| Clone Name | bast50a09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY596584.1| Saccharum officinarum clone SCCCRZ1003F10, complete sequence Length = 2010 Score = 367 bits (185), Expect = 2e-98 Identities = 262/285 (91%), Gaps = 2/285 (0%) Strand = Plus / Minus Query: 210 cgggggcggggagctgatcgggtacgtggacgtgcacgtgcggagcgcgcgggacattca 269 |||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||| || Sbjct: 1589 cgggggcgcggagctgatcggctacgtcgacgtgcacgtgcggagcgcgcgggacatcca 1530 Query: 270 gaacatctgcatctaccacaagcaggatgtgtacgcgcgcctgtcgctgccgggggaggg 329 ||||||||||||||||||||||||||| |||||||| || || |||||||||||||| || Sbjct: 1529 gaacatctgcatctaccacaagcaggacgtgtacgcacggctctcgctgccgggggacgg 1470 Query: 330 cgcgccggcggcctccacgcaggtaatcaatggcggaggccgcaacccggtgtttgacca 389 |||||||||||| ||||||||||| |||| ||||| ||||||||||||||||| ||||| Sbjct: 1469 cgcgccggcggcgtccacgcaggtggtcaacggcgggggccgcaacccggtgttcgacca 1410 Query: 390 gtcggtgcgcgtcggcgtgcgcgcggtggacgtcgacgccgcgctccgctgcgaggtctg 449 |||| ||||| ||||||||||| ||| |||||||||||||||||||||||||||||| || Sbjct: 1409 gtcgctgcgcctcggcgtgcgctcgggggacgtcgacgccgcgctccgctgcgaggtgtg 1350 Query: 450 gatgctcagccgggtcaagaa-tacctgca-gaccagctgctggg 492 ||||||||||||||||||||| ||| |||| |||||||||||||| Sbjct: 1349 gatgctcagccgggtcaagaactacatgcaggaccagctgctggg 1305
>ref|NM_186999.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1689 Score = 343 bits (173), Expect = 3e-91 Identities = 256/281 (91%), Gaps = 2/281 (0%) Strand = Plus / Plus Query: 214 ggcggggagctgatcgggtacgtggacgtgcacgtgcggagcgcgcgggacattcagaac 273 ||||| ||||||||||||||||| ||||||||||||| ||||||||||||||| |||||| Sbjct: 216 ggcggcgagctgatcgggtacgtcgacgtgcacgtgcagagcgcgcgggacatccagaac 275 Query: 274 atctgcatctaccacaagcaggatgtgtacgcgcgcctgtcgctgccgggggagggcgcg 333 ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||| Sbjct: 276 atctgcatctaccacaagcaggacgtgtacgcgcggctgtcgctgccgggggagggggcg 335 Query: 334 ccggcggcctccacgcaggtaatcaatggcggaggccgcaacccggtgtttgaccagtcg 393 |||||||| || |||||||| ||||| ||||| || |||||||||||||| ||||||||| Sbjct: 336 ccggcggcgtcgacgcaggtcatcaacggcggggggcgcaacccggtgttcgaccagtcg 395 Query: 394 gtgcgcgtcggcgtgcgcgcggtggacgtcgacgccgcgctccgctgcgaggtctggatg 453 ||||| | ||||||||||| | ||||||||||| ||||||||| |||||||| |||||| Sbjct: 396 ctgcgcctgggcgtgcgcgccggggacgtcgacggcgcgctccggtgcgaggtgtggatg 455 Query: 454 ctcagccgggtcaagaa-tacctgca-gaccagctgctggg 492 || |||||||||||||| |||||||| |||||||||||||| Sbjct: 456 ctgagccgggtcaagaactacctgcaggaccagctgctggg 496
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 343 bits (173), Expect = 3e-91 Identities = 256/281 (91%), Gaps = 2/281 (0%) Strand = Plus / Plus Query: 214 ggcggggagctgatcgggtacgtggacgtgcacgtgcggagcgcgcgggacattcagaac 273 ||||| ||||||||||||||||| ||||||||||||| ||||||||||||||| |||||| Sbjct: 23693612 ggcggcgagctgatcgggtacgtcgacgtgcacgtgcagagcgcgcgggacatccagaac 23693671 Query: 274 atctgcatctaccacaagcaggatgtgtacgcgcgcctgtcgctgccgggggagggcgcg 333 ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||| Sbjct: 23693672 atctgcatctaccacaagcaggacgtgtacgcgcggctgtcgctgccgggggagggggcg 23693731 Query: 334 ccggcggcctccacgcaggtaatcaatggcggaggccgcaacccggtgtttgaccagtcg 393 |||||||| || |||||||| ||||| ||||| || |||||||||||||| ||||||||| Sbjct: 23693732 ccggcggcgtcgacgcaggtcatcaacggcggggggcgcaacccggtgttcgaccagtcg 23693791 Query: 394 gtgcgcgtcggcgtgcgcgcggtggacgtcgacgccgcgctccgctgcgaggtctggatg 453 ||||| | ||||||||||| | ||||||||||| ||||||||| |||||||| |||||| Sbjct: 23693792 ctgcgcctgggcgtgcgcgccggggacgtcgacggcgcgctccggtgcgaggtgtggatg 23693851 Query: 454 ctcagccgggtcaagaa-tacctgca-gaccagctgctggg 492 || |||||||||||||| |||||||| |||||||||||||| Sbjct: 23693852 ctgagccgggtcaagaactacctgcaggaccagctgctggg 23693892
>dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1060_D03 Length = 102178 Score = 343 bits (173), Expect = 3e-91 Identities = 256/281 (91%), Gaps = 2/281 (0%) Strand = Plus / Plus Query: 214 ggcggggagctgatcgggtacgtggacgtgcacgtgcggagcgcgcgggacattcagaac 273 ||||| ||||||||||||||||| ||||||||||||| ||||||||||||||| |||||| Sbjct: 38226 ggcggcgagctgatcgggtacgtcgacgtgcacgtgcagagcgcgcgggacatccagaac 38285 Query: 274 atctgcatctaccacaagcaggatgtgtacgcgcgcctgtcgctgccgggggagggcgcg 333 ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||| Sbjct: 38286 atctgcatctaccacaagcaggacgtgtacgcgcggctgtcgctgccgggggagggggcg 38345 Query: 334 ccggcggcctccacgcaggtaatcaatggcggaggccgcaacccggtgtttgaccagtcg 393 |||||||| || |||||||| ||||| ||||| || |||||||||||||| ||||||||| Sbjct: 38346 ccggcggcgtcgacgcaggtcatcaacggcggggggcgcaacccggtgttcgaccagtcg 38405 Query: 394 gtgcgcgtcggcgtgcgcgcggtggacgtcgacgccgcgctccgctgcgaggtctggatg 453 ||||| | ||||||||||| | ||||||||||| ||||||||| |||||||| |||||| Sbjct: 38406 ctgcgcctgggcgtgcgcgccggggacgtcgacggcgcgctccggtgcgaggtgtggatg 38465 Query: 454 ctcagccgggtcaagaa-tacctgca-gaccagctgctggg 492 || |||||||||||||| |||||||| |||||||||||||| Sbjct: 38466 ctgagccgggtcaagaactacctgcaggaccagctgctggg 38506
>dbj|AK071269.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088L08, full insert sequence Length = 1690 Score = 335 bits (169), Expect = 8e-89 Identities = 255/281 (90%), Gaps = 2/281 (0%) Strand = Plus / Plus Query: 214 ggcggggagctgatcgggtacgtggacgtgcacgtgcggagcgcgcgggacattcagaac 273 ||||| ||||||||||||||||| ||||||||||||| ||||||||||||||| |||||| Sbjct: 217 ggcggcgagctgatcgggtacgtcgacgtgcacgtgcagagcgcgcgggacatccagaac 276 Query: 274 atctgcatctaccacaagcaggatgtgtacgcgcgcctgtcgctgccgggggagggcgcg 333 ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||| Sbjct: 277 atctgcatctaccacaagcaggacgtgtacgcgcggctgtcgctgccgggggagggggcg 336 Query: 334 ccggcggcctccacgcaggtaatcaatggcggaggccgcaacccggtgtttgaccagtcg 393 |||||||| || |||||||| ||||| ||||| || |||||||||||||| ||||||||| Sbjct: 337 ccggcggcgtcgacgcaggtcatcaacggcggggggcgcaacccggtgttcgaccagtcg 396 Query: 394 gtgcgcgtcggcgtgcgcgcggtggacgtcgacgccgcgctccgctgcgaggtctggatg 453 ||||| | ||||||||||| | |||||| |||| ||||||||| |||||||| |||||| Sbjct: 397 ctgcgcctgggcgtgcgcgccggggacgtagacggcgcgctccggtgcgaggtgtggatg 456 Query: 454 ctcagccgggtcaagaa-tacctgca-gaccagctgctggg 492 || |||||||||||||| |||||||| |||||||||||||| Sbjct: 457 ctgagccgggtcaagaactacctgcaggaccagctgctggg 497
>gb|AY107407.1| Zea mays PCO113924 mRNA sequence Length = 773 Score = 107 bits (54), Expect = 3e-20 Identities = 80/86 (93%), Gaps = 2/86 (2%) Strand = Plus / Plus Query: 409 cgcgcggtggacgtcgacgccgcgctccgctgcgaggtctggatgctcagccgggtcaag 468 ||||||| |||||||||||||||| |||| ||||||||||||||||||||||| |||||| Sbjct: 1 cgcgcgggggacgtcgacgccgcgatccggtgcgaggtctggatgctcagccgcgtcaag 60 Query: 469 aa-tacctgca-gaccagctgctggg 492 || |||||||| |||||||||||||| Sbjct: 61 aactacctgcaggaccagctgctggg 86
>ref|XM_470575.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1209 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 265 attcagaacatctgcatctaccacaagcaggatgt 299 ||||| ||||| ||||||||||||||||||||||| Sbjct: 151 attcacaacatatgcatctaccacaagcaggatgt 185
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 265 attcagaacatctgcatctaccacaagcaggatgt 299 ||||| ||||| ||||||||||||||||||||||| Sbjct: 4864063 attcacaacatatgcatctaccacaagcaggatgt 4864029
>gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0064E16, complete sequence Length = 159092 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 265 attcagaacatctgcatctaccacaagcaggatgt 299 ||||| ||||| ||||||||||||||||||||||| Sbjct: 131484 attcacaacatatgcatctaccacaagcaggatgt 131518
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 265 attcagaacatctgcatctaccacaagcaggatgt 299 ||||| ||||| ||||||||||||||||||||||| Sbjct: 4863278 attcacaacatatgcatctaccacaagcaggatgt 4863244
>dbj|AK073045.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033007C02, full insert sequence Length = 1557 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 265 attcagaacatctgcatctaccacaagcaggatgt 299 ||||| ||||| ||||||||||||||||||||||| Sbjct: 314 attcacaacatatgcatctaccacaagcaggatgt 348
>gb|AC109498.10| Mus musculus chromosome 5, clone RP23-22K24, complete sequence Length = 218246 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 76 acagaccagacacacacacagggacaca 103 ||||||||||||||||||||| |||||| Sbjct: 160884 acagaccagacacacacacagagacaca 160857
>gb|AC137079.9| Medicago truncatula clone mth2-27d17, complete sequence Length = 122392 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Minus Query: 260 gggacattcagaacatctgcatctaccacaagcaggatgt 299 |||||||||| || |||||||| ||||||||||| ||||| Sbjct: 104664 gggacattcataagatctgcatataccacaagcaagatgt 104625
>emb|CR936323.2| Medicago truncatula chromosome 5 clone mth2-155c8, COMPLETE SEQUENCE Length = 136527 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Plus Query: 260 gggacattcagaacatctgcatctaccacaagcaggatgt 299 |||||||||| || |||||||| ||||||||||| ||||| Sbjct: 133768 gggacattcataagatctgcatataccacaagcaagatgt 133807
>gb|AC122849.4| Mus musculus BAC clone RP23-167F18 from 13, complete sequence Length = 202768 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 85 acacacacacagggacacaggg 106 |||||||||||||||||||||| Sbjct: 200635 acacacacacagggacacaggg 200656
>emb|AL450307.18| Human DNA sequence from clone RP11-245K15 on chromosome 10, complete sequence Length = 159020 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 82 cagacacacacacagggacaca 103 |||||||||||||||||||||| Sbjct: 55232 cagacacacacacagggacaca 55211
>emb|AL358393.16| Human DNA sequence from clone RP11-540K16 on chromosome 1 Contains the 3' end of a novel gene (LOC284646) and a novel gene, complete sequence Length = 50175 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 82 cagacacacacacagggacaca 103 |||||||||||||||||||||| Sbjct: 26924 cagacacacacacagggacaca 26903
>gb|AC132949.4| Mus musculus BAC clone RP24-547H18 from chromosome 7, complete sequence Length = 206116 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 85 acacacacacagggacacaggg 106 |||||||||||||||||||||| Sbjct: 152980 acacacacacagggacacaggg 153001
>dbj|AB121692.1| Mus musculus peptidylarginine deiminase gene cluster (Padi2, Padi1, Padi23, Padi4, Padi6), complete cds Length = 240498 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 82 cagacacacacacagggacaca 103 |||||||||||||||||||||| Sbjct: 34773 cagacacacacacagggacaca 34752
>gb|AC146604.5| Mus musculus BAC clone RP23-306G1 from chromosome 13, complete sequence Length = 213725 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 85 acacacacacagggacacaggg 106 |||||||||||||||||||||| Sbjct: 28191 acacacacacagggacacaggg 28212
>emb|AJ340935.1|HSA340935 Homo sapiens genomic sequence surrounding NotI site, clone NL6-GJ17RS Length = 770 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 82 cagacacacacacagggacaca 103 |||||||||||||||||||||| Sbjct: 449 cagacacacacacagggacaca 470
>emb|AJ340850.1|HSA340850 Homo sapiens genomic sequence surrounding NotI site, clone NR1-DI21RS Length = 595 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 82 cagacacacacacagggacaca 103 |||||||||||||||||||||| Sbjct: 451 cagacacacacacagggacaca 472
>emb|AJ340123.1|HSA340123 Homo sapiens genomic sequence surrounding NotI site, clone NL6-AI8RS Length = 791 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 82 cagacacacacacagggacaca 103 |||||||||||||||||||||| Sbjct: 449 cagacacacacacagggacaca 470
>gb|AC122747.11| Mus musculus chromosome 9, clone RP23-217J11, complete sequence Length = 195755 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 82 cagacacacacacagggacaca 103 |||||||||||||||||||||| Sbjct: 39791 cagacacacacacagggacaca 39812
>emb|CT025547.17| Mouse DNA sequence from clone RP24-111B7 on chromosome 14, complete sequence Length = 178908 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 82 cagacacacacacagggacaca 103 |||||||||||||||||||||| Sbjct: 39622 cagacacacacacagggacaca 39643
>gb|AF037352.1|AF037352 Mus musculus T cell receptor gamma locus, TCR gamma 1 and gamma 3 gene clusters Length = 105726 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 85 acacacacacagggacacaggg 106 |||||||||||||||||||||| Sbjct: 60486 acacacacacagggacacaggg 60507
>gb|AY779573.1| Bubalus bubalis clone BBMS124 microsatellite sequence Length = 400 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 82 cagacacacacacagggacacaggg 106 ||||||||||||||| ||||||||| Sbjct: 55 cagacacacacacagagacacaggg 79
>gb|AC122922.4| Mus musculus BAC clone RP23-34M5 from chromosome 1, complete sequence Length = 223959 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 agacacacacacagggacaca 103 ||||||||||||||||||||| Sbjct: 185362 agacacacacacagggacaca 185382
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 396 gcgcgtcggcgtgcgcgcggt 416 ||||||||||||||||||||| Sbjct: 1098313 gcgcgtcggcgtgcgcgcggt 1098293
>gb|AC117671.8| Mus musculus chromosome 10, clone RP23-389G8, complete sequence Length = 189341 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 gacagaccagacacacacaca 95 ||||||||||||||||||||| Sbjct: 127903 gacagaccagacacacacaca 127883
>gb|AY180263.1| Stachybotrys kampalensis strain UAMH 7746 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 528 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 426 cgccgcgctccgctgcgaggt 446 ||||||||||||||||||||| Sbjct: 489 cgccgcgctccgctgcgaggt 469
>emb|AL772363.15| Human DNA sequence from clone RP11-974F22 on chromosome 9 Contains the 5' end of the CACNA1B gene for alpha 1B subunit of L type voltage-dependent calcium channel and two CpG islands, complete sequence Length = 121478 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 76 acagaccagacacacacacagggacacag 104 ||||| |||||||| |||||||||||||| Sbjct: 29611 acagaacagacacagacacagggacacag 29583
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 389 agtcggtgcgcgtcggcgtgc 409 ||||||||||||||||||||| Sbjct: 4036396 agtcggtgcgcgtcggcgtgc 4036416
>emb|AL050306.5|HSDJ475B7 Human DNA sequence from clone RP3-475B7 on chromosome Xq12.1-13 Contains a novel gene, gene FLJ12525 (FLJ40064, FLJ30255, FLJ00158), a novel pseudogene and two CpG islands, complete sequence Length = 78693 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 agacacacacacagggacaca 103 ||||||||||||||||||||| Sbjct: 25180 agacacacacacagggacaca 25200
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 396 gcgcgtcggcgtgcgcgcggt 416 ||||||||||||||||||||| Sbjct: 2415803 gcgcgtcggcgtgcgcgcggt 2415783
>gb|AE005793.1| Caulobacter crescentus CB15 section 119 of 359 of the complete genome Length = 13755 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 303 cgcgcgcctgtcgctgccggg 323 ||||||||||||||||||||| Sbjct: 8305 cgcgcgcctgtcgctgccggg 8325
>gb|AF333981.1|AF333981 Mus musculus opticin (Optc) gene, complete cds Length = 9969 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 75 gacagaccagacacacacacagggacaca 103 ||||||| |||||||||||||| |||||| Sbjct: 2402 gacagactagacacacacacagagacaca 2374
>gb|AC154636.2| Mus musculus BAC clone RP23-302E1 from chromosome 12, complete sequence Length = 179631 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 agacacacacacagggacaca 103 ||||||||||||||||||||| Sbjct: 36447 agacacacacacagggacaca 36467
>gb|AC157941.4| Mus musculus BAC clone RP24-253I2 from chromosome 3, complete sequence Length = 204323 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 85 acacacacacagggacacagggtaa 109 ||||||||||||| ||||||||||| Sbjct: 89172 acacacacacaggaacacagggtaa 89196
>gb|AC156562.3| Mus musculus BAC clone RP24-286J19 from chromosome 14, complete sequence Length = 149578 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 agacacacacacagggacaca 103 ||||||||||||||||||||| Sbjct: 125781 agacacacacacagggacaca 125761
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 396 gcgcgtcggcgtgcgcgcggt 416 ||||||||||||||||||||| Sbjct: 318682 gcgcgtcggcgtgcgcgcggt 318702
>gb|AF081477.2|AF081477 Stachybotrys kampalensis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 1476 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 426 cgccgcgctccgctgcgaggt 446 ||||||||||||||||||||| Sbjct: 819 cgccgcgctccgctgcgaggt 799
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 317 tgccgggggagggcgcgccggcggcctcc 345 |||||||| ||||||||||||||||||| Sbjct: 3018542 tgccggggccgggcgcgccggcggcctcc 3018570 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 cgctgccgggggagggcgcg 333 |||||||||||||||||||| Sbjct: 4494846 cgctgccgggggagggcgcg 4494827
>emb|AL928742.3|CNS08CBF Human chromosome 14 DNA sequence BAC R-731F5 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 176237 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 agacacacacacagggacaca 103 ||||||||||||||||||||| Sbjct: 81227 agacacacacacagggacaca 81247
>emb|AL929248.12| Mouse DNA sequence from clone RP23-354I18 on chromosome 2, complete sequence Length = 101990 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 gacagaccagacacacacaca 95 ||||||||||||||||||||| Sbjct: 28507 gacagaccagacacacacaca 28487
>gb|AC119809.10| Mus musculus chromosome 1, clone RP24-505E24, complete sequence Length = 154931 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 agacacacacacagggacaca 103 ||||||||||||||||||||| Sbjct: 87522 agacacacacacagggacaca 87502
>ref|NG_001019.4| Homo sapiens immunoglobulin heavy locus (IGH@) on chromosome 14 Length = 1279711 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 agacacacacacagggacaca 103 ||||||||||||||||||||| Sbjct: 1246728 agacacacacacagggacaca 1246748 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 agacacacacacagggacaca 103 ||||||||||||||||||||| Sbjct: 1127771 agacacacacacagggacaca 1127751
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 396 gcgcgtcggcgtgcgcgcggtggacgtcgacgccgcg 432 ||||| ||||||||||||| | |||||||||||||| Sbjct: 1517503 gcgcggcggcgtgcgcgcgccgcacgtcgacgccgcg 1517539 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 396 gcgcgtcggcgtgcgcgcggt 416 ||||||||||||||||||||| Sbjct: 719337 gcgcgtcggcgtgcgcgcggt 719357
>emb|CT572990.6| Mouse DNA sequence from clone RP24-393N9 on chromosome 12, complete sequence Length = 90243 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 agacacacacacagggacaca 103 ||||||||||||||||||||| Sbjct: 51802 agacacacacacagggacaca 51782
>gb|AC133170.2| Mus musculus BAC clone RP24-267K11 from 3, complete sequence Length = 158692 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 acacacacacagggacacagggtaa 109 ||||||||||||| ||||||||||| Sbjct: 148030 acacacacacaggaacacagggtaa 148006
>emb|AL731724.8| Mouse DNA sequence from clone RP23-1F19 on chromosome 2, complete sequence Length = 205917 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 ggtgctgctgcttcttctcaa 66 ||||||||||||||||||||| Sbjct: 140605 ggtgctgctgcttcttctcaa 140625
>emb|AL928767.1|CNS08CC3 Human chromosome 14 DNA sequence Partial sequence from library PCR product from genomic DNA from chromosome 14 of Homo sapiens (Human), complete sequence Length = 10804 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 agacacacacacagggacaca 103 ||||||||||||||||||||| Sbjct: 1542 agacacacacacagggacaca 1522
>ref|NM_119246.2| Arabidopsis thaliana DNA binding / transcription factor AT4G30980 mRNA, complete cds Length = 1179 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 tgctgctgcttcttctcaaatctc 71 |||| ||||||||||||||||||| Sbjct: 600 tgcttctgcttcttctcaaatctc 623
>gb|AC162379.2| Mus musculus BAC clone RP23-132A15 from chromosome 12, complete sequence Length = 238126 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 caggacagaccagacacacacaca 95 |||||||||||| ||||||||||| Sbjct: 226743 caggacagaccacacacacacaca 226720
>gb|AC164397.6| Mus musculus chromosome 1, clone RP23-276M15, complete sequence Length = 196086 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 accagacacacacacagggacaca 103 |||| ||||||||||||||||||| Sbjct: 39986 accacacacacacacagggacaca 40009
>gb|AC162799.4| Mus musculus BAC clone RP24-392E13 from chromosome 3, complete sequence Length = 177586 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 cagacacacacacagggacacagg 105 ||||||||||||||| |||||||| Sbjct: 166899 cagacacacacacagagacacagg 166876
>gb|AC107786.14| Mus musculus chromosome 5, clone RP23-5E3, complete sequence Length = 226673 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 tgctgctgcttcttctcaaa 67 |||||||||||||||||||| Sbjct: 21035 tgctgctgcttcttctcaaa 21054
>gb|AC157933.4| Mus musculus chromosome 5, clone RP24-189N4, complete sequence Length = 185286 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 tgctgctgcttcttctcaaa 67 |||||||||||||||||||| Sbjct: 47788 tgctgctgcttcttctcaaa 47769
>gb|AC158554.6| Mus musculus chromosome 15, clone RP23-353O17, complete sequence Length = 192019 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 cagacacacacacagggacacagg 105 ||||||||||||||| |||||||| Sbjct: 165745 cagacacacacacagagacacagg 165768
>ref|XM_609135.2| PREDICTED: Bos taurus similar to heparan sulfate D-glucosaminyl 3-O-sulfotransferase 2 (LOC530660), mRNA Length = 526 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ggggagggcgcgccggcggc 341 |||||||||||||||||||| Sbjct: 324 ggggagggcgcgccggcggc 305
>gb|AC163498.3| Mus musculus chromosome 1, clone RP23-86J11, complete sequence Length = 192061 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 gacacacacacagggacaca 103 |||||||||||||||||||| Sbjct: 45691 gacacacacacagggacaca 45672 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 gacacacacacagggacaca 103 |||||||||||||||||||| Sbjct: 45663 gacacacacacagggacaca 45644
>gb|AC154644.2| Mus musculus BAC clone RP23-278G20 from chromosome 14, complete sequence Length = 175685 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 gacacacacacagggacaca 103 |||||||||||||||||||| Sbjct: 118335 gacacacacacagggacaca 118316
>gb|AC102734.11| Mus musculus chromosome 6, clone RP24-222N4, complete sequence Length = 238453 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 acagaccagacacacacaca 95 |||||||||||||||||||| Sbjct: 90823 acagaccagacacacacaca 90804
>gb|AC137512.2| Mus musculus chromosome 12 clone RP24-323C12, complete sequence Length = 164776 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acacacacacagggacacag 104 |||||||||||||||||||| Sbjct: 7967 acacacacacagggacacag 7986
>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence Length = 3214944 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 ttccagtggtgctgctgcttcttc 62 |||||||||||||||| ||||||| Sbjct: 2424683 ttccagtggtgctgcttcttcttc 2424706
>gb|AC133172.4| Mus musculus BAC clone RP24-273H5 from chromosome 18, complete sequence Length = 206797 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 gacacacacacagggacaca 103 |||||||||||||||||||| Sbjct: 203204 gacacacacacagggacaca 203185
>gb|AC138225.11| Mus musculus chromosome 1, clone RP23-164F17, complete sequence Length = 239758 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 accagacacacacacagggacaca 103 |||| ||||||||||||||||||| Sbjct: 219078 accacacacacacacagggacaca 219055
>ref|XM_816642.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510359.130) partial mRNA Length = 2472 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acacacacacagggacacag 104 |||||||||||||||||||| Sbjct: 276 acacacacacagggacacag 295
>emb|Z81484.1|CEC47A10 Caenorhabditis elegans Cosmid C47A10, complete sequence Length = 46423 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gtcgacgccgcgctccgctg 440 |||||||||||||||||||| Sbjct: 34097 gtcgacgccgcgctccgctg 34116
>gb|AC125049.3| Mus musculus BAC clone RP23-367C15 from chromosome 9, complete sequence Length = 211511 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 cagacacacacacagggacacagg 105 |||||||||||||||| ||||||| Sbjct: 125487 cagacacacacacaggcacacagg 125464
>gb|AC123068.4| Mus musculus BAC clone RP23-21P10 from 1, complete sequence Length = 221464 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acacacacacagggacacag 104 |||||||||||||||||||| Sbjct: 72404 acacacacacagggacacag 72423
>gb|AC084162.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-11P12, complete sequence Length = 159180 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 acagaccagacacacacaca 95 |||||||||||||||||||| Sbjct: 54429 acagaccagacacacacaca 54448
>emb|BX842590.1| Rhesus DNA sequence from clone bRH-178N19, complete sequence Length = 114431 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 acagaccagacacacacaca 95 |||||||||||||||||||| Sbjct: 67147 acagaccagacacacacaca 67166
>gb|AC102692.6| Mus musculus chromosome 18, clone RP24-491K18, complete sequence Length = 225042 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 gacacacacacagggacaca 103 |||||||||||||||||||| Sbjct: 137410 gacacacacacagggacaca 137391
>gb|AC102105.8| Mus musculus chromosome 12, clone RP23-89G24, complete sequence Length = 188853 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 caggacagaccagacacacacaca 95 |||||||||||| ||||||||||| Sbjct: 175339 caggacagaccacacacacacaca 175362
>gb|AC025116.14| Mus musculus chromosome 1, clone RP23-124O19, complete sequence Length = 233298 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 gacacacacacagggacaca 103 |||||||||||||||||||| Sbjct: 86971 gacacacacacagggacaca 86990 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 gacacacacacagggacaca 103 |||||||||||||||||||| Sbjct: 86943 gacacacacacagggacaca 86962
>gb|AC161366.6| Mus musculus BAC clone RP24-230D17 from chromosome 9, complete sequence Length = 155733 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 gccgggggagggcgcgccgg 337 |||||||||||||||||||| Sbjct: 59005 gccgggggagggcgcgccgg 59024
>emb|AL645504.10| Human DNA sequence from clone RP11-90L20 on chromosome 1 Contains the 3' end of the NAV1 gene for neuron navigator 1, two novel genes and the 5' end of the IPO9 gene for importin 9, complete sequence Length = 201934 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 acacacacacagggacacag 104 |||||||||||||||||||| Sbjct: 125774 acacacacacagggacacag 125755
>ref|XM_505267.1| Yarrowia lipolytica CLIB122, YALI0F10945g predicted mRNA Length = 3894 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 448 tggatgctcagccgggtcaa 467 |||||||||||||||||||| Sbjct: 2060 tggatgctcagccgggtcaa 2041
>emb|AL353611.19| Human DNA sequence from clone RP11-447M12 on chromosome 9 Contains the FCN1 gene for ficolin (collagen/fibrinogen domain containing) 1 and a novel gene, complete sequence Length = 104972 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 cagaccagacacacacacag 96 |||||||||||||||||||| Sbjct: 41945 cagaccagacacacacacag 41964
>emb|AL079341.19|HSDJ319M7 Human DNA sequence from clone RP1-319M7 on chromosome 6p21.1-21.3 Contains the 5' end of the gene for a novel protein (contains KIAA1880 and FLJ32945), a TRK-fused gene (TFG) pseudogene and a CpG island, complete sequence Length = 128216 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 caggacagaccagacacacacaca 95 |||||||||||| ||||||||||| Sbjct: 72668 caggacagaccacacacacacaca 72645
>gb|AC112162.8| Mus Musculus chromosome 9 BAC clone MGS1-296M6 ES cell line, complete sequence Length = 116580 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 gccgggggagggcgcgccgg 337 |||||||||||||||||||| Sbjct: 32795 gccgggggagggcgcgccgg 32814
>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16 Length = 349008 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 gtgcgcgtcggcgtgcgcgc 413 |||||||||||||||||||| Sbjct: 329117 gtgcgcgtcggcgtgcgcgc 329136
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 gtgcgcgtcggcgtgcgcgc 413 |||||||||||||||||||| Sbjct: 236956 gtgcgcgtcggcgtgcgcgc 236975
>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12 Length = 347071 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 gtgcgcgtcggcgtgcgcgc 413 |||||||||||||||||||| Sbjct: 104227 gtgcgcgtcggcgtgcgcgc 104246
>ref|NM_001016995.2| Xenopus tropicalis guanine nucleotide binding protein, alpha o (gnao), mRNA Length = 2619 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cgctgctctctcctccgcgc 34 |||||||||||||||||||| Sbjct: 131 cgctgctctctcctccgcgc 112
>emb|AL161578.2|ATCHRIV74 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 74 Length = 194920 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 tgctgctgcttcttctcaaatctc 71 |||| ||||||||||||||||||| Sbjct: 36023 tgcttctgcttcttctcaaatctc 36000
>emb|AL022198.1|ATF6I18 Arabidopsis thaliana DNA chromosome 4, BAC clone F6I18 (ESSA project) Length = 122322 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 tgctgctgcttcttctcaaatctc 71 |||| ||||||||||||||||||| Sbjct: 41948 tgcttctgcttcttctcaaatctc 41971
>emb|AL954248.1| Pan troglodytes chromosome 22 clone PTB-061A04 map 22q22.3, complete sequence Length = 162730 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acacacacacagggacacag 104 |||||||||||||||||||| Sbjct: 45756 acacacacacagggacacag 45775
>gb|AC114495.2| Homo sapiens chromosome 1 clone RP11-490K7, complete sequence Length = 174903 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 accagacacacacacagggacaca 103 ||||||||||||||||| |||||| Sbjct: 135596 accagacacacacacagagacaca 135619
>gb|AY055726.2| Mus musculus synovial sarcoma associated SS18 (Ss18) gene, complete cds, alternatively spliced Length = 64533 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 gacacacacacagggacaca 103 |||||||||||||||||||| Sbjct: 14513 gacacacacacagggacaca 14494
>gb|AF488601.1| Arabidopsis thaliana clone bHLH069 putative bHLH transcription factor mRNA, complete cds Length = 1210 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 tgctgctgcttcttctcaaatctc 71 |||| ||||||||||||||||||| Sbjct: 600 tgcttctgcttcttctcaaatctc 623
>gb|AC158519.2| Mus musculus BAC clone RP24-87O4 from chromosome 14, complete sequence Length = 236374 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 ttccagtggtgctgctgctt 58 |||||||||||||||||||| Sbjct: 110931 ttccagtggtgctgctgctt 110912
>gb|AY573298.1| Uncultured gamma proteobacterium hypothetical protein, putative transport protein, putative transcriptional activation protein, and penicillin acylase genes, complete cds; and hypothetical protein gene, partial cds Length = 7019 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 ggcgtgcgcgcggtggacgt 422 |||||||||||||||||||| Sbjct: 6491 ggcgtgcgcgcggtggacgt 6510
>dbj|AK037354.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130010B02 product:hypothetical Cysteine-rich region profile/Leucine-rich region profile/Serine-rich region profile containing protein, full insert sequence Length = 3502 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 76 acagaccagacacacacacagggacaca 103 |||||||||||| ||||||||| ||||| Sbjct: 513 acagaccagacatacacacaggaacaca 486
>gb|AC093307.5| Homo sapiens chromosome 5 clone RP11-810C16, complete sequence Length = 176199 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 ccagacacacacacagggacacag 104 |||||||||||||||| ||||||| Sbjct: 143774 ccagacacacacacagtgacacag 143751
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 gcgcgtcggcgtgcgcgcgg 415 |||||||||||||||||||| Sbjct: 22950161 gcgcgtcggcgtgcgcgcgg 22950142
>gb|AC139676.3| Homo sapiens chromosome 8, clone RP13-648O9, complete sequence Length = 166153 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 gacacacacacagggacaca 103 |||||||||||||||||||| Sbjct: 24245 gacacacacacagggacaca 24226
>gb|AC011239.5| Homo sapiens BAC clone RP11-414D15 from 2, complete sequence Length = 189875 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 cagacacacacacagggacacagg 105 |||||||||||||||| ||||||| Sbjct: 90779 cagacacacacacaggcacacagg 90802
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 ggacgtcgacgccgcgctcc 436 |||||||||||||||||||| Sbjct: 5059182 ggacgtcgacgccgcgctcc 5059201
>gb|AC009951.10| Homo sapiens BAC clone RP11-107E5 from 2, complete sequence Length = 159791 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 acagaccagacacacacaca 95 |||||||||||||||||||| Sbjct: 115550 acagaccagacacacacaca 115569
>gb|AC079436.2| Rattus norvegicus strain Brown Norway chromosome 4 clone RP31-108L19, complete sequence Length = 174622 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 cagacacacacacagggacacagg 105 ||||||||||||||| |||||||| Sbjct: 165522 cagacacacacacagagacacagg 165499
>gb|AC087284.22| Homo sapiens chromosome 15, clone RP11-617F23, complete sequence Length = 183773 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 271 aacatctgcatctaccacaagcag 294 |||||||||||||| ||||||||| Sbjct: 20720 aacatctgcatctatcacaagcag 20743
>gb|AC154302.1| Mus musculus BAC clone RP23-378K2 from chromosome 9, complete sequence Length = 167400 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 caggacagaccagacacacacaca 95 |||| ||||||||||||||||||| Sbjct: 118773 caggtcagaccagacacacacaca 118796
>gb|AC092769.7| Homo sapiens chromosome 15, clone CTD-2315E11, complete sequence Length = 82168 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 aacatctgcatctaccacaagcag 294 |||||||||||||| ||||||||| Sbjct: 1775 aacatctgcatctatcacaagcag 1752
>dbj|AP003617.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0502H06 Length = 165630 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 gcgcgtcggcgtgcgcgcgg 415 |||||||||||||||||||| Sbjct: 124983 gcgcgtcggcgtgcgcgcgg 124964
>dbj|AP004571.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0652A05 Length = 150455 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 gcgcgtcggcgtgcgcgcgg 415 |||||||||||||||||||| Sbjct: 16646 gcgcgtcggcgtgcgcgcgg 16627
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 cggcgtgcgcgcggtggacg 421 |||||||||||||||||||| Sbjct: 3581041 cggcgtgcgcgcggtggacg 3581022
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 ggtgcgcgtcggcgtgcgcg 412 |||||||||||||||||||| Sbjct: 6723566 ggtgcgcgtcggcgtgcgcg 6723585
>emb|BX649561.4| Mouse DNA sequence from clone RP23-392O16 on chromosome 2, complete sequence Length = 183877 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 acacacacacagggacacag 104 |||||||||||||||||||| Sbjct: 127341 acacacacacagggacacag 127360
>dbj|AK062590.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-G10, full insert sequence Length = 1663 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 gcgcgtcggcgtgcgcgcgg 415 |||||||||||||||||||| Sbjct: 1277 gcgcgtcggcgtgcgcgcgg 1296
>gb|AC111056.20| Mus musculus chromosome 3, clone RP24-537K9, complete sequence Length = 165443 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 cagacacacacacagggacacagg 105 ||||||||||||||| |||||||| Sbjct: 16355 cagacacacacacagagacacagg 16332
>emb|CT025694.11| Mouse DNA sequence from clone RP24-66N5 on chromosome 14, complete sequence Length = 203022 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 gacacacacacagggacaca 103 |||||||||||||||||||| Sbjct: 134128 gacacacacacagggacaca 134109
>emb|CR848164.2| Xenopus tropicalis finished cDNA, clone TGas032p03 Length = 2619 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cgctgctctctcctccgcgc 34 |||||||||||||||||||| Sbjct: 131 cgctgctctctcctccgcgc 112
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 411 cgcggtggacgtcgacgccgcgct 434 |||||||| ||||||||||||||| Sbjct: 383457 cgcggtggccgtcgacgccgcgct 383434
>gb|AC122463.4| Mus musculus BAC clone RP24-296C19 from 9, complete sequence Length = 162528 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 gccgggggagggcgcgccgg 337 |||||||||||||||||||| Sbjct: 156569 gccgggggagggcgcgccgg 156550
>gb|AC004678.1|AC004678 Homo sapiens chromosome 19, cosmid R34094, complete sequence Length = 38939 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 accagacacacacacagggacaca 103 ||||||||||||||||||| |||| Sbjct: 35306 accagacacacacacagggccaca 35329
>emb|CT010453.10| Mouse DNA sequence from clone RP23-173H11 on chromosome 14, complete sequence Length = 199017 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 ttccagtggtgctgctgctt 58 |||||||||||||||||||| Sbjct: 52545 ttccagtggtgctgctgctt 52526
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 tggatgctcagccgggtcaa 467 |||||||||||||||||||| Sbjct: 1460228 tggatgctcagccgggtcaa 1460247
>emb|AL627314.6| Mouse DNA sequence from clone RP23-354H24 on chromosome 4, complete sequence Length = 196461 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 acacacacacagggacacag 104 |||||||||||||||||||| Sbjct: 96701 acacacacacagggacacag 96682
>emb|AL627074.11| Mouse DNA sequence from clone RP23-465A17 on chromosome 3, complete sequence Length = 177133 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 acacacacacagggacacag 104 |||||||||||||||||||| Sbjct: 25637 acacacacacagggacacag 25618
>emb|AL670464.12| Mouse DNA sequence from clone RP23-12I24 on chromosome 4, complete sequence Length = 203558 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 cacacacacagggacacagg 105 |||||||||||||||||||| Sbjct: 194892 cacacacacagggacacagg 194873
>dbj|D50308.1| Lysobacter lactamgenus DNA for alpha-aminoadipyl-cysteinyl-valine synthetase, complete cds Length = 11401 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 401 tcggcgtgcgcgcggtggacgtcg 424 ||||||||||||||| |||||||| Sbjct: 2567 tcggcgtgcgcgcggcggacgtcg 2590 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 13,558,042 Number of Sequences: 3902068 Number of extensions: 13558042 Number of successful extensions: 187245 Number of sequences better than 10.0: 123 Number of HSP's better than 10.0 without gapping: 123 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 184652 Number of HSP's gapped (non-prelim): 2587 length of query: 495 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 473 effective length of database: 17,147,199,772 effective search space: 8110625492156 effective search space used: 8110625492156 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)