>HYUC_PSESN (Q01264) Hydantoin utilization protein C (ORF4)|
          Length = 414

 Score =  106 bits (264), Expect = 2e-23
 Identities = 57/130 (43%), Positives = 78/130 (60%)
 Frame = +3

Query: 27  YVEVHLEQGPVLEAFRYPLGVVNGIAGQTRLKVIVDGSQGHAGTVPMKLRRDPMVAAAEL 206
           Y E+H+EQGP LE   YP+G+V+GIAG +  KV + G  GHAGTVPM LR+DP+V AAE+
Sbjct: 191 YFEMHIEQGPYLEKNNYPIGIVSGIAGPSWFKVRLVGEAGHAGTVPMSLRKDPLVGAAEV 250

Query: 207 VVTLESLCKEPSRFLTYDEDCGCFTEESLAGLVCTVGELLTWPSVSNVIPGQVNFTVDIR 386
           +  +E+LC                  +  A  V TVG +  +P  SN+IP  V FT+DIR
Sbjct: 251 IKEVETLC----------------MNDPNAPTVGTVGRIAAFPGGSNIIPESVEFTLDIR 294

Query: 387 AMDDQVRETI 416
            ++ + R  I
Sbjct: 295 DIELERRNKI 304

>AMAB2_BACST (Q53389) N-carbamoyl-L-amino acid hydrolase (EC 3.5.1.87)|
           (L-carbamoylase)
          Length = 409

 Score = 97.4 bits (241), Expect = 1e-20
 Identities = 52/136 (38%), Positives = 76/136 (55%)
 Frame = +3

Query: 9   PESVGSYVEVHLEQGPVLEAFRYPLGVVNGIAGQTRLKVIVDGSQGHAGTVPMKLRRDPM 188
           P +V +YVE+H+EQG VLE    P+G+V GIAG   +K  ++G   HAG  PM LRRDPM
Sbjct: 179 PGTVKAYVELHIEQGRVLEETGLPVGIVTGIAGLIWVKFTIEGKAEHAGATPMSLRRDPM 238

Query: 189 VAAAELVVTLESLCKEPSRFLTYDEDCGCFTEESLAGLVCTVGELLTWPSVSNVIPGQVN 368
            AAA++++ +E   +                       V TVG+L  +P   NVIP +V 
Sbjct: 239 AAAAQIIIVIEEEARRTGT------------------TVGTVGQLHVYPGGINVIPERVE 280

Query: 369 FTVDIRAMDDQVRETI 416
           F +D+R +  +VR+ +
Sbjct: 281 FVLDLRDLKAEVRDQV 296

>AMAB1_BACST (P37113) N-carbamoyl-L-amino acid hydrolase (EC 3.5.1.87)|
           (L-carbamoylase)
          Length = 409

 Score = 95.5 bits (236), Expect = 4e-20
 Identities = 52/136 (38%), Positives = 75/136 (55%)
 Frame = +3

Query: 9   PESVGSYVEVHLEQGPVLEAFRYPLGVVNGIAGQTRLKVIVDGSQGHAGTVPMKLRRDPM 188
           P +V +YVE+H+EQG VLE    P+G+V GIAG   +K  + G   HAG  PM LRRDPM
Sbjct: 179 PGTVKAYVELHIEQGRVLEEAGLPVGIVTGIAGLIWVKFTIAGPAEHAGATPMSLRRDPM 238

Query: 189 VAAAELVVTLESLCKEPSRFLTYDEDCGCFTEESLAGLVCTVGELLTWPSVSNVIPGQVN 368
            AAA++++ +E   +                       V TVG+L  +P   NVIP +V 
Sbjct: 239 AAAAQIIIVIEEEARRTGT------------------TVGTVGQLHVYPGGINVIPERVE 280

Query: 369 FTVDIRAMDDQVRETI 416
           F +D+R +  +VR+ +
Sbjct: 281 FVLDLRDLKAEVRDQV 296

>ALLC_BACSU (O32149) Allantoate amidohydrolase (EC 3.5.3.-)|
          Length = 412

 Score = 82.8 bits (203), Expect = 3e-16
 Identities = 50/131 (38%), Positives = 72/131 (54%)
 Frame = +3

Query: 18  VGSYVEVHLEQGPVLEAFRYPLGVVNGIAGQTRLKVIVDGSQGHAGTVPMKLRRDPMVAA 197
           + ++VE+H+EQG  LE     LG+V  IAGQ R  V ++G   HAGT  MK R+DP+ A+
Sbjct: 186 ISAFVELHIEQGKTLEMSGRDLGIVTSIAGQRRYLVTLEGECNHAGTTSMKWRKDPLAAS 245

Query: 198 AELVVTLESLCKEPSRFLTYDEDCGCFTEESLAGLVCTVGELLTWPSVSNVIPGQVNFTV 377
           + ++  L          L  DE      +E    L  T G++   P+V+NVIPG+V F++
Sbjct: 246 SRIIHEL---------LLRSDE----LPDE----LRLTCGKITAEPNVANVIPGRVQFSI 288

Query: 378 DIRAMDDQVRE 410
           DIR     V E
Sbjct: 289 DIRHQHQHVLE 299

>ALLC_ECOLI (P77425) Allantoate amidohydrolase (EC 3.5.3.-)|
          Length = 411

 Score = 74.7 bits (182), Expect = 8e-14
 Identities = 45/131 (34%), Positives = 64/131 (48%)
 Frame = +3

Query: 12  ESVGSYVEVHLEQGPVLEAFRYPLGVVNGIAGQTRLKVIVDGSQGHAGTVPMKLRRDPMV 191
           + + ++VE+H+EQG VLE+    +GVVN I GQ R  V ++G   HAGT PM  RRD + 
Sbjct: 181 QDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVY 240

Query: 192 AAAELVVTLESLCKEPSRFLTYDEDCGCFTEESLAGLVCTVGELLTWPSVSNVIPGQVNF 371
           A + +        K                      LV T G++   P+  NV+PG+  F
Sbjct: 241 AFSRICHQSVEKAKRMG-----------------DPLVLTFGKVEPRPNTVNVVPGKTTF 283

Query: 372 TVDIRAMDDQV 404
           T+D R  D  V
Sbjct: 284 TIDCRHTDAAV 294

>Y588_HAEIN (Q57051) Protein HI0588|
          Length = 411

 Score = 68.6 bits (166), Expect = 6e-12
 Identities = 41/130 (31%), Positives = 58/130 (44%)
 Frame = +3

Query: 27  YVEVHLEQGPVLEAFRYPLGVVNGIAGQTRLKVIVDGSQGHAGTVPMKLRRDPMVAAAEL 206
           + E+H+EQGP LE     +GVV GIA   R  V + G   H+G   M  R D ++  +EL
Sbjct: 186 FFELHIEQGPRLENEGKTIGVVTGIAAPIRAIVKIKGQADHSGATAMHYRHDALLGGSEL 245

Query: 207 VVTLESLCKEPSRFLTYDEDCGCFTEESLAGLVCTVGELLTWPSVSNVIPGQVNFTVDIR 386
            + +E    +                      V TVG +   P V NV+PG     VDIR
Sbjct: 246 SLAIERAAIQAGH-----------------STVATVGNITAKPGVMNVVPGYCELLVDIR 288

Query: 387 AMDDQVRETI 416
               Q R+++
Sbjct: 289 GTHVQARDSV 298

>AMAA_BACST (P37112) N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14)|
           (L-aminoacylase)
          Length = 370

 Score = 32.3 bits (72), Expect = 0.45
 Identities = 33/135 (24%), Positives = 63/135 (46%), Gaps = 2/135 (1%)
 Frame = +3

Query: 18  VGSYVEVHLEQGPVLEAFRYPLGVVNG--IAGQTRLKVIVDGSQGHAGTVPMKLRRDPMV 191
           +G+++   LE+G +        G+V G  +A   R  + + G  GH G +P +   D + 
Sbjct: 162 IGTHLWSPLERGKI--------GIVYGPMMAAPDRFFIRIIGKGGH-GAMPHQTI-DAIA 211

Query: 192 AAAELVVTLESLCKEPSRFLTYDEDCGCFTEESLAGLVCTVGELLTWPSVSNVIPGQVNF 371
             A++V  L+ +    SR++           + L  LV +V + +   +  NV+PG+V  
Sbjct: 212 IGAQVVTNLQHIV---SRYV-----------DPLEPLVLSVTQFVAG-TAHNVLPGEVEI 256

Query: 372 TVDIRAMDDQVRETI 416
              +R  D+ +R T+
Sbjct: 257 QGTVRTFDETLRRTV 271

>ARGD_NEUCR (Q9P3I3) Acetylornithine aminotransferase, mitochondrial precursor|
           (EC 2.6.1.11) (ACOAT)
          Length = 461

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
 Frame = +3

Query: 54  PVLEAFRYPLGVVNGIAGQTRL------KVIVDGSQGHAGTVPMKLRRDPMVAAAELVVT 215
           P++  F+  +G  N IA    L       VIV+  QG  G +P         A  E +V 
Sbjct: 218 PMVPGFK--VGTYNDIAAIPSLVTEKTCSVIVEPIQGEGGVMP---------ATEEFLVA 266

Query: 216 LESLCKEPSRFLTYDE-DCG 272
           L   C+E    L YDE  CG
Sbjct: 267 LGKRCREVGALLHYDEIQCG 286

>GRB7_MOUSE (Q03160) Growth factor receptor-bound protein 7 (GRB7 adapter|
           protein) (Epidermal growth factor receptor GRB-7)
          Length = 535

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -3

Query: 231 CTGSPVSPPALQLQPSDHGAISLEPSQHALGNRLLLPSI 115
           C+GS +S    + QP  HG IS E SQ  +G + L+  +
Sbjct: 419 CSGSSLSAAIHRTQPWFHGRISREESQRLIGQQGLVDGV 457

>GLGA2_AGRT5 (Q8UK38) Glycogen synthase 2 (EC 2.4.1.21) (Starch [bacterial|
           glycogen] synthase 2)
          Length = 509

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +1

Query: 19  WGVTLRFTWNKGLSWKPSVIPLAS*MESQGR 111
           +GV  R TW KG+   P V+PL   +E +GR
Sbjct: 291 FGVVSRLTWQKGIDLLPHVVPLI--IERKGR 319

>ATS19_HUMAN (Q8TE59) ADAMTS-19 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase with thrombospondin motifs 19)
           (ADAM-TS 19) (ADAM-TS19)
          Length = 1207

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 15/88 (17%)
 Frame = -3

Query: 222 SPVSPPALQLQPSDHGAISLEPSQHAL--GNRLLL--PSIASALRFHLRRQGD------- 76
           SP +P + Q  P      S  P+QHA   G+ +LL  P+ +  L   LRR G        
Sbjct: 133 SPGAPASWQPPPPPQPPPSPPPAQHAEPDGDEVLLRIPAFSRDLYLLLRRDGRFLAPRFA 192

Query: 75  ----NGRLPGQALVPSEPQRNSPPTPGC 4
                   PG     S PQ  +PP  GC
Sbjct: 193 VEQRPNPGPGPTGAASAPQPPAPPDAGC 220

>AMHX_BACSU (P54983) Amidohydrolase amhX (EC 3.5.1.-) (Aminoacylase)|
          Length = 389

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 10/25 (40%), Positives = 19/25 (76%)
 Frame = +3

Query: 342 SNVIPGQVNFTVDIRAMDDQVRETI 416
           SN+IPG+ +F++D+RA  ++  E +
Sbjct: 230 SNIIPGKASFSLDLRAQTNEAMEAL 254

>KCNA5_RABIT (P50638) Potassium voltage-gated channel subfamily A member 5|
           (Voltage-gated potassium channel subunit Kv1.5)
          Length = 598

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +2

Query: 155 DGSNEIAP*SDGCSCRAGGDTGE 223
           DGS E AP   GCS R G + GE
Sbjct: 37  DGSQEPAPRGRGCSARRGAEPGE 59

>CBPA_PSESM (Q87VN8) Curved DNA-binding protein|
          Length = 314

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = -3

Query: 171 ISLEPSQHALGNRLLLPSIASALRFHLRRQGDNG---RLPGQALVPSEPQR 28
           + L P + ALG ++ +P++ S L   +R    NG   R+ G  L+    +R
Sbjct: 224 VPLAPWEAALGTKVAVPTLTSRLNLTIRPDSQNGQRLRIKGNGLMNKSGER 274

>AMPD2_HUMAN (Q01433) AMP deaminase 2 (EC 3.5.4.6) (AMP deaminase isoform L)|
          Length = 879

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = -3

Query: 222 SPVSPPALQLQPSDHGAISLEPSQHALGNRLLLPSIASALRFHLRRQGD 76
           +PV PPAL+  P +H   S  P    LG R+    +   +  + RR+ D
Sbjct: 295 APVHPPALEQHPYEHCEPSTMPGDLGLGLRM----VRGVVHVYTRREPD 339

>MPA5A_LOLPR (Q40240) Major pollen allergen Lol p 5a precursor (Lol p Va) (Lol p|
           Ib)
          Length = 308

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +2

Query: 47  TRACPGSLPLSPWRRKWNRRADAIEGNSRRFPRACW 154
           T A P + P   WR   +RRA+A  G  R   R  W
Sbjct: 37  TPATPAATPAGGWREGDDRRAEAAGGRQRLASRQPW 72

>VG16_BPML5 (Q05222) Probable head assembly protein (Scaffold protein) (Gp16)|
          Length = 172

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
 Frame = +3

Query: 12  ESVGSYVEV--HLEQGPVLEAFRYPLGVVNGIAGQTRLKVIVDGSQGHAGTVPMKLRRDP 185
           + V ++VE+    ++  + E+ +  L +V G   +T      D SQG  G  P+ L  DP
Sbjct: 101 DKVRAFVEILEGNDRDSIAESVKSRLELVGGFGNKTPSPAF-DPSQGRGGKPPIPLNGDP 159

Query: 186 MVAAAELVVTLE 221
           ++ A +  V ++
Sbjct: 160 ILEAIKAAVGIK 171

>ASR1_YEAST (Q06834) Alcohol-sensitive RING finger protein 1|
          Length = 288

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = +3

Query: 222 SLCKEP--SRFLTYDEDC-GCFTEESLAGLVCTVGELLTW 332
           S+C +   SR   Y +DC   + E  L GL C VG+  TW
Sbjct: 122 SICGDTDVSRLSLYCQDCEAIYHETCLRGLACEVGDRNTW 161

>ILL2_ARATH (P54970) IAA-amino acid hydrolase ILR1-like 2 precursor (EC|
           3.5.1.-)
          Length = 439

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 27/112 (24%), Positives = 48/112 (42%), Gaps = 6/112 (5%)
 Frame = +3

Query: 99  IAGQTRLKVIVDGSQGHAGTVPMKLRRDPMVAAAELVVTLESLCKEPSRFLTYDEDCGCF 278
           +AG    + ++ G  GHA      +  DP+VAA+ +V++L+ L    +            
Sbjct: 215 LAGAGVFEAVITGKGGHAAIPQHTI--DPVVAASSIVLSLQQLVSRET------------ 260

Query: 279 TEESLAGLVCTVGELLTWPSVSNVIPGQVNFTVDIRA------MDDQVRETI 416
             + L   V TV + +   +  NVIP  +     +RA      +  +V+E I
Sbjct: 261 --DPLDSKVVTVSK-VNGGNAFNVIPDSITIGGTLRAFTGFTQLQQRVKEVI 309

>AMPD2_MOUSE (Q9DBT5) AMP deaminase 2 (EC 3.5.4.6)|
          Length = 798

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -3

Query: 222 SPVSPPALQLQPSDHGAISLEPSQHALGNRLLLPSIASALRFHLRRQGD 76
           +PV PPAL+  P +H   S  P    LG R+    +   +  + RR  D
Sbjct: 215 APVHPPALEQHPYEHCEPSAMPGDLGLGLRM----VRGVVHVYTRRDPD 259

>PHLPP_MOUSE (Q8CHE4) PH domain leucine-rich repeat-containing protein|
           phosphatase (EC 3.1.3.16) (PH domain leucine-rich repeat
           protein phosphatase) (Pleckstrin homology
           domain-containing family E protein 1) (Suprachiasmatic
           nucleus circadian oscillatory
          Length = 1687

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 21/75 (28%), Positives = 28/75 (37%)
 Frame = -3

Query: 234 LCTGSPVSPPALQLQPSDHGAISLEPSQHALGNRLLLPSIASALRFHLRRQGDNGRLPGQ 55
           L  G P SPP      SD  + SL PS  ++ +RL   S              +  L   
Sbjct: 297 LFAGGPGSPPRAPRPASDTESFSLSPSAESVSDRLDPYSSGGG-----GSSSSSEELEAD 351

Query: 54  ALVPSEPQRNSPPTP 10
             +P  P R + P P
Sbjct: 352 PAMPHRPGRPAQPRP 366

>MDL4_PRUSE (O82784) (R)-mandelonitrile lyase 4 precursor (EC 4.1.2.10)|
           (Hydroxynitrile lyase 4) ((R)-oxynitrilase 4)
          Length = 574

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 8/39 (20%)
 Frame = -2

Query: 175 RNFIGTVPACPWEPSTIT--------FNRVCPAIPFTTP 83
           RNFI  +P  P EPST+T        +     ++PF TP
Sbjct: 329 RNFINILPPNPIEPSTVTVLGITSDFYQCSLSSLPFDTP 367

>ILL1_ARATH (P54969) IAA-amino acid hydrolase ILR1-like 1 precursor (EC|
           3.5.1.-)
          Length = 438

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = +3

Query: 99  IAGQTRLKVIVDGSQGHAGTVPMKLRRDPMVAAAELVVTLESL 227
           +AG    + ++ G  GHA      +  DP+VAA+ +V++L+ L
Sbjct: 214 MAGAGAFEAVITGKGGHAAIPQHTI--DPVVAASSIVLSLQHL 254

>FA44B_XENLA (Q6DFL2) Protein FAM44B|
          Length = 169

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 14/43 (32%), Positives = 17/43 (39%)
 Frame = -3

Query: 138 NRLLLPSIASALRFHLRRQGDNGRLPGQALVPSEPQRNSPPTP 10
           N +  P I  A+  +L  Q      P     P EPQ   PP P
Sbjct: 122 NHIFRPQIEKAIHEYLTAQTKEDSAPPLPPGPPEPQEQEPPEP 164


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,090,779
Number of Sequences: 219361
Number of extensions: 1175953
Number of successful extensions: 4042
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4034
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)