ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast50a08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY921641.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR4) mRNA, complete cds Length = 1833 Score = 311 bits (157), Expect = 9e-82 Identities = 226/249 (90%) Strand = Plus / Plus Query: 122 gggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtgccgcagccgcacg 181 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 722 gggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtcccgcagccgcacg 781 Query: 182 ccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatcaccgaggccacgg 241 |||||| ||||||| ||||||||||||| ||||| | |||||||| |||||||||| Sbjct: 782 gcgccgtctactacgcgcagcgcgccacccggggcggcctcctcatcactgaggccacgg 841 Query: 242 gcgtctccgacacggcgcaggggtacacggacacccccggcgtgtggacggccgagcagg 301 |||||||||||||||||||||| ||||| ||||| || || ||||||||| |||| |||| Sbjct: 842 gcgtctccgacacggcgcagggctacaccgacacgccgggagtgtggacgcccgaccagg 901 Query: 302 tggaggcgtggcggcccgccgtcgacgccgtgcacgccaagggcgccgtcttcttctgcc 361 ||| ||||||||||||| ||| |||||||| |||||||||||||||||||||||||||| Sbjct: 902 tggcggcgtggcggcccatcgtagacgccgtccacgccaagggcgccgtcttcttctgcc 961 Query: 362 agctctggc 370 ||||||||| Sbjct: 962 agctctggc 970
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 198 bits (100), Expect = 9e-48 Identities = 223/264 (84%) Strand = Plus / Minus Query: 107 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacg 166 |||| ||| ||||||| |||||||| |||||||| |||||| | |||||||||||||||| Sbjct: 5907009 tcgagctctcccaccgtgtggtgctcgcgccgctcacgcggaaccgctcctacggcaacg 5906950 Query: 167 tgccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctca 226 |||||| ||||||||| | |||||||| ||||||||||||| |||||| | ||| Sbjct: 5906949 tgccgcggccgcacgcggtgctgtactacacgcagcgcgccaccagcggcggcctcctcg 5906890 Query: 227 tcaccgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgt 286 |||| |||||||| |||||||||||||| |||||||| ||| |||||||||||||| | | Sbjct: 5906889 tcacggaggccaccggcgtctccgacaccgcgcagggctacccggacacccccggcatct 5906830 Query: 287 ggacggccgagcaggtggaggcgtggcggcccgccgtcgacgccgtgcacgccaagggcg 346 ||||| ||||||| ||||||||| |||| |||||||||||| ||| |||||||| Sbjct: 5906829 ggacgcagcagcaggtcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcg 5906770 Query: 347 ccgtcttcttctgccagctctggc 370 || ||||| ||||||||||||||| Sbjct: 5906769 ccctcttcatctgccagctctggc 5906746 Score = 182 bits (92), Expect = 5e-43 Identities = 221/264 (83%) Strand = Plus / Minus Query: 107 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacg 166 |||| ||| ||||||| ||| |||| ||||| |||||||| || ||||||||||||| Sbjct: 5896806 tcgatctctcccaccgtgtgctgctctcgccgatgacgcggtgccgatcctacggcaacg 5896747 Query: 167 tgccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctca 226 |||||||||||||||| || |||||||| ||||||||||||| |||||| | |||| Sbjct: 5896746 tgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagcggcggcctcctca 5896687 Query: 227 tcaccgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgt 286 |||| |||||||| |||||||||||||| |||||||| ||| |||| || |||||||| | Sbjct: 5896686 tcacggaggccaccggcgtctccgacaccgcgcagggctacccggagacacccggcgtct 5896627 Query: 287 ggacggccgagcaggtggaggcgtggcggcccgccgtcgacgccgtgcacgccaagggcg 346 ||||| ||||| || ||||||||| |||| |||||||||||| ||| |||||||| Sbjct: 5896626 ggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcg 5896567 Query: 347 ccgtcttcttctgccagctctggc 370 || ||||| ||||||||||||||| Sbjct: 5896566 ccctcttcatctgccagctctggc 5896543 Score = 178 bits (90), Expect = 8e-42 Identities = 219/262 (83%) Strand = Plus / Minus Query: 109 gacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtg 168 |||||| ||||||| ||| |||| |||||| |||||||| || ||||||||||||||| Sbjct: 5891134 gacctctcccaccgtgtgctgctcgcgccgatgacgcggtgccgatcctacggcaacgtg 5891075 Query: 169 ccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatc 228 |||||||||||||| || |||||||| ||||||||||||| |||||| | |||||| Sbjct: 5891074 ccgcagccgcacgcggcgctgtactacacgcagcgcgccacccgcggcggcctcctcatc 5891015 Query: 229 accgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgtgg 288 || |||||||| |||||||||| ||| |||||||| ||| |||| || |||||||| || Sbjct: 5891014 acggaggccaccggcgtctccgccaccgcgcagggctacccggagacacccggcgtccgg 5890955 Query: 289 acggccgagcaggtggaggcgtggcggcccgccgtcgacgccgtgcacgccaagggcgcc 348 ||| ||||| || ||||||||| |||| |||||||||||| ||| |||||||||| Sbjct: 5890954 acgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgcc 5890895 Query: 349 gtcttcttctgccagctctggc 370 ||||| ||||||||||||||| Sbjct: 5890894 ctcttcatctgccagctctggc 5890873 Score = 149 bits (75), Expect = 7e-33 Identities = 144/167 (86%) Strand = Plus / Minus Query: 116 cccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtgccgcagc 175 |||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||| Sbjct: 5925032 cccaccgggtggtgctcgcgccgctgacgcggtgccgctcctacggccacgtgccgcagc 5924973 Query: 176 cgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatcaccgagg 235 |||||||||| ||||||||| ||||||||||||| |||||| | |||||| | |||| Sbjct: 5924972 cgcacgccgcggtgtactactcgcagcgcgccaccaacggcggactcctcatcgcggagg 5924913 Query: 236 ccacgggcgtctccgacacggcgcaggggtacacggacacccccggc 282 |||| | | ||||| ||| |||||||| ||| |||||||||||||| Sbjct: 5924912 ccactgtcatctcccccaccgcgcagggctacccggacacccccggc 5924866 Score = 107 bits (54), Expect = 3e-20 Identities = 195/242 (80%) Strand = Plus / Minus Query: 116 cccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtgccgcagc 175 ||||||| |||||||| |||||||| |||||| ||||||||||||||||||||||||| Sbjct: 5930316 cccaccgtgtggtgctcgcgccgctcacgcggtgccgctcctacggcaacgtgccgcagc 5930257 Query: 176 cgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatcaccgagg 235 ||||||| || ||||||||| |||||| || ||| ||||| | |||||| | |||| Sbjct: 5930256 cgcacgcggcggtgtactactcgcagcgggcgaccaggggcggcctcctcatcgcggagg 5930197 Query: 236 ccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgtggacggccg 295 |||| | | ||||| ||| |||||||| ||| |||| ||||||||| | | ||| Sbjct: 5930196 ccaccgacatctcccccaccgcgcagggctacccggagacccccggcatctacacgcagc 5930137 Query: 296 agcaggtggaggcgtggcggcccgccgtcgacgccgtgcacgccaagggcgccgtcttct 355 ||||| | ||||||||| |||| |||||||||||| ||| |||||||||| |||||| Sbjct: 5930136 agcagatcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttct 5930077 Query: 356 tc 357 || Sbjct: 5930076 tc 5930075 Score = 101 bits (51), Expect = 2e-18 Identities = 207/259 (79%) Strand = Plus / Minus Query: 107 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacg 166 |||| ||| ||||||| |||||||| ||||||||||| ||| |||||||||| | ||| Sbjct: 5916622 tcgagctctcccaccgcgtggtgctcgcgccgctgactcggtgccgctcctacgaccacg 5916563 Query: 167 tgccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctca 226 |||| ||||||||||| || |||||||| ||||||||||||| ||||| | |||| Sbjct: 5916562 tgccacagccgcacgcggcgctgtactactcgcagcgcgccaccaatggcggcctcctca 5916503 Query: 227 tcaccgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgt 286 || | |||||||| || || |||| ||| | | |||| ||| |||| | ||||||||| | Sbjct: 5916502 tctcggaggccaccggggtgtccgccaccggggagggctacccggagatccccggcgtct 5916443 Query: 287 ggacggccgagcaggtggaggcgtggcggcccgccgtcgacgccgtgcacgccaagggcg 346 ||||| ||||||| |||||||| ||| |||||||||||| ||| |||||||| Sbjct: 5916442 ggacgcggcagcaggtcaaggcgtggaaacccatcgtcgacgccgtccaccgcaagggcg 5916383 Query: 347 ccgtcttcttctgccagct 365 | |||||||||||||||| Sbjct: 5916382 cgctcttcttctgccagct 5916364 Score = 42.1 bits (21), Expect = 1.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 321 cgtcgacgccgtgcacgccaagggcgccgtcttcttc 357 |||||||||||| ||| |||||||||| |||||||| Sbjct: 5924827 cgtcgacgccgtccaccgcaagggcgccctcttcttc 5924791
>dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0024N18 Length = 128739 Score = 198 bits (100), Expect = 9e-48 Identities = 223/264 (84%) Strand = Plus / Minus Query: 107 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacg 166 |||| ||| ||||||| |||||||| |||||||| |||||| | |||||||||||||||| Sbjct: 28661 tcgagctctcccaccgtgtggtgctcgcgccgctcacgcggaaccgctcctacggcaacg 28602 Query: 167 tgccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctca 226 |||||| ||||||||| | |||||||| ||||||||||||| |||||| | ||| Sbjct: 28601 tgccgcggccgcacgcggtgctgtactacacgcagcgcgccaccagcggcggcctcctcg 28542 Query: 227 tcaccgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgt 286 |||| |||||||| |||||||||||||| |||||||| ||| |||||||||||||| | | Sbjct: 28541 tcacggaggccaccggcgtctccgacaccgcgcagggctacccggacacccccggcatct 28482 Query: 287 ggacggccgagcaggtggaggcgtggcggcccgccgtcgacgccgtgcacgccaagggcg 346 ||||| ||||||| ||||||||| |||| |||||||||||| ||| |||||||| Sbjct: 28481 ggacgcagcagcaggtcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcg 28422 Query: 347 ccgtcttcttctgccagctctggc 370 || ||||| ||||||||||||||| Sbjct: 28421 ccctcttcatctgccagctctggc 28398 Score = 182 bits (92), Expect = 5e-43 Identities = 221/264 (83%) Strand = Plus / Minus Query: 107 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacg 166 |||| ||| ||||||| ||| |||| ||||| |||||||| || ||||||||||||| Sbjct: 18458 tcgatctctcccaccgtgtgctgctctcgccgatgacgcggtgccgatcctacggcaacg 18399 Query: 167 tgccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctca 226 |||||||||||||||| || |||||||| ||||||||||||| |||||| | |||| Sbjct: 18398 tgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagcggcggcctcctca 18339 Query: 227 tcaccgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgt 286 |||| |||||||| |||||||||||||| |||||||| ||| |||| || |||||||| | Sbjct: 18338 tcacggaggccaccggcgtctccgacaccgcgcagggctacccggagacacccggcgtct 18279 Query: 287 ggacggccgagcaggtggaggcgtggcggcccgccgtcgacgccgtgcacgccaagggcg 346 ||||| ||||| || ||||||||| |||| |||||||||||| ||| |||||||| Sbjct: 18278 ggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcg 18219 Query: 347 ccgtcttcttctgccagctctggc 370 || ||||| ||||||||||||||| Sbjct: 18218 ccctcttcatctgccagctctggc 18195 Score = 178 bits (90), Expect = 8e-42 Identities = 219/262 (83%) Strand = Plus / Minus Query: 109 gacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtg 168 |||||| ||||||| ||| |||| |||||| |||||||| || ||||||||||||||| Sbjct: 12786 gacctctcccaccgtgtgctgctcgcgccgatgacgcggtgccgatcctacggcaacgtg 12727 Query: 169 ccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatc 228 |||||||||||||| || |||||||| ||||||||||||| |||||| | |||||| Sbjct: 12726 ccgcagccgcacgcggcgctgtactacacgcagcgcgccacccgcggcggcctcctcatc 12667 Query: 229 accgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgtgg 288 || |||||||| |||||||||| ||| |||||||| ||| |||| || |||||||| || Sbjct: 12666 acggaggccaccggcgtctccgccaccgcgcagggctacccggagacacccggcgtccgg 12607 Query: 289 acggccgagcaggtggaggcgtggcggcccgccgtcgacgccgtgcacgccaagggcgcc 348 ||| ||||| || ||||||||| |||| |||||||||||| ||| |||||||||| Sbjct: 12606 acgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgcc 12547 Query: 349 gtcttcttctgccagctctggc 370 ||||| ||||||||||||||| Sbjct: 12546 ctcttcatctgccagctctggc 12525 Score = 149 bits (75), Expect = 7e-33 Identities = 144/167 (86%) Strand = Plus / Minus Query: 116 cccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtgccgcagc 175 |||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||| Sbjct: 46684 cccaccgggtggtgctcgcgccgctgacgcggtgccgctcctacggccacgtgccgcagc 46625 Query: 176 cgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatcaccgagg 235 |||||||||| ||||||||| ||||||||||||| |||||| | |||||| | |||| Sbjct: 46624 cgcacgccgcggtgtactactcgcagcgcgccaccaacggcggactcctcatcgcggagg 46565 Query: 236 ccacgggcgtctccgacacggcgcaggggtacacggacacccccggc 282 |||| | | ||||| ||| |||||||| ||| |||||||||||||| Sbjct: 46564 ccactgtcatctcccccaccgcgcagggctacccggacacccccggc 46518 Score = 107 bits (54), Expect = 3e-20 Identities = 195/242 (80%) Strand = Plus / Minus Query: 116 cccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtgccgcagc 175 ||||||| |||||||| |||||||| |||||| ||||||||||||||||||||||||| Sbjct: 51968 cccaccgtgtggtgctcgcgccgctcacgcggtgccgctcctacggcaacgtgccgcagc 51909 Query: 176 cgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatcaccgagg 235 ||||||| || ||||||||| |||||| || ||| ||||| | |||||| | |||| Sbjct: 51908 cgcacgcggcggtgtactactcgcagcgggcgaccaggggcggcctcctcatcgcggagg 51849 Query: 236 ccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgtggacggccg 295 |||| | | ||||| ||| |||||||| ||| |||| ||||||||| | | ||| Sbjct: 51848 ccaccgacatctcccccaccgcgcagggctacccggagacccccggcatctacacgcagc 51789 Query: 296 agcaggtggaggcgtggcggcccgccgtcgacgccgtgcacgccaagggcgccgtcttct 355 ||||| | ||||||||| |||| |||||||||||| ||| |||||||||| |||||| Sbjct: 51788 agcagatcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttct 51729 Query: 356 tc 357 || Sbjct: 51728 tc 51727 Score = 101 bits (51), Expect = 2e-18 Identities = 207/259 (79%) Strand = Plus / Minus Query: 107 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacg 166 |||| ||| ||||||| |||||||| ||||||||||| ||| |||||||||| | ||| Sbjct: 38274 tcgagctctcccaccgcgtggtgctcgcgccgctgactcggtgccgctcctacgaccacg 38215 Query: 167 tgccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctca 226 |||| ||||||||||| || |||||||| ||||||||||||| ||||| | |||| Sbjct: 38214 tgccacagccgcacgcggcgctgtactactcgcagcgcgccaccaatggcggcctcctca 38155 Query: 227 tcaccgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgt 286 || | |||||||| || || |||| ||| | | |||| ||| |||| | ||||||||| | Sbjct: 38154 tctcggaggccaccggggtgtccgccaccggggagggctacccggagatccccggcgtct 38095 Query: 287 ggacggccgagcaggtggaggcgtggcggcccgccgtcgacgccgtgcacgccaagggcg 346 ||||| ||||||| |||||||| ||| |||||||||||| ||| |||||||| Sbjct: 38094 ggacgcggcagcaggtcaaggcgtggaaacccatcgtcgacgccgtccaccgcaagggcg 38035 Query: 347 ccgtcttcttctgccagct 365 | |||||||||||||||| Sbjct: 38034 cgctcttcttctgccagct 38016 Score = 42.1 bits (21), Expect = 1.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 321 cgtcgacgccgtgcacgccaagggcgccgtcttcttc 357 |||||||||||| ||| |||||||||| |||||||| Sbjct: 46479 cgtcgacgccgtccaccgcaagggcgccctcttcttc 46443
>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0537F07 Length = 147724 Score = 198 bits (100), Expect = 9e-48 Identities = 223/264 (84%) Strand = Plus / Minus Query: 107 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacg 166 |||| ||| ||||||| |||||||| |||||||| |||||| | |||||||||||||||| Sbjct: 107784 tcgagctctcccaccgtgtggtgctcgcgccgctcacgcggaaccgctcctacggcaacg 107725 Query: 167 tgccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctca 226 |||||| ||||||||| | |||||||| ||||||||||||| |||||| | ||| Sbjct: 107724 tgccgcggccgcacgcggtgctgtactacacgcagcgcgccaccagcggcggcctcctcg 107665 Query: 227 tcaccgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgt 286 |||| |||||||| |||||||||||||| |||||||| ||| |||||||||||||| | | Sbjct: 107664 tcacggaggccaccggcgtctccgacaccgcgcagggctacccggacacccccggcatct 107605 Query: 287 ggacggccgagcaggtggaggcgtggcggcccgccgtcgacgccgtgcacgccaagggcg 346 ||||| ||||||| ||||||||| |||| |||||||||||| ||| |||||||| Sbjct: 107604 ggacgcagcagcaggtcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcg 107545 Query: 347 ccgtcttcttctgccagctctggc 370 || ||||| ||||||||||||||| Sbjct: 107544 ccctcttcatctgccagctctggc 107521 Score = 182 bits (92), Expect = 5e-43 Identities = 221/264 (83%) Strand = Plus / Minus Query: 107 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacg 166 |||| ||| ||||||| ||| |||| ||||| |||||||| || ||||||||||||| Sbjct: 97581 tcgatctctcccaccgtgtgctgctctcgccgatgacgcggtgccgatcctacggcaacg 97522 Query: 167 tgccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctca 226 |||||||||||||||| || |||||||| ||||||||||||| |||||| | |||| Sbjct: 97521 tgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagcggcggcctcctca 97462 Query: 227 tcaccgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgt 286 |||| |||||||| |||||||||||||| |||||||| ||| |||| || |||||||| | Sbjct: 97461 tcacggaggccaccggcgtctccgacaccgcgcagggctacccggagacacccggcgtct 97402 Query: 287 ggacggccgagcaggtggaggcgtggcggcccgccgtcgacgccgtgcacgccaagggcg 346 ||||| ||||| || ||||||||| |||| |||||||||||| ||| |||||||| Sbjct: 97401 ggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcg 97342 Query: 347 ccgtcttcttctgccagctctggc 370 || ||||| ||||||||||||||| Sbjct: 97341 ccctcttcatctgccagctctggc 97318 Score = 178 bits (90), Expect = 8e-42 Identities = 219/262 (83%) Strand = Plus / Minus Query: 109 gacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtg 168 |||||| ||||||| ||| |||| |||||| |||||||| || ||||||||||||||| Sbjct: 91909 gacctctcccaccgtgtgctgctcgcgccgatgacgcggtgccgatcctacggcaacgtg 91850 Query: 169 ccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatc 228 |||||||||||||| || |||||||| ||||||||||||| |||||| | |||||| Sbjct: 91849 ccgcagccgcacgcggcgctgtactacacgcagcgcgccacccgcggcggcctcctcatc 91790 Query: 229 accgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgtgg 288 || |||||||| |||||||||| ||| |||||||| ||| |||| || |||||||| || Sbjct: 91789 acggaggccaccggcgtctccgccaccgcgcagggctacccggagacacccggcgtccgg 91730 Query: 289 acggccgagcaggtggaggcgtggcggcccgccgtcgacgccgtgcacgccaagggcgcc 348 ||| ||||| || ||||||||| |||| |||||||||||| ||| |||||||||| Sbjct: 91729 acgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgcc 91670 Query: 349 gtcttcttctgccagctctggc 370 ||||| ||||||||||||||| Sbjct: 91669 ctcttcatctgccagctctggc 91648 Score = 149 bits (75), Expect = 7e-33 Identities = 144/167 (86%) Strand = Plus / Minus Query: 116 cccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtgccgcagc 175 |||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||| Sbjct: 125807 cccaccgggtggtgctcgcgccgctgacgcggtgccgctcctacggccacgtgccgcagc 125748 Query: 176 cgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatcaccgagg 235 |||||||||| ||||||||| ||||||||||||| |||||| | |||||| | |||| Sbjct: 125747 cgcacgccgcggtgtactactcgcagcgcgccaccaacggcggactcctcatcgcggagg 125688 Query: 236 ccacgggcgtctccgacacggcgcaggggtacacggacacccccggc 282 |||| | | ||||| ||| |||||||| ||| |||||||||||||| Sbjct: 125687 ccactgtcatctcccccaccgcgcagggctacccggacacccccggc 125641 Score = 107 bits (54), Expect = 3e-20 Identities = 195/242 (80%) Strand = Plus / Minus Query: 116 cccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtgccgcagc 175 ||||||| |||||||| |||||||| |||||| ||||||||||||||||||||||||| Sbjct: 131091 cccaccgtgtggtgctcgcgccgctcacgcggtgccgctcctacggcaacgtgccgcagc 131032 Query: 176 cgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatcaccgagg 235 ||||||| || ||||||||| |||||| || ||| ||||| | |||||| | |||| Sbjct: 131031 cgcacgcggcggtgtactactcgcagcgggcgaccaggggcggcctcctcatcgcggagg 130972 Query: 236 ccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgtggacggccg 295 |||| | | ||||| ||| |||||||| ||| |||| ||||||||| | | ||| Sbjct: 130971 ccaccgacatctcccccaccgcgcagggctacccggagacccccggcatctacacgcagc 130912 Query: 296 agcaggtggaggcgtggcggcccgccgtcgacgccgtgcacgccaagggcgccgtcttct 355 ||||| | ||||||||| |||| |||||||||||| ||| |||||||||| |||||| Sbjct: 130911 agcagatcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttct 130852 Query: 356 tc 357 || Sbjct: 130851 tc 130850 Score = 101 bits (51), Expect = 2e-18 Identities = 207/259 (79%) Strand = Plus / Minus Query: 107 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacg 166 |||| ||| ||||||| |||||||| ||||||||||| ||| |||||||||| | ||| Sbjct: 117397 tcgagctctcccaccgcgtggtgctcgcgccgctgactcggtgccgctcctacgaccacg 117338 Query: 167 tgccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctca 226 |||| ||||||||||| || |||||||| ||||||||||||| ||||| | |||| Sbjct: 117337 tgccacagccgcacgcggcgctgtactactcgcagcgcgccaccaatggcggcctcctca 117278 Query: 227 tcaccgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgt 286 || | |||||||| || || |||| ||| | | |||| ||| |||| | ||||||||| | Sbjct: 117277 tctcggaggccaccggggtgtccgccaccggggagggctacccggagatccccggcgtct 117218 Query: 287 ggacggccgagcaggtggaggcgtggcggcccgccgtcgacgccgtgcacgccaagggcg 346 ||||| ||||||| |||||||| ||| |||||||||||| ||| |||||||| Sbjct: 117217 ggacgcggcagcaggtcaaggcgtggaaacccatcgtcgacgccgtccaccgcaagggcg 117158 Query: 347 ccgtcttcttctgccagct 365 | |||||||||||||||| Sbjct: 117157 cgctcttcttctgccagct 117139 Score = 42.1 bits (21), Expect = 1.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 321 cgtcgacgccgtgcacgccaagggcgccgtcttcttc 357 |||||||||||| ||| |||||||||| |||||||| Sbjct: 125602 cgtcgacgccgtccaccgcaagggcgccctcttcttc 125566
>dbj|AK105590.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-129-A06, full insert sequence Length = 1311 Score = 198 bits (100), Expect = 9e-48 Identities = 223/264 (84%) Strand = Plus / Plus Query: 107 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacg 166 |||| ||| ||||||| |||||||| |||||||| |||||| | |||||||||||||||| Sbjct: 156 tcgagctctcccaccgtgtggtgctcgcgccgctcacgcggaaccgctcctacggcaacg 215 Query: 167 tgccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctca 226 |||||| ||||||||| | |||||||| ||||||||||||| |||||| | ||| Sbjct: 216 tgccgcggccgcacgcggtgctgtactacacgcagcgcgccaccagcggcggcctcctcg 275 Query: 227 tcaccgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgt 286 |||| |||||||| |||||||||||||| |||||||| ||| |||||||||||||| | | Sbjct: 276 tcacggaggccaccggcgtctccgacaccgcgcagggctacccggacacccccggcatct 335 Query: 287 ggacggccgagcaggtggaggcgtggcggcccgccgtcgacgccgtgcacgccaagggcg 346 ||||| ||||||| ||||||||| |||| |||||||||||| ||| |||||||| Sbjct: 336 ggacgcagcagcaggtcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcg 395 Query: 347 ccgtcttcttctgccagctctggc 370 || ||||| ||||||||||||||| Sbjct: 396 ccctcttcatctgccagctctggc 419
>dbj|AK104256.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-E01, full insert sequence Length = 1281 Score = 198 bits (100), Expect = 9e-48 Identities = 223/264 (84%) Strand = Plus / Plus Query: 107 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacg 166 |||| ||| |||||||||||||||| ||||| |||||||| || ||||||||||||| Sbjct: 153 tcgatctctcccaccgggtggtgctctcgccgatgacgcggtgccgatcctacggcaacg 212 Query: 167 tgccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctca 226 |||||||||||||||| || |||||||| ||||||||||||| |||||| | |||| Sbjct: 213 tgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagcggcggcctcctca 272 Query: 227 tcaccgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgt 286 |||| |||||||| |||||||||||||| |||||||| ||| |||| || |||||||| | Sbjct: 273 tcacggaggccaccggcgtctccgacaccgcgcagggctacccggagacacccggcgtct 332 Query: 287 ggacggccgagcaggtggaggcgtggcggcccgccgtcgacgccgtgcacgccaagggcg 346 ||||| ||||| || ||||||||| |||| |||||||||||| ||| |||||||| Sbjct: 333 ggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcg 392 Query: 347 ccgtcttcttctgccagctctggc 370 || ||||| ||||||||||||||| Sbjct: 393 ccctcttcatctgccagctctggc 416
>dbj|AK104193.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D11, full insert sequence Length = 1281 Score = 198 bits (100), Expect = 9e-48 Identities = 223/264 (84%) Strand = Plus / Plus Query: 107 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacg 166 |||| ||| |||||||||||||||| ||||| |||||||| || ||||||||||||| Sbjct: 153 tcgatctctcccaccgggtggtgctctcgccgatgacgcggtgccgatcctacggcaacg 212 Query: 167 tgccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctca 226 |||||||||||||||| || |||||||| ||||||||||||| |||||| | |||| Sbjct: 213 tgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagcggcggcctcctca 272 Query: 227 tcaccgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgt 286 |||| |||||||| |||||||||||||| |||||||| ||| |||| || |||||||| | Sbjct: 273 tcacggaggccaccggcgtctccgacaccgcgcagggctacccggagacacccggcgtct 332 Query: 287 ggacggccgagcaggtggaggcgtggcggcccgccgtcgacgccgtgcacgccaagggcg 346 ||||| ||||| || ||||||||| |||| |||||||||||| ||| |||||||| Sbjct: 333 ggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcg 392 Query: 347 ccgtcttcttctgccagctctggc 370 || ||||| ||||||||||||||| Sbjct: 393 ccctcttcatctgccagctctggc 416
>dbj|AK104039.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-G06, full insert sequence Length = 1422 Score = 198 bits (100), Expect = 9e-48 Identities = 223/264 (84%) Strand = Plus / Plus Query: 107 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacg 166 |||| ||| |||||||||||||||| ||||| |||||||| || ||||||||||||| Sbjct: 148 tcgatctctcccaccgggtggtgctctcgccgatgacgcggtgccgatcctacggcaacg 207 Query: 167 tgccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctca 226 |||||||||||||||| || |||||||| ||||||||||||| |||||| | |||| Sbjct: 208 tgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagcggcggcctcctca 267 Query: 227 tcaccgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgt 286 |||| |||||||| |||||||||||||| |||||||| ||| |||| || |||||||| | Sbjct: 268 tcacggaggccaccggcgtctccgacaccgcgcagggctacccggagacacccggcgtct 327 Query: 287 ggacggccgagcaggtggaggcgtggcggcccgccgtcgacgccgtgcacgccaagggcg 346 ||||| ||||| || ||||||||| |||| |||||||||||| ||| |||||||| Sbjct: 328 ggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcg 387 Query: 347 ccgtcttcttctgccagctctggc 370 || ||||| ||||||||||||||| Sbjct: 388 ccctcttcatctgccagctctggc 411
>dbj|AK061212.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-D07, full insert sequence Length = 1434 Score = 182 bits (92), Expect = 5e-43 Identities = 221/264 (83%) Strand = Plus / Plus Query: 107 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacg 166 |||| ||| ||||||| ||| |||| ||||| |||||||| || ||||||||||||| Sbjct: 153 tcgatctctcccaccgtgtgctgctctcgccgatgacgcggtgccgatcctacggcaacg 212 Query: 167 tgccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctca 226 |||||||||||||||| || |||||||| ||||||||||||| |||||| | |||| Sbjct: 213 tgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagcggcggcctcctca 272 Query: 227 tcaccgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgt 286 |||| |||||||| |||||||||||||| |||||||| ||| |||| || |||||||| | Sbjct: 273 tcacggaggccaccggcgtctccgacaccgcgcagggctacccggagacacccggcgtct 332 Query: 287 ggacggccgagcaggtggaggcgtggcggcccgccgtcgacgccgtgcacgccaagggcg 346 ||||| ||||| || ||||||||| |||| |||||||||||| ||| |||||||| Sbjct: 333 ggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcg 392 Query: 347 ccgtcttcttctgccagctctggc 370 || ||||| ||||||||||||||| Sbjct: 393 ccctcttcatctgccagctctggc 416
>dbj|AK108079.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-E09, full insert sequence Length = 1517 Score = 178 bits (90), Expect = 8e-42 Identities = 219/262 (83%) Strand = Plus / Plus Query: 109 gacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtg 168 |||||| ||||||| ||| |||| |||||| |||||||| || ||||||||||||||| Sbjct: 233 gacctctcccaccgtgtgctgctcgcgccgatgacgcggtgccgatcctacggcaacgtg 292 Query: 169 ccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatc 228 |||||||||||||| || |||||||| ||||||||||||| |||||| | |||||| Sbjct: 293 ccgcagccgcacgcggcgctgtactacacgcagcgcgccacccgcggcggcctcctcatc 352 Query: 229 accgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgtgg 288 || |||||||| |||||||||| ||| |||||||| ||| |||| || |||||||| || Sbjct: 353 acggaggccaccggcgtctccgccaccgcgcagggctacccggagacacccggcgtccgg 412 Query: 289 acggccgagcaggtggaggcgtggcggcccgccgtcgacgccgtgcacgccaagggcgcc 348 ||| ||||| || ||||||||| |||| |||||||||||| ||| |||||||||| Sbjct: 413 acgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgcc 472 Query: 349 gtcttcttctgccagctctggc 370 ||||| ||||||||||||||| Sbjct: 473 ctcttcatctgccagctctggc 494
>gb|AY921638.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR1) mRNA, complete cds Length = 1465 Score = 176 bits (89), Expect = 3e-41 Identities = 212/253 (83%) Strand = Plus / Plus Query: 118 caccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtgccgcagccg 177 ||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 173 caccgggtggtgctggcgccgctgacgaggtgccgctcctacggcaacgtgccgcagcca 232 Query: 178 cacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatcaccgaggcc 237 |||||||||||||||||| |||||||||||| || || |||||||| | |||||| Sbjct: 233 cacgccgccgtgtactactcccagcgcgccaccaggggtggcctgctcatcgcggaggcc 292 Query: 238 acgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgtggacggccgag 297 ||||| || || | ||| |||||||||||| |||| || || ||| | |||||| ||| Sbjct: 293 acgggggtgtcggccaccgcgcaggggtacccggagactcctggcatctggacgcaggag 352 Query: 298 caggtggaggcgtggcggcccgccgtcgacgccgtgcacgccaagggcgccgtcttcttc 357 ||||| ||||||||| |||| |||||||||||| ||| |||||||||| ||||| || Sbjct: 353 caggtcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccatcttcgtc 412 Query: 358 tgccagctctggc 370 |||||| |||||| Sbjct: 413 tgccagatctggc 425
>gb|AY108052.1| Zea mays PCO079165 mRNA sequence Length = 1489 Score = 176 bits (89), Expect = 3e-41 Identities = 212/253 (83%) Strand = Plus / Plus Query: 118 caccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtgccgcagccg 177 ||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 195 caccgggtggtgctggcgccgctgacgaggtgccgctcctacggcaacgtgccgcagcca 254 Query: 178 cacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatcaccgaggcc 237 |||||||||||||||||| |||||||||||| || || |||||||| | |||||| Sbjct: 255 cacgccgccgtgtactactcccagcgcgccaccaggggtggcctgctcatcgcggaggcc 314 Query: 238 acgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgtggacggccgag 297 ||||| || || | ||| |||||||||||| |||| || || ||| | |||||| ||| Sbjct: 315 acgggggtgtcggccaccgcgcaggggtacccggagactcctggcatctggacgcaggag 374 Query: 298 caggtggaggcgtggcggcccgccgtcgacgccgtgcacgccaagggcgccgtcttcttc 357 ||||| ||||||||| |||| |||||||||||| ||| |||||||||| ||||| || Sbjct: 375 caggtcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccatcttcgtc 434 Query: 358 tgccagctctggc 370 |||||| |||||| Sbjct: 435 tgccagatctggc 447
>gb|AY921639.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR2) mRNA, complete cds Length = 1409 Score = 168 bits (85), Expect = 8e-39 Identities = 211/253 (83%) Strand = Plus / Plus Query: 118 caccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtgccgcagccg 177 ||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 158 caccgggtggtgctggcgccgctgacgaggtgccgctcctacggcaacgtgccgcagcca 217 Query: 178 cacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatcaccgaggcc 237 |||||||||||||||||| ||||||||||||| || || |||||||| | |||||| Sbjct: 218 cacgccgccgtgtactactcgcagcgcgccaccaggggtggcctgctcatcgcggaggcc 277 Query: 238 acgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgtggacggccgag 297 ||||| || || | ||| |||||||||| | |||| | || ||| | |||||| ||| Sbjct: 278 acgggggtgtcggccaccgcgcaggggttcccggagtctcctggcatctggacgcaggag 337 Query: 298 caggtggaggcgtggcggcccgccgtcgacgccgtgcacgccaagggcgccgtcttcttc 357 ||||| ||||||||| |||| |||||||||||| ||| |||||||||| ||||| || Sbjct: 338 caggtcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccatcttcgtc 397 Query: 358 tgccagctctggc 370 |||||| |||||| Sbjct: 398 tgccagatctggc 410
>gb|AY921640.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR3) mRNA, complete cds Length = 1431 Score = 135 bits (68), Expect = 1e-28 Identities = 203/248 (81%) Strand = Plus / Plus Query: 116 cccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtgccgcagc 175 ||||||| ||||||||||||||| |||||||| ||| || ||| |||||||||||| Sbjct: 138 cccaccgcgtggtgctggcgccgatgacgcggtgccgcgccatcggggacgtgccgcagc 197 Query: 176 cgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatcaccgagg 235 |||||||||||||||||||| ||||||||||| | ||||| ||||||||||||||| Sbjct: 198 cgcacgccgccgtgtactactcgcagcgcgccagcaggggcggcgtgctcatcaccgagg 257 Query: 236 ccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgtggacggccg 295 |||||| || |||| ||| |||||||| | | ||| |||||||| | |||||| | Sbjct: 258 gcacgggggtgtccgccaccgcgcagggcttcccggggtcccccggcatctggacgcagg 317 Query: 296 agcaggtggaggcgtggcggcccgccgtcgacgccgtgcacgccaagggcgccgtcttct 355 ||||||||| ||||||| |||| |||||||||||| ||| |||||| || |||||| Sbjct: 318 agcaggtggcggcgtggaagcccatcgtcgacgccgtccaccgcaagggtgcgctcttct 377 Query: 356 tctgccag 363 |||||||| Sbjct: 378 tctgccag 385
>dbj|AK072596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125E21, full insert sequence Length = 1295 Score = 133 bits (67), Expect = 4e-28 Identities = 154/183 (84%) Strand = Plus / Plus Query: 188 tgtactacgggcagcgcgccaccgccggcgggatgctcatcaccgaggccacgggcgtct 247 |||||||| ||||||||||||| |||||| | ||| |||| |||||||| ||||||| Sbjct: 220 tgtactacacgcagcgcgccaccagcggcggcctcctcgtcacggaggccaccggcgtct 279 Query: 248 ccgacacggcgcaggggtacacggacacccccggcgtgtggacggccgagcaggtggagg 307 ||||||| |||||||| ||| |||||||||||||| | |||||| ||||||| |||| Sbjct: 280 ccgacaccgcgcagggctacccggacacccccggcatctggacgcagcagcaggtcgagg 339 Query: 308 cgtggcggcccgccgtcgacgccgtgcacgccaagggcgccgtcttcttctgccagctct 367 ||||| |||| |||||||||||| ||| |||||||||| ||||| |||||||||||| Sbjct: 340 cgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcatctgccagctct 399 Query: 368 ggc 370 ||| Sbjct: 400 ggc 402 Score = 69.9 bits (35), Expect = 6e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 107 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacg 166 |||| ||| ||||||| |||||||| |||||||| |||||| | |||||||||||||||| Sbjct: 157 tcgagctctcccaccgtgtggtgctcgcgccgctcacgcggaaccgctcctacggcaacg 216 Query: 167 tgc 169 ||| Sbjct: 217 tgc 219
>emb|AJ557138.1|OSA557138 Oryza sativa (japonica cultivar-group) mRNA for oxo-phytodienoic acid reductase (opda gene) Length = 1343 Score = 107 bits (54), Expect = 3e-20 Identities = 195/242 (80%) Strand = Plus / Plus Query: 116 cccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtgccgcagc 175 ||||||| |||||||| |||||||| |||||| ||||||||||||||||||||||||| Sbjct: 122 cccaccgtgtggtgctcgcgccgctcacgcggtgccgctcctacggcaacgtgccgcagc 181 Query: 176 cgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatcaccgagg 235 ||||||| || ||||||||| |||||| || ||| ||||| | |||||| | |||| Sbjct: 182 cgcacgcggcggtgtactactcgcagcgggcgaccaggggcggcctcctcatcgcggagg 241 Query: 236 ccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgtggacggccg 295 |||| | | ||||| ||| |||||||| ||| |||| ||||||||| | | ||| Sbjct: 242 ccaccgacatctcccccaccgcgcagggctacccggagacccccggcatctacacgcagc 301 Query: 296 agcaggtggaggcgtggcggcccgccgtcgacgccgtgcacgccaagggcgccgtcttct 355 ||||| | ||||||||| |||| |||||||||||| ||| |||||||||| |||||| Sbjct: 302 agcagatcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttct 361 Query: 356 tc 357 || Sbjct: 362 tc 363
>dbj|AB122088.1| Oryza sativa (japonica cultivar-group) OPDAR1 gene for 12-oxo-phytodienoic acid reductase, complete cds Length = 2492 Score = 107 bits (54), Expect = 3e-20 Identities = 195/242 (80%) Strand = Plus / Plus Query: 116 cccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtgccgcagc 175 ||||||| |||||||| |||||||| |||||| ||||||||||||||||||||||||| Sbjct: 1136 cccaccgtgtggtgctcgcgccgctcacgcggtgccgctcctacggcaacgtgccgcagc 1195 Query: 176 cgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatcaccgagg 235 ||||||| || ||||||||| |||||| || ||| ||||| | |||||| | |||| Sbjct: 1196 cgcacgcggcggtgtactactcgcagcgggcgaccaggggcggcctcctcatcgcggagg 1255 Query: 236 ccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgtggacggccg 295 |||| | | ||||| ||| |||||||| ||| |||| ||||||||| | | ||| Sbjct: 1256 ccaccgacatctcccccaccgcgcagggctacccggagacccccggcatctacacgcagc 1315 Query: 296 agcaggtggaggcgtggcggcccgccgtcgacgccgtgcacgccaagggcgccgtcttct 355 ||||| | ||||||||| |||| |||||||||||| ||| |||||||||| |||||| Sbjct: 1316 agcagatcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttct 1375 Query: 356 tc 357 || Sbjct: 1376 tc 1377
>dbj|AK103067.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117P12, full insert sequence Length = 1520 Score = 107 bits (54), Expect = 3e-20 Identities = 195/242 (80%) Strand = Plus / Plus Query: 116 cccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtgccgcagc 175 ||||||| |||||||| |||||||| |||||| ||||||||||||||||||||||||| Sbjct: 188 cccaccgtgtggtgctcgcgccgctcacgcggtgccgctcctacggcaacgtgccgcagc 247 Query: 176 cgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatcaccgagg 235 ||||||| || ||||||||| |||||| || ||| ||||| | |||||| | |||| Sbjct: 248 cgcacgcggcggtgtactactcgcagcgggcgaccaggggcggcctcctcatcgcggagg 307 Query: 236 ccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgtggacggccg 295 |||| | | ||||| ||| |||||||| ||| |||| ||||||||| | | ||| Sbjct: 308 ccaccgacatctcccccaccgcgcagggctacccggagacccccggcatctacacgcagc 367 Query: 296 agcaggtggaggcgtggcggcccgccgtcgacgccgtgcacgccaagggcgccgtcttct 355 ||||| | ||||||||| |||| |||||||||||| ||| |||||||||| |||||| Sbjct: 368 agcagatcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttct 427 Query: 356 tc 357 || Sbjct: 428 tc 429
>dbj|AB040743.1| Oryza sativa RRJ4 mRNA for 12-oxophytodienoic acid reductase, complete cds Length = 1384 Score = 107 bits (54), Expect = 3e-20 Identities = 195/242 (80%) Strand = Plus / Plus Query: 116 cccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtgccgcagc 175 ||||||| |||||||| |||||||| |||||| ||||||||||||||||||||||||| Sbjct: 160 cccaccgtgtggtgctcgcgccgctcacgcggtgccgctcctacggcaacgtgccgcagc 219 Query: 176 cgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatcaccgagg 235 ||||||| || ||||||||| |||||| || ||| ||||| | |||||| | |||| Sbjct: 220 cgcacgcggcggtgtactactcgcagcgggcgaccaggggcggcctcctcatcgcggagg 279 Query: 236 ccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgtggacggccg 295 |||| | | ||||| ||| |||||||| ||| |||| ||||||||| | | ||| Sbjct: 280 ccaccgacatctcccccaccgcgcagggctacccggagacccccggcatctacacgcagc 339 Query: 296 agcaggtggaggcgtggcggcccgccgtcgacgccgtgcacgccaagggcgccgtcttct 355 ||||| | ||||||||| |||| |||||||||||| ||| |||||||||| |||||| Sbjct: 340 agcagatcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttct 399 Query: 356 tc 357 || Sbjct: 400 tc 401
>emb|AJ557139.1|OSA557139 Oryza sativa (japonica cultivar-group) partial mRNA for oxo-phytodienoic acid reductase (opda2 gene) Length = 1248 Score = 85.7 bits (43), Expect = 9e-14 Identities = 166/207 (80%) Strand = Plus / Plus Query: 151 cgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgggcagcgcgccacc 210 |||||||||||||||||||||||||||||||| || ||||||||| |||||| || ||| Sbjct: 1 cgctcctacggcaacgtgccgcagccgcacgcggcggtgtactactcgcagcgggcgacc 60 Query: 211 gccggcgggatgctcatcaccgaggccacgggcgtctccgacacggcgcaggggtacacg 270 ||||| | |||||| | |||||||| | | ||||| ||| |||||||| ||| || Sbjct: 61 aggggcggcctcctcatcgcggaggccaccgacatctcccccaccgcgcagggctacccg 120 Query: 271 gacacccccggcgtgtggacggccgagcaggtggaggcgtggcggcccgccgtcgacgcc 330 || ||||||||| | | ||| ||||| | ||||||||| |||| |||||||||| Sbjct: 121 gagacccccggcatctacacgcagcagcagatcgaggcgtggaagcccatcgtcgacgcc 180 Query: 331 gtgcacgccaagggcgccgtcttcttc 357 || ||| |||||||||| |||||||| Sbjct: 181 gtccaccgcaagggcgccctcttcttc 207
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 67.9 bits (34), Expect = 2e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 330 cgtgcacgccaagggcgccgtcttcttctgccag 363 |||||||||||||||||||||||||||||||||| Sbjct: 15169717 cgtgcacgccaagggcgccgtcttcttctgccag 15169684 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 328 gccgtgcacgccaagggcgccgtcttcttctgcca 362 |||||||||||||||||||| ||||||||||||| Sbjct: 15176090 gccgtgcacgccaagggcgcactcttcttctgcca 15176056
>dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0043B10 Length = 167399 Score = 67.9 bits (34), Expect = 2e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 330 cgtgcacgccaagggcgccgtcttcttctgccag 363 |||||||||||||||||||||||||||||||||| Sbjct: 141683 cgtgcacgccaagggcgccgtcttcttctgccag 141650 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 328 gccgtgcacgccaagggcgccgtcttcttctgcca 362 |||||||||||||||||||| ||||||||||||| Sbjct: 148056 gccgtgcacgccaagggcgcactcttcttctgcca 148022
>dbj|AP002914.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0493G01 Length = 167587 Score = 67.9 bits (34), Expect = 2e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 330 cgtgcacgccaagggcgccgtcttcttctgccag 363 |||||||||||||||||||||||||||||||||| Sbjct: 23090 cgtgcacgccaagggcgccgtcttcttctgccag 23057 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 328 gccgtgcacgccaagggcgccgtcttcttctgcca 362 |||||||||||||||||||| ||||||||||||| Sbjct: 29463 gccgtgcacgccaagggcgcactcttcttctgcca 29429
>dbj|AK100034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149N02, full insert sequence Length = 2710 Score = 67.9 bits (34), Expect = 2e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 330 cgtgcacgccaagggcgccgtcttcttctgccag 363 |||||||||||||||||||||||||||||||||| Sbjct: 451 cgtgcacgccaagggcgccgtcttcttctgccag 484
>gb|AY921644.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR7) mRNA, complete cds Length = 1594 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 111 cctcgcccaccgggtggtgctggcgccgctgac 143 |||||||||||||||||||||||||||| |||| Sbjct: 326 cctcgcccaccgggtggtgctggcgccgatgac 358
>ref|XM_482784.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1531 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 117 ccaccgggtggtgctggcgccgctgacgcgg 147 |||||||||||||||||||||| |||||||| Sbjct: 205 ccaccgggtggtgctggcgccgatgacgcgg 235
>ref|XM_507257.1| PREDICTED Oryza sativa (japonica cultivar-group), P0493A04.35 mRNA Length = 1560 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 117 ccaccgggtggtgctggcgccgctgacgcgg 147 |||||||||||||||||||||| |||||||| Sbjct: 220 ccaccgggtggtgctggcgccgatgacgcgg 250
>dbj|AK121554.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033G12, full insert sequence Length = 1613 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 328 gccgtgcacgccaagggcgccgtcttcttctgcca 362 |||||||||||||||||||| ||||||||||||| Sbjct: 574 gccgtgcacgccaagggcgcactcttcttctgcca 608
>dbj|AK104843.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-G07, full insert sequence Length = 1531 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 117 ccaccgggtggtgctggcgccgctgacgcgg 147 |||||||||||||||||||||| |||||||| Sbjct: 205 ccaccgggtggtgctggcgccgatgacgcgg 235
>dbj|AK071203.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083E07, full insert sequence Length = 1560 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 117 ccaccgggtggtgctggcgccgctgacgcgg 147 |||||||||||||||||||||| |||||||| Sbjct: 220 ccaccgggtggtgctggcgccgatgacgcgg 250
>gb|AY921643.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR6) mRNA, complete cds Length = 1267 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 321 cgtcgacgccgtgcacgccaagggcgccgtcttcttctgccagctctggc 370 |||||||||||| ||||||| || |||||||||||| ||||||||||| Sbjct: 305 cgtcgacgccgtccacgccagcggtgccgtcttcttcgcccagctctggc 354
>gb|AY106849.1| Zea mays PCO134627 mRNA sequence Length = 1274 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 321 cgtcgacgccgtgcacgccaagggcgccgtcttcttctgccagctctggc 370 |||||||||||| ||||||| || |||||||||||| ||||||||||| Sbjct: 312 cgtcgacgccgtccacgccagcggtgccgtcttcttcgcccagctctggc 361
>gb|AY921645.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR8) mRNA, complete cds Length = 1529 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 111 cctcgcccaccgggtggtgctggcgccgctgac 143 |||||| ||||||||||||||||||||| |||| Sbjct: 190 cctcgcgcaccgggtggtgctggcgccgatgac 222
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 286 tggacggccgagcaggtggaggcgtggcggccc 318 ||||||| |||||||| |||||||||||||||| Sbjct: 1969658 tggacggacgagcaggcggaggcgtggcggccc 1969690
>gb|AE011767.1| Xanthomonas axonopodis pv. citri str. 306, section 145 of 469 of the complete genome Length = 11162 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Minus Query: 184 gccgtgtactacgggcagcgcgccaccgccggc 216 |||| ||||||||| |||||||||||||||||| Sbjct: 9266 gccgagtactacggccagcgcgccaccgccggc 9234
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 324 cgacgccgtgcacgccaagggc 345 |||||||||||||||||||||| Sbjct: 4096592 cgacgccgtgcacgccaagggc 4096613
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 122 gggtggtgctggcgccgctgacgcgg 147 ||||||||||||||||| |||||||| Sbjct: 22540279 gggtggtgctggcgccgatgacgcgg 22540304
>dbj|AP004707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0690E03 Length = 139924 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 122 gggtggtgctggcgccgctgacgcgg 147 ||||||||||||||||| |||||||| Sbjct: 13780 gggtggtgctggcgccgatgacgcgg 13805
>dbj|AP004586.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0493A04 Length = 149367 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 122 gggtggtgctggcgccgctgacgcgg 147 ||||||||||||||||| |||||||| Sbjct: 135207 gggtggtgctggcgccgatgacgcgg 135232
>ref|NM_100810.1| Arabidopsis thaliana 12-oxophytodienoate reductase AT1G09400 mRNA, complete cds Length = 1093 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 350 tcttcttctgccagctctggc 370 ||||||||||||||||||||| Sbjct: 297 tcttcttctgccagctctggc 317
>gb|AF506421.1| Gloeocystidiellum luridum strain HK9808 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence Length = 1270 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 agtccaagcccatccctctcatgac 83 |||||||||||| |||||||||||| Sbjct: 145 agtccaagcccagccctctcatgac 121
>gb|DQ185924.1| Hericium erinaceum strain CBS 204.76 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 630 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 agtccaagcccatccctctcatgac 83 |||||||||||| |||||||||||| Sbjct: 414 agtccaagcccagccctctcatgac 390
>gb|DQ185922.1| Hericium erinaceum strain CBS 260.74 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 630 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 agtccaagcccatccctctcatgac 83 |||||||||||| |||||||||||| Sbjct: 414 agtccaagcccagccctctcatgac 390
>gb|DQ185921.1| Hericium erinaceum strain CBS 233.87 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 633 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 agtccaagcccatccctctcatgac 83 |||||||||||| |||||||||||| Sbjct: 414 agtccaagcccagccctctcatgac 390
>gb|DQ185920.1| Hericium erinaceum strain ATCC 56457 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 630 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 agtccaagcccatccctctcatgac 83 |||||||||||| |||||||||||| Sbjct: 414 agtccaagcccagccctctcatgac 390
>gb|AY534596.1| Hericium erinaceum strain KUMC e1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 630 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 agtccaagcccatccctctcatgac 83 |||||||||||| |||||||||||| Sbjct: 414 agtccaagcccagccctctcatgac 390
>gb|AY534583.1| Hericium erinaceum strain CBS 485.95 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 630 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 agtccaagcccatccctctcatgac 83 |||||||||||| |||||||||||| Sbjct: 414 agtccaagcccagccctctcatgac 390
>gb|AY534582.1| Hericium coralloides strain IFO 7716 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 630 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 agtccaagcccatccctctcatgac 83 |||||||||||| |||||||||||| Sbjct: 414 agtccaagcccagccctctcatgac 390
>gb|AY534581.1| Hericium americanum strain CBS 493.63 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 630 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 agtccaagcccatccctctcatgac 83 |||||||||||| |||||||||||| Sbjct: 414 agtccaagcccagccctctcatgac 390
>gb|AC003970.1| Arabidopsis thaliana chromosome I BAC F14J9 genomic sequence contains phyA marker, complete sequence Length = 95865 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 tcttcttctgccagctctggc 370 ||||||||||||||||||||| Sbjct: 16166 tcttcttctgccagctctggc 16146
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 tgctggcgccgctgacgcggc 148 ||||||||||||||||||||| Sbjct: 2318269 tgctggcgccgctgacgcggc 2318249
>gb|AF287980.1|AF287980 Hericium americanum internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 544 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 agtccaagcccatccctctcatgac 83 |||||||||||| |||||||||||| Sbjct: 385 agtccaagcccagccctctcatgac 361
>gb|AF287978.1|AF287978 Hericium alpestre internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 543 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 agtccaagcccatccctctcatgac 83 |||||||||||| |||||||||||| Sbjct: 384 agtccaagcccagccctctcatgac 360
>gb|AF173216.1|AF173216 Hericium coralloides internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA, complete sequence; and internal transcribed spacer 2, partial sequence Length = 543 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 agtccaagcccatccctctcatgac 83 |||||||||||| |||||||||||| Sbjct: 384 agtccaagcccagccctctcatgac 360
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 cgggtggtgctggcgccgctg 141 ||||||||||||||||||||| Sbjct: 4698462 cgggtggtgctggcgccgctg 4698442
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 315 gcccgccgtcgacgccgtgca 335 ||||||||||||||||||||| Sbjct: 2224173 gcccgccgtcgacgccgtgca 2224153
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 105 cctcgacctcgcccaccgggtggtg 129 |||| |||||||||||||||||||| Sbjct: 1821992 cctctacctcgcccaccgggtggtg 1821968
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 tggtgctggcgccgctgacg 144 |||||||||||||||||||| Sbjct: 2631980 tggtgctggcgccgctgacg 2631961
>ref|XM_464953.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1068 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 gcggcccgccgtcgacgccg 331 |||||||||||||||||||| Sbjct: 159 gcggcccgccgtcgacgccg 178
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 gtggtgctggcgccgctgac 143 |||||||||||||||||||| Sbjct: 638073 gtggtgctggcgccgctgac 638054
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 tacgggcagcgcgccaccgccggc 216 ||||| |||||||||||||||||| Sbjct: 1597026 tacggccagcgcgccaccgccggc 1597003
>ref|XM_391385.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG11209.1) partial mRNA Length = 2694 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 ggagcctgaggccgagtccaagcc 68 |||||||||||| ||||||||||| Sbjct: 1518 ggagcctgaggctgagtccaagcc 1541
>emb|AJ972678.1| Pythium aphanidermatum kpa1 gene for P-type ATPase Length = 3354 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 cacgccgccgtgtactacgg 197 |||||||||||||||||||| Sbjct: 2277 cacgccgccgtgtactacgg 2258
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16 Length = 348706 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 cgccggcgggatgctcatcaccga 233 ||||||||| |||||||||||||| Sbjct: 101228 cgccggcggcatgctcatcaccga 101205
>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14 Length = 347894 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 cgccggcgggatgctcatcaccga 233 ||||||||| |||||||||||||| Sbjct: 178912 cgccggcggcatgctcatcaccga 178935
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 cgccggcgggatgctcatcaccga 233 ||||||||| |||||||||||||| Sbjct: 737 cgccggcggcatgctcatcaccga 760
>emb|BX901976.22| Zebrafish DNA sequence from clone DKEY-101P20 in linkage group 22, complete sequence Length = 201928 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 166 gtgccgcagccgcacgccgccgtgtact 193 ||||||||||||| ||||||||| |||| Sbjct: 24813 gtgccgcagccgcccgccgccgtctact 24786
>gb|AY131229.2| Streptomyces sp. 139 exopolysaccharide gene cluster, complete sequence Length = 31310 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 ggtggtgctggcgccgctga 142 |||||||||||||||||||| Sbjct: 7606 ggtggtgctggcgccgctga 7625
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 tacgggcagcgcgccaccgccggc 216 ||||| |||||||||||||||||| Sbjct: 1981827 tacggccagcgcgccaccgccggc 1981804
>gb|AE005885.1| Caulobacter crescentus CB15 section 211 of 359 of the complete genome Length = 11024 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 119 accgggtggtgctggcgccgctgacgcg 146 ||||||||||| |||||||| ||||||| Sbjct: 8768 accgggtggtgatggcgccgatgacgcg 8741
>gb|AE005721.1| Caulobacter crescentus CB15 section 47 of 359 of the complete genome Length = 12858 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 accgggtggtgctggcgccg 138 |||||||||||||||||||| Sbjct: 3253 accgggtggtgctggcgccg 3272
>gb|AE012121.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 29 of 460 of the complete genome Length = 10770 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ggtgctggcgccgctgacgc 145 |||||||||||||||||||| Sbjct: 9676 ggtgctggcgccgctgacgc 9695
>gb|DP000057.1| Dasypus novemcinctus target 117 genomic scaffold Length = 444202 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 ggccgagcaggtggaggcgt 310 |||||||||||||||||||| Sbjct: 70922 ggccgagcaggtggaggcgt 70941
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 306 ggcgtggcggcccgccgtcgacgccgtg 333 |||| ||||||||||||||| ||||||| Sbjct: 3806745 ggcggggcggcccgccgtcgtcgccgtg 3806718 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 cgccgtcgacgccgtgcacg 337 |||||||||||||||||||| Sbjct: 3656128 cgccgtcgacgccgtgcacg 3656109
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ggtgctggcgccgctgacgc 145 |||||||||||||||||||| Sbjct: 319833 ggtgctggcgccgctgacgc 319852
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 gcggcccgccgtcgacgccg 331 |||||||||||||||||||| Sbjct: 10511154 gcggcccgccgtcgacgccg 10511135
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 324 cgacgccgtgcacgccaagggcgc 347 |||||||||||||||| ||||||| Sbjct: 4393302 cgacgccgtgcacgccgagggcgc 4393279
>dbj|AP005694.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0063E14 Length = 174415 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 gcggcccgccgtcgacgccg 331 |||||||||||||||||||| Sbjct: 92322 gcggcccgccgtcgacgccg 92303
>gb|AY439015.3| Mycobacterium smegmatis isolate mc2 155 insertion sequence IS1096 TnpA (tnpA) and TnpR genes, complete cds; and GPL gene cluster, complete sequence Length = 67229 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 cgccgtcgacgccgtgcacg 337 |||||||||||||||||||| Sbjct: 43767 cgccgtcgacgccgtgcacg 43786
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 gtactacgggcagcgcgccaccgc 212 |||||||| ||||||||||||||| Sbjct: 1270681 gtactacgcgcagcgcgccaccgc 1270704
>dbj|AK058480.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-C09, full insert sequence Length = 1068 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 gcggcccgccgtcgacgccg 331 |||||||||||||||||||| Sbjct: 159 gcggcccgccgtcgacgccg 178
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 tacgggcagcgcgccaccgccggc 216 ||||| |||||||||||||||||| Sbjct: 2003860 tacggccagcgcgccaccgccggc 2003837
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 cggccgagcaggtggaggcg 309 |||||||||||||||||||| Sbjct: 1898505 cggccgagcaggtggaggcg 1898524
>gb|AC114627.8| Mus musculus chromosome 3, clone RP24-108F9, complete sequence Length = 152152 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 ccaagcccatccctctcatg 81 |||||||||||||||||||| Sbjct: 78153 ccaagcccatccctctcatg 78172 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,175,436 Number of Sequences: 3902068 Number of extensions: 2175436 Number of successful extensions: 49779 Number of sequences better than 10.0: 84 Number of HSP's better than 10.0 without gapping: 84 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 47776 Number of HSP's gapped (non-prelim): 1988 length of query: 370 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 348 effective length of database: 17,147,199,772 effective search space: 5967225520656 effective search space used: 5967225520656 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
