ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast48h07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_550488.1| Oryza sativa (japonica cultivar-group), mRNA 188 8e-45
2dbj|AK104301.1| Oryza sativa (japonica cultivar-group) cDNA clon... 188 8e-45
3dbj|AK099246.1| Oryza sativa (japonica cultivar-group) cDNA clon... 188 8e-45
4dbj|AK074027.1| Oryza sativa (japonica cultivar-group) cDNA clon... 188 8e-45
5dbj|AK061483.1| Oryza sativa (japonica cultivar-group) cDNA clon... 188 8e-45
6gb|AY104371.1| Zea mays PCO121406 mRNA sequence 176 3e-41
7dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 137 3e-29
8dbj|AP001552.1| Oryza sativa (japonica cultivar-group) geneomic ... 137 3e-29
9emb|AL845294.3| Mouse DNA sequence from clone RP23-285N19 on chr... 48 0.020
10dbj|AK067019.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.020
11emb|AL732525.13| Mouse DNA sequence from clone RP23-358I10 on ch... 46 0.077
12ref|XM_473954.1| Oryza sativa (japonica cultivar-group), predic... 44 0.30
13gb|AC161807.12| Mus musculus chromosome 1, clone RP24-229G16, co... 44 0.30
14gb|AC120543.7| Mus musculus chromosome 8, clone RP23-330A24, com... 44 0.30
15emb|AL157904.24| Human DNA sequence from clone RP4-753F5 on chro... 44 0.30
16emb|AL137143.8| Human DNA sequence from clone RP11-207N4 on chro... 44 0.30
17gb|AF275879.1|AF275879 Homo sapiens Friend leukemia virus integr... 44 0.30
18dbj|AK070522.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.30
19dbj|AP001122.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 44 0.30
20gb|AC117749.6| Mus musculus chromosome 1, clone RP24-319I19, com... 44 0.30
21gb|AC002525.1|AC002525 Human PAC clone 257C22A from 13q12-q13, c... 44 0.30
22gb|AC153727.6| Mus musculus BAC clone RP23-354L15 from chromosom... 42 1.2
23gb|AC166973.5| Mus musculus chromosome 1, clone RP24-372J6, comp... 42 1.2
24gb|AC111023.12| Mus musculus chromosome 19, clone RP23-221A9, co... 42 1.2
25gb|AC131915.7| Mus musculus chromosome 5, clone RP24-491C20, com... 42 1.2
26gb|AC132919.9| Mus musculus chromosome 12, clone RP24-356H3, com... 42 1.2
27ref|XM_986810.1| PREDICTED: Mus musculus neurotrophic tyrosine k... 42 1.2
28ref|XM_986774.1| PREDICTED: Mus musculus neurotrophic tyrosine k... 42 1.2
29ref|XM_986852.1| PREDICTED: Mus musculus neurotrophic tyrosine k... 42 1.2
30ref|XM_986890.1| PREDICTED: Mus musculus neurotrophic tyrosine k... 42 1.2
31ref|XM_920900.2| PREDICTED: Mus musculus neurotrophic tyrosine k... 42 1.2
32ref|XM_920892.2| PREDICTED: Mus musculus neurotrophic tyrosine k... 42 1.2
33ref|XM_920908.2| PREDICTED: Mus musculus neurotrophic tyrosine k... 42 1.2
34ref|XM_908571.2| PREDICTED: Mus musculus neurotrophic tyrosine k... 42 1.2
35ref|XM_899800.2| PREDICTED: Mus musculus neurotrophic tyrosine k... 42 1.2
36ref|XM_899794.2| PREDICTED: Mus musculus neurotrophic tyrosine k... 42 1.2
37ref|XM_899803.2| PREDICTED: Mus musculus neurotrophic tyrosine k... 42 1.2
38ref|XM_283871.3| PREDICTED: Mus musculus neurotrophic tyrosine k... 42 1.2
39gb|AC122439.4| Mus musculus BAC clone RP24-222B4 from chromosome... 42 1.2
40gb|AC125410.4| Mus musculus BAC clone RP23-146N3 from 3, complet... 42 1.2
41gb|AC125408.3| Mus musculus BAC clone RP23-94M23 from 3, complet... 42 1.2
42emb|CR718225.2|CNS0GH4N Tetraodon nigroviridis full-length cDNA 42 1.2
43gb|AC007008.3| Homo sapiens BAC clone RP11-554O7 from 7, complet... 42 1.2
44gb|AC158131.4| Mus musculus chromosome 19, clone RP24-398D6, com... 42 1.2
45emb|BX883042.1| Rattus norvegicus chromosome 20, major histocomp... 42 1.2
46gb|AC164558.2| Mus musculus BAC clone RP23-238F5 from chromosome... 42 1.2
47gb|AC158143.6| Mus musculus chromosome 5, clone RP23-409I5, comp... 42 1.2
48dbj|AK148691.1| Mus musculus 2 days neonate sympathetic ganglion... 42 1.2
49gb|AF312225.1|AF312225 Homo sapiens chromosome 2 map 2q37.1, com... 42 1.2
50gb|AC155824.3| Mus musculus BAC clone RP23-136L1 from chromosome... 42 1.2
51gb|AC161454.3| Mus musculus BAC clone RP23-332F10 from chromosom... 42 1.2
52gb|AC006329.5| Homo sapiens BAC clone RP11-132A1 from 7, complet... 42 1.2
53dbj|AK081588.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 42 1.2
54gb|AC155242.2| Mus musculus BAC clone RP24-496G24 from chromosom... 42 1.2
55gb|BC051596.1| Mus musculus neurotrophic tyrosine kinase, recept... 42 1.2
56gb|AC138658.1| Homo sapiens BAC clone RP11-95H14 from 2, complet... 42 1.2
57gb|AC093374.4| Homo sapiens BAC clone RP13-650L7 from 2, complet... 42 1.2
58gb|AC116118.16| Mus musculus chromosome 16, clone RP23-73P19, co... 42 1.2
59emb|CT010490.10| Mouse DNA sequence from clone RP23-148P12 on ch... 42 1.2
60gb|AC132587.5| Mus musculus BAC clone RP24-372N16 from 12, compl... 42 1.2
61gb|AC140224.4| Mus musculus BAC clone RP24-483E8 from 1, complet... 42 1.2
62gb|AC140457.3| Mus musculus BAC clone RP23-15F7 from 12, complet... 42 1.2
63gb|AC125067.4| Mus musculus BAC clone RP23-431C5 from 12, comple... 42 1.2
64emb|AL662895.7| Mouse DNA sequence from clone RP23-340L19 on chr... 42 1.2
65emb|AL645947.9| Mouse DNA sequence from clone RP23-338K8 on chro... 42 1.2
66gb|AC105163.12| Mus musculus chromosome 3, clone RP24-163F11, co... 40 4.8
67gb|AC118708.4| Mus musculus chromosome 7, clone RP24-118K11, com... 40 4.8
68ref|XM_506161.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 4.8
69gb|AC147651.4| Homo sapiens BAC clone RP13-689E11 from 7, comple... 40 4.8
70gb|AY453411.1| Usutu virus strain Vienna 2001 from Austria, comp... 40 4.8
71gb|AC106595.9| Rattus norvegicus 7 BAC CH230-237N20 (Children's ... 40 4.8
72gb|AC147375.3| Mus musculus BAC clone RP24-159O13 from chromosom... 40 4.8
73gb|AC140478.2| Mus musculus BAC clone RP24-149A3 from chromosome... 40 4.8
74gb|AC140267.2| Mus musculus BAC clone RP24-303O5 from chromosome... 40 4.8
75gb|AC140286.3| Mus musculus BAC clone RP24-573E14 from chromosom... 40 4.8
76gb|BT013318.1| Lycopersicon esculentum clone 135005F, mRNA sequence 40 4.8
77gb|AC164304.2| Mus musculus BAC clone RP23-261B24 from chromosom... 40 4.8
78gb|AC164316.3| Mus musculus BAC clone RP23-16B4 from chromosome ... 40 4.8
79gb|AY330343.1| Odocoileus hemionus prion protein (prnp) gene, co... 40 4.8
80gb|AC135670.3| Mus musculus BAC clone RP23-370D21 from chromosom... 40 4.8
81gb|AC133077.4| Mus musculus BAC clone RP24-423E10 from chromosom... 40 4.8
82emb|CT010524.6| Mouse DNA sequence from clone RP23-341L7 on chro... 40 4.8
83emb|AJ567108.1|GHI567108 Gossypium hirsutum microsatellite DNA m... 40 4.8
84gb|AC131744.3| Mus musculus BAC clone RP23-50E10 from chromosome... 40 4.8
85gb|AC026261.8| Homo sapiens chromosome 8, clone RP11-610E3, comp... 40 4.8
86emb|CR956354.1| Wallaby DNA sequence from clone GRWB-143H14, com... 40 4.8
87gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 4.8
88emb|AL136380.22| Human DNA sequence from clone RP5-882O7 on chro... 40 4.8
89emb|AL121584.24|HSBA388K2 Human DNA sequence from clone RP11-388... 40 4.8
90gb|AC026761.17| Mus musculus Strain 129S6/SvEvTac chromosome 19 ... 40 4.8
91gb|AC163347.4| Mus musculus BAC clone RP23-259F13 from chromosom... 40 4.8
92gb|AC164168.3| Mus musculus 6 BAC RP23-343D21 (Roswell Park Canc... 40 4.8
93gb|AC161890.4| Mus musculus 6 BAC RP23-356P12 (Roswell Park Canc... 40 4.8
94emb|AL645943.19| Mouse DNA sequence from clone RP23-130E22 on ch... 40 4.8
95gb|AC021621.9| Homo sapiens chromosome 8, clone RP11-356M23, com... 40 4.8
96gb|AC154642.2| Mus musculus BAC clone RP23-277C14 from chromosom... 40 4.8
97gb|AC161880.5| Mus musculus BAC clone RP23-261N13 from chromosom... 40 4.8
98gb|AC155313.2| Mus musculus BAC clone RP23-349D10 from chromosom... 40 4.8
99gb|AC010616.5|AC010616 Homo sapiens chromosome 19 clone CTD-2575... 40 4.8
100dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
101dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
102gb|AC021301.6|AC021301 Homo sapiens chromosome 8, clone RP11-411... 40 4.8
103gb|AC155659.6| Mus musculus 6 BAC RP24-68F17 (Roswell Park Cance... 40 4.8
104dbj|AP003451.4| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
105ref|XM_580014.1| PREDICTED: Rattus norvegicus LOC499775 (LOC4997... 40 4.8
106gb|AC007240.2| Homo sapiens BAC clone RP11-83M8 from 2, complete... 40 4.8
107gb|AC068947.17| Mus Musculus Strain C57BL6/J Chromosome 3 BAC, R... 40 4.8
108dbj|AP004263.4| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
109emb|AL928584.23| Mouse DNA sequence from clone RP23-251I16 on ch... 40 4.8
110dbj|BS000196.1| Pan troglodytes chromosome 22 clone:RP43-025M10,... 40 4.8
111dbj|AK102834.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.8
112gb|AC154591.2| Mus musculus BAC clone RP23-370M19 from 16, compl... 40 4.8
113emb|AJ238420.1|HSA238420 Homo sapiens PDGFA gene for platelet-de... 40 4.8
114gb|AC120412.12| Mus musculus chromosome 5, clone RP24-447P14, co... 40 4.8
115gb|BC109246.1| Homo sapiens cDNA clone MGC:129780 IMAGE:40019131... 40 4.8
116gb|AC122513.5| Mus musculus BAC clone RP24-455A5 from 3, complet... 40 4.8
117gb|AC113480.8| Mus musculus chromosome 13, clone RP23-309D8, com... 40 4.8
118emb|AL844198.7| Mouse DNA sequence from clone RP23-438P13 on chr... 40 4.8
119gb|AC171502.2| Mus musculus BAC clone RP23-242G4 from chromosome... 40 4.8
120emb|AL626765.22| Mouse DNA sequence from clone RP23-179N14 on ch... 40 4.8
121emb|AL772296.6| Mouse DNA sequence from clone RP23-66O9 on chrom... 40 4.8 
>ref|XM_550488.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1027

 Score =  188 bits (95), Expect = 8e-45
 Identities = 137/151 (90%)
 Strand = Plus / Plus

                                                                       
Query: 208 gccggtgaggagtgtgaaggtcacaaatgtttcccttagtgcaactgagcaagacattaa 267
           ||||||||||| |||||||||||| ||||| ||||| |||||||||| ||||||||||||
Sbjct: 130 gccggtgaggactgtgaaggtcaccaatgtctccctgagtgcaactgtgcaagacattaa 189

                                                                       
Query: 268 ggaattcttttctttttcaggagacattgaacatgtggatatgaaaagtggtgacgagtg 327
           ||| |||||||| |||||||||||||||||||||||||| ||| ||||||| || |||||
Sbjct: 190 ggagttcttttcattttcaggagacattgaacatgtggagatgcaaagtggcgatgagtg 249

                                          
Query: 328 gtctcaagttgcatatgttacctttaaagat 358
           |||||||||||||||||| || || ||||||
Sbjct: 250 gtctcaagttgcatatgtgactttcaaagat 280
to top
>dbj|AK104301.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-A08, full
           insert sequence
          Length = 1143

 Score =  188 bits (95), Expect = 8e-45
 Identities = 137/151 (90%)
 Strand = Plus / Plus

                                                                       
Query: 208 gccggtgaggagtgtgaaggtcacaaatgtttcccttagtgcaactgagcaagacattaa 267
           ||||||||||| |||||||||||| ||||| ||||| |||||||||| ||||||||||||
Sbjct: 130 gccggtgaggactgtgaaggtcaccaatgtctccctgagtgcaactgtgcaagacattaa 189

                                                                       
Query: 268 ggaattcttttctttttcaggagacattgaacatgtggatatgaaaagtggtgacgagtg 327
           ||| |||||||| |||||||||||||||||||||||||| ||| ||||||| || |||||
Sbjct: 190 ggagttcttttcattttcaggagacattgaacatgtggagatgcaaagtggcgatgagtg 249

                                          
Query: 328 gtctcaagttgcatatgttacctttaaagat 358
           |||||||||||||||||| || || ||||||
Sbjct: 250 gtctcaagttgcatatgtgactttcaaagat 280
to top
>dbj|AK099246.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116H22, full
           insert sequence
          Length = 1193

 Score =  188 bits (95), Expect = 8e-45
 Identities = 137/151 (90%)
 Strand = Plus / Plus

                                                                       
Query: 208 gccggtgaggagtgtgaaggtcacaaatgtttcccttagtgcaactgagcaagacattaa 267
           ||||||||||| |||||||||||| ||||| ||||| |||||||||| ||||||||||||
Sbjct: 133 gccggtgaggactgtgaaggtcaccaatgtctccctgagtgcaactgtgcaagacattaa 192

                                                                       
Query: 268 ggaattcttttctttttcaggagacattgaacatgtggatatgaaaagtggtgacgagtg 327
           ||| |||||||| |||||||||||||||||||||||||| ||| ||||||| || |||||
Sbjct: 193 ggagttcttttcattttcaggagacattgaacatgtggagatgcaaagtggcgatgagtg 252

                                          
Query: 328 gtctcaagttgcatatgttacctttaaagat 358
           |||||||||||||||||| || || ||||||
Sbjct: 253 gtctcaagttgcatatgtgactttcaaagat 283
to top
>dbj|AK074027.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076C18, full
           insert sequence
          Length = 1026

 Score =  188 bits (95), Expect = 8e-45
 Identities = 137/151 (90%)
 Strand = Plus / Plus

                                                                       
Query: 208 gccggtgaggagtgtgaaggtcacaaatgtttcccttagtgcaactgagcaagacattaa 267
           ||||||||||| |||||||||||| ||||| ||||| |||||||||| ||||||||||||
Sbjct: 129 gccggtgaggactgtgaaggtcaccaatgtctccctgagtgcaactgtgcaagacattaa 188

                                                                       
Query: 268 ggaattcttttctttttcaggagacattgaacatgtggatatgaaaagtggtgacgagtg 327
           ||| |||||||| |||||||||||||||||||||||||| ||| ||||||| || |||||
Sbjct: 189 ggagttcttttcattttcaggagacattgaacatgtggagatgcaaagtggcgatgagtg 248

                                          
Query: 328 gtctcaagttgcatatgttacctttaaagat 358
           |||||||||||||||||| || || ||||||
Sbjct: 249 gtctcaagttgcatatgtgactttcaaagat 279
to top
>dbj|AK061483.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-H08, full
           insert sequence
          Length = 1147

 Score =  188 bits (95), Expect = 8e-45
 Identities = 137/151 (90%)
 Strand = Plus / Plus

                                                                       
Query: 208 gccggtgaggagtgtgaaggtcacaaatgtttcccttagtgcaactgagcaagacattaa 267
           ||||||||||| |||||||||||| ||||| ||||| |||||||||| ||||||||||||
Sbjct: 134 gccggtgaggactgtgaaggtcaccaatgtctccctgagtgcaactgtgcaagacattaa 193

                                                                       
Query: 268 ggaattcttttctttttcaggagacattgaacatgtggatatgaaaagtggtgacgagtg 327
           ||| |||||||| |||||||||||||||||||||||||| ||| ||||||| || |||||
Sbjct: 194 ggagttcttttcattttcaggagacattgaacatgtggagatgcaaagtggcgatgagtg 253

                                          
Query: 328 gtctcaagttgcatatgttacctttaaagat 358
           |||||||||||||||||| || || ||||||
Sbjct: 254 gtctcaagttgcatatgtgactttcaaagat 284
to top
>gb|AY104371.1| Zea mays PCO121406 mRNA sequence
          Length = 1266

 Score =  176 bits (89), Expect = 3e-41
 Identities = 152/173 (87%)
 Strand = Plus / Plus

                                                                       
Query: 186 cggttgaggtccccgtggcggcgccggtgaggagtgtgaaggtcacaaatgtttccctta 245
           |||| ||||| ||||||| ||||||||||||||  ||||||||||| ||||| || ||||
Sbjct: 161 cggtggaggttcccgtggaggcgccggtgaggacagtgaaggtcaccaatgtctctctta 220

                                                                       
Query: 246 gtgcaactgagcaagacattaaggaattcttttctttttcaggagacattgaacatgtgg 305
           ||||||||| ||||||||||||||| |||||||| ||||||||||| ||||| |||||||
Sbjct: 221 gtgcaactgtgcaagacattaaggagttcttttccttttcaggagatattgatcatgtgg 280

                                                                
Query: 306 atatgaaaagtggtgacgagtggtctcaagttgcatatgttacctttaaagat 358
           | ||| | |||||||| |||||||| |||||||||||||| || || ||||||
Sbjct: 281 agatgcagagtggtgatgagtggtcccaagttgcatatgtcactttcaaagat 333
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score =  137 bits (69), Expect = 3e-29
 Identities = 96/105 (91%)
 Strand = Plus / Plus

                                                                          
Query: 211    ggtgaggagtgtgaaggtcacaaatgtttcccttagtgcaactgagcaagacattaagga 270
              |||||||| |||||||||||| ||||| ||||| |||||||||| |||||||||||||||
Sbjct: 699176 ggtgaggactgtgaaggtcaccaatgtctccctgagtgcaactgtgcaagacattaagga 699235

                                                           
Query: 271    attcttttctttttcaggagacattgaacatgtggatatgaaaag 315
               |||||||| |||||||||||||||||||||||||| ||| ||||
Sbjct: 699236 gttcttttcattttcaggagacattgaacatgtggagatgcaaag 699280



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                           
Query: 314    agtggtgacgagtggtctcaagttgcatatgttacctttaaagat 358
              ||||| || ||||||||||||||||||||||| || || ||||||
Sbjct: 699380 agtggcgatgagtggtctcaagttgcatatgtgactttcaaagat 699424
to top
>dbj|AP001552.1| Oryza sativa (japonica cultivar-group) geneomic DNA, chromosome 6, PAC
              clone:P0029D06
          Length = 150120

 Score =  137 bits (69), Expect = 3e-29
 Identities = 96/105 (91%)
 Strand = Plus / Plus

                                                                          
Query: 211    ggtgaggagtgtgaaggtcacaaatgtttcccttagtgcaactgagcaagacattaagga 270
              |||||||| |||||||||||| ||||| ||||| |||||||||| |||||||||||||||
Sbjct: 105604 ggtgaggactgtgaaggtcaccaatgtctccctgagtgcaactgtgcaagacattaagga 105663

                                                           
Query: 271    attcttttctttttcaggagacattgaacatgtggatatgaaaag 315
               |||||||| |||||||||||||||||||||||||| ||| ||||
Sbjct: 105664 gttcttttcattttcaggagacattgaacatgtggagatgcaaag 105708



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                           
Query: 314    agtggtgacgagtggtctcaagttgcatatgttacctttaaagat 358
              ||||| || ||||||||||||||||||||||| || || ||||||
Sbjct: 105808 agtggcgatgagtggtctcaagttgcatatgtgactttcaaagat 105852
to top
>emb|AL845294.3| Mouse DNA sequence from clone RP23-285N19 on chromosome 4 Contains a
              ribosomal protein L9 (Rpl9) pseudogene, a cysteine-rich
              secretory protein 1 (Crisp1) pseudogene and a eukaryotic
              translation initiation factor 1A (Eif1a) pseudogene,
              complete sequence
          Length = 167418

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 266    aaggaattcttttctttttcagga 289
              ||||||||||||||||||||||||
Sbjct: 150540 aaggaattcttttctttttcagga 150517
to top
>dbj|AK067019.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089A03, full
           insert sequence
          Length = 1318

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                       
Query: 266 aaggaattcttttctttttcaggagacattgaacatgtggatatgaaaagtggtgacgag 325
           |||||||||||||| ||||| || |||||||  ||||| || ||| ||||  |||| |||
Sbjct: 169 aaggaattcttttccttttctggtgacattgtgcatgttgaaatgcaaagcagtgatgag 228

                                           
Query: 326 tggtctcaagttgcatatgttacctttaaaga 357
             |||||||||||| ||  |||| ||||||||
Sbjct: 229 ctgtctcaagttgcctacattacttttaaaga 260
to top
>emb|AL732525.13| Mouse DNA sequence from clone RP23-358I10 on chromosome 2, complete
              sequence
          Length = 220495

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 39     ctccctccctccccctccacttc 61
              |||||||||||||||||||||||
Sbjct: 192026 ctccctccctccccctccacttc 192004
to top
>ref|XM_473954.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1131

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 272 ttcttttctttttcaggagacattgaacatgtggatatgaaaagtggtgacgagtggtct 331
           |||||||| ||||| || | ||| | |||||| || ||| |||||||||||||| |||||
Sbjct: 64  ttcttttccttttccggtgtcatcgtacatgttgaaatgcaaagtggtgacgagcggtct 123

             
Query: 332 ca 333
           ||
Sbjct: 124 ca 125
to top
>gb|AC161807.12| Mus musculus chromosome 1, clone RP24-229G16, complete sequence
          Length = 144324

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 32    aagtcgtctccctccctccccc 53
             ||||||||||||||||||||||
Sbjct: 98194 aagtcgtctccctccctccccc 98173
to top
>gb|AC120543.7| Mus musculus chromosome 8, clone RP23-330A24, complete sequence
          Length = 210696

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 38    tctccctccctccccctccacttcca 63
             |||||||||||||||||| |||||||
Sbjct: 91254 tctccctccctccccctctacttcca 91229
to top
>emb|AL157904.24| Human DNA sequence from clone RP4-753F5 on chromosome 1p13.1-13.3
             Contains the 5' end of the PTGFRN gene for prostaglandin
             F2 receptor negative regulator and a CpG island, complete
             sequence
          Length = 117134

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 35    tcgtctccctccctccccctcc 56
             ||||||||||||||||||||||
Sbjct: 84506 tcgtctccctccctccccctcc 84527
to top
>emb|AL137143.8| Human DNA sequence from clone RP11-207N4 on chromosome 13 Contains the
             5' end of a novel gene (CG003, 13CDNA73), a novel gene and
             2 CpG islands, complete sequence
          Length = 155151

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 8     tcccactactagtactctagca 29
             ||||||||||||||||||||||
Sbjct: 32697 tcccactactagtactctagca 32718
to top
>gb|AF275879.1|AF275879 Homo sapiens Friend leukemia virus integration 1 (FLI1) gene, partial
            cds, alternatively spliced
          Length = 4658

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 35   tcgtctccctccctccccctcc 56
            ||||||||||||||||||||||
Sbjct: 2780 tcgtctccctccctccccctcc 2759
to top
>dbj|AK070522.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056J16, full
           insert sequence
          Length = 1429

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 272 ttcttttctttttcaggagacattgaacatgtggatatgaaaagtggtgacgagtggtct 331
           |||||||| ||||| || | ||| | |||||| || ||| |||||||||||||| |||||
Sbjct: 144 ttcttttccttttccggtgtcatcgtacatgttgaaatgcaaagtggtgacgagcggtct 203

             
Query: 332 ca 333
           ||
Sbjct: 204 ca 205
to top
>dbj|AP001122.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-744N12, complete
             sequence
          Length = 217393

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 35    tcgtctccctccctccccctcc 56
             ||||||||||||||||||||||
Sbjct: 44068 tcgtctccctccctccccctcc 44047
to top
>gb|AC117749.6| Mus musculus chromosome 1, clone RP24-319I19, complete sequence
          Length = 174793

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 32     aagtcgtctccctccctccccc 53
              ||||||||||||||||||||||
Sbjct: 167786 aagtcgtctccctccctccccc 167807
to top
>gb|AC002525.1|AC002525 Human PAC clone 257C22A from 13q12-q13, complete sequence
          Length = 140942

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 8      tcccactactagtactctagca 29
              ||||||||||||||||||||||
Sbjct: 122118 tcccactactagtactctagca 122139
to top
>gb|AC153727.6| Mus musculus BAC clone RP23-354L15 from chromosome 12, complete
            sequence
          Length = 202733

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 42   cctccctccccctccacttcc 62
            |||||||||||||||||||||
Sbjct: 5849 cctccctccccctccacttcc 5829
to top
>gb|AC166973.5| Mus musculus chromosome 1, clone RP24-372J6, complete sequence
          Length = 146400

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 38     tctccctccctccccctccacttcc 62
              ||||||||||||||||||| |||||
Sbjct: 133198 tctccctccctccccctccccttcc 133222
to top
>gb|AC111023.12| Mus musculus chromosome 19, clone RP23-221A9, complete sequence
          Length = 228107

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 38     tctccctccctccccctccacttcc 62
              ||||||||||||||||||| |||||
Sbjct: 213769 tctccctccctccccctccccttcc 213745
to top
>gb|AC131915.7| Mus musculus chromosome 5, clone RP24-491C20, complete sequence
          Length = 154195

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 38    tctccctccctccccctccacttcc 62
             |||||||||||||||||| ||||||
Sbjct: 19749 tctccctccctccccctctacttcc 19773
to top
>gb|AC132919.9| Mus musculus chromosome 12, clone RP24-356H3, complete sequence
          Length = 163965

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 42   cctccctccccctccacttcc 62
            |||||||||||||||||||||
Sbjct: 7235 cctccctccccctccacttcc 7215
to top
>ref|XM_986810.1| PREDICTED: Mus musculus neurotrophic tyrosine kinase, receptor,
           type 1, transcript variant 2 (Ntrk1), mRNA
          Length = 1276

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 185 acggttgaggtccccgtggcg 205
           |||||||||||||||||||||
Sbjct: 512 acggttgaggtccccgtggcg 492
to top
>ref|XM_986774.1| PREDICTED: Mus musculus neurotrophic tyrosine kinase, receptor, type
            1, transcript variant 1 (Ntrk1), mRNA
          Length = 2630

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 185  acggttgaggtccccgtggcg 205
            |||||||||||||||||||||
Sbjct: 1824 acggttgaggtccccgtggcg 1804
to top
>ref|XM_986852.1| PREDICTED: Mus musculus neurotrophic tyrosine kinase, receptor, type
            1, transcript variant 3 (Ntrk1), mRNA
          Length = 2570

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 185  acggttgaggtccccgtggcg 205
            |||||||||||||||||||||
Sbjct: 1806 acggttgaggtccccgtggcg 1786
to top
>ref|XM_986890.1| PREDICTED: Mus musculus neurotrophic tyrosine kinase, receptor, type
            1, transcript variant 4 (Ntrk1), mRNA
          Length = 2588

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 185  acggttgaggtccccgtggcg 205
            |||||||||||||||||||||
Sbjct: 1824 acggttgaggtccccgtggcg 1804
to top
>ref|XM_920900.2| PREDICTED: Mus musculus neurotrophic tyrosine kinase, receptor,
           type 1, transcript variant 7 (Ntrk1), mRNA
          Length = 1276

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 185 acggttgaggtccccgtggcg 205
           |||||||||||||||||||||
Sbjct: 512 acggttgaggtccccgtggcg 492
to top
>ref|XM_920892.2| PREDICTED: Mus musculus neurotrophic tyrosine kinase, receptor, type
            1, transcript variant 6 (Ntrk1), mRNA
          Length = 2630

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 185  acggttgaggtccccgtggcg 205
            |||||||||||||||||||||
Sbjct: 1824 acggttgaggtccccgtggcg 1804
to top
>ref|XM_920908.2| PREDICTED: Mus musculus neurotrophic tyrosine kinase, receptor, type
            1, transcript variant 8 (Ntrk1), mRNA
          Length = 2570

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 185  acggttgaggtccccgtggcg 205
            |||||||||||||||||||||
Sbjct: 1806 acggttgaggtccccgtggcg 1786
to top
>ref|XM_908571.2| PREDICTED: Mus musculus neurotrophic tyrosine kinase, receptor, type
            1, transcript variant 5 (Ntrk1), mRNA
          Length = 2588

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 185  acggttgaggtccccgtggcg 205
            |||||||||||||||||||||
Sbjct: 1824 acggttgaggtccccgtggcg 1804
to top
>ref|XM_899800.2| PREDICTED: Mus musculus neurotrophic tyrosine kinase, receptor,
           type 1, transcript variant 3 (Ntrk1), mRNA
          Length = 1276

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 185 acggttgaggtccccgtggcg 205
           |||||||||||||||||||||
Sbjct: 512 acggttgaggtccccgtggcg 492
to top
>ref|XM_899794.2| PREDICTED: Mus musculus neurotrophic tyrosine kinase, receptor, type
            1, transcript variant 2 (Ntrk1), mRNA
          Length = 2630

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 185  acggttgaggtccccgtggcg 205
            |||||||||||||||||||||
Sbjct: 1824 acggttgaggtccccgtggcg 1804
to top
>ref|XM_899803.2| PREDICTED: Mus musculus neurotrophic tyrosine kinase, receptor, type
            1, transcript variant 4 (Ntrk1), mRNA
          Length = 2570

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 185  acggttgaggtccccgtggcg 205
            |||||||||||||||||||||
Sbjct: 1806 acggttgaggtccccgtggcg 1786
to top
>ref|XM_283871.3| PREDICTED: Mus musculus neurotrophic tyrosine kinase, receptor, type
            1, transcript variant 1 (Ntrk1), mRNA
          Length = 2588

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 185  acggttgaggtccccgtggcg 205
            |||||||||||||||||||||
Sbjct: 1824 acggttgaggtccccgtggcg 1804
to top
>gb|AC122439.4| Mus musculus BAC clone RP24-222B4 from chromosome 3, complete sequence
          Length = 159703

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 185   acggttgaggtccccgtggcg 205
             |||||||||||||||||||||
Sbjct: 78729 acggttgaggtccccgtggcg 78709
to top
>gb|AC125410.4| Mus musculus BAC clone RP23-146N3 from 3, complete sequence
          Length = 213701

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 38     tctccctccctccccctccacttcc 62
              ||||||||||||||||||| |||||
Sbjct: 203437 tctccctccctccccctccccttcc 203413
to top
>gb|AC125408.3| Mus musculus BAC clone RP23-94M23 from 3, complete sequence
          Length = 210519

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 38     tctccctccctccccctccacttcc 62
              ||||||||||||||||||| |||||
Sbjct: 173707 tctccctccctccccctccccttcc 173731
to top
>emb|CR718225.2|CNS0GH4N Tetraodon nigroviridis full-length cDNA
          Length = 806

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 45  ccctccccctccacttccacg 65
           |||||||||||||||||||||
Sbjct: 215 ccctccccctccacttccacg 235
to top
>gb|AC007008.3| Homo sapiens BAC clone RP11-554O7 from 7, complete sequence
          Length = 699

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 141 ctctccctctcctctgctccaccac 165
           ||||||||| |||||||||||||||
Sbjct: 616 ctctccctcccctctgctccaccac 592
to top
>gb|AC158131.4| Mus musculus chromosome 19, clone RP24-398D6, complete sequence
          Length = 82175

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 38    tctccctccctccccctccacttcc 62
             ||||||||||||||||||| |||||
Sbjct: 35484 tctccctccctccccctccccttcc 35508
to top
>emb|BX883042.1| Rattus norvegicus chromosome 20, major histocompatibility complex,
              assembled from 40 BACs, strain Brown Norway (BN/ssNHsd),
              RT1n haplotype; segment 1/11
          Length = 348780

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 36     cgtctccctccctccccctcc 56
              |||||||||||||||||||||
Sbjct: 230870 cgtctccctccctccccctcc 230850
to top
>gb|AC164558.2| Mus musculus BAC clone RP23-238F5 from chromosome 16, complete sequence
          Length = 186421

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 40    tccctccctccccctccactt 60
             |||||||||||||||||||||
Sbjct: 73900 tccctccctccccctccactt 73920
to top
>gb|AC158143.6| Mus musculus chromosome 5, clone RP23-409I5, complete sequence
          Length = 191873

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 38   tctccctccctccccctccacttcc 62
            |||||||||||||||||| ||||||
Sbjct: 5853 tctccctccctccccctctacttcc 5829
to top
>dbj|AK148691.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN
           full-length enriched library, clone:7120435O20
           product:neurotrophic tyrosine kinase, receptor, type 1,
           full insert sequence
          Length = 1493

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 185 acggttgaggtccccgtggcg 205
           |||||||||||||||||||||
Sbjct: 733 acggttgaggtccccgtggcg 713
to top
>gb|AF312225.1|AF312225 Homo sapiens chromosome 2 map 2q37.1, complete sequence
          Length = 345102

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 40     tccctccctccccctccactt 60
              |||||||||||||||||||||
Sbjct: 203243 tccctccctccccctccactt 203223
to top
>gb|AC155824.3| Mus musculus BAC clone RP23-136L1 from chromosome 8, complete sequence
          Length = 220437

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 287    ggagacattgaacatgtggat 307
              |||||||||||||||||||||
Sbjct: 155311 ggagacattgaacatgtggat 155291
to top
>gb|AC161454.3| Mus musculus BAC clone RP23-332F10 from chromosome 3, complete sequence
          Length = 228486

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 185   acggttgaggtccccgtggcg 205
             |||||||||||||||||||||
Sbjct: 94348 acggttgaggtccccgtggcg 94328
to top
>gb|AC006329.5| Homo sapiens BAC clone RP11-132A1 from 7, complete sequence
          Length = 145253

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 141 ctctccctctcctctgctccaccac 165
           ||||||||| |||||||||||||||
Sbjct: 117 ctctccctcccctctgctccaccac 93
to top
>dbj|AK081588.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130047N21 product:neurotrophic tyrosine
            kinase, receptor, type 1, full insert sequence
          Length = 2592

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 185  acggttgaggtccccgtggcg 205
            |||||||||||||||||||||
Sbjct: 1827 acggttgaggtccccgtggcg 1807
to top
>gb|AC155242.2| Mus musculus BAC clone RP24-496G24 from chromosome 17, complete
             sequence
          Length = 132408

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 38    tctccctccctccccctccacttcc 62
             ||||||||||||||||||| |||||
Sbjct: 13632 tctccctccctccccctccccttcc 13608
to top
>gb|BC051596.1| Mus musculus neurotrophic tyrosine kinase, receptor, type 1, mRNA
           (cDNA clone IMAGE:5256438)
          Length = 960

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 185 acggttgaggtccccgtggcg 205
           |||||||||||||||||||||
Sbjct: 518 acggttgaggtccccgtggcg 498
to top
>gb|AC138658.1| Homo sapiens BAC clone RP11-95H14 from 2, complete sequence
          Length = 72643

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 40    tccctccctccccctccactt 60
             |||||||||||||||||||||
Sbjct: 71641 tccctccctccccctccactt 71621
to top
>gb|AC093374.4| Homo sapiens BAC clone RP13-650L7 from 2, complete sequence
          Length = 106695

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 40  tccctccctccccctccactt 60
           |||||||||||||||||||||
Sbjct: 998 tccctccctccccctccactt 978
to top
>gb|AC116118.16| Mus musculus chromosome 16, clone RP23-73P19, complete sequence
          Length = 128851

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 40    tccctccctccccctccactt 60
             |||||||||||||||||||||
Sbjct: 42141 tccctccctccccctccactt 42121
to top
>emb|CT010490.10| Mouse DNA sequence from clone RP23-148P12 on chromosome 16, complete
              sequence
          Length = 206348

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 40     tccctccctccccctccactt 60
              |||||||||||||||||||||
Sbjct: 119421 tccctccctccccctccactt 119401
to top
>gb|AC132587.5| Mus musculus BAC clone RP24-372N16 from 12, complete sequence
          Length = 181443

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 42    cctccctccccctccacttcc 62
             |||||||||||||||||||||
Sbjct: 56275 cctccctccccctccacttcc 56295
to top
>gb|AC140224.4| Mus musculus BAC clone RP24-483E8 from 1, complete sequence
          Length = 175026

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 38    tctccctccctccccctccacttcc 62
             ||||||||||||||||||| |||||
Sbjct: 11369 tctccctccctccccctccccttcc 11393
to top
>gb|AC140457.3| Mus musculus BAC clone RP23-15F7 from 12, complete sequence
          Length = 215722

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 42    cctccctccccctccacttcc 62
             |||||||||||||||||||||
Sbjct: 19080 cctccctccccctccacttcc 19100
to top
>gb|AC125067.4| Mus musculus BAC clone RP23-431C5 from 12, complete sequence
          Length = 192938

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 42   cctccctccccctccacttcc 62
            |||||||||||||||||||||
Sbjct: 5676 cctccctccccctccacttcc 5656
to top
>emb|AL662895.7| Mouse DNA sequence from clone RP23-340L19 on chromosome 11, complete
             sequence
          Length = 214811

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 38    tctccctccctccccctccac 58
             |||||||||||||||||||||
Sbjct: 96506 tctccctccctccccctccac 96486
to top
>emb|AL645947.9| Mouse DNA sequence from clone RP23-338K8 on chromosome 11, complete
              sequence
          Length = 235868

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 39     ctccctccctccccctccact 59
              |||||||||||||||||||||
Sbjct: 123924 ctccctccctccccctccact 123904
to top
>gb|AC105163.12| Mus musculus chromosome 3, clone RP24-163F11, complete sequence
          Length = 167766

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 39     ctccctccctccccctccacttcc 62
              ||||||||||||| ||||||||||
Sbjct: 142458 ctccctccctccctctccacttcc 142481
to top
>gb|AC118708.4| Mus musculus chromosome 7, clone RP24-118K11, complete sequence
          Length = 212638

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   tcacaaatgtttcccttagt 247
             ||||||||||||||||||||
Sbjct: 87772 tcacaaatgtttcccttagt 87791
to top
>ref|XM_506161.1| PREDICTED Oryza sativa (japonica cultivar-group), P0022E03.2 mRNA
          Length = 3539

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 37  gtctccctccctccccctcc 56
           ||||||||||||||||||||
Sbjct: 353 gtctccctccctccccctcc 372
to top
>gb|AC147651.4| Homo sapiens BAC clone RP13-689E11 from 7, complete sequence
          Length = 162139

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    cgtctccctccctccccctc 55
             ||||||||||||||||||||
Sbjct: 41541 cgtctccctccctccccctc 41560
to top
>gb|AY453411.1| Usutu virus strain Vienna 2001 from Austria, complete genome
          Length = 11066

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 137  cctactctccctctcctctg 156
            ||||||||||||||||||||
Sbjct: 5993 cctactctccctctcctctg 5974
to top
>gb|AC106595.9| Rattus norvegicus 7 BAC CH230-237N20 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 214961

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 39    ctccctccctccccctccacttcc 62
             |||||||||||||||||| |||||
Sbjct: 11670 ctccctccctccccctccccttcc 11647
to top
>gb|AC147375.3| Mus musculus BAC clone RP24-159O13 from chromosome 12, complete
             sequence
          Length = 176510

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    tctccctccctccccctcca 57
             ||||||||||||||||||||
Sbjct: 46588 tctccctccctccccctcca 46607
to top
>gb|AC140478.2| Mus musculus BAC clone RP24-149A3 from chromosome 6, complete sequence
          Length = 162440

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 39     ctccctccctccccctccac 58
              ||||||||||||||||||||
Sbjct: 124772 ctccctccctccccctccac 124791
to top
>gb|AC140267.2| Mus musculus BAC clone RP24-303O5 from chromosome 15, complete sequence
          Length = 169842

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 272   ttcttttctttttcaggaga 291
             ||||||||||||||||||||
Sbjct: 32960 ttcttttctttttcaggaga 32979
to top
>gb|AC140286.3| Mus musculus BAC clone RP24-573E14 from chromosome 5, complete
           sequence
          Length = 164620

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 38  tctccctccctccccctcca 57
           ||||||||||||||||||||
Sbjct: 133 tctccctccctccccctcca 114
to top
>gb|BT013318.1| Lycopersicon esculentum clone 135005F, mRNA sequence
          Length = 1197

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                               
Query: 266 aaggaattcttttctttttcaggagacattgaacatgtggatatgaaaagtg 317
           ||||||||||||||||| || || || |||||| |||| || ||| ||||||
Sbjct: 264 aaggaattcttttctttctctggtgatattgaatatgttgagatgcaaagtg 315
to top
>gb|AC164304.2| Mus musculus BAC clone RP23-261B24 from chromosome 14, complete sequence
          Length = 184690

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     gtctccctccctccccctcc 56
              ||||||||||||||||||||
Sbjct: 135668 gtctccctccctccccctcc 135687
to top
>gb|AC164316.3| Mus musculus BAC clone RP23-16B4 from chromosome 6, complete sequence
          Length = 222892

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 39   ctccctccctccccctccacttcc 62
            |||||||||||||||||| |||||
Sbjct: 5240 ctccctccctccccctccccttcc 5263
to top
>gb|AY330343.1| Odocoileus hemionus prion protein (prnp) gene, complete cds
          Length = 65476

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 230 acaaatgtttcccttagtgc 249
           ||||||||||||||||||||
Sbjct: 501 acaaatgtttcccttagtgc 520
to top
>gb|AC135670.3| Mus musculus BAC clone RP23-370D21 from chromosome 19, complete sequence
          Length = 182582

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 38     tctccctccctccccctccacttc 61
              ||||||||||||||||||| ||||
Sbjct: 140441 tctccctccctccccctccccttc 140418
to top
>gb|AC133077.4| Mus musculus BAC clone RP24-423E10 from chromosome 12, complete
             sequence
          Length = 183317

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    tctccctccctccccctcca 57
             ||||||||||||||||||||
Sbjct: 95210 tctccctccctccccctcca 95229
to top
>emb|CT010524.6| Mouse DNA sequence from clone RP23-341L7 on chromosome 16, complete
             sequence
          Length = 233599

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 39    ctccctccctccccctccacttcc 62
             |||||||||||||||||| |||||
Sbjct: 33210 ctccctccctccccctcctcttcc 33233
to top
>emb|AJ567108.1|GHI567108 Gossypium hirsutum microsatellite DNA mGhCIR161, clone CIR161
          Length = 454

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 264 ttaaggaattcttttctttt 283
           ||||||||||||||||||||
Sbjct: 128 ttaaggaattcttttctttt 147
to top
>gb|AC131744.3| Mus musculus BAC clone RP23-50E10 from chromosome 3, complete sequence
          Length = 225416

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 39     ctccctccctccccctccacttcc 62
              ||||||||||||| ||||||||||
Sbjct: 187850 ctccctccctccctctccacttcc 187827
to top
>gb|AC026261.8| Homo sapiens chromosome 8, clone RP11-610E3, complete sequence
          Length = 193670

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 276    tttctttttcaggagacatt 295
              ||||||||||||||||||||
Sbjct: 177257 tttctttttcaggagacatt 177276
to top
>emb|CR956354.1| Wallaby DNA sequence from clone GRWB-143H14, complete sequence
          Length = 120769

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    ctccctccctccccctccac 58
             ||||||||||||||||||||
Sbjct: 10265 ctccctccctccccctccac 10246
to top
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 199    cgtggcggcgccggtgagga 218
              ||||||||||||||||||||
Sbjct: 389775 cgtggcggcgccggtgagga 389756
to top
>emb|AL136380.22| Human DNA sequence from clone RP5-882O7 on chromosome 1p33-34.2
             Contains the 5' end of the PTCH2 gene for patched homolog
             2 (Drosophila), a ribosomal protein S2 (RPS2) pseudogene,
             the EIF2B3 gene for eukaryotic translation initiation
             factor 2B subunit 3 gamma 58kDa, a chromosome 14 open
             reading frame 18 (C14orf18) pseudogene, a peptidylprolyl
             isomerase A (cyclophilin A) (PPIA) pseudogene, a
             mitochondrial ribosomal protein S17 (MRPS17) pseudogene
             and four CpG islands, complete sequence
          Length = 171656

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 225   aggtcacaaatgtttccctt 244
             ||||||||||||||||||||
Sbjct: 40326 aggtcacaaatgtttccctt 40345
to top
>emb|AL121584.24|HSBA388K2 Human DNA sequence from clone RP11-388K2 on chromosome 20 Contains part
             of the gene for a novel protein (LOC284776) and a putative
             novel gene, complete sequence
          Length = 145415

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    tctccctccctccccctcca 57
             ||||||||||||||||||||
Sbjct: 14463 tctccctccctccccctcca 14482
to top
>gb|AC026761.17| Mus musculus Strain 129S6/SvEvTac chromosome 19 BAC, RP22-325J22,
             Complete Sequence, complete sequence
          Length = 163475

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 38    tctccctccctccccctccacttc 61
             ||||||||||||||||||| ||||
Sbjct: 78042 tctccctccctccccctccccttc 78065
to top
>gb|AC163347.4| Mus musculus BAC clone RP23-259F13 from chromosome 18, complete
             sequence
          Length = 184836

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 39    ctccctccctccccctccacttcc 62
             |||||||||||||||||| |||||
Sbjct: 37073 ctccctccctccccctccccttcc 37050
to top
>gb|AC164168.3| Mus musculus 6 BAC RP23-343D21 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 236103

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 39    ctccctccctccccctccacttcc 62
             |||||||||||||||||| |||||
Sbjct: 41243 ctccctccctccccctccccttcc 41266
to top
>gb|AC161890.4| Mus musculus 6 BAC RP23-356P12 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 243990

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 39     ctccctccctccccctccac 58
              ||||||||||||||||||||
Sbjct: 103722 ctccctccctccccctccac 103741
to top
>emb|AL645943.19| Mouse DNA sequence from clone RP23-130E22 on chromosome 11 Contains a
             prohibitin (Phb) pseudogene and a novel gene, complete
             sequence
          Length = 213383

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 39    ctccctccctccccctccacttcc 62
             |||||||||||||||||| |||||
Sbjct: 35094 ctccctccctccccctccccttcc 35117
to top
>gb|AC021621.9| Homo sapiens chromosome 8, clone RP11-356M23, complete sequence
          Length = 186114

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 276    tttctttttcaggagacatt 295
              ||||||||||||||||||||
Sbjct: 106519 tttctttttcaggagacatt 106500
to top
>gb|AC154642.2| Mus musculus BAC clone RP23-277C14 from chromosome 14, complete
             sequence
          Length = 211315

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   ttaaggaattcttttctttt 283
             ||||||||||||||||||||
Sbjct: 44894 ttaaggaattcttttctttt 44913
to top
>gb|AC161880.5| Mus musculus BAC clone RP23-261N13 from chromosome 18, complete sequence
          Length = 204676

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 39     ctccctccctccccctccacttcc 62
              |||||||||||||||||| |||||
Sbjct: 181408 ctccctccctccccctccccttcc 181385
to top
>gb|AC155313.2| Mus musculus BAC clone RP23-349D10 from chromosome 15, complete sequence
          Length = 213367

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 272    ttcttttctttttcaggaga 291
              ||||||||||||||||||||
Sbjct: 172072 ttcttttctttttcaggaga 172091
to top
>gb|AC010616.5|AC010616 Homo sapiens chromosome 19 clone CTD-2575K13, complete sequence
          Length = 171849

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    tctccctccctccccctcca 57
             ||||||||||||||||||||
Sbjct: 76255 tctccctccctccccctcca 76274
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 37      gtctccctccctccccctcc 56
               ||||||||||||||||||||
Sbjct: 2493791 gtctccctccctccccctcc 2493772
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 200      gtggcggcgccggtgaggag 219
                ||||||||||||||||||||
Sbjct: 40017737 gtggcggcgccggtgaggag 40017756
to top
>gb|AC021301.6|AC021301 Homo sapiens chromosome 8, clone RP11-411P7, complete sequence
          Length = 140765

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 276   tttctttttcaggagacatt 295
             ||||||||||||||||||||
Sbjct: 95816 tttctttttcaggagacatt 95797
to top
>gb|AC155659.6| Mus musculus 6 BAC RP24-68F17 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 195440

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 39     ctccctccctccccctccacttcc 62
              |||||||||||||||||| |||||
Sbjct: 154130 ctccctccctccccctccccttcc 154153
to top
>dbj|AP003451.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0413C03
          Length = 162161

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 200    gtggcggcgccggtgaggag 219
              ||||||||||||||||||||
Sbjct: 109188 gtggcggcgccggtgaggag 109207
to top
>ref|XM_580014.1| PREDICTED: Rattus norvegicus LOC499775 (LOC499775), mRNA
          Length = 2882

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 139  tactctccctctcctctgct 158
            ||||||||||||||||||||
Sbjct: 1547 tactctccctctcctctgct 1528
to top
>gb|AC007240.2| Homo sapiens BAC clone RP11-83M8 from 2, complete sequence
          Length = 203250

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 33    agtcgtctccctccctccccctcc 56
             ||||||||||||||||| ||||||
Sbjct: 93111 agtcgtctccctccctcaccctcc 93088
to top
>gb|AC068947.17| Mus Musculus Strain C57BL6/J Chromosome 3 BAC, RP23-108E10, complete
             sequence
          Length = 211512

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 39    ctccctccctccccctccacttcc 62
             |||||||||||||||||| |||||
Sbjct: 96913 ctccctccctccccctccccttcc 96890
to top
>dbj|AP004263.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0022E03
          Length = 163032

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    gtctccctccctccccctcc 56
             ||||||||||||||||||||
Sbjct: 58771 gtctccctccctccccctcc 58752
to top
>emb|AL928584.23| Mouse DNA sequence from clone RP23-251I16 on chromosome 4, complete
             sequence
          Length = 118310

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 39    ctccctccctccccctccacttcc 62
             |||||||||||||||||| |||||
Sbjct: 86744 ctccctccctccccctcctcttcc 86721
to top
>dbj|BS000196.1| Pan troglodytes chromosome 22 clone:RP43-025M10, map 22, complete
              sequences
          Length = 196989

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 295    tgaacatgtggatatgaaaa 314
              ||||||||||||||||||||
Sbjct: 152411 tgaacatgtggatatgaaaa 152392
to top
>dbj|AK102834.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109J23, full
           insert sequence
          Length = 3540

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 37  gtctccctccctccccctcc 56
           ||||||||||||||||||||
Sbjct: 353 gtctccctccctccccctcc 372
to top
>gb|AC154591.2| Mus musculus BAC clone RP23-370M19 from 16, complete sequence
          Length = 196385

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 39    ctccctccctccccctccacttcc 62
             |||||||||||||||||| |||||
Sbjct: 85635 ctccctccctccccctcctcttcc 85612
to top
>emb|AJ238420.1|HSA238420 Homo sapiens PDGFA gene for platelet-derived growth factor A chain,
            exons 1 to 4
          Length = 8005

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 36   cgtctccctccctccccctc 55
            ||||||||||||||||||||
Sbjct: 6002 cgtctccctccctccccctc 5983
to top
>gb|AC120412.12| Mus musculus chromosome 5, clone RP24-447P14, complete sequence
          Length = 149454

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    tctccctccctccccctcca 57
             ||||||||||||||||||||
Sbjct: 18123 tctccctccctccccctcca 18104
to top
>gb|BC109246.1| Homo sapiens cDNA clone MGC:129780 IMAGE:40019131, complete cds
          Length = 1792

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 36  cgtctccctccctccccctc 55
           ||||||||||||||||||||
Sbjct: 534 cgtctccctccctccccctc 515
to top
>gb|AC122513.5| Mus musculus BAC clone RP24-455A5 from 3, complete sequence
          Length = 164485

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 39    ctccctccctccccctccacttcc 62
             |||||||||||||||||| |||||
Sbjct: 70038 ctccctccctccccctccccttcc 70061
to top
>gb|AC113480.8| Mus musculus chromosome 13, clone RP23-309D8, complete sequence
          Length = 181457

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   gaattcttttctttttcagg 288
             ||||||||||||||||||||
Sbjct: 88916 gaattcttttctttttcagg 88935
to top
>emb|AL844198.7| Mouse DNA sequence from clone RP23-438P13 on chromosome 4, complete
              sequence
          Length = 176049

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     gtctccctccctccccctcc 56
              ||||||||||||||||||||
Sbjct: 165619 gtctccctccctccccctcc 165638
to top
>gb|AC171502.2| Mus musculus BAC clone RP23-242G4 from chromosome 6, complete sequence
          Length = 209147

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 39     ctccctccctccccctccacttcc 62
              |||||||||||||||||| |||||
Sbjct: 148335 ctccctccctccccctccccttcc 148358
to top
>emb|AL626765.22| Mouse DNA sequence from clone RP23-179N14 on chromosome 19, complete
             sequence
          Length = 206196

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    tctccctccctccccctcca 57
             ||||||||||||||||||||
Sbjct: 62201 tctccctccctccccctcca 62220



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    tctccctccctccccctcca 57
             ||||||||||||||||||||
Sbjct: 62173 tctccctccctccccctcca 62192
to top
>emb|AL772296.6| Mouse DNA sequence from clone RP23-66O9 on chromosome 4, complete
             sequence
          Length = 191662

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    gtctccctccctccccctcc 56
             ||||||||||||||||||||
Sbjct: 12939 gtctccctccctccccctcc 12958


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,756,090
Number of Sequences: 3902068
Number of extensions: 4756090
Number of successful extensions: 172235
Number of sequences better than 10.0: 121
Number of HSP's better than 10.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 171559
Number of HSP's gapped (non-prelim): 676
length of query: 358
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 336
effective length of database: 17,147,199,772
effective search space: 5761459123392
effective search space used: 5761459123392
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top