLDPLASGVLPIAFGKATRTIPYIMDA 70 Query: 426 GKEY 437 K Y Sbjct: 71 TKRY 74
>TRUB_RHOS4 (Q3IYU1) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 301 Score = 46.6 bits (109), Expect = 3e-05 Identities = 27/69 (39%), Positives = 38/69 (55%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 G + +DKP+ +S VV ++ L +K GH+GTLDP TG L V + AT+ V A Sbjct: 12 GWLVVDKPAGMTSTAVVNKVRWALEAQKAGHAGTLDPDATGVLAVALGEATKTVPYITDA 71 Query: 426 GKEYVCIAR 452 K Y + R Sbjct: 72 LKCYRFMVR 80
>TRUB_BACTN (Q8A2U2) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 240 Score = 46.6 bits (109), Expect = 3e-05 Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 6/74 (8%) Frame = +3 Query: 249 VINLDKPSNPSSHEVVAWIK----RLLRVEK--TGHSGTLDPKVTGNLIVCVDRATRLVK 410 V+ +KP +S +VV ++ R + V+K GH+GTLDP TG +I+C +AT+ ++ Sbjct: 8 VLFFNKPLGWTSFKVVGHVRYHICRRIGVKKLKVGHAGTLDPLATGVMILCTGKATKRIE 67 Query: 411 SQQGAGKEYVCIAR 452 Q KEYV R Sbjct: 68 EFQYHTKEYVATLR 81
>TRUB_CHLCH (Q3AQK9) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 255 Score = 46.2 bits (108), Expect = 4e-05 Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 4/64 (6%) Frame = +3 Query: 258 LDKPSNPSSHEVVAWIKRLLRV----EKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 +DKP + +S +VVA ++ R K GH GTLDPK TG LIV R T+ + + Sbjct: 23 IDKPLDWTSFDVVAKVRNTYRKCGSKRKVGHCGTLDPKATGLLIVATGRKTKEISQLEQL 82 Query: 426 GKEY 437 K Y Sbjct: 83 DKVY 86
>TRUB_RICCN (Q92HV5) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 345 Score = 45.8 bits (107), Expect = 5e-05 Identities = 24/63 (38%), Positives = 37/63 (58%) Frame = +3 Query: 252 INLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAGK 431 +N+ KP SS ++V+ +K++L K GH+GTLD + G L V AT+L+ A K Sbjct: 6 LNIYKPRGISSAQLVSIVKKILGKTKIGHAGTLDVEAEGILPFAVGEATKLIHLLVDARK 65 Query: 432 EYV 440 Y+ Sbjct: 66 TYI 68
>TRUB_CHLTE (Q8KFS9) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 240 Score = 45.8 bits (107), Expect = 5e-05 Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 4/64 (6%) Frame = +3 Query: 258 LDKPSNPSSHEVVAWI----KRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 +DKP + +S +VVA I KR K GH GTLDPK TG LI+ R T+ + S + Sbjct: 19 VDKPLDWTSFDVVAKIRGAYKRNGAKRKVGHCGTLDPKATGLLILATGRKTKTISSLELL 78 Query: 426 GKEY 437 K Y Sbjct: 79 DKAY 82
>TRUB_RICFE (Q4ULJ9) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 356 Score = 45.4 bits (106), Expect = 7e-05 Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%) Frame = +3 Query: 252 INLDKPSNPSSHEVVAWIKRLLRVE-KTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAG 428 +N+ KP SS ++V+ +K++L E K GH+GTLD + G L + V AT+L++ A Sbjct: 23 LNIYKPRGISSAKLVSMVKKILGKEVKVGHAGTLDVEAEGILPLAVGEATKLIQLLIDAK 82 Query: 429 KEYV 440 K Y+ Sbjct: 83 KTYI 86
>TRUB_THIDA (Q3SKX3) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 298 Score = 45.4 bits (106), Expect = 7e-05 Identities = 26/67 (38%), Positives = 35/67 (52%) Frame = +3 Query: 246 GVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGA 425 GV+ L+KP +S+ + K LL +K GH+GTLDP G L +C AT+ A Sbjct: 10 GVLLLNKPVGITSNAALQKAKWLLNAKKAGHTGTLDPFADGLLPLCFGEATKFSAYLLDA 69 Query: 426 GKEYVCI 446 K Y I Sbjct: 70 DKRYRAI 76
>TRUB_MYCMO (Q6KHH8) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 287 Score = 45.4 bits (106), Expect = 7e-05 Identities = 26/68 (38%), Positives = 34/68 (50%) Frame = +3 Query: 249 VINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAG 428 ++ L K N SS + K+ +K GH GTLDP TG LIV D T+L+ Sbjct: 4 ILLLRKTKNISSFNFINNFKKTKGFKKIGHCGTLDPLATGLLIVATDEDTKLIDYLDQKD 63 Query: 429 KEYVCIAR 452 K YV A+ Sbjct: 64 KTYVARAK 71
>RAA2_CHLRE (Q9SMH4) Trans-splicing factor Raa2, chloroplast precursor| Length = 410 Score = 44.3 bits (103), Expect = 1e-04 Identities = 24/69 (34%), Positives = 36/69 (52%) Frame = +3 Query: 231 EYLRYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVK 410 E L GV+ +DKP + EVVA ++R +K LD + +G +++C ATRL Sbjct: 131 EVLANGVLLVDKPPHWEVPEVVAAVQRATGADKVASVAPLDARASGLMLLCFGSATRLAP 190 Query: 411 SQQGAGKEY 437 + A K Y Sbjct: 191 RVERAAKRY 199
>TRUB_RHORT (Q2RMR8) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 308 Score = 44.3 bits (103), Expect = 1e-04 Identities = 23/65 (35%), Positives = 34/65 (52%) Frame = +3 Query: 243 YGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQG 422 +G + +DKP +S +VV ++R + K GH GTLDP +G L + AT+ V Sbjct: 11 HGWLAIDKPVGITSTDVVNRLRRTMDAAKVGHGGTLDPLASGVLPIAFGEATKTVSYVMD 70 Query: 423 AGKEY 437 K Y Sbjct: 71 GTKVY 75
>TRUB_RICTY (Q68WN3) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 292 Score = 44.3 bits (103), Expect = 1e-04 Identities = 23/63 (36%), Positives = 37/63 (58%) Frame = +3 Query: 252 INLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAGK 431 +N KP SS ++V +K+++ K GH+GTLD + G L + V AT+L++ A K Sbjct: 6 LNFYKPKGISSAKLVNIVKKIIGKTKIGHAGTLDVEAEGILPLAVGEATKLIQLLIDAKK 65 Query: 432 EYV 440 Y+ Sbjct: 66 TYI 68
>TRUB_RICPR (Q9ZD46) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 172 Score = 43.9 bits (102), Expect = 2e-04 Identities = 23/63 (36%), Positives = 37/63 (58%) Frame = +3 Query: 252 INLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAGK 431 +N KP SS ++V +K+++ K GH+GTLD + G L + V AT+L++ A K Sbjct: 6 LNFYKPRGISSAKLVNIVKKIIGKTKIGHAGTLDVEAEGILPLAVGEATKLIQLLIDARK 65 Query: 432 EYV 440 Y+ Sbjct: 66 TYI 68 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,335,392 Number of Sequences: 219361 Number of extensions: 1069546 Number of successful extensions: 4419 Number of sequences better than 10.0: 303 Number of HSP's better than 10.0 without gapping: 4002 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4321 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
