ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast48h11 |
|---|---|
| Clone Library Name | barley_pub |
>GRP2_NICSY (P27484) Glycine-rich protein 2| Length = 214 Score = 78.2 bits (191), Expect = 5e-15 Identities = 33/51 (64%), Positives = 43/51 (84%) Frame = +3 Query: 69 GERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 G+R KGTVKWF+ KGFGFI+P+DG +DLFVHQS I+++G+RSL E + VE Sbjct: 6 GQRAKGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVE 56
>GRP2B_ARATH (Q38896) Glycine-rich protein 2b (AtGRP2b)| Length = 201 Score = 76.3 bits (186), Expect = 2e-14 Identities = 33/51 (64%), Positives = 42/51 (82%) Frame = +3 Query: 69 GERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 G+R KGTVKWF+ KGFGFI+P DG DDLFVHQS+I+++G+RSL + VE Sbjct: 12 GDRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVE 62
>CSPE_BUCBP (Q89A90) Cold shock-like protein cspE (CSP-E)| Length = 68 Score = 71.6 bits (174), Expect = 5e-13 Identities = 30/49 (61%), Positives = 42/49 (85%) Frame = +3 Query: 75 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 ++KG VKWFN +KGFGFI+PEDGS D+FVH SAI+++G+++L+E VE Sbjct: 2 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNGFKTLSEGQSVE 50
>CAPA_PSEFR (P72188) Cold shock protein capA (Cold acclimation protein A)| (C7.0) (Fragment) Length = 64 Score = 70.9 bits (172), Expect = 9e-13 Identities = 31/51 (60%), Positives = 38/51 (74%) Frame = +3 Query: 66 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 M +R GTVKWFN KGFGFI+P+ G DDLFVH AI++DG++SL E V Sbjct: 1 MSQRQSGTVKWFNDEKGFGFITPQGGGDDLFVHFKAIESDGFKSLKEGQTV 51
>CSPE_BUCAP (P63238) Cold shock-like protein cspE (CSP-E)| Length = 68 Score = 70.5 bits (171), Expect = 1e-12 Identities = 30/49 (61%), Positives = 41/49 (83%) Frame = +3 Query: 75 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 ++KG VKWFN +KGFGFI+PEDGS D+FVH SAI+++G+++L E VE Sbjct: 2 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNGFKTLAEGQSVE 50
>CSPE_BUCAI (P63237) Cold shock-like protein cspE (CSP-E)| Length = 68 Score = 70.5 bits (171), Expect = 1e-12 Identities = 30/49 (61%), Positives = 41/49 (83%) Frame = +3 Query: 75 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 ++KG VKWFN +KGFGFI+PEDGS D+FVH SAI+++G+++L E VE Sbjct: 2 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNGFKTLAEGQSVE 50
>CSPG_SHIFL (P0A981) Cold shock-like protein cspG (CPS-G)| Length = 70 Score = 70.1 bits (170), Expect = 1e-12 Identities = 30/52 (57%), Positives = 41/52 (78%) Frame = +3 Query: 66 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 M ++ G VKWFN KGFGFI+P+DGS D+FVH +AI+++ +R+LNEN VE Sbjct: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVE 52
>CSPG_ECOLI (P0A978) Cold shock-like protein cspG (CPS-G)| Length = 70 Score = 70.1 bits (170), Expect = 1e-12 Identities = 30/52 (57%), Positives = 41/52 (78%) Frame = +3 Query: 66 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 M ++ G VKWFN KGFGFI+P+DGS D+FVH +AI+++ +R+LNEN VE Sbjct: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVE 52
>CSPG_ECOL6 (P0A979) Cold shock-like protein cspG (CPS-G)| Length = 70 Score = 70.1 bits (170), Expect = 1e-12 Identities = 30/52 (57%), Positives = 41/52 (78%) Frame = +3 Query: 66 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 M ++ G VKWFN KGFGFI+P+DGS D+FVH +AI+++ +R+LNEN VE Sbjct: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVE 52
>CSPG_ECO57 (P0A980) Cold shock-like protein cspG (CPS-G)| Length = 70 Score = 70.1 bits (170), Expect = 1e-12 Identities = 30/52 (57%), Positives = 41/52 (78%) Frame = +3 Query: 66 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 M ++ G VKWFN KGFGFI+P+DGS D+FVH +AI+++ +R+LNEN VE Sbjct: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVE 52
>CSPJ_SALTY (P39818) Cold shock-like protein cspJ| Length = 70 Score = 69.7 bits (169), Expect = 2e-12 Identities = 31/52 (59%), Positives = 41/52 (78%) Frame = +3 Query: 66 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 M ++ G VKWFN KGFGFI+P+DGS D+FVH SAI+++ +R+LNEN VE Sbjct: 1 MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVE 52
>CSPJ_SALTI (P58726) Cold shock-like protein cspJ| Length = 70 Score = 69.7 bits (169), Expect = 2e-12 Identities = 31/52 (59%), Positives = 41/52 (78%) Frame = +3 Query: 66 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 M ++ G VKWFN KGFGFI+P+DGS D+FVH SAI+++ +R+LNEN VE Sbjct: 1 MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVE 52
>CSPE_SHIFL (P0A975) Cold shock-like protein cspE (CSP-E)| Length = 68 Score = 69.7 bits (169), Expect = 2e-12 Identities = 30/49 (61%), Positives = 40/49 (81%) Frame = +3 Query: 75 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 ++KG VKWFN +KGFGFI+PEDGS D+FVH SAI+ +G+++L E VE Sbjct: 2 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVE 50
>CSPE_ECOLI (P0A972) Cold shock-like protein cspE (CSP-E)| Length = 68 Score = 69.7 bits (169), Expect = 2e-12 Identities = 30/49 (61%), Positives = 40/49 (81%) Frame = +3 Query: 75 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 ++KG VKWFN +KGFGFI+PEDGS D+FVH SAI+ +G+++L E VE Sbjct: 2 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVE 50
>CSPE_ECOL6 (P0A973) Cold shock-like protein cspE (CSP-E)| Length = 68 Score = 69.7 bits (169), Expect = 2e-12 Identities = 30/49 (61%), Positives = 40/49 (81%) Frame = +3 Query: 75 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 ++KG VKWFN +KGFGFI+PEDGS D+FVH SAI+ +G+++L E VE Sbjct: 2 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVE 50
>CSPE_ECO57 (P0A974) Cold shock-like protein cspE (CSP-E)| Length = 68 Score = 69.7 bits (169), Expect = 2e-12 Identities = 30/49 (61%), Positives = 40/49 (81%) Frame = +3 Query: 75 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 ++KG VKWFN +KGFGFI+PEDGS D+FVH SAI+ +G+++L E VE Sbjct: 2 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVE 50
>CSPA_MYCTU (P63848) Probable cold shock protein A| Length = 67 Score = 69.3 bits (168), Expect = 3e-12 Identities = 30/47 (63%), Positives = 37/47 (78%) Frame = +3 Query: 81 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 +GTVKWFN KGFGFI+PEDGS D+FVH + I+ G+R+L EN VE Sbjct: 3 QGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGTGFRTLEENQKVE 49
>CSPA_MYCBO (P63849) Probable cold shock protein A| Length = 67 Score = 69.3 bits (168), Expect = 3e-12 Identities = 30/47 (63%), Positives = 37/47 (78%) Frame = +3 Query: 81 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 +GTVKWFN KGFGFI+PEDGS D+FVH + I+ G+R+L EN VE Sbjct: 3 QGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGTGFRTLEENQKVE 49
>CSPA_MICLU (O30875) Major cold shock protein| Length = 67 Score = 68.9 bits (167), Expect = 3e-12 Identities = 30/46 (65%), Positives = 37/46 (80%) Frame = +3 Query: 84 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 GTVKWFN KG+GFI+PED S D+FVH SAI+ +G++ L END VE Sbjct: 4 GTVKWFNAEKGYGFIAPEDNSADVFVHFSAIQGNGFKELQENDRVE 49
>CSPA_SHIFL (P0A9Y4) Cold shock protein cspA (CSP-A) (7.4 kDa cold shock| protein) (CS7.4) Length = 69 Score = 68.6 bits (166), Expect = 4e-12 Identities = 30/48 (62%), Positives = 38/48 (79%) Frame = +3 Query: 75 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 ++ G VKWFN KGFGFI+P+DGS D+FVH SAI+ DGY+SL+E V Sbjct: 3 KMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKV 50
>CSPA_SALTY (P0A9Y2) Cold shock protein cspA (CSP-A) (7.4 kDa cold shock| protein) (CS7.4) Length = 69 Score = 68.6 bits (166), Expect = 4e-12 Identities = 30/48 (62%), Positives = 38/48 (79%) Frame = +3 Query: 75 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 ++ G VKWFN KGFGFI+P+DGS D+FVH SAI+ DGY+SL+E V Sbjct: 3 KMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKV 50
>CSPA_SALTI (P0A9Y3) Cold shock protein cspA (CSP-A) (7.4 kDa cold shock| protein) (CS7.4) Length = 69 Score = 68.6 bits (166), Expect = 4e-12 Identities = 30/48 (62%), Positives = 38/48 (79%) Frame = +3 Query: 75 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 ++ G VKWFN KGFGFI+P+DGS D+FVH SAI+ DGY+SL+E V Sbjct: 3 KMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKV 50
>CSPA_SALEN (P0A9Y5) Cold shock protein cspA (CSP-A) (7.4 kDa cold shock| protein) (CS7.4) Length = 69 Score = 68.6 bits (166), Expect = 4e-12 Identities = 30/48 (62%), Positives = 38/48 (79%) Frame = +3 Query: 75 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 ++ G VKWFN KGFGFI+P+DGS D+FVH SAI+ DGY+SL+E V Sbjct: 3 KMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKV 50
>CSPA_ECOLI (P0A9X9) Cold shock protein cspA (CSP-A) (7.4 kDa cold shock| protein) (CS7.4) Length = 69 Score = 68.6 bits (166), Expect = 4e-12 Identities = 30/48 (62%), Positives = 38/48 (79%) Frame = +3 Query: 75 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 ++ G VKWFN KGFGFI+P+DGS D+FVH SAI+ DGY+SL+E V Sbjct: 3 KMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKV 50
>CSPA_ECOL6 (P0A9Y0) Cold shock protein cspA (CSP-A) (7.4 kDa cold shock| protein) (CS7.4) Length = 69 Score = 68.6 bits (166), Expect = 4e-12 Identities = 30/48 (62%), Positives = 38/48 (79%) Frame = +3 Query: 75 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 ++ G VKWFN KGFGFI+P+DGS D+FVH SAI+ DGY+SL+E V Sbjct: 3 KMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKV 50
>CSPA_ECO57 (P0A9Y1) Cold shock protein cspA (CSP-A) (7.4 kDa cold shock| protein) (CS7.4) Length = 69 Score = 68.6 bits (166), Expect = 4e-12 Identities = 30/48 (62%), Positives = 38/48 (79%) Frame = +3 Query: 75 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 ++ G VKWFN KGFGFI+P+DGS D+FVH SAI+ DGY+SL+E V Sbjct: 3 KMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKV 50
>CSPI_ECOLI (P0A986) Cold shock-like protein cspI (CPS-I)| Length = 70 Score = 67.0 bits (162), Expect = 1e-11 Identities = 29/52 (55%), Positives = 40/52 (76%) Frame = +3 Query: 66 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 M ++ G VKWFN KGFGFI+P+DGS D+FVH SAI+++ +++L EN VE Sbjct: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVE 52
>CSPI_ECOL6 (P0A987) Cold shock-like protein cspI (CPS-I)| Length = 70 Score = 67.0 bits (162), Expect = 1e-11 Identities = 29/52 (55%), Positives = 40/52 (76%) Frame = +3 Query: 66 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 M ++ G VKWFN KGFGFI+P+DGS D+FVH SAI+++ +++L EN VE Sbjct: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVE 52
>CSPC_SALTY (P0A9Y9) Cold shock-like protein cspC (CSP-C)| Length = 68 Score = 67.0 bits (162), Expect = 1e-11 Identities = 29/49 (59%), Positives = 39/49 (79%) Frame = +3 Query: 75 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 ++KG VKWFN +KGFGFI+P DGS D+FVH SAI+ +G+++L E VE Sbjct: 2 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVE 50
>CSPC_SALTI (P0A9Z0) Cold shock-like protein cspC (CSP-C)| Length = 68 Score = 67.0 bits (162), Expect = 1e-11 Identities = 29/49 (59%), Positives = 39/49 (79%) Frame = +3 Query: 75 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 ++KG VKWFN +KGFGFI+P DGS D+FVH SAI+ +G+++L E VE Sbjct: 2 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVE 50
>CSPC_ECOLI (P0A9Y6) Cold shock-like protein cspC (CSP-C)| Length = 68 Score = 67.0 bits (162), Expect = 1e-11 Identities = 29/49 (59%), Positives = 39/49 (79%) Frame = +3 Query: 75 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 ++KG VKWFN +KGFGFI+P DGS D+FVH SAI+ +G+++L E VE Sbjct: 2 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVE 50
>CSPC_ECOL6 (P0A9Y7) Cold shock-like protein cspC (CSP-C)| Length = 68 Score = 67.0 bits (162), Expect = 1e-11 Identities = 29/49 (59%), Positives = 39/49 (79%) Frame = +3 Query: 75 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 ++KG VKWFN +KGFGFI+P DGS D+FVH SAI+ +G+++L E VE Sbjct: 2 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVE 50
>CSPC_ECO57 (P0A9Y8) Cold shock-like protein cspC (CSP-C)| Length = 68 Score = 67.0 bits (162), Expect = 1e-11 Identities = 29/49 (59%), Positives = 39/49 (79%) Frame = +3 Query: 75 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 ++KG VKWFN +KGFGFI+P DGS D+FVH SAI+ +G+++L E VE Sbjct: 2 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVE 50
>CSPC_BUCAI (P57407) Cold shock-like protein cspC (CSP-C)| Length = 68 Score = 67.0 bits (162), Expect = 1e-11 Identities = 28/49 (57%), Positives = 39/49 (79%) Frame = +3 Query: 75 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 ++KG VKWFN +KGFGFI+P DGS D+FVH S+I+ +G+++L E VE Sbjct: 2 KIKGQVKWFNESKGFGFITPSDGSKDVFVHFSSIQGNGFKTLTEGQNVE 50
>CSP7_STRCL (Q01761) Cold shock-like protein 7.0| Length = 66 Score = 66.6 bits (161), Expect = 2e-11 Identities = 30/45 (66%), Positives = 34/45 (75%) Frame = +3 Query: 84 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 GTVKWFN KGFGFI+ + G D+FVH SAI A G+RSL EN VV Sbjct: 4 GTVKWFNAEKGFGFIAQDGGGPDVFVHYSAINATGFRSLEENQVV 48
>CSPB_ECOLI (P36995) Cold shock-like protein cspB (CSP-B)| Length = 71 Score = 66.2 bits (160), Expect = 2e-11 Identities = 31/51 (60%), Positives = 36/51 (70%) Frame = +3 Query: 66 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 M ++ G VKWFN KGFGFISP DGS D+FVH SAI+ D YR+L E V Sbjct: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKV 51
>CSPC_SHIFL (Q83RI9) Cold shock-like protein cspC (CSP-C)| Length = 68 Score = 65.5 bits (158), Expect = 4e-11 Identities = 29/49 (59%), Positives = 38/49 (77%) Frame = +3 Query: 75 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 ++KG VKWFN +KGFGFI+P DGS D+FVH SAI+ +G ++L E VE Sbjct: 2 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGLKTLAEGQNVE 50
>CSPD_SHIFL (P0A971) Cold shock-like protein cspD (CSP-D)| Length = 74 Score = 65.1 bits (157), Expect = 5e-11 Identities = 28/47 (59%), Positives = 33/47 (70%) Frame = +3 Query: 81 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 KGTVKWFN KGFGFI PE G +D+F H S I+ DGYR+L V+ Sbjct: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQ 49
>CSPD_ECOLI (P0A968) Cold shock-like protein cspD (CSP-D)| Length = 74 Score = 65.1 bits (157), Expect = 5e-11 Identities = 28/47 (59%), Positives = 33/47 (70%) Frame = +3 Query: 81 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 KGTVKWFN KGFGFI PE G +D+F H S I+ DGYR+L V+ Sbjct: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQ 49
>CSPD_ECOL6 (P0A969) Cold shock-like protein cspD (CSP-D)| Length = 74 Score = 65.1 bits (157), Expect = 5e-11 Identities = 28/47 (59%), Positives = 33/47 (70%) Frame = +3 Query: 81 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 KGTVKWFN KGFGFI PE G +D+F H S I+ DGYR+L V+ Sbjct: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQ 49
>CSPD_ECO57 (P0A970) Cold shock-like protein cspD (CSP-D)| Length = 74 Score = 65.1 bits (157), Expect = 5e-11 Identities = 28/47 (59%), Positives = 33/47 (70%) Frame = +3 Query: 81 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 KGTVKWFN KGFGFI PE G +D+F H S I+ DGYR+L V+ Sbjct: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQ 49
>CSPB_YERPE (P0A362) Cold shock-like protein cspB| Length = 70 Score = 64.7 bits (156), Expect = 6e-11 Identities = 29/52 (55%), Positives = 38/52 (73%) Frame = +3 Query: 66 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 M ++ G VKWF+ KGFGFISP DGS D+FVH SAI+ + Y++L+E VE Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGNDYKTLDEGQNVE 52
>CSPB_YEREN (P0A363) Cold shock-like protein cspB| Length = 70 Score = 64.7 bits (156), Expect = 6e-11 Identities = 29/52 (55%), Positives = 38/52 (73%) Frame = +3 Query: 66 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 M ++ G VKWF+ KGFGFISP DGS D+FVH SAI+ + Y++L+E VE Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGNDYKTLDEGQNVE 52
>CAPB_PSESM (P0A105) Cold shock protein capB (Cold acclimation protein B)| Length = 69 Score = 64.7 bits (156), Expect = 6e-11 Identities = 31/51 (60%), Positives = 37/51 (72%) Frame = +3 Query: 66 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 M R GTVKWFN KGFGFI+P+ G DDLFVH AI++DG++SL E V Sbjct: 1 MSNRQTGTVKWFNDEKGFGFITPQSG-DDLFVHFKAIQSDGFKSLKEGQQV 50
>CAPB_PSEFR (P0A106) Cold shock protein capB (Cold acclimation protein B)| (C8.0) Length = 69 Score = 64.7 bits (156), Expect = 6e-11 Identities = 31/51 (60%), Positives = 37/51 (72%) Frame = +3 Query: 66 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 M R GTVKWFN KGFGFI+P+ G DDLFVH AI++DG++SL E V Sbjct: 1 MSNRQTGTVKWFNDEKGFGFITPQSG-DDLFVHFKAIQSDGFKSLKEGQQV 50
>CSPA_RHIME (Q9Z3S6) Cold shock protein cspA| Length = 69 Score = 64.3 bits (155), Expect = 8e-11 Identities = 29/45 (64%), Positives = 34/45 (75%) Frame = +3 Query: 84 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 GTVKWFN TKGFGFI P+DG+ D+FVH SA++ G RSL E V Sbjct: 4 GTVKWFNSTKGFGFIQPDDGATDVFVHASAVERAGMRSLVEGQKV 48
>CSPC_BACCR (P62171) Cold shock-like protein cspC| Length = 65 Score = 64.3 bits (155), Expect = 8e-11 Identities = 31/48 (64%), Positives = 36/48 (75%) Frame = +3 Query: 78 VKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 ++G VKWFN KGFGFI EDG DD+FVH SAI+ DGY+SL E VE Sbjct: 1 MQGRVKWFNAEKGFGFIEREDG-DDVFVHFSAIQQDGYKSLEEGQQVE 47
>CSPC_BACCE (P62170) Cold shock-like protein cspC| Length = 65 Score = 64.3 bits (155), Expect = 8e-11 Identities = 31/48 (64%), Positives = 36/48 (75%) Frame = +3 Query: 78 VKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 ++G VKWFN KGFGFI EDG DD+FVH SAI+ DGY+SL E VE Sbjct: 1 MQGRVKWFNAEKGFGFIEREDG-DDVFVHFSAIQQDGYKSLEEGQQVE 47
>CSPC_BACAN (P62169) Cold shock-like protein cspC| Length = 65 Score = 64.3 bits (155), Expect = 8e-11 Identities = 31/48 (64%), Positives = 36/48 (75%) Frame = +3 Query: 78 VKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 ++G VKWFN KGFGFI EDG DD+FVH SAI+ DGY+SL E VE Sbjct: 1 MQGRVKWFNAEKGFGFIEREDG-DDVFVHFSAIQQDGYKSLEEGQQVE 47
>Y4CH_RHISN (P55390) Probable cold shock protein y4cH| Length = 69 Score = 63.2 bits (152), Expect = 2e-10 Identities = 27/45 (60%), Positives = 33/45 (73%) Frame = +3 Query: 84 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 GTVKWFN TKGFGFI P+DGS D+FVH SA++ G R L + + Sbjct: 5 GTVKWFNATKGFGFIQPDDGSADVFVHISAVERAGLRELKDGQKI 49
>CSP_ARTGO (P54584) Cold shock protein| Length = 67 Score = 62.8 bits (151), Expect = 2e-10 Identities = 26/47 (55%), Positives = 36/47 (76%) Frame = +3 Query: 81 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 +GTVKWFN KGFGFI+P+D D+FVH S I+ G+++L+EN V+ Sbjct: 3 QGTVKWFNAEKGFGFITPDDSDGDVFVHYSEIQTGGFKTLDENARVQ 49
>CSPA_STIAU (P72366) Cold shock-like protein cspA| Length = 68 Score = 62.4 bits (150), Expect = 3e-10 Identities = 27/46 (58%), Positives = 33/46 (71%) Frame = +3 Query: 84 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 GTVKWFN KGFGFI+ + G +D+F H SAI DG+R+L E VE Sbjct: 4 GTVKWFNDAKGFGFITQDGGGEDVFCHHSAINMDGFRTLQEGQKVE 49
>CSPA_LISMO (P0A355) Cold shock-like protein cspLA (CspL)| Length = 66 Score = 62.4 bits (150), Expect = 3e-10 Identities = 29/46 (63%), Positives = 36/46 (78%) Frame = +3 Query: 81 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 +GTVKWFN KGFGFI E+G DD+FVH SAI+ DG++SL+E V Sbjct: 3 QGTVKWFNAEKGFGFIERENG-DDVFVHFSAIQGDGFKSLDEGQAV 47
>CSPA_LISIN (P0A356) Cold shock-like protein cspLA (CspL)| Length = 66 Score = 62.4 bits (150), Expect = 3e-10 Identities = 29/46 (63%), Positives = 36/46 (78%) Frame = +3 Query: 81 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 +GTVKWFN KGFGFI E+G DD+FVH SAI+ DG++SL+E V Sbjct: 3 QGTVKWFNAEKGFGFIERENG-DDVFVHFSAIQGDGFKSLDEGQAV 47
>CSPC_BACSU (P39158) Cold shock protein cspC| Length = 66 Score = 62.0 bits (149), Expect = 4e-10 Identities = 29/46 (63%), Positives = 37/46 (80%) Frame = +3 Query: 81 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 +GTVKWFN KGFGFI E+G DD+FVH SAI++DG++SL+E V Sbjct: 3 QGTVKWFNAEKGFGFIERENG-DDVFVHFSAIQSDGFKSLDEGQKV 47
>TAPB_PSEFR (P72192) Temperature acclimation protein B (E8.0) (Fragment)| Length = 63 Score = 61.6 bits (148), Expect = 5e-10 Identities = 30/51 (58%), Positives = 36/51 (70%) Frame = +3 Query: 66 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 M +R GTVKWFN KGFGFI+PE G DLFVH AI+ +G++SL E V Sbjct: 1 MSQRQSGTVKWFNDEKGFGFITPESG-PDLFVHFRAIQGNGFKSLKEGQKV 50
>CSPA_BORPE (P0A352) Cold shock-like protein cspA| Length = 67 Score = 61.6 bits (148), Expect = 5e-10 Identities = 27/45 (60%), Positives = 33/45 (73%) Frame = +3 Query: 84 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 G VKWFN KG+GFI+PE G DLF H S I+A+G++SL EN V Sbjct: 4 GVVKWFNAEKGYGFITPEAGGKDLFAHFSEIQANGFKSLEENQRV 48
>CSPA_BORPA (P0A354) Cold shock-like protein cspA| Length = 67 Score = 61.6 bits (148), Expect = 5e-10 Identities = 27/45 (60%), Positives = 33/45 (73%) Frame = +3 Query: 84 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 G VKWFN KG+GFI+PE G DLF H S I+A+G++SL EN V Sbjct: 4 GVVKWFNAEKGYGFITPEAGGKDLFAHFSEIQANGFKSLEENQRV 48
>CSPA_BORBR (P0A353) Cold shock-like protein cspA| Length = 67 Score = 61.6 bits (148), Expect = 5e-10 Identities = 27/45 (60%), Positives = 33/45 (73%) Frame = +3 Query: 84 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 G VKWFN KG+GFI+PE G DLF H S I+A+G++SL EN V Sbjct: 4 GVVKWFNAEKGYGFITPEAGGKDLFAHFSEIQANGFKSLEENQRV 48
>CSP2_LACPL (P96349) Cold shock protein 2| Length = 66 Score = 60.5 bits (145), Expect = 1e-09 Identities = 28/45 (62%), Positives = 36/45 (80%) Frame = +3 Query: 84 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 GTVKWFN KGFGFI+ EDG+ D+FVH SAI+ DG+++L+E V Sbjct: 4 GTVKWFNADKGFGFITGEDGT-DVFVHFSAIQTDGFKTLDEGQKV 47
>CSPA_PSEAE (P95459) Major cold shock protein cspA| Length = 69 Score = 60.1 bits (144), Expect = 2e-09 Identities = 29/51 (56%), Positives = 35/51 (68%) Frame = +3 Query: 66 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 M R GTVKWFN KGFGFI+PE G +DLFVH +I+ G++SL E V Sbjct: 1 MSNRQNGTVKWFNDAKGFGFITPESG-NDLFVHFRSIQGTGFKSLQEGQKV 50
>CSPA_VIBCH (Q9KN00) Cold shock-like protein cspA| Length = 70 Score = 60.1 bits (144), Expect = 2e-09 Identities = 25/51 (49%), Positives = 38/51 (74%) Frame = +3 Query: 66 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 M +++ G+VKWFN TKGFGFIS ++G D+FVH +I ++G+++L E V Sbjct: 1 MSQKMTGSVKWFNETKGFGFISQDNGGQDVFVHFKSIVSEGFKTLAEGQRV 51
>CSPB_LISMO (P0A357) Cold shock-like protein cspLB (CspB)| Length = 66 Score = 59.3 bits (142), Expect = 3e-09 Identities = 28/46 (60%), Positives = 35/46 (76%) Frame = +3 Query: 84 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 GTVKWFN KGFGFI E G DD+FVH SAI+ +G+++L+E VE Sbjct: 4 GTVKWFNSEKGFGFIEVE-GGDDVFVHFSAIEGEGFKTLDEGQSVE 48
>CSPB_LISIN (P0A358) Cold shock-like protein cspLB (CspB)| Length = 66 Score = 59.3 bits (142), Expect = 3e-09 Identities = 28/46 (60%), Positives = 35/46 (76%) Frame = +3 Query: 84 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 GTVKWFN KGFGFI E G DD+FVH SAI+ +G+++L+E VE Sbjct: 4 GTVKWFNSEKGFGFIEVE-GGDDVFVHFSAIEGEGFKTLDEGQSVE 48
>CSPV_VIBCH (Q9KL16) Cold shock protein cspV| Length = 70 Score = 58.9 bits (141), Expect = 3e-09 Identities = 23/51 (45%), Positives = 40/51 (78%) Frame = +3 Query: 66 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 M ++ G+VKWFN TKGFGF++ ++G +D+FVH ++I+++G+++L E V Sbjct: 1 MSTKMTGSVKWFNETKGFGFLTQDNGGNDVFVHFNSIQSEGFKTLAEGQRV 51
>CSP1_LACPL (P71478) Cold shock protein 1| Length = 66 Score = 58.9 bits (141), Expect = 3e-09 Identities = 27/45 (60%), Positives = 35/45 (77%) Frame = +3 Query: 84 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 GTVKWFN KG+GFI+ EDG +D+FVH SAI+ DG+++L E V Sbjct: 4 GTVKWFNADKGYGFITGEDG-NDVFVHFSAIQTDGFKTLEEGQKV 47
>CSPF_STRCO (P48859) Cold shock protein scoF| Length = 67 Score = 58.5 bits (140), Expect = 4e-09 Identities = 26/45 (57%), Positives = 29/45 (64%) Frame = +3 Query: 84 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 GTVKWFN KGFGFI+ + G D+F H S I A GYR L E V Sbjct: 4 GTVKWFNSEKGFGFIAQDGGGPDVFAHYSNINAQGYRELQEGQAV 48
>CSPD_VIBCH (Q9KSW4) Cold shock-like protein cspD| Length = 76 Score = 58.2 bits (139), Expect = 6e-09 Identities = 26/45 (57%), Positives = 29/45 (64%) Frame = +3 Query: 84 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 GTVKWFN KGFGFI PE D+F H S I+ DGYR+L V Sbjct: 7 GTVKWFNNAKGFGFICPEGEDGDIFAHYSTIQMDGYRTLKAGQQV 51
>CSPB_BACCE (Q45097) Cold shock-like protein cspB| Length = 65 Score = 58.2 bits (139), Expect = 6e-09 Identities = 28/47 (59%), Positives = 35/47 (74%) Frame = +3 Query: 78 VKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 + G VKWFN KGFGFI E GS+D+FVH SAI++DGY++L E V Sbjct: 1 MNGKVKWFNNEKGFGFIEME-GSEDVFVHFSAIQSDGYKALEEGQEV 46
>YBX2B_XENLA (P45441) Y-box-binding protein 2-B (Cytoplasmic RNA-binding protein| p54) (mRNP3) Length = 324 Score = 58.2 bits (139), Expect = 6e-09 Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 4/62 (6%) Frame = +3 Query: 48 RFRRRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDV 215 + ++ + +V+GTVKWFNV G+GFI+ D +D+FVHQ+AIK + RS+ + + Sbjct: 32 QINKKLLATQVQGTVKWFNVRNGYGFINRNDSKEDVFVHQTAIKKNNPRKFLRSVGDGET 91 Query: 216 VE 221 VE Sbjct: 92 VE 93
>CSPG_SHEVI (Q9S170) Cold shock-like protein cspG| Length = 70 Score = 57.8 bits (138), Expect = 8e-09 Identities = 25/51 (49%), Positives = 34/51 (66%) Frame = +3 Query: 66 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 M G VKWFN KGFGFI+ ++G DD+FVH +I +DG+++L E V Sbjct: 1 MSNSTTGLVKWFNEEKGFGFITQDNGGDDVFVHFRSITSDGFKTLAEGQKV 51
>CSPD_BACSU (P51777) Cold shock protein cspD| Length = 66 Score = 57.4 bits (137), Expect = 1e-08 Identities = 28/45 (62%), Positives = 32/45 (71%) Frame = +3 Query: 84 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 G VKWFN KGFGFI E G DD+FVH +AI+ DGY+SL E V Sbjct: 4 GKVKWFNNEKGFGFIEVE-GGDDVFVHFTAIEGDGYKSLEEGQEV 47
>YBX2A_XENLA (P21574) Y-box-binding protein 2-A (Cytoplasmic RNA-binding protein| p56) (mRNP4) Length = 336 Score = 57.0 bits (136), Expect = 1e-08 Identities = 26/59 (44%), Positives = 40/59 (67%), Gaps = 4/59 (6%) Frame = +3 Query: 57 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDVVE 221 ++ + +V+GTVKWFNV G+GFI+ D +D+FVHQ+AIK + RS+ + + VE Sbjct: 35 KKVLATQVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGETVE 93
>CSPA_SHEVI (Q9S1B7) Cold shock-like protein cspA| Length = 70 Score = 56.6 bits (135), Expect = 2e-08 Identities = 24/51 (47%), Positives = 36/51 (70%) Frame = +3 Query: 66 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 M + GTVKWFN KGFGF++ ++G D+FVH AI ++G+++L+E V Sbjct: 1 MSDSNTGTVKWFNEDKGFGFLTQDNGGADVFVHFRAIASEGFKTLDEGQKV 51
>CSPA_RICPR (Q9ZCP9) Cold shock-like protein cspA| Length = 70 Score = 56.6 bits (135), Expect = 2e-08 Identities = 26/51 (50%), Positives = 32/51 (62%) Frame = +3 Query: 66 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 M + G VKW+N TK FGFI ++G D+FVH+SAI A G SL E V Sbjct: 1 MATNIVGKVKWYNSTKNFGFIEQDNGGKDVFVHKSAIDAAGLHSLEEGQEV 51
>DBPA_HUMAN (P16989) DNA-binding protein A (Cold shock domain-containing| protein A) (Single-strand DNA-binding protein NF-GMB) Length = 372 Score = 56.2 bits (134), Expect = 2e-08 Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 4/59 (6%) Frame = +3 Query: 57 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDVVE 221 ++ + +V GTVKWFNV G+GFI+ D +D+FVHQ+AIK + RS+ + + VE Sbjct: 84 KKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVE 142
>DBPA_XENLA (Q5PQD5) DNA-binding protein A (Cold shock domain-containing| protein A) Length = 361 Score = 56.2 bits (134), Expect = 2e-08 Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 4/59 (6%) Frame = +3 Query: 57 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDVVE 221 ++ + +V GTVKWFNV G+GFI+ D +D+FVHQ+AIK + RS+ + + VE Sbjct: 76 KKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVE 134
>DBPA_RAT (Q62764) DNA-binding protein A (Cold shock domain-containing| protein A) (Muscle Y-box protein YB2) (Y-box-binding protein-A) (RYB-A) Length = 361 Score = 56.2 bits (134), Expect = 2e-08 Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 4/59 (6%) Frame = +3 Query: 57 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDVVE 221 ++ + +V GTVKWFNV G+GFI+ D +D+FVHQ+AIK + RS+ + + VE Sbjct: 76 KKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVE 134
>DBPA_MOUSE (Q9JKB3) DNA-binding protein A (Cold shock domain-containing| protein A) (Y-box protein 3) Length = 361 Score = 56.2 bits (134), Expect = 2e-08 Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 4/59 (6%) Frame = +3 Query: 57 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDVVE 221 ++ + +V GTVKWFNV G+GFI+ D +D+FVHQ+AIK + RS+ + + VE Sbjct: 76 KKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVE 134
>CSPE_BACCE (Q45100) Cold shock-like protein cspE (Fragment)| Length = 54 Score = 56.2 bits (134), Expect = 2e-08 Identities = 28/45 (62%), Positives = 32/45 (71%) Frame = +3 Query: 84 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 G VKWFN KGFGFI DGS D+FVH SAI DG++SL+E V Sbjct: 5 GKVKWFNSEKGFGFIEVADGS-DVFVHFSAITGDGFKSLDEGQEV 48
>CSPD_BACCR (Q816H3) Cold shock-like protein cspD| Length = 66 Score = 56.2 bits (134), Expect = 2e-08 Identities = 27/45 (60%), Positives = 32/45 (71%) Frame = +3 Query: 84 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 G VKWFN KGFGFI E G DD+FVH SAI+ DG+++L E V Sbjct: 4 GKVKWFNSEKGFGFIEVE-GGDDVFVHFSAIQGDGFKTLEEGQEV 47
>CSPD_BACAN (Q81K90) Cold shock-like protein cspD| Length = 66 Score = 56.2 bits (134), Expect = 2e-08 Identities = 27/45 (60%), Positives = 32/45 (71%) Frame = +3 Query: 84 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 G VKWFN KGFGFI E G DD+FVH SAI+ DG+++L E V Sbjct: 4 GKVKWFNSEKGFGFIEVE-GGDDVFVHFSAIQGDGFKTLEEGQEV 47
>CSPB_BACSU (P32081) Cold shock protein cspB (Major cold shock protein)| Length = 67 Score = 56.2 bits (134), Expect = 2e-08 Identities = 26/47 (55%), Positives = 34/47 (72%) Frame = +3 Query: 78 VKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 ++G VKWFN KGFGFI E G DD+FVH SAI+ +G+++L E V Sbjct: 2 LEGKVKWFNSEKGFGFIEVE-GQDDVFVHFSAIQGEGFKTLEEGQAV 47
>CSPA_STRP8 (P0A361) Major cold shock protein| Length = 67 Score = 56.2 bits (134), Expect = 2e-08 Identities = 26/46 (56%), Positives = 34/46 (73%) Frame = +3 Query: 81 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 +GTVKWFN KGFGFIS E+G D+F H SAI+ +G+++L E V Sbjct: 3 QGTVKWFNAEKGFGFISTENG-QDVFAHFSAIQTNGFKTLEEGQKV 47
>CSPA_STRP3 (P0A360) Major cold shock protein| Length = 67 Score = 56.2 bits (134), Expect = 2e-08 Identities = 26/46 (56%), Positives = 34/46 (73%) Frame = +3 Query: 81 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 +GTVKWFN KGFGFIS E+G D+F H SAI+ +G+++L E V Sbjct: 3 QGTVKWFNAEKGFGFISTENG-QDVFAHFSAIQTNGFKTLEEGQKV 47
>CSPA_STRP1 (P0C0F1) Major cold shock protein| Length = 67 Score = 56.2 bits (134), Expect = 2e-08 Identities = 26/46 (56%), Positives = 34/46 (73%) Frame = +3 Query: 81 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 +GTVKWFN KGFGFIS E+G D+F H SAI+ +G+++L E V Sbjct: 3 QGTVKWFNAEKGFGFISTENG-QDVFAHFSAIQTNGFKTLEEGQKV 47
>YBOX1_RAT (P62961) Nuclease sensitive element-binding protein 1| (Y-box-binding protein 1) (Y-box transcription factor) (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (Enhancer factor I subunit A) (EFI-A) (DNA-binding protein B) (DBPB) Length = 321 Score = 55.8 bits (133), Expect = 3e-08 Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 4/59 (6%) Frame = +3 Query: 57 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDVVE 221 ++ + +V GTVKWFNV G+GFI+ D +D+FVHQ+AIK + RS+ + + VE Sbjct: 49 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVE 107
>YBOX1_MOUSE (P62960) Nuclease sensitive element-binding protein 1| (Y-box-binding protein 1) (Y-box transcription factor) (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (Enhancer factor I subunit A) (EFI-A) (DNA-binding protein B) (DBPB) Length = 321 Score = 55.8 bits (133), Expect = 3e-08 Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 4/59 (6%) Frame = +3 Query: 57 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDVVE 221 ++ + +V GTVKWFNV G+GFI+ D +D+FVHQ+AIK + RS+ + + VE Sbjct: 49 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVE 107
>YBOX1_CHICK (Q06066) Nuclease sensitive element-binding protein 1 (Y-box| binding protein 1) (Y-box transcription factor) Length = 321 Score = 55.8 bits (133), Expect = 3e-08 Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 4/59 (6%) Frame = +3 Query: 57 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDVVE 221 ++ + +V GTVKWFNV G+GFI+ D +D+FVHQ+AIK + RS+ + + VE Sbjct: 49 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVE 107
>CSPA_RICCN (Q92GV1) Cold shock-like protein cspA| Length = 70 Score = 55.8 bits (133), Expect = 3e-08 Identities = 25/51 (49%), Positives = 32/51 (62%) Frame = +3 Query: 66 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 M + G VKW+N TK FGFI ++G D+FVH+SA+ A G SL E V Sbjct: 1 MATNIVGKVKWYNSTKNFGFIEQDNGGKDVFVHKSAVDAAGLHSLEEGQDV 51
>YBOX1_XENLA (P21573) Nuclease sensitive element-binding protein 1 (Y-box| binding protein 1) (Y-box transcription factor) Length = 303 Score = 55.8 bits (133), Expect = 3e-08 Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 4/59 (6%) Frame = +3 Query: 57 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDVVE 221 ++ + +V GTVKWFNV G+GFI+ D +D+FVHQ+AIK + RS+ + + VE Sbjct: 30 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVE 88
>CSPD_HAEIN (P46449) Cold shock-like protein cspD| Length = 72 Score = 55.8 bits (133), Expect = 3e-08 Identities = 26/46 (56%), Positives = 29/46 (63%) Frame = +3 Query: 84 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 G VKWFN KGFGFIS E D+F H S I+ DGYRSL V+ Sbjct: 4 GIVKWFNNAKGFGFISAEGVDADIFAHYSVIEMDGYRSLKAGQKVQ 49
>YB3_XENLA (Q00436) B box-binding protein (Protein YB3)| Length = 305 Score = 55.8 bits (133), Expect = 3e-08 Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 4/59 (6%) Frame = +3 Query: 57 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDVVE 221 ++ + +V GTVKWFNV G+GFI+ D +D+FVHQ+AIK + RS+ + + VE Sbjct: 30 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVE 88
>YBOX1_RABIT (Q28618) Nuclease sensitive element-binding protein 1| (Y-box-binding protein 1) (Y-box transcription factor) (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (Enhancer factor I subunit A) (EFI-A) (p50) Length = 323 Score = 55.8 bits (133), Expect = 3e-08 Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 4/59 (6%) Frame = +3 Query: 57 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDVVE 221 ++ + +V GTVKWFNV G+GFI+ D +D+FVHQ+AIK + RS+ + + VE Sbjct: 51 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVE 109
>YBOX1_HUMAN (P67809) Nuclease sensitive element-binding protein 1| (Y-box-binding protein 1) (Y-box transcription factor) (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (Enhancer factor I subunit A) (EFI-A) (DNA-binding protein B) (DBPB) Length = 323 Score = 55.8 bits (133), Expect = 3e-08 Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 4/59 (6%) Frame = +3 Query: 57 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDVVE 221 ++ + +V GTVKWFNV G+GFI+ D +D+FVHQ+AIK + RS+ + + VE Sbjct: 51 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVE 109
>YBOX1_BOVIN (P67808) Nuclease sensitive element-binding protein 1| (Y-box-binding protein 1) (Y-box transcription factor) (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (Enhancer factor I subunit A) (EFI-A) (DNA-binding protein B) (DBPB) Length = 323 Score = 55.8 bits (133), Expect = 3e-08 Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 4/59 (6%) Frame = +3 Query: 57 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDVVE 221 ++ + +V GTVKWFNV G+GFI+ D +D+FVHQ+AIK + RS+ + + VE Sbjct: 51 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVE 109
>CSPA_STRP6 (Q5X9L4) Major cold shock protein| Length = 67 Score = 55.8 bits (133), Expect = 3e-08 Identities = 26/46 (56%), Positives = 33/46 (71%) Frame = +3 Query: 81 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 +GTVKWFN KGFGFIS E+G D+F H SAI+ G+++L E V Sbjct: 3 QGTVKWFNAEKGFGFISTENG-QDVFAHFSAIQTSGFKTLEEGQKV 47
>CSPE_BACCR (Q81DK5) Cold shock-like protein cspE| Length = 67 Score = 55.1 bits (131), Expect = 5e-08 Identities = 27/45 (60%), Positives = 32/45 (71%) Frame = +3 Query: 84 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 G VKWFN KGFGFI DG +D+FVH SAI DG++SL+E V Sbjct: 5 GKVKWFNSEKGFGFIEVADG-NDVFVHFSAITGDGFKSLDEGQEV 48
>CSPE_BACAN (Q81QK2) Cold shock-like protein cspE| Length = 67 Score = 55.1 bits (131), Expect = 5e-08 Identities = 27/45 (60%), Positives = 32/45 (71%) Frame = +3 Query: 84 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 G VKWFN KGFGFI E G +D+FVH SAI DG++SL+E V Sbjct: 5 GKVKWFNSEKGFGFIEVE-GGNDVFVHFSAITGDGFKSLDEGQEV 48
>CSP_THEMA (O54310) Cold shock-like protein| Length = 66 Score = 55.1 bits (131), Expect = 5e-08 Identities = 24/48 (50%), Positives = 37/48 (77%) Frame = +3 Query: 78 VKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 ++G VKWF+ KG+GFI+ ++G D+FVH SAI+ +G+++L E VVE Sbjct: 1 MRGKVKWFDSKKGYGFITKDEGG-DVFVHWSAIEMEGFKTLKEGQVVE 47
>YBOX2_MOUSE (Q9Z2C8) Y-box-binding protein 2 (Germ cell-specific Y-box-binding| protein) (FRGY2 homolog) Length = 360 Score = 54.7 bits (130), Expect = 6e-08 Identities = 26/53 (49%), Positives = 36/53 (67%), Gaps = 4/53 (7%) Frame = +3 Query: 75 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDVVE 221 +V GTVKWFNV G+GFI+ D +D+FVHQ+AIK + RS+ + + VE Sbjct: 95 QVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVE 147
>YBOX2_HUMAN (Q9Y2T7) Y-box-binding protein 2 (Germ cell-specific Y-box-binding| protein) (Contrin) (MSY2 homolog) Length = 364 Score = 54.7 bits (130), Expect = 6e-08 Identities = 26/53 (49%), Positives = 36/53 (67%), Gaps = 4/53 (7%) Frame = +3 Query: 75 RVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDVVE 221 +V GTVKWFNV G+GFI+ D +D+FVHQ+AIK + RS+ + + VE Sbjct: 93 QVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVE 145
>CSPD_BACCE (Q45099) Cold shock-like protein cspD| Length = 66 Score = 54.3 bits (129), Expect = 8e-08 Identities = 26/45 (57%), Positives = 32/45 (71%) Frame = +3 Query: 84 GTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 G VKWFN KGFGFI E G +D+FVH SAI+ DG+++L E V Sbjct: 4 GKVKWFNGEKGFGFIEVE-GGEDVFVHFSAIQGDGFKTLEEGQEV 47
>CSPA_SHIBO (Q53816) Major cold shock protein (Fragment)| Length = 46 Score = 53.9 bits (128), Expect = 1e-07 Identities = 24/36 (66%), Positives = 30/36 (83%) Frame = +3 Query: 111 KGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 KGFGFI+P+DGS D+FVH SAI+ DGY+SL+E V Sbjct: 2 KGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKV 37
>CSPA_SALVI (Q56178) Major cold shock protein (Fragment)| Length = 46 Score = 53.9 bits (128), Expect = 1e-07 Identities = 24/36 (66%), Positives = 30/36 (83%) Frame = +3 Query: 111 KGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 KGFGFI+P+DGS D+FVH SAI+ DGY+SL+E V Sbjct: 2 KGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKV 37
>CSPA_ENTAE (Q46664) Major cold shock protein (Fragment)| Length = 46 Score = 53.9 bits (128), Expect = 1e-07 Identities = 24/36 (66%), Positives = 30/36 (83%) Frame = +3 Query: 111 KGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 KGFGFI+P+DGS D+FVH SAI+ DGY+SL+E V Sbjct: 2 KGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKV 37
>CSPA_CITFR (Q46051) Major cold shock protein (Fragment)| Length = 46 Score = 53.9 bits (128), Expect = 1e-07 Identities = 24/36 (66%), Positives = 30/36 (83%) Frame = +3 Query: 111 KGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 KGFGFI+P+DGS D+FVH SAI+ DGY+SL+E V Sbjct: 2 KGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKV 37
>CSPA_BACCR (Q81GQ6) Major cold shock protein cspA| Length = 67 Score = 53.9 bits (128), Expect = 1e-07 Identities = 27/47 (57%), Positives = 32/47 (68%) Frame = +3 Query: 78 VKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 V G VKWFN KGFGFI G +D+FVH SAI+ DG++SL E V Sbjct: 3 VTGQVKWFNNEKGFGFIEVP-GENDVFVHFSAIETDGFKSLEEGQKV 48
>CSPA_BACCE (Q45096) Major cold shock protein cspA| Length = 67 Score = 53.9 bits (128), Expect = 1e-07 Identities = 27/47 (57%), Positives = 32/47 (68%) Frame = +3 Query: 78 VKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 V G VKWFN KGFGFI G +D+FVH SAI+ DG++SL E V Sbjct: 3 VTGQVKWFNNEKGFGFIEVP-GENDVFVHFSAIETDGFKSLEEGQKV 48
>CSPA_BACAN (Q81TW8) Major cold shock protein cspA| Length = 67 Score = 53.9 bits (128), Expect = 1e-07 Identities = 27/47 (57%), Positives = 32/47 (68%) Frame = +3 Query: 78 VKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 V G VKWFN KGFGFI G +D+FVH SAI+ DG++SL E V Sbjct: 3 VTGQVKWFNNEKGFGFIEVP-GENDVFVHFSAIETDGFKSLEEGQKV 48
>YBOXH_APLCA (P41824) Y-box factor homolog (APY1)| Length = 253 Score = 53.5 bits (127), Expect = 1e-07 Identities = 25/59 (42%), Positives = 39/59 (66%), Gaps = 4/59 (6%) Frame = +3 Query: 57 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADG----YRSLNENDVVE 221 ++ + +V GTVKWFNV G+GFI+ +D +D+FVHQ+AI + RS+ + + VE Sbjct: 26 KKIIASQVSGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIVKNNPRKYLRSVGDGEKVE 84
>CSPA_KLEPN (Q48493) Major cold shock protein (Fragment)| Length = 46 Score = 53.1 bits (126), Expect = 2e-07 Identities = 23/37 (62%), Positives = 31/37 (83%) Frame = +3 Query: 108 TKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 +KGFGFISP+DGS D+FVH SAI++D +++LNE V Sbjct: 1 SKGFGFISPKDGSKDVFVHFSAIQSDSFKTLNEGQEV 37
>CSPB_BACST (P42016) Cold shock protein cspB (Major cold shock protein)| Length = 66 Score = 52.8 bits (125), Expect = 2e-07 Identities = 25/46 (54%), Positives = 33/46 (71%) Frame = +3 Query: 81 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 +G VKWFN KG+GFI E GS D+FVH +AI+ +G++SL E V Sbjct: 3 RGKVKWFNNEKGYGFIEVEGGS-DVFVHFTAIQGEGFKSLEEGQEV 47
>CSP_AQUAE (O67327) Cold shock-like protein| Length = 70 Score = 52.8 bits (125), Expect = 2e-07 Identities = 22/47 (46%), Positives = 35/47 (74%) Frame = +3 Query: 81 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 +GTVKWF+ KG+GFI+ ED + D+FVH + I+ +G+++L + VE Sbjct: 4 RGTVKWFSKDKGYGFITREDTNADVFVHFTDIQMEGFKTLQKGQKVE 50
>CSPB_BACGO (P41018) Cold shock protein cspB (Fragment)| Length = 57 Score = 52.4 bits (124), Expect = 3e-07 Identities = 24/43 (55%), Positives = 30/43 (69%) Frame = +3 Query: 90 VKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 +KWFN KGFGFI E G DD+FVH SAI+ +G++ L E V Sbjct: 1 IKWFNSEKGFGFIEVE-GQDDVFVHFSAIQGEGFKCLEEGQAV 42
>CSPB_BACCL (P41016) Cold shock protein cspB| Length = 66 Score = 51.6 bits (122), Expect = 5e-07 Identities = 24/46 (52%), Positives = 33/46 (71%) Frame = +3 Query: 81 KGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 +G VKWFN KG+GFI E GS D+FVH +AI+ +G+++L E V Sbjct: 3 RGKVKWFNNEKGYGFIEVEGGS-DVFVHFTAIQGEGFKTLEEGQEV 47
>CSPA_AERHY (Q44078) Major cold-shock protein (Fragment)| Length = 46 Score = 50.8 bits (120), Expect = 9e-07 Identities = 23/37 (62%), Positives = 29/37 (78%) Frame = +3 Query: 111 KGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 KGFGFISP DGS D+FVH SAI+ G+++L+E VE Sbjct: 2 KGFGFISPTDGSKDVFVHFSAIQTPGFKTLDEGQRVE 38
>CSPA_AERSA (Q44317) Major cold-shock protein (Fragment)| Length = 46 Score = 48.9 bits (115), Expect = 4e-06 Identities = 22/37 (59%), Positives = 29/37 (78%) Frame = +3 Query: 111 KGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 KGFGFISP DGS D+FVH SAI++ +++L+E VE Sbjct: 2 KGFGFISPADGSKDVFVHFSAIQSTSFKTLDEGQRVE 38
>CSPA_YEREN (Q56922) Major cold shock protein (Fragment)| Length = 46 Score = 48.5 bits (114), Expect = 5e-06 Identities = 21/37 (56%), Positives = 30/37 (81%) Frame = +3 Query: 111 KGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 KGFGFI+P DGS D+FVH SAI+++ +++L+E VE Sbjct: 2 KGFGFITPADGSKDVFVHFSAIQSNDFKTLDEGQKVE 38
>TAPA_PSEFR (P72191) Temperature acclimation protein A (E7.0) (Fragment)| Length = 59 Score = 45.8 bits (107), Expect = 3e-05 Identities = 23/40 (57%), Positives = 28/40 (70%) Frame = +3 Query: 99 FNVTKGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 FN KGFGFI+PE G DLFVH AI+ +G++SL E V Sbjct: 1 FNDEKGFGFITPESG-PDLFVHFRAIQGNGFKSLKEGQKV 39
>CSDC2_RAT (Q63430) Cold shock domain-containing protein C2 (RNA-binding| protein PIPPin) Length = 154 Score = 44.3 bits (103), Expect = 9e-05 Identities = 20/43 (46%), Positives = 29/43 (67%) Frame = +3 Query: 57 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKAD 185 R G KG K F+ ++G GFI+PE+GS+D+FVH S I+ + Sbjct: 63 RASAGPVFKGVCKQFSRSQGHGFITPENGSEDIFVHVSDIEGE 105
>CSDC2_MOUSE (Q91YQ3) Cold shock domain-containing protein C2 (RNA-binding| protein PIPPin) Length = 154 Score = 44.3 bits (103), Expect = 9e-05 Identities = 20/43 (46%), Positives = 29/43 (67%) Frame = +3 Query: 57 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKAD 185 R G KG K F+ ++G GFI+PE+GS+D+FVH S I+ + Sbjct: 63 RASAGPVFKGVCKQFSRSQGHGFITPENGSEDIFVHVSDIEGE 105
>CSDC2_HUMAN (Q9Y534) Cold shock domain-containing protein C2 (RNA-binding| protein PIPPin) Length = 153 Score = 44.3 bits (103), Expect = 9e-05 Identities = 20/43 (46%), Positives = 29/43 (67%) Frame = +3 Query: 57 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKAD 185 R G KG K F+ ++G GFI+PE+GS+D+FVH S I+ + Sbjct: 62 RASAGPVFKGVCKQFSRSQGHGFITPENGSEDIFVHVSDIEGE 104
>CSPA_STRDY (Q53984) Major cold shock protein (Fragment)| Length = 45 Score = 41.6 bits (96), Expect = 6e-04 Identities = 20/37 (54%), Positives = 27/37 (72%) Frame = +3 Query: 111 KGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVVE 221 KGFGFIS E+G D +F H SAI+ +G+++L E VE Sbjct: 2 KGFGFISTENGQD-VFAHFSAIQTNGFKTLEEGQKVE 37
>CSPA_PHOPO (Q52287) Major cold shock protein (Fragment)| Length = 46 Score = 40.0 bits (92), Expect = 0.002 Identities = 17/36 (47%), Positives = 26/36 (72%) Frame = +3 Query: 111 KGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 KGFGFI+ ++G D+FVH AI ++G+++L E V Sbjct: 2 KGFGFITQDNGGADVFVHFRAIASEGFKTLAEGQKV 37
>CSPA_STRPY (P0C0F0) Major cold shock protein (Fragment)| Length = 45 Score = 39.7 bits (91), Expect = 0.002 Identities = 19/36 (52%), Positives = 26/36 (72%) Frame = +3 Query: 111 KGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 KGFGFIS E+G D +F H SAI+ +G+++L E V Sbjct: 2 KGFGFISTENGQD-VFAHFSAIQTNGFKTLEEGQKV 36
>CHSP1_MOUSE (Q9CR86) Calcium-regulated heat stable protein 1 (Calcium-regulated| heat-stable protein of 24 kDa) (CRHSP-24) Length = 148 Score = 39.7 bits (91), Expect = 0.002 Identities = 18/43 (41%), Positives = 25/43 (58%) Frame = +3 Query: 57 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKAD 185 R G KG K F +KG GFI+P DG D+F+H S ++ + Sbjct: 57 RASQGPVYKGVCKCFCRSKGHGFITPADGGPDIFLHISDVEGE 99
>CHSP1_RAT (Q9WU49) Calcium-regulated heat stable protein 1 (Calcium-regulated| heat-stable protein of 24 kDa) (CRHSP-24) Length = 147 Score = 39.7 bits (91), Expect = 0.002 Identities = 18/43 (41%), Positives = 25/43 (58%) Frame = +3 Query: 57 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKAD 185 R G KG K F +KG GFI+P DG D+F+H S ++ + Sbjct: 56 RASQGPVYKGVCKCFCRSKGHGFITPADGGPDIFLHISDVEGE 98
>CHSP1_HUMAN (Q9Y2V2) Calcium-regulated heat stable protein 1 (Calcium-regulated| heat-stable protein of 24 kDa) (CRHSP-24) Length = 147 Score = 39.7 bits (91), Expect = 0.002 Identities = 18/43 (41%), Positives = 25/43 (58%) Frame = +3 Query: 57 RRKMGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIKAD 185 R G KG K F +KG GFI+P DG D+F+H S ++ + Sbjct: 56 RASQGPVYKGVCKCFCRSKGHGFITPADGGPDIFLHISDVEGE 98
>CSPA_PHOMO (Q51929) Major cold shock protein (Fragment)| Length = 46 Score = 39.3 bits (90), Expect = 0.003 Identities = 16/36 (44%), Positives = 25/36 (69%) Frame = +3 Query: 111 KGFGFISPEDGSDDLFVHQSAIKADGYRSLNENDVV 218 KGFGF++ +G D+FVH AI ++G+++L E V Sbjct: 2 KGFGFLTQNNGGADVFVHFRAIASEGFKTLTEGQKV 37
>CSPS_STRTR (P81622) Cold shock protein CspSt (Fragment)| Length = 21 Score = 37.7 bits (86), Expect = 0.008 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = +3 Query: 84 GTVKWFNVTKGFGFISPED 140 GTVKWFN KGFGFI+ ED Sbjct: 3 GTVKWFNAEKGFGFITSED 21
>CSPH_SALTY (P0A1D9) Cold shock-like protein cspH| Length = 70 Score = 34.3 bits (77), Expect = 0.090 Identities = 16/38 (42%), Positives = 22/38 (57%) Frame = +3 Query: 66 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIK 179 M ++ G VK F+ G G I+P DG D+ VH SA + Sbjct: 1 MSRKMTGIVKTFDCKSGKGLITPSDGRKDVQVHISACR 38
>CSPH_SALTI (P0A1E0) Cold shock-like protein cspH| Length = 70 Score = 34.3 bits (77), Expect = 0.090 Identities = 16/38 (42%), Positives = 22/38 (57%) Frame = +3 Query: 66 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAIK 179 M ++ G VK F+ G G I+P DG D+ VH SA + Sbjct: 1 MSRKMTGIVKTFDCKSGKGLITPSDGRKDVQVHISACR 38
>CSPH_SHIFL (P0A985) Cold shock-like protein cspH (CSP-H)| Length = 70 Score = 32.7 bits (73), Expect = 0.26 Identities = 16/36 (44%), Positives = 21/36 (58%) Frame = +3 Query: 66 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSA 173 M ++ G VK F+ G GFI P DG ++ VH SA Sbjct: 1 MSRKMTGIVKTFDRKSGKGFIIPSDGRKEVQVHISA 36
>CSPH_ECOLI (P0A982) Cold shock-like protein cspH (CSP-H)| Length = 70 Score = 32.7 bits (73), Expect = 0.26 Identities = 16/36 (44%), Positives = 21/36 (58%) Frame = +3 Query: 66 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSA 173 M ++ G VK F+ G GFI P DG ++ VH SA Sbjct: 1 MSRKMTGIVKTFDRKSGKGFIIPSDGRKEVQVHISA 36
>CSPH_ECOL6 (P0A983) Cold shock-like protein cspH (CSP-H)| Length = 70 Score = 32.7 bits (73), Expect = 0.26 Identities = 16/36 (44%), Positives = 21/36 (58%) Frame = +3 Query: 66 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSA 173 M ++ G VK F+ G GFI P DG ++ VH SA Sbjct: 1 MSRKMTGIVKTFDRKSGKGFIIPSDGRKEVQVHISA 36
>CSPH_ECO57 (P0A984) Cold shock-like protein cspH (CSP-H)| Length = 70 Score = 32.7 bits (73), Expect = 0.26 Identities = 16/36 (44%), Positives = 21/36 (58%) Frame = +3 Query: 66 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSA 173 M ++ G VK F+ G GFI P DG ++ VH SA Sbjct: 1 MSRKMTGIVKTFDRKSGKGFIIPSDGRKEVQVHISA 36
>CSPF_ECOLI (P0A976) Cold shock-like protein cspF (CSP-F)| Length = 70 Score = 32.3 bits (72), Expect = 0.34 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +3 Query: 66 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAI 176 M ++ G VK F+ G G I+P DG D+ +H SA+ Sbjct: 1 MSRKMTGIVKTFDGKSGKGLITPSDGRIDVQLHVSAL 37
>CSPF_ECOL6 (P0A977) Cold shock-like protein cspF (CSP-F)| Length = 70 Score = 32.3 bits (72), Expect = 0.34 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +3 Query: 66 MGERVKGTVKWFNVTKGFGFISPEDGSDDLFVHQSAI 176 M ++ G VK F+ G G I+P DG D+ +H SA+ Sbjct: 1 MSRKMTGIVKTFDGKSGKGLITPSDGRIDVQLHVSAL 37
>FAS2_CANAL (P43098) Fatty acid synthase alpha subunit (EC 2.3.1.86) [Includes:| Acyl carrier; 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100) (Beta-ketoacyl reductase); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41) (Beta-ketoacyl synth Length = 1885 Score = 30.0 bits (66), Expect = 1.7 Identities = 12/58 (20%), Positives = 32/58 (55%), Gaps = 4/58 (6%) Frame = +3 Query: 6 HHTDLGFPARVLVLRFRRRKMGERVKGTVKWFNVTKGF----GFISPEDGSDDLFVHQ 167 HH +L +P+ +L +++R+R++ +R++ W + ++ E+ D+ +H+ Sbjct: 1431 HHGNLKYPSPLLNIKYRKRQLNKRLEQIKSWEETELSYLQEEAELAKEEFGDEFSMHE 1488
>RNR_THIFE (P54084) Ribonuclease R (EC 3.1.-.-) (RNase R) (VacB protein| homolog) (Fragment) Length = 439 Score = 28.1 bits (61), Expect = 6.4 Identities = 15/30 (50%), Positives = 18/30 (60%) Frame = +3 Query: 72 ERVKGTVKWFNVTKGFGFISPEDGSDDLFV 161 E V+GTV GFGF+ PE G DLF+ Sbjct: 92 ELVRGTVSAH--PDGFGFLIPEAGGKDLFL 119
>DXS_GLOVI (Q7NP63) 1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7)| (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS) Length = 638 Score = 27.7 bits (60), Expect = 8.4 Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 26/74 (35%) Frame = +3 Query: 72 ERVKGTVKWFNVTK----------GFGFISPEDGSD----------------DLFVHQSA 173 ER K TVK+ +T+ GF ++ P DG + +F+H Sbjct: 224 ERFKDTVKYMTMTRSKAGVIFEELGFTYLGPIDGHNLGDLIETFEFAHSLPGPVFLHAIT 283 Query: 174 IKADGYRSLNENDV 215 +K GY +N + Sbjct: 284 VKGKGYEVAEQNQI 297
>RPOB_SYNEL (Q8DL55) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1108 Score = 27.7 bits (60), Expect = 8.4 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%) Frame = -3 Query: 211 SFSLRLR*PSALMADWWTKRSSLPS---SGEMKPNPLVTL 101 SF + +R +L D +++S+PS GEMKP+P V L Sbjct: 1037 SFKVLMRELQSLCLDISVRKASIPSFDDDGEMKPDPEVDL 1076 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 21,302,741 Number of Sequences: 219361 Number of extensions: 329151 Number of successful extensions: 1292 Number of sequences better than 10.0: 143 Number of HSP's better than 10.0 without gapping: 1248 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1260 length of database: 80,573,946 effective HSP length: 49 effective length of database: 69,825,257 effective search space used: 1675806168 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
