ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast50a03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_550389.1| Oryza sativa (japonica cultivar-group), mRNA 190 2e-45
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 190 2e-45
3dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic D... 190 2e-45
4ref|XM_476066.1| Oryza sativa (japonica cultivar-group), predic... 78 2e-11
5gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome... 78 2e-11
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 78 2e-11
7gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome... 78 2e-11
8dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 66 6e-08
9dbj|AP003617.3| Oryza sativa (japonica cultivar-group) genomic D... 66 6e-08
10dbj|AK060513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 6e-08
11ref|XM_464540.1| Oryza sativa (japonica cultivar-group), mRNA 56 6e-05
12dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 56 6e-05
13dbj|AP004571.3| Oryza sativa (japonica cultivar-group) genomic D... 56 6e-05
14dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic D... 56 6e-05
15dbj|AP004045.3| Oryza sativa (japonica cultivar-group) genomic D... 56 6e-05
16dbj|AK120020.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 6e-05
17dbj|AK062590.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 6e-05
18dbj|AB113664.1| Iris hollandica Ih5GT mRNA for anthocyanin 5-O-g... 54 2e-04
19ref|XM_483068.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.001
20dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
21dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
22dbj|AP004557.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
23dbj|AP006050.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
24ref|XM_471860.1| Oryza sativa (japonica cultivar-group), predic... 48 0.015
25emb|AL731634.4|OSJN00276 Oryza sativa genomic DNA, chromosome 4,... 48 0.015
26dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.015
27dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.059
28dbj|AP005554.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.059
29ref|XM_482293.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.23
30ref|XM_471830.1| Oryza sativa (japonica cultivar-group), predic... 44 0.23
31gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 44 0.23
32emb|AL663021.4|OSJN00218 Oryza sativa genomic DNA, chromosome 4,... 44 0.23
33dbj|AP004636.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.23
34dbj|AP003872.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.23
35ref|NM_208973.1| Eremothecium gossypii ACR218Wp (ACR218W), mRNA 44 0.23
36gb|AY542311.1| Sorghum bicolor clone SB20O07 b1-1, b1-2, putativ... 44 0.23
37ref|XM_506982.1| PREDICTED Oryza sativa (japonica cultivar-group... 42 0.93
38ref|XM_467869.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.93
39gb|AC120990.3| Oryza sativa (japonica cultivar-group) chromosome... 42 0.93
40emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete ... 42 0.93
41emb|BX640430.1| Bordetella parapertussis strain 12822, complete ... 42 0.93
42emb|BX640421.1| Bordetella pertussis strain Tohama I, complete g... 42 0.93
43emb|AL732516.6| Mouse DNA sequence from clone RP23-403H17 on chr... 42 0.93
44gb|AE012313.1| Xanthomonas campestris pv. campestris str. ATCC 3... 42 0.93
45gb|AC016780.6| Genomic Sequence For Oryza sativa (japonica culti... 42 0.93
46gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 42 0.93
47dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.93
48dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.93
49dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.93
50gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nb... 42 0.93
51dbj|AK104985.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.93
52dbj|AK073587.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.93
53dbj|AK063413.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.93
54gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 0.93
55gb|U10884.1|BPU10884 Bacteriophage phi-Lf adsorption protein (II... 42 0.93
56ref|NM_127536.2| Arabidopsis thaliana protein binding AT2G19780 ... 40 3.7
57ref|XM_474839.1| Oryza sativa (japonica cultivar-group), predic... 40 3.7
58ref|XM_474827.1| Oryza sativa (japonica cultivar-group), predic... 40 3.7
59ref|XM_471827.1| Oryza sativa (japonica cultivar-group), predic... 40 3.7
60ref|XM_471859.1| Oryza sativa (japonica cultivar-group), predic... 40 3.7
61ref|XM_471822.1| Oryza sativa (japonica cultivar-group), predic... 40 3.7
62ref|XM_471823.1| Oryza sativa (japonica cultivar-group), predic... 40 3.7
63ref|XM_467864.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.7
64ref|XM_469560.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.7
65ref|XM_477378.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.7
66gb|AF377946.3| Oryza sativa (japonica cultivar-group) chromosome... 40 3.7
67gb|AC147426.2| Oryza sativa chromosome 3 B1377B10 genomic seque... 40 3.7
68ref|XM_613872.2| PREDICTED: Bos taurus similar to teratocarcinom... 40 3.7
69gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 3.7
70emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genom... 40 3.7
71emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete ... 40 3.7
72emb|AL606590.3|OSJN00031 Oryza sativa genomic DNA, chromosome 4,... 40 3.7
73gb|AC090433.10| Chlamydomonas reinhardtii clone cr-19b23, comple... 40 3.7
74gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 3.7
75gb|AC005169.3| Arabidopsis thaliana chromosome 2 clone F6F22 map... 40 3.7
76dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.7
77dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.7
78emb|BX818896.1|CNS0A9TN Arabidopsis thaliana Full-length cDNA Co... 40 3.7
79gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B... 40 3.7
80gb|BT005020.1| Arabidopsis thaliana clone U20712 putative diseas... 40 3.7
81dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 3.7
82gb|BT004135.1| Arabidopsis thaliana clone RAFL15-20-F01 (R20712)... 40 3.7
83gb|AC091532.13| Oryza sativa chromosome 3 BAC OSJNBa0078A17 geno... 40 3.7
84gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 3.7
85dbj|AP006173.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.7
86dbj|AP005201.4| Oryza sativa (japonica cultivar-group) genomic D... 40 3.7
87dbj|AK119530.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.7
88emb|X14172.1|OSPHY18 Rice phy 18 gene for phytochrome 40 3.7
89dbj|AK110892.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.7
90dbj|AK105966.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.7
91dbj|AK105783.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.7
92dbj|AK099276.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.7
93dbj|AK070389.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.7
94dbj|AK066301.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.7
95emb|AL606443.3|OSJN00008 Oryza sativa genomic DNA, chromosome 4,... 40 3.7 
>ref|XM_550389.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1455

 Score =  190 bits (96), Expect = 2e-45
 Identities = 132/144 (91%)
 Strand = Plus / Plus

                                                                       
Query: 123 gaggcgccgcacttcctcgtggtcacgtacccggcgcagggccacatcaacccggcgcgc 182
           |||||||  ||||||||||| ||||||||||| || ||||||||||||||||||||||||
Sbjct: 25  gaggcgcatcacttcctcgtcgtcacgtaccccgcccagggccacatcaacccggcgcgc 84

                                                                       
Query: 183 cacctcgcgctgcgcctgctccgcgccacgccgggcgcccgcgtcaccgtctccaccgcc 242
           |||||||||| ||||||    |||||| |||||||||||||||||||| |||||||||||
Sbjct: 85  cacctcgcgcggcgcctcgcgcgcgccgcgccgggcgcccgcgtcaccatctccaccgcc 144

                                   
Query: 243 gtctccgcctgccgcaagatgttc 266
           ||||||||||||||||||||||||
Sbjct: 145 gtctccgcctgccgcaagatgttc 168
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  190 bits (96), Expect = 2e-45
 Identities = 132/144 (91%)
 Strand = Plus / Minus

                                                                           
Query: 123     gaggcgccgcacttcctcgtggtcacgtacccggcgcagggccacatcaacccggcgcgc 182
               |||||||  ||||||||||| ||||||||||| || ||||||||||||||||||||||||
Sbjct: 4153619 gaggcgcatcacttcctcgtcgtcacgtaccccgcccagggccacatcaacccggcgcgc 4153560

                                                                           
Query: 183     cacctcgcgctgcgcctgctccgcgccacgccgggcgcccgcgtcaccgtctccaccgcc 242
               |||||||||| ||||||    |||||| |||||||||||||||||||| |||||||||||
Sbjct: 4153559 cacctcgcgcggcgcctcgcgcgcgccgcgccgggcgcccgcgtcaccatctccaccgcc 4153500

                                       
Query: 243     gtctccgcctgccgcaagatgttc 266
               ||||||||||||||||||||||||
Sbjct: 4153499 gtctccgcctgccgcaagatgttc 4153476
to top
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0406H10
          Length = 156419

 Score =  190 bits (96), Expect = 2e-45
 Identities = 132/144 (91%)
 Strand = Plus / Minus

                                                                          
Query: 123    gaggcgccgcacttcctcgtggtcacgtacccggcgcagggccacatcaacccggcgcgc 182
              |||||||  ||||||||||| ||||||||||| || ||||||||||||||||||||||||
Sbjct: 100590 gaggcgcatcacttcctcgtcgtcacgtaccccgcccagggccacatcaacccggcgcgc 100531

                                                                          
Query: 183    cacctcgcgctgcgcctgctccgcgccacgccgggcgcccgcgtcaccgtctccaccgcc 242
              |||||||||| ||||||    |||||| |||||||||||||||||||| |||||||||||
Sbjct: 100530 cacctcgcgcggcgcctcgcgcgcgccgcgccgggcgcccgcgtcaccatctccaccgcc 100471

                                      
Query: 243    gtctccgcctgccgcaagatgttc 266
              ||||||||||||||||||||||||
Sbjct: 100470 gtctccgcctgccgcaagatgttc 100447
to top
>ref|XM_476066.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1473

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                       
Query: 130 cgcacttcctcgtggtcacgtacccggcgcagggccacatcaacccggcgcgccacctcg 189
           ||||||||||| | |||||||||||| ||||||||||| |||  ||||||||||||||||
Sbjct: 20  cgcacttcctcatcgtcacgtacccgtcgcagggccacgtcacgccggcgcgccacctcg 79

              
Query: 190 cgc 192
           |||
Sbjct: 80  cgc 82



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 241 ccgtctccgcctgccgcaagatgttccc 268
           |||||||||| | |||||||||||||||
Sbjct: 128 ccgtctccgcgttccgcaagatgttccc 155
to top
>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09,
              complete sequence
          Length = 145070

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/63 (90%)
 Strand = Plus / Minus

                                                                          
Query: 130    cgcacttcctcgtggtcacgtacccggcgcagggccacatcaacccggcgcgccacctcg 189
              ||||||||||| | |||||||||||| ||||||||||| |||  ||||||||||||||||
Sbjct: 111019 cgcacttcctcatcgtcacgtacccgtcgcagggccacgtcacgccggcgcgccacctcg 110960

                 
Query: 190    cgc 192
              |||
Sbjct: 110959 cgc 110957



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 241    ccgtctccgcctgccgcaagatgttccc 268
              |||||||||| | |||||||||||||||
Sbjct: 110911 ccgtctccgcgttccgcaagatgttccc 110884
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/63 (90%)
 Strand = Plus / Minus

                                                                           
Query: 130     cgcacttcctcgtggtcacgtacccggcgcagggccacatcaacccggcgcgccacctcg 189
               ||||||||||| | |||||||||||| ||||||||||| |||  ||||||||||||||||
Sbjct: 4743014 cgcacttcctcatcgtcacgtacccgtcgcagggccacgtcacgccggcgcgccacctcg 4742955

                  
Query: 190     cgc 192
               |||
Sbjct: 4742954 cgc 4742952



 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 237      accgccgtctccgcctgccgc 257
                |||||||||||||||||||||
Sbjct: 28138667 accgccgtctccgcctgccgc 28138647



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 241     ccgtctccgcctgccgcaagatgttccc 268
               |||||||||| | |||||||||||||||
Sbjct: 4742906 ccgtctccgcgttccgcaagatgttccc 4742879
to top
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11,
             complete sequence
          Length = 187956

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 57/63 (90%)
 Strand = Plus / Minus

                                                                         
Query: 130   cgcacttcctcgtggtcacgtacccggcgcagggccacatcaacccggcgcgccacctcg 189
             ||||||||||| | |||||||||||| ||||||||||| |||  ||||||||||||||||
Sbjct: 15422 cgcacttcctcatcgtcacgtacccgtcgcagggccacgtcacgccggcgcgccacctcg 15363

                
Query: 190   cgc 192
             |||
Sbjct: 15362 cgc 15360



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 241   ccgtctccgcctgccgcaagatgttccc 268
             |||||||||| | |||||||||||||||
Sbjct: 15314 ccgtctccgcgttccgcaagatgttccc 15287
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 80/93 (86%), Gaps = 2/93 (2%)
 Strand = Plus / Plus

                                                                            
Query: 159      cagggccacatcaacccggcgcgccacctcgcgctgcgcctgctccgcgcca-cgccggg 217
                ||||||||||||||||||||||||| ||||||   ||||||| |  ||| |  |||||| 
Sbjct: 22926712 cagggccacatcaacccggcgcgccgcctcgccgcgcgcctgatg-gcgtcggcgccggc 22926770

                                                 
Query: 218      cgcccgcgtcaccgtctccaccgccgtctccgc 250
                ||| ||||||||| |||||||||||||||||||
Sbjct: 22926771 cgcgcgcgtcaccttctccaccgccgtctccgc 22926803



 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 94/116 (81%)
 Strand = Plus / Minus

                                                                            
Query: 128      gccgcacttcctcgtggtcacgtacccggcgcagggccacatcaacccggcgcgccacct 187
                |||||||||||||||| |||||| ||||   ||||||||||||   ||||||| || |||
Sbjct: 22951334 gccgcacttcctcgtgctcacgttcccgctccagggccacatcgcgccggcgctccgcct 22951275

                                                                        
Query: 188      cgcgctgcgcctgctccgcgccacgccgggcgcccgcgtcaccgtctccaccgccg 243
                |||   ||||||||||  |||| | || | ||| | ||||||| ||||||||||||
Sbjct: 22951274 cgccaggcgcctgctcgccgccgcccccgacgcgctcgtcaccttctccaccgccg 22951219



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                    
Query: 131     gcacttcctcgtggtcacgtacccggcgcagggccac 167
               |||| ||||||| ||| ||||||||||||||||||||
Sbjct: 9986093 gcacgtcctcgtcgtcccgtacccggcgcagggccac 9986129



 Score = 42.1 bits (21), Expect = 0.93
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 148     cgtacccggcgcagggccacatcaacccg 176
               |||||||||||||||||||| ||| ||||
Sbjct: 9931998 cgtacccggcgcagggccacctcatcccg 9932026
to top
>dbj|AP003617.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0502H06
          Length = 165630

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 80/93 (86%), Gaps = 2/93 (2%)
 Strand = Plus / Plus

                                                                          
Query: 159    cagggccacatcaacccggcgcgccacctcgcgctgcgcctgctccgcgcca-cgccggg 217
              ||||||||||||||||||||||||| ||||||   ||||||| |  ||| |  |||||| 
Sbjct: 101534 cagggccacatcaacccggcgcgccgcctcgccgcgcgcctgatg-gcgtcggcgccggc 101592

                                               
Query: 218    cgcccgcgtcaccgtctccaccgccgtctccgc 250
              ||| ||||||||| |||||||||||||||||||
Sbjct: 101593 cgcgcgcgtcaccttctccaccgccgtctccgc 101625



 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 94/116 (81%)
 Strand = Plus / Minus

                                                                          
Query: 128    gccgcacttcctcgtggtcacgtacccggcgcagggccacatcaacccggcgcgccacct 187
              |||||||||||||||| |||||| ||||   ||||||||||||   ||||||| || |||
Sbjct: 126156 gccgcacttcctcgtgctcacgttcccgctccagggccacatcgcgccggcgctccgcct 126097

                                                                      
Query: 188    cgcgctgcgcctgctccgcgccacgccgggcgcccgcgtcaccgtctccaccgccg 243
              |||   ||||||||||  |||| | || | ||| | ||||||| ||||||||||||
Sbjct: 126096 cgccaggcgcctgctcgccgccgcccccgacgcgctcgtcaccttctccaccgccg 126041
to top
>dbj|AK060513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-F01, full
           insert sequence
          Length = 1734

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 80/93 (86%), Gaps = 2/93 (2%)
 Strand = Plus / Plus

                                                                       
Query: 159 cagggccacatcaacccggcgcgccacctcgcgctgcgcctgctccgcgcca-cgccggg 217
           ||||||||||||||||||||||||| ||||||   ||||||| |  ||| |  |||||| 
Sbjct: 94  cagggccacatcaacccggcgcgccgcctcgccgcgcgcctgatg-gcgtcggcgccggc 152

                                            
Query: 218 cgcccgcgtcaccgtctccaccgccgtctccgc 250
           ||| ||||||||| |||||||||||||||||||
Sbjct: 153 cgcgcgcgtcaccttctccaccgccgtctccgc 185
to top
>ref|XM_464540.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1437

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 131 gcacttcctcgtggtcacgtacccggcgcagggccacatcaacccggc 178
           |||||||||||| ||| ||||||| |  ||||||||||||||||||||
Sbjct: 12  gcacttcctcgtcgtcgcgtaccctggccagggccacatcaacccggc 59
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                               
Query: 131     gcacttcctcgtggtcacgtacccggcgcagggccacatcaacccggc 178
               |||||||||||| ||| ||||||| |  ||||||||||||||||||||
Sbjct: 5775960 gcacttcctcgtcgtcgcgtaccctggccagggccacatcaacccggc 5776007



 Score = 42.1 bits (21), Expect = 0.93
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 148      cgtacccggcgcagggccacatcaacccg 176
                |||||||||||||||| ||||||| ||||
Sbjct: 31824594 cgtacccggcgcaggggcacatcaccccg 31824622



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 148      cgtacccggcgcagggccac 167
                ||||||||||||||||||||
Sbjct: 31807468 cgtacccggcgcagggccac 31807449
to top
>dbj|AP004571.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0652A05
          Length = 150455

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 94/116 (81%)
 Strand = Plus / Minus

                                                                         
Query: 128   gccgcacttcctcgtggtcacgtacccggcgcagggccacatcaacccggcgcgccacct 187
             |||||||||||||||| |||||| ||||   ||||||||||||   ||||||| || |||
Sbjct: 17819 gccgcacttcctcgtgctcacgttcccgctccagggccacatcgcgccggcgctccgcct 17760

                                                                     
Query: 188   cgcgctgcgcctgctccgcgccacgccgggcgcccgcgtcaccgtctccaccgccg 243
             |||   ||||||||||  |||| | || | ||| | ||||||| ||||||||||||
Sbjct: 17759 cgccaggcgcctgctcgccgccgcccccgacgcgctcgtcaccttctccaccgccg 17704
to top
>dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0544H11
          Length = 178376

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                            
Query: 131  gcacttcctcgtggtcacgtacccggcgcagggccacatcaacccggc 178
            |||||||||||| ||| ||||||| |  ||||||||||||||||||||
Sbjct: 5762 gcacttcctcgtcgtcgcgtaccctggccagggccacatcaacccggc 5809
to top
>dbj|AP004045.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1135_F06
          Length = 102230

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                             
Query: 131   gcacttcctcgtggtcacgtacccggcgcagggccacatcaacccggc 178
             |||||||||||| ||| ||||||| |  ||||||||||||||||||||
Sbjct: 65474 gcacttcctcgtcgtcgcgtaccctggccagggccacatcaacccggc 65521
to top
>dbj|AK120020.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-186-C02, full
            insert sequence
          Length = 1581

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 131  gcacttcctcgtggtcacgtacccggcgcagggccacatcaacccggc 178
            |||||||||||| ||| ||||||| |  ||||||||||||||||||||
Sbjct: 1345 gcacttcctcgtcgtcgcgtaccctggccagggccacatcaacccggc 1298
to top
>dbj|AK062590.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-G10, full
           insert sequence
          Length = 1663

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 94/116 (81%)
 Strand = Plus / Plus

                                                                       
Query: 128 gccgcacttcctcgtggtcacgtacccggcgcagggccacatcaacccggcgcgccacct 187
           |||||||||||||||| |||||| ||||   ||||||||||||   ||||||| || |||
Sbjct: 104 gccgcacttcctcgtgctcacgttcccgctccagggccacatcgcgccggcgctccgcct 163

                                                                   
Query: 188 cgcgctgcgcctgctccgcgccacgccgggcgcccgcgtcaccgtctccaccgccg 243
           |||   ||||||||||  |||| | || | ||| | ||||||| ||||||||||||
Sbjct: 164 cgccaggcgcctgctcgccgccgcccccgacgcgctcgtcaccttctccaccgccg 219
to top
>dbj|AB113664.1| Iris hollandica Ih5GT mRNA for anthocyanin 5-O-glucosyltransferase,
           complete cds
          Length = 1568

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 156 gcgcagggccacatcaacccggcgcgccacctcgc 190
           ||||||||||||||||||||||| |||| ||||||
Sbjct: 39  gcgcagggccacatcaacccggcccgccgcctcgc 73
to top
>ref|XM_483068.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1467

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 128 gccgcacttcctcgtggtcacgtacccggcgcagggccacat 169
           ||||||| ||||||| ||  ||||||||||||||||||||||
Sbjct: 75  gccgcacgtcctcgtcgtgccgtacccggcgcagggccacat 116
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                          
Query: 128      gccgcacttcctcgtggtcacgtacccggcgcagggccacat 169
                ||||||| ||||||| ||  ||||||||||||||||||||||
Sbjct: 24136062 gccgcacgtcctcgtcgtgccgtacccggcgcagggccacat 24136103



 Score = 44.1 bits (22), Expect = 0.23
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 142      tggtcacgtacccggcgcagggccac 167
                ||||| ||||||||||||||||||||
Sbjct: 19285644 tggtcccgtacccggcgcagggccac 19285669
to top
>dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0605H02
          Length = 175547

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                      
Query: 128  gccgcacttcctcgtggtcacgtacccggcgcagggccacat 169
            ||||||| ||||||| ||  ||||||||||||||||||||||
Sbjct: 2401 gccgcacgtcctcgtcgtgccgtacccggcgcagggccacat 2442
to top
>dbj|AP004557.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0028A08
          Length = 150818

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                       
Query: 128   gccgcacttcctcgtggtcacgtacccggcgcagggccacat 169
             ||||||| ||||||| ||  ||||||||||||||||||||||
Sbjct: 89548 gccgcacgtcctcgtcgtgccgtacccggcgcagggccacat 89589
to top
>dbj|AP006050.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0021H05
          Length = 159111

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 131   gcacttcctcgtggtcacgtacccggcgcagggccac 167
             |||| ||||||| ||| ||||||||||||||||||||
Sbjct: 59658 gcacgtcctcgtcgtcccgtacccggcgcagggccac 59694



 Score = 42.1 bits (21), Expect = 0.93
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 148  cgtacccggcgcagggccacatcaacccg 176
            |||||||||||||||||||| ||| ||||
Sbjct: 5563 cgtacccggcgcagggccacctcatcccg 5591
to top
>ref|XM_471860.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1479

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 148 cgtacccggcgcagggccacatca 171
           ||||||||||||||||||||||||
Sbjct: 35  cgtacccggcgcagggccacatca 58
to top
>emb|AL731634.4|OSJN00276 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0033P05,
             complete sequence
          Length = 120635

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 148   cgtacccggcgcagggccacatca 171
             ||||||||||||||||||||||||
Sbjct: 57764 cgtacccggcgcagggccacatca 57741



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 148   cgtacccggcgcagggccac 167
             ||||||||||||||||||||
Sbjct: 45150 cgtacccggcgcagggccac 45131
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 148      cgtacccggcgcagggccacatca 171
                ||||||||||||||||||||||||
Sbjct: 15164869 cgtacccggcgcagggccacatca 15164846



 Score = 44.1 bits (22), Expect = 0.23
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 142      tggtcacgtacccggcgcagggccac 167
                ||||| ||||||||||||||||||||
Sbjct: 14830389 tggtcccgtacccggcgcagggccac 14830414



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 148      cgtacccggcgcagggccac 167
                ||||||||||||||||||||
Sbjct: 15152255 cgtacccggcgcagggccac 15152236



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 148      cgtacccggcgcagggccac 167
                ||||||||||||||||||||
Sbjct: 14787161 cgtacccggcgcagggccac 14787142



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 148      cgtacccggcgcagggccac 167
                ||||||||||||||||||||
Sbjct: 14735630 cgtacccggcgcagggccac 14735649



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 148      cgtacccggcgcagggccac 167
                ||||||||||||||||||||
Sbjct: 14723125 cgtacccggcgcagggccac 14723144



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 153     ccggcgcagggccacatcaacccg 176
               ||||||||||||||||| ||||||
Sbjct: 7117783 ccggcgcagggccacatgaacccg 7117760



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 153     ccggcgcagggccacatcaacccg 176
               ||||||||||||||||| ||||||
Sbjct: 6990815 ccggcgcagggccacatgaacccg 6990792
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 46.1 bits (23), Expect = 0.059
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 73       tcgcatcgcatcgcacgcacgca 95
                |||||||||||||||||||||||
Sbjct: 10224788 tcgcatcgcatcgcacgcacgca 10224810



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 150      tacccggcgcagggccacatcaacccgg 177
                |||||| | |||||||||||||||||||
Sbjct: 19919415 tacccgtcccagggccacatcaacccgg 19919442
to top
>dbj|AP005554.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1118_A10
          Length = 95161

 Score = 46.1 bits (23), Expect = 0.059
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 73    tcgcatcgcatcgcacgcacgca 95
             |||||||||||||||||||||||
Sbjct: 25937 tcgcatcgcatcgcacgcacgca 25959
to top
>ref|XM_482293.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1494

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 142 tggtcacgtacccggcgcagggccac 167
           ||||| ||||||||||||||||||||
Sbjct: 65  tggtcccgtacccggcgcagggccac 90
to top
>ref|XM_471830.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1428

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 142 tggtcacgtacccggcgcagggccac 167
           ||||| ||||||||||||||||||||
Sbjct: 65  tggtcccgtacccggcgcagggccac 90
to top
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III,
              complete sequence
          Length = 907057

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 185    cctcgcgctgcgcctgctccgcgccacgcc 214
              ||||||| ||||||||||||||||| ||||
Sbjct: 731502 cctcgcgatgcgcctgctccgcgccccgcc 731473
to top
>emb|AL663021.4|OSJN00218 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041M06,
             complete sequence
          Length = 107014

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 142   tggtcacgtacccggcgcagggccac 167
             ||||| ||||||||||||||||||||
Sbjct: 84327 tggtcccgtacccggcgcagggccac 84352



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 148   cgtacccggcgcagggccac 167
             ||||||||||||||||||||
Sbjct: 41099 cgtacccggcgcagggccac 41080
to top
>dbj|AP004636.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0685B10
          Length = 148544

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 142   tggtcacgtacccggcgcagggccac 167
             ||||| ||||||||||||||||||||
Sbjct: 15087 tggtcccgtacccggcgcagggccac 15112
to top
>dbj|AP003872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1118_A03
          Length = 109873

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 142   tggtcacgtacccggcgcagggccac 167
             ||||| ||||||||||||||||||||
Sbjct: 58657 tggtcccgtacccggcgcagggccac 58682
to top
>ref|NM_208973.1| Eremothecium gossypii ACR218Wp (ACR218W), mRNA
          Length = 4710

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 185 cctcgcgctgcgcctgctccgcgccacgcc 214
           ||||||| ||||||||||||||||| ||||
Sbjct: 70  cctcgcgatgcgcctgctccgcgccccgcc 41
to top
>gb|AY542311.1| Sorghum bicolor clone SB20O07 b1-1, b1-2, putative genetic modifier,
             hypothetical protein, putative NAM protein, putative
             cis-zeatin O-glucosyltransferases, putative small nuclear
             ribonucleoprotein, putative cis-zeatin
             O-glucosyltransferase, putative glutathione peroxidase,
             putative copper-exporting ATPases, putative
             serine/threonine dehydratase, and putative actin
             depolymerizing factor genes, complete cds; and
             hypothetical protein gene, partial cds
          Length = 157237

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 148   cgtacccggcgcagggccacatcaac 173
             |||||||||||||||||||| |||||
Sbjct: 95325 cgtacccggcgcagggccacctcaac 95350
to top
>ref|XM_506982.1| PREDICTED Oryza sativa (japonica cultivar-group), P0627E03.33 mRNA
          Length = 1676

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 148 cgtacccggcgcagggccacatcaacccg 176
           |||||||||||||||| ||||||| ||||
Sbjct: 123 cgtacccggcgcaggggcacatcaccccg 151
to top
>ref|XM_467869.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1659

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 148 cgtacccggcgcagggccacatcaacccg 176
           |||||||||||||||| ||||||| ||||
Sbjct: 126 cgtacccggcgcaggggcacatcaccccg 154
to top
>gb|AC120990.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0040E06, complete sequence
          Length = 160907

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 237   accgccgtctccgcctgccgc 257
             |||||||||||||||||||||
Sbjct: 71342 accgccgtctccgcctgccgc 71322
to top
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16
          Length = 346274

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 176   ggcgcgccacctcgcgctgcgcctg 200
             |||||||||||||| ||||||||||
Sbjct: 32280 ggcgcgccacctcgtgctgcgcctg 32304
to top
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14
          Length = 348014

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 176    ggcgcgccacctcgcgctgcgcctg 200
              |||||||||||||| ||||||||||
Sbjct: 296158 ggcgcgccacctcgtgctgcgcctg 296182
to top
>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12
          Length = 349726

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 176    ggcgcgccacctcgcgctgcgcctg 200
              |||||||||||||| ||||||||||
Sbjct: 267221 ggcgcgccacctcgtgctgcgcctg 267245
to top
>emb|AL732516.6| Mouse DNA sequence from clone RP23-403H17 on chromosome 11 Contains a
             novel gene, complete sequence
          Length = 99659

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 18    acccaccccagtaaggacact 38
             |||||||||||||||||||||
Sbjct: 88852 acccaccccagtaaggacact 88872
to top
>gb|AE012313.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 221
            of 460 of the complete genome
          Length = 12227

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 224  cgtcaccgtctccaccgccgtctcc 248
            ||||||| |||||||||||||||||
Sbjct: 9530 cgtcaccatctccaccgccgtctcc 9554



 Score = 42.1 bits (21), Expect = 0.93
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 224  cgtcaccgtctccaccgccgtctcc 248
            ||||||| |||||||||||||||||
Sbjct: 3778 cgtcaccatctccaccgccgtctcc 3754



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 229  ccgtctccaccgccgtctcc 248
            ||||||||||||||||||||
Sbjct: 9583 ccgtctccaccgccgtctcc 9602



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 229  ccgtctccaccgccgtctcc 248
            ||||||||||||||||||||
Sbjct: 9571 ccgtctccaccgccgtctcc 9590



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 229  ccgtctccaccgccgtctcc 248
            ||||||||||||||||||||
Sbjct: 3737 ccgtctccaccgccgtctcc 3718



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 229  ccgtctccaccgccgtctcc 248
            ||||||||||||||||||||
Sbjct: 3725 ccgtctccaccgccgtctcc 3706
to top
>gb|AC016780.6| Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar
             Nipponbare Clone OSJNBa0061K21 From Chromosome 10,
             complete sequence
          Length = 112721

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 229   ccgtctccaccgccgtctccgcctgccgc 257
             ||||||||||||||||| ||||| |||||
Sbjct: 33014 ccgtctccaccgccgtcgccgcccgccgc 32986
to top
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 224     cgtcaccgtctccaccgccgtctcc 248
               ||||||| |||||||||||||||||
Sbjct: 2534600 cgtcaccatctccaccgccgtctcc 2534576



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 229     ccgtctccaccgccgtctcc 248
               ||||||||||||||||||||
Sbjct: 2534559 ccgtctccaccgccgtctcc 2534540



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 229     ccgtctccaccgccgtctcc 248
               ||||||||||||||||||||
Sbjct: 2534547 ccgtctccaccgccgtctcc 2534528
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 229      ccgtctccaccgccgtctccgcctgccgc 257
                ||||||||||||||||| ||||| |||||
Sbjct: 14093376 ccgtctccaccgccgtcgccgcccgccgc 14093348
to top
>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0063H02
          Length = 152326

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 148    cgtacccggcgcagggccacatcaacccg 176
              |||||||||||||||||||| ||| ||||
Sbjct: 128633 cgtacccggcgcagggccacctcatcccg 128661
to top
>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0627E03
          Length = 159861

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 148    cgtacccggcgcagggccacatcaacccg 176
              |||||||||||||||| ||||||| ||||
Sbjct: 120392 cgtacccggcgcaggggcacatcaccccg 120420



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 148    cgtacccggcgcagggccac 167
              ||||||||||||||||||||
Sbjct: 103266 cgtacccggcgcagggccac 103247
to top
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence
          Length = 144651

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 229    ccgtctccaccgccgtctccgcctgccgc 257
              ||||||||||||||||| ||||| |||||
Sbjct: 109505 ccgtctccaccgccgtcgccgcccgccgc 109477
to top
>dbj|AK104985.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-F12, full
           insert sequence
          Length = 1677

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 148 cgtacccggcgcagggccacatcaacccg 176
           |||||||||||||||| ||||||| ||||
Sbjct: 123 cgtacccggcgcaggggcacatcaccccg 151
to top
>dbj|AK073587.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052B15, full
           insert sequence
          Length = 1659

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 148 cgtacccggcgcagggccacatcaacccg 176
           |||||||||||||||| ||||||| ||||
Sbjct: 126 cgtacccggcgcaggggcacatcaccccg 154
to top
>dbj|AK063413.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-B06, full
           insert sequence
          Length = 1196

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 237 accgccgtctccgcctgccgc 257
           |||||||||||||||||||||
Sbjct: 89  accgccgtctccgcctgccgc 109
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 229      ccgtctccaccgccgtctccgcctgccgc 257
                ||||||||||||||||| ||||| |||||
Sbjct: 14101618 ccgtctccaccgccgtcgccgcccgccgc 14101590
to top
>gb|U10884.1|BPU10884 Bacteriophage phi-Lf adsorption protein (III) gene, complete cds
          Length = 1171

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 224 cgtcaccgtctccaccgccgtctcc 248
           ||||||| |||||||||||||||||
Sbjct: 797 cgtcaccatctccaccgccgtctcc 773



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 229 ccgtctccaccgccgtctcc 248
           ||||||||||||||||||||
Sbjct: 756 ccgtctccaccgccgtctcc 737



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 229 ccgtctccaccgccgtctcc 248
           ||||||||||||||||||||
Sbjct: 744 ccgtctccaccgccgtctcc 725
to top
>ref|NM_127536.2| Arabidopsis thaliana protein binding AT2G19780 mRNA, complete cds
          Length = 1397

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 cgtcaccgtctccaccgccg 243
           ||||||||||||||||||||
Sbjct: 165 cgtcaccgtctccaccgccg 146
to top
>ref|XM_474839.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1389

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 153 ccggcgcagggccacatcaacccg 176
           ||||||||||||||||| ||||||
Sbjct: 61  ccggcgcagggccacatgaacccg 84
to top
>ref|XM_474827.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1008

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 153 ccggcgcagggccacatcaacccg 176
           ||||||||||||||||| ||||||
Sbjct: 61  ccggcgcagggccacatgaacccg 84
to top
>ref|XM_471827.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1494

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 148 cgtacccggcgcagggccac 167
           ||||||||||||||||||||
Sbjct: 53  cgtacccggcgcagggccac 72
to top
>ref|XM_471859.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1491

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 148 cgtacccggcgcagggccac 167
           ||||||||||||||||||||
Sbjct: 50  cgtacccggcgcagggccac 69
to top
>ref|XM_471822.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1431

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 148 cgtacccggcgcagggccac 167
           ||||||||||||||||||||
Sbjct: 8   cgtacccggcgcagggccac 27
to top
>ref|XM_471823.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1491

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 148 cgtacccggcgcagggccac 167
           ||||||||||||||||||||
Sbjct: 50  cgtacccggcgcagggccac 69
to top
>ref|XM_467864.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1597

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 148 cgtacccggcgcagggccac 167
           ||||||||||||||||||||
Sbjct: 59  cgtacccggcgcagggccac 78
to top
>ref|XM_469560.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 399

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 238 ccgccgtctccgcctgccgc 257
           ||||||||||||||||||||
Sbjct: 116 ccgccgtctccgcctgccgc 97
to top
>ref|XM_477378.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 555

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 232 tctccaccgccgtctccgcc 251
           ||||||||||||||||||||
Sbjct: 341 tctccaccgccgtctccgcc 360
to top
>gb|AF377946.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone
              OSJNBa0031O09, complete sequence
          Length = 161339

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 72     ctcgcatcgcatcgcacgcacgca 95
              ||||| ||||||||||||||||||
Sbjct: 147748 ctcgcgtcgcatcgcacgcacgca 147771
to top
>gb|AC147426.2| Oryza sativa chromosome 3  B1377B10 genomic sequence, complete sequence
          Length = 184366

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 72    ctcgcatcgcatcgcacgcacgca 95
             ||||| ||||||||||||||||||
Sbjct: 65731 ctcgcgtcgcatcgcacgcacgca 65754
to top
>ref|XM_613872.2| PREDICTED: Bos taurus similar to teratocarcinoma expressed, serine
           rich (LOC534193), mRNA
          Length = 894

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 110 ggagcgcgtgggggaggcgccgcacttcctcg 141
           ||||||||||||||||||| ||  ||||||||
Sbjct: 196 ggagcgcgtgggggaggcggcgtgcttcctcg 227
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 72       ctcgcatcgcatcgcacgcacgca 95
                ||||| ||||||||||||||||||
Sbjct: 28882436 ctcgcgtcgcatcgcacgcacgca 28882459



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 238      ccgccgtctccgcctgccgc 257
                ||||||||||||||||||||
Sbjct: 28713378 ccgccgtctccgcctgccgc 28713397



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 233      ctccaccgccgtctccgcct 252
                ||||||||||||||||||||
Sbjct: 20377382 ctccaccgccgtctccgcct 20377401
to top
>emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genome; segment 6/16
          Length = 346879

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 177    gcgcgccacctcgcgctgcg 196
              ||||||||||||||||||||
Sbjct: 301658 gcgcgccacctcgcgctgcg 301639
to top
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29
          Length = 313800

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 148    cgtacccggcgcagggccac 167
              ||||||||||||||||||||
Sbjct: 183526 cgtacccggcgcagggccac 183507
to top
>emb|AL606590.3|OSJN00031 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0052O21,
              complete sequence
          Length = 166475

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 153    ccggcgcagggccacatcaacccg 176
              ||||||||||||||||| ||||||
Sbjct: 138974 ccggcgcagggccacatgaacccg 138951



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 153   ccggcgcagggccacatcaacccg 176
             ||||||||||||||||| ||||||
Sbjct: 12006 ccggcgcagggccacatgaacccg 11983
to top
>gb|AC090433.10| Chlamydomonas reinhardtii clone cr-19b23, complete sequence
          Length = 118183

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 179   gcgccacctcgcgctgcgcctgctccgc 206
             ||||| ||||||||||||||| ||||||
Sbjct: 29452 gcgccgcctcgcgctgcgcctcctccgc 29479
to top
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 170    caacccggcgcgccacctcgcgct 193
              ||||| ||||||||||||||||||
Sbjct: 968379 caacctggcgcgccacctcgcgct 968402
to top
>gb|AC005169.3| Arabidopsis thaliana chromosome 2 clone F6F22 map mi148, complete
             sequence
          Length = 126386

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   cgtcaccgtctccaccgccg 243
             ||||||||||||||||||||
Sbjct: 99485 cgtcaccgtctccaccgccg 99466
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 232     tctccaccgccgtctccgcc 251
               ||||||||||||||||||||
Sbjct: 9964673 tctccaccgccgtctccgcc 9964654
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 72       ctcgcatcgcatcgcacgcacgca 95
                ||||| ||||||||||||||||||
Sbjct: 28973858 ctcgcgtcgcatcgcacgcacgca 28973881



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 238      ccgccgtctccgcctgccgc 257
                ||||||||||||||||||||
Sbjct: 28804702 ccgccgtctccgcctgccgc 28804721



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 233      ctccaccgccgtctccgcct 252
                ||||||||||||||||||||
Sbjct: 20370411 ctccaccgccgtctccgcct 20370430
to top
>emb|BX818896.1|CNS0A9TN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB24ZB02 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1355

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 cgtcaccgtctccaccgccg 243
           ||||||||||||||||||||
Sbjct: 137 cgtcaccgtctccaccgccg 118
to top
>gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B24 genomic sequence, complete
             sequence
          Length = 152883

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 233   ctccaccgccgtctccgcct 252
             ||||||||||||||||||||
Sbjct: 21682 ctccaccgccgtctccgcct 21701
to top
>gb|BT005020.1| Arabidopsis thaliana clone U20712 putative disease resistance
           protein (At2g19780) mRNA, complete cds
          Length = 1240

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 cgtcaccgtctccaccgccg 243
           ||||||||||||||||||||
Sbjct: 130 cgtcaccgtctccaccgccg 111
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 218     cgcccgcgtcaccgtctccaccgc 241
               |||||| |||||||||||||||||
Sbjct: 2055111 cgcccgggtcaccgtctccaccgc 2055088
to top
>gb|BT004135.1| Arabidopsis thaliana clone RAFL15-20-F01 (R20712) putative disease
           resistance protein (At2g19780) mRNA, complete cds
          Length = 1440

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 cgtcaccgtctccaccgccg 243
           ||||||||||||||||||||
Sbjct: 168 cgtcaccgtctccaccgccg 149
to top
>gb|AC091532.13| Oryza sativa chromosome 3 BAC OSJNBa0078A17 genomic sequence, complete
             sequence
          Length = 147344

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   ccgccgtctccgcctgccgc 257
             ||||||||||||||||||||
Sbjct: 20359 ccgccgtctccgcctgccgc 20378
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 183     cacctcgcgctgcgcctgctccgc 206
               |||||||||||||||| |||||||
Sbjct: 2446258 cacctcgcgctgcgccagctccgc 2446235
to top
>dbj|AP006173.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0217C03
          Length = 58309

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 150   tacccggcgcagggccacatcaacccgg 177
             |||||| | |||||||||||||||||||
Sbjct: 26501 tacccgtcccagggccacatcaacccgg 26528
to top
>dbj|AP005201.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0685B06
          Length = 140293

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 232   tctccaccgccgtctccgcc 251
             ||||||||||||||||||||
Sbjct: 94205 tctccaccgccgtctccgcc 94186
to top
>dbj|AK119530.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-C07, full
           insert sequence
          Length = 1673

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 148 cgtacccggcgcagggccac 167
           ||||||||||||||||||||
Sbjct: 148 cgtacccggcgcagggccac 167
to top
>emb|X14172.1|OSPHY18 Rice phy 18 gene for phytochrome
          Length = 9979

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 72   ctcgcatcgcatcgcacgcacgca 95
            ||||| ||||||||||||||||||
Sbjct: 1781 ctcgcgtcgcatcgcacgcacgca 1758
to top
>dbj|AK110892.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-A01, full
           insert sequence
          Length = 1521

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 153 ccggcgcagggccacatcaacccg 176
           ||||||||||||||||| ||||||
Sbjct: 95  ccggcgcagggccacatgaacccg 118
to top
>dbj|AK105966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-E07, full
           insert sequence
          Length = 1665

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 148 cgtacccggcgcagggccac 167
           ||||||||||||||||||||
Sbjct: 145 cgtacccggcgcagggccac 164
to top
>dbj|AK105783.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-G07, full
           insert sequence
          Length = 1640

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 148 cgtacccggcgcagggccac 167
           ||||||||||||||||||||
Sbjct: 89  cgtacccggcgcagggccac 108
to top
>dbj|AK099276.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105H10, full
           insert sequence
          Length = 2393

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 233 ctccaccgccgtctccgcct 252
           ||||||||||||||||||||
Sbjct: 534 ctccaccgccgtctccgcct 553
to top
>dbj|AK070389.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048I16, full
           insert sequence
          Length = 2466

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 233 ctccaccgccgtctccgcct 252
           ||||||||||||||||||||
Sbjct: 607 ctccaccgccgtctccgcct 626
to top
>dbj|AK066301.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059M20, full
           insert sequence
          Length = 1596

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 148 cgtacccggcgcagggccac 167
           ||||||||||||||||||||
Sbjct: 58  cgtacccggcgcagggccac 77
to top
>emb|AL606443.3|OSJN00008 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026L04,
              complete sequence
          Length = 129563

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 148    cgtacccggcgcagggccac 167
              ||||||||||||||||||||
Sbjct: 126815 cgtacccggcgcagggccac 126796



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 148   cgtacccggcgcagggccac 167
             ||||||||||||||||||||
Sbjct: 75284 cgtacccggcgcagggccac 75303



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 148   cgtacccggcgcagggccac 167
             ||||||||||||||||||||
Sbjct: 62779 cgtacccggcgcagggccac 62798


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,474,888
Number of Sequences: 3902068
Number of extensions: 1474888
Number of successful extensions: 36772
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 35455
Number of HSP's gapped (non-prelim): 1310
length of query: 281
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 259
effective length of database: 17,147,199,772
effective search space: 4441124740948
effective search space used: 4441124740948
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top