ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast50a10 |
|---|---|
| Clone Library Name | barley_pub |
>ZRF1_HUMAN (Q99543) Zuotin-related factor 1 (M-phase phosphoprotein 11)| Length = 568 Score = 47.8 bits (112), Expect = 1e-05 Identities = 19/46 (41%), Positives = 28/46 (60%) Frame = +2 Query: 170 WSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHYDDL 307 W+ E KL E+AL + P+RWE++A +PG+T D M Y +L Sbjct: 501 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKEL 546
>YMA9_CAEEL (P34454) Hypothetical protein F54F2.9| Length = 299 Score = 40.4 bits (93), Expect = 0.002 Identities = 24/87 (27%), Positives = 39/87 (44%) Frame = +2 Query: 47 LVGLAEMMKQESWMEVLPVPPAPYFAGQAGGWFLQDQRGGAWSPAENKLFEEALARVDCD 226 + G + MKQE + ++L ++++ WS AE K FE AL + Sbjct: 208 MAGKMKQMKQEDYTKLLMTTIQQSVP-------VEEKSEDDWSQAEQKAFETALQKYPKG 260 Query: 227 APDRWERVASLLPGKTVADVMTHYDDL 307 +RWER++ + KT VM + L Sbjct: 261 TDERWERISEEIGSKTKKQVMVRFKQL 287
>DNJC1_MOUSE (Q61712) DnaJ homolog subfamily C member 1 (DnaJ protein homolog| MTJ1) Length = 552 Score = 39.3 bits (90), Expect = 0.004 Identities = 16/44 (36%), Positives = 26/44 (59%) Frame = +2 Query: 167 AWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHY 298 AW+ ++ KL E AL + A DRW+++A +P K+ D + Y Sbjct: 494 AWTQSQQKLLELALQQYPKGASDRWDKIAKCVPSKSKEDCIARY 537
>DNJC1_HUMAN (Q96KC8) DnaJ homolog subfamily C member 1| Length = 554 Score = 35.0 bits (79), Expect = 0.072 Identities = 14/43 (32%), Positives = 24/43 (55%) Frame = +2 Query: 170 WSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHY 298 W+ + KL E AL + + DRW+++A +P K+ D + Y Sbjct: 497 WTQNQQKLLELALQQYPRGSSDRWDKIARCVPSKSKEDCIARY 539
>MYBA_CHICK (P52550) Myb-related protein A (A-Myb)| Length = 757 Score = 34.3 bits (77), Expect = 0.12 Identities = 15/45 (33%), Positives = 27/45 (60%) Frame = +2 Query: 167 AWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHYD 301 +W+ AE+++ EA R+ +RW +A LLPG+T + H++ Sbjct: 141 SWTEAEDRVIYEAHKRLG----NRWAEIAKLLPGRTDNSIKNHWN 181
>GCSP_TROWT (Q83GV1) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)| (Glycine decarboxylase) (Glycine cleavage system P-protein) Length = 968 Score = 33.5 bits (75), Expect = 0.21 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%) Frame = +2 Query: 170 WSPAENKL---FEEALARVDCDAPDRWERVASLLPGKTVADVMTHYDDLE 310 W +NKL F+E AR+D D P+R +V + P K + D+ +YD + Sbjct: 396 WKVDDNKLRITFDEVTARLDGDLPERLSKVFGISPDK-IRDLGCNYDSCD 444
>GCSP_TROW8 (Q83IA7) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)| (Glycine decarboxylase) (Glycine cleavage system P-protein) Length = 968 Score = 33.5 bits (75), Expect = 0.21 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%) Frame = +2 Query: 170 WSPAENKL---FEEALARVDCDAPDRWERVASLLPGKTVADVMTHYDDLE 310 W +NKL F+E AR+D D P+R +V + P K + D+ +YD + Sbjct: 396 WKVDDNKLRITFDEVTARLDGDLPERLSKVFGISPDK-IRDLGCNYDSCD 444
>CEF1_ASHGO (Q756C3) Pre-mRNA-splicing factor CEF1| Length = 477 Score = 33.5 bits (75), Expect = 0.21 Identities = 16/39 (41%), Positives = 23/39 (58%) Frame = +2 Query: 158 RGGAWSPAENKLFEEALARVDCDAPDRWERVASLLPGKT 274 +GG WS E+++ A+ R A W +VASLLP K+ Sbjct: 9 KGGVWSTVEDEILRAAVQRYGTHA---WNKVASLLPRKS 44
>MYB_AVIMB (P01104) Transforming protein Myb| Length = 382 Score = 32.7 bits (73), Expect = 0.36 Identities = 19/73 (26%), Positives = 36/73 (49%) Frame = +2 Query: 167 AWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHYDDLENDVCFIEAGLVP 346 +W+ E+++ +A R+ +RW +A LLPG+T V H+ N + Sbjct: 75 SWTEEEDRIIYQAHKRLG----NRWAEIAKLLPGRTDNAVKNHW----NSTMRRKVEQEG 126 Query: 347 FPHYNANAGSPAS 385 +P ++ AG P++ Sbjct: 127 YPQESSKAGPPSA 139
>MYBA_MOUSE (P51960) Myb-related protein A (A-Myb)| Length = 751 Score = 32.7 bits (73), Expect = 0.36 Identities = 14/45 (31%), Positives = 26/45 (57%) Frame = +2 Query: 167 AWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHYD 301 +W+ E+++ EA R+ +RW +A LLPG+T + H++ Sbjct: 141 SWTEEEDRIIYEAHKRLG----NRWAEIAKLLPGRTDNSIKNHWN 181
>MYBA_HUMAN (P10243) Myb-related protein A (A-Myb)| Length = 752 Score = 32.7 bits (73), Expect = 0.36 Identities = 14/45 (31%), Positives = 26/45 (57%) Frame = +2 Query: 167 AWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHYD 301 +W+ E+++ EA R+ +RW +A LLPG+T + H++ Sbjct: 141 SWTEEEDRIIYEAHKRLG----NRWAEIAKLLPGRTDNSIKNHWN 181
>CEF1_CANAL (Q5APG6) Pre-mRNA-splicing factor CEF1| Length = 610 Score = 32.7 bits (73), Expect = 0.36 Identities = 14/47 (29%), Positives = 27/47 (57%) Frame = +2 Query: 158 RGGAWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHY 298 +GG W+ E+++ + A+ + +WER++SLLP K+ V + Sbjct: 8 KGGVWTNVEDEILKAAIQKYGIY---QWERISSLLPKKSAKQVKARW 51
>MYBA_XENLA (Q05935) Myb-related protein A (A-Myb) (XAMYB) (MYB-related protein| 2) (XMYB2) Length = 728 Score = 32.3 bits (72), Expect = 0.47 Identities = 14/50 (28%), Positives = 27/50 (54%) Frame = +2 Query: 152 DQRGGAWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHYD 301 D + +W+ E+++ A R+ +RW +A LLPG+T + H++ Sbjct: 135 DVKKSSWTEEEDRIIYSAHKRMG----NRWAEIAKLLPGRTDNSIKNHWN 180
>ODO1_PETHY (Q50EX6) ODORANT1 protein (MYB-like protein ODO1)| Length = 294 Score = 32.3 bits (72), Expect = 0.47 Identities = 16/50 (32%), Positives = 29/50 (58%) Frame = +2 Query: 152 DQRGGAWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHYD 301 D + G S AE KL + +R+ +RW ++A+ LPG+T ++ H++ Sbjct: 64 DLKRGLLSDAEEKLVIDLHSRLG----NRWSKIAARLPGRTDNEIKNHWN 109
>SAHH_COREF (Q8FRJ4) Adenosylhomocysteinase (EC 3.3.1.1)| (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) Length = 478 Score = 32.0 bits (71), Expect = 0.61 Identities = 21/62 (33%), Positives = 29/62 (46%) Frame = +2 Query: 206 LARVDCDAPDRWERVASLLPGKTVADVMTHYDDLENDVCFIEAGLVPFPHYNANAGSPAS 385 L V + PD+W R+A + G T + T L + F E G++PFP N N S Sbjct: 177 LREVLAEEPDKWTRLADSIKGVT-EETTTGVHRLYH---FAEEGVLPFPAMNVNDAVTKS 232 Query: 386 GF 391 F Sbjct: 233 KF 234
>CEF1_DEBHA (Q6BLT3) Pre-mRNA-splicing factor CEF1| Length = 668 Score = 31.2 bits (69), Expect = 1.0 Identities = 14/52 (26%), Positives = 29/52 (55%) Frame = +2 Query: 158 RGGAWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHYDDLEN 313 +GG W+ E+++ + A+++ + +W RVASLL K+ +++ N Sbjct: 7 KGGVWTNVEDEILKAAVSKYGLN---QWSRVASLLAKKSAKQAKARWNEWLN 55
>MYB_CHICK (P01103) Myb proto-oncogene protein (C-myb)| Length = 641 Score = 30.8 bits (68), Expect = 1.4 Identities = 13/45 (28%), Positives = 26/45 (57%) Frame = +2 Query: 167 AWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHYD 301 +W+ E+++ +A R+ +RW +A LLPG+T + H++ Sbjct: 146 SWTEEEDRIIYQAHKRLG----NRWAEIAKLLPGRTDNAIKNHWN 186
>MYB_MOUSE (P06876) Myb proto-oncogene protein (C-myb)| Length = 636 Score = 30.8 bits (68), Expect = 1.4 Identities = 13/45 (28%), Positives = 26/45 (57%) Frame = +2 Query: 167 AWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHYD 301 +W+ E+++ +A R+ +RW +A LLPG+T + H++ Sbjct: 146 SWTEEEDRIIYQAHKRLG----NRWAEIAKLLPGRTDNAIKNHWN 186
>HGFA_CANFA (Q6QNF4) Hepatocyte growth factor activator precursor (EC 3.4.21.-)| (HGF activator) (HGFA) [Contains: Hepatocyte growth factor activator short chain; Hepatocyte growth factor activator long chain] Length = 654 Score = 30.8 bits (68), Expect = 1.4 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 3/84 (3%) Frame = +2 Query: 95 LPVPPAPYFAG---QAGGWFLQDQRGGAWSPAENKLFEEALARVDCDAPDRWERVASLLP 265 LP P +P+ AG Q GW QD+ +S + + +A C +P+ + A + P Sbjct: 521 LPEPSSPFPAGHKCQIAGWGHQDENVSGYSSSLREALVPLVADHKCSSPEVYG--ADISP 578 Query: 266 GKTVADVMTHYDDLENDVCFIEAG 337 A Y D ++D C ++G Sbjct: 579 NMLCAG----YFDCKSDACQGDSG 598
>MYB_HUMAN (P10242) Myb proto-oncogene protein (C-myb)| Length = 640 Score = 30.8 bits (68), Expect = 1.4 Identities = 13/45 (28%), Positives = 26/45 (57%) Frame = +2 Query: 167 AWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHYD 301 +W+ E+++ +A R+ +RW +A LLPG+T + H++ Sbjct: 146 SWTEEEDRIIYQAHKRLG----NRWAEIAKLLPGRTDNAIKNHWN 186
>MYB_BOVIN (P46200) Myb proto-oncogene protein (C-myb)| Length = 640 Score = 30.8 bits (68), Expect = 1.4 Identities = 13/45 (28%), Positives = 26/45 (57%) Frame = +2 Query: 167 AWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHYD 301 +W+ E+++ +A R+ +RW +A LLPG+T + H++ Sbjct: 146 SWTEEEDRIIYQAHKRLG----NRWAEIAKLLPGRTDNAIKNHWN 186
>MYB_XENLA (Q08759) Myb protein| Length = 624 Score = 30.8 bits (68), Expect = 1.4 Identities = 14/45 (31%), Positives = 25/45 (55%) Frame = +2 Query: 167 AWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHYD 301 +W+ E++ EA R+ +RW +A LLPG+T + H++ Sbjct: 143 SWTEEEDRTIYEAHKRLG----NRWAEIAKLLPGRTDNAIKNHWN 183
>CEF1_SCHPO (P39964) Pre-mRNA-splicing factor cef1 (Cell division control| protein 5) Length = 757 Score = 30.4 bits (67), Expect = 1.8 Identities = 13/39 (33%), Positives = 25/39 (64%) Frame = +2 Query: 158 RGGAWSPAENKLFEEALARVDCDAPDRWERVASLLPGKT 274 +GGAW E+++ + A+++ ++W R++SLL KT Sbjct: 5 KGGAWKNTEDEILKAAVSKY---GKNQWARISSLLVRKT 40
>CEF1_YEAST (Q03654) Pre-mRNA-splicing factor CEF1 (PRP19-associated complex| protein 85) (PRP nineteen-associated complex protein 85) Length = 590 Score = 30.0 bits (66), Expect = 2.3 Identities = 17/71 (23%), Positives = 32/71 (45%) Frame = +2 Query: 101 VPPAPYFAGQAGGWFLQDQRGGAWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVA 280 +PP P + +GG W+ E+++ + A+ + +W +VASLL KT Sbjct: 1 MPPVPIYV-----------KGGVWTNVEDQILKAAVQKY---GTHQWSKVASLLQKKTAR 46 Query: 281 DVMTHYDDLEN 313 +++ N Sbjct: 47 QSELRWNEYLN 57
>MYBA2_ORYSA (Q4JL76) Myb-related protein MYBAS2| Length = 242 Score = 29.6 bits (65), Expect = 3.0 Identities = 16/45 (35%), Positives = 24/45 (53%) Frame = +2 Query: 164 GAWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHY 298 G SP E +L E AR +RW R+A LPG+T ++ ++ Sbjct: 64 GRMSPHEERLILELHARWG----NRWSRIARRLPGRTDNEIKNYW 104
>SC5A2_RABIT (P26430) Sodium/nucleoside cotransporter (Na(+)/nucleoside| cotransporter) Length = 672 Score = 29.6 bits (65), Expect = 3.0 Identities = 21/57 (36%), Positives = 23/57 (40%), Gaps = 3/57 (5%) Frame = +2 Query: 98 PVPPAPYFAGQAGGWFLQDQRGGAWSPAENKLFEEALAR---VDCDAPDRWERVASL 259 P P P Q WF RG A PA EEA A D + RW RV +L Sbjct: 599 PQAPGPGLFRQCLLWFCGMNRGRAGGPAPPTQEEEAAAARRLEDINEDPRWSRVVNL 655
>MYB2_PHYPA (P80073) Myb-related protein Pp2| Length = 421 Score = 29.6 bits (65), Expect = 3.0 Identities = 15/50 (30%), Positives = 28/50 (56%) Frame = +2 Query: 152 DQRGGAWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHYD 301 D + G +S AE L + A + +RW R+A+ LPG+T ++ +++ Sbjct: 64 DLKRGIFSEAEENLILDLHATLG----NRWSRIAAQLPGRTDNEIKNYWN 109
>CEF1_KLULA (Q6CU65) Pre-mRNA-splicing factor CEF1| Length = 543 Score = 29.6 bits (65), Expect = 3.0 Identities = 14/52 (26%), Positives = 27/52 (51%) Frame = +2 Query: 158 RGGAWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHYDDLEN 313 +GG W+ E+++ + A+ + A W +VASLL K + +++ N Sbjct: 9 KGGIWTNLEDQILKAAVQKYGTHA---WSKVASLLQKKNARQCQSRWNEFLN 57
>MYB98_ARATH (Q9S7L2) Transcription factor MYB98 (Myb-related protein 98)| (AtMYB98) Length = 427 Score = 29.3 bits (64), Expect = 3.9 Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 3/89 (3%) Frame = +2 Query: 44 ILVGLAEMMKQESWMEVLPVPPAPYFAGQAGGW---FLQDQRGGAWSPAENKLFEEALAR 214 +L+ L E W + V P W D + WS E+++ E Sbjct: 227 VLIQLVEKYGLRKWSHIAQVLPGRIGKQCRERWHNHLRPDIKKETWSEEEDRVLIEFHKE 286 Query: 215 VDCDAPDRWERVASLLPGKTVADVMTHYD 301 + ++W +A LPG+T + H++ Sbjct: 287 IG----NKWAEIAKRLPGRTENSIKNHWN 311
>MYBA1_ORYSA (Q53NK6) Myb-related protein MYBAS1| Length = 237 Score = 28.9 bits (63), Expect = 5.2 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = +2 Query: 164 GAWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHY 298 G SP E L E AR +RW R+A LPG+T ++ ++ Sbjct: 64 GRMSPKEEHLIIELHARWG----NRWSRIARRLPGRTDNEIKNYW 104
>MYBB_CHICK (Q03237) Myb-related protein B (B-Myb)| Length = 686 Score = 28.9 bits (63), Expect = 5.2 Identities = 14/45 (31%), Positives = 25/45 (55%) Frame = +2 Query: 167 AWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHYD 301 +W+ E+++ EA + +RW +A LLPG+T V H++ Sbjct: 137 SWTEEEDRIIFEAHKVLG----NRWAEIAKLLPGRTDNAVKNHWN 177
>SYC2_MYCLE (Q49784) Putative cysteinyl-tRNA synthetase 2 (EC 6.1.1.16)| (Cysteine--tRNA ligase 2) (CysRS 2) Length = 412 Score = 28.5 bits (62), Expect = 6.7 Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 5/74 (6%) Frame = +2 Query: 104 PPAPYFAGQAGGWFLQDQRGGAWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVAD 283 PP+ G G + D+ WS ++L ++A+AR+ RW AS+ G VAD Sbjct: 309 PPSAIRLGLLAGHYRADR---FWS---SQLLDDAIARLH-----RWRTAASMPAGPDVAD 357 Query: 284 VMTHY-----DDLE 310 V+ DDL+ Sbjct: 358 VIARVRGYLADDLD 371
>MTA1_RAT (Q62599) Metastasis-associated protein MTA1| Length = 703 Score = 28.5 bits (62), Expect = 6.7 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +2 Query: 170 WSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHY 298 WS +E LFEEAL + D D + LP K++ ++ +Y Sbjct: 288 WSASEANLFEEALEKYGKDFTDIQQ---DFLPWKSLTSIIEYY 327
>TPS3_YEAST (P38426) Trehalose synthase complex regulatory subunit TPS3| (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 115 kDa subunit) Length = 1054 Score = 28.5 bits (62), Expect = 6.7 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 4/71 (5%) Frame = +2 Query: 188 KLFEEALARVDCD----APDRWERVASLLPGKTVADVMTHYDDLENDVCFIEAGLVPFPH 355 KL E ++ +VDC+ + ++ ER +S V +HY L EA + P Sbjct: 27 KLVESSMIKVDCNNQELSNNKQERSSS------VTSASSHYIGLPQ-----EAQINGEPL 75 Query: 356 YNANAGSPASG 388 AN GSPA+G Sbjct: 76 QRANVGSPATG 86
>MTA1_MOUSE (Q8K4B0) Metastasis-associated protein MTA1| Length = 715 Score = 28.5 bits (62), Expect = 6.7 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +2 Query: 170 WSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHY 298 WS +E LFEEAL + D D + LP K++ ++ +Y Sbjct: 288 WSASEANLFEEALEKYGKDFTDIQQ---DFLPWKSLTSIIEYY 327
>MTA1_HUMAN (Q13330) Metastasis-associated protein MTA1| Length = 715 Score = 28.5 bits (62), Expect = 6.7 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +2 Query: 170 WSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHY 298 WS +E LFEEAL + D D + LP K++ ++ +Y Sbjct: 288 WSASEANLFEEALEKYGKDFTDIQQ---DFLPWKSLTSIIEYY 327
>SAHH_CORGL (Q8NSC4) Adenosylhomocysteinase (EC 3.3.1.1)| (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) Length = 474 Score = 28.1 bits (61), Expect = 8.8 Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 6/85 (7%) Frame = +2 Query: 155 QRGGAWSPAENKLFEEALA------RVDCDAPDRWERVASLLPGKTVADVMTHYDDLEND 316 ++ G PAE +E +A V P +W ++A + G T + T L + Sbjct: 150 EQAGLVPPAEANDSDEYIAFLGMLREVLAAEPGKWGKIAEAVKGVT-EETTTGVHRLYH- 207 Query: 317 VCFIEAGLVPFPHYNANAGSPASGF 391 F E G++PFP N N S F Sbjct: 208 --FAEEGVLPFPAMNVNDAVTKSKF 230 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.312 0.137 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,972,009 Number of Sequences: 219361 Number of extensions: 535674 Number of successful extensions: 1284 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 1258 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1282 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)
