Clone Information

BLAST Search Result

Clone Name	bast48h05
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	TOLB_ANAMM (Q5PBH8) Protein tolB precursor	36	0.026
2	TOLB_COXBU (Q83F59) Protein tolB precursor	34	0.100
3	TOLB_MYXXA (Q84FF7) Protein tolB precursor (Adventurous gliding ...	33	0.17
4	TOLB_BDEBA (Q6MRB2) Protein tolB precursor	33	0.17
5	TOLB_XANOR (Q5H299) Protein tolB precursor	33	0.17
6	TOLB_XANCP (Q8P6F2) Protein tolB precursor	33	0.17
7	TOLB_XANAC (Q8PHV7) Protein tolB precursor	33	0.17
8	FA8A1_HUMAN (Q9UBU6) Protein FAM8A1 (Autosomal highly conserved ...	32	0.29
9	TOLB_SHEON (Q8EDJ8) Protein tolB precursor	32	0.50
10	TOLB_ZYMMO (Q5NR65) Protein tolB precursor	31	0.65
11	TOLB_CAUCR (Q9A3H4) Protein tolB precursor	31	0.84
12	TOLB_GLUOX (Q5FQB9) Protein tolB precursor	30	1.1
13	TOLB_HAEDU (Q7VKU3) Protein tolB precursor	30	1.1
14	TOLB_RICTY (Q68X69) Protein tolB precursor	30	1.4
15	TOLB_NITEU (Q82XN9) Protein tolB precursor	30	1.4
16	TOLB_GEOSL (Q74H67) Protein tolB precursor	30	1.4
17	TOLB_VIBVU (Q8DAM3) Protein tolB precursor	30	1.9
18	TOLB_RICPR (Q9ZDM5) Protein tolB precursor	30	1.9
19	TOLB_MANSM (Q65UN0) Protein tolB precursor	30	1.9
20	TOLB_PASMU (Q9CM71) Protein tolB precursor	30	1.9
21	TOLB_PHOPR (Q6LP47) Protein tolB precursor	30	1.9
22	DPOL_HBVDR (P03157) P protein [Includes: DNA-directed DNA polyme...	29	3.2
23	PURA_GEOSL (Q747F9) Adenylosuccinate synthetase (EC 6.3.4.4) (IM...	29	3.2
24	GTI1_SCHPO (O14367) Gluconate transport inducer 1	29	3.2
25	TOLB_RICCN (Q92IL4) Protein tolB precursor	29	3.2
26	TOLB_AGRT5 (Q8U9L4) Protein tolB precursor	29	3.2
27	TRI45_MOUSE (Q6PFY8) Tripartite motif protein 45	28	4.2
28	TOLB_WIGBR (Q8D2E2) Protein tolB precursor	28	5.5
29	POLG_HCVJ6 (P26660) Genome polyprotein [Contains: Core protein p...	28	5.5
30	POLG_HCVJK (Q68801) Genome polyprotein [Contains: Core protein p...	28	5.5
31	COPA_HUMAN (P53621) Coatomer subunit alpha (Alpha-coat protein) ...	28	5.5
32	COPA_BOVIN (Q27954) Coatomer subunit alpha (Alpha-coat protein) ...	28	5.5
33	TOLB_VIBVY (Q7MJ87) Protein tolB precursor	28	5.5
34	SIM2_HUMAN (Q14190) Single-minded homolog 2	28	5.5
35	TOLB_FRATT (Q5NGJ7) Protein tolB precursor	28	5.5
36	CAC1E_RABIT (Q02343) Voltage-dependent R-type calcium channel al...	28	5.5
37	TRUC_VIBPA (Q87MD4) tRNA pseudouridine synthase C (EC 5.4.99.-) ...	28	5.5
38	TOLB_RHOPA (Q6NAR1) Protein tolB precursor	28	5.5
39	NQO5_THET8 (Q56219) NADH-quinone oxidoreductase subunit 5 (EC 1....	28	7.2
40	ETV5_HUMAN (P41161) ETS translocation variant 5 (Ets-related pro...	28	7.2
41	MYOB_TOXGO (O00936) Myosin B/C (MyoB/C) (TgM-B)	28	7.2
42	CABP1_RAT (O88751) Calcium-binding protein 1 (CaBP1) (Caldendrin)	28	7.2
43	TR11B_MOUSE (O08712) Tumor necrosis factor receptor superfamily ...	28	7.2
44	TOLB_YERPS (Q66D90) Protein tolB precursor	28	7.2
45	TOLB_YERPE (Q8ZGZ1) Protein tolB precursor	28	7.2
46	CHLL_ANASP (Q8YM62) Light-independent protochlorophyllide reduct...	28	7.2
47	CT026_HUMAN (Q8NHU2) Protein C20orf26	28	7.2
48	PPME1_GIBZE (Q4IQC1) Protein phosphatase methylesterase 1 (EC 3....	28	7.2
49	POLG_HCVJF (Q99IB8) Genome polyprotein [Contains: Core protein p...	27	9.3
50	DPOL_HBVWJ (P17394) P protein [Includes: DNA-directed DNA polyme...	27	9.3
51	DPOL_HBVWI (P17393) P protein [Includes: DNA-directed DNA polyme...	27	9.3
52	TOLB_VIBCH (Q9KR11) Protein tolB precursor	27	9.3
53	TOLB_RHIME (Q926C2) Protein tolB precursor	27	9.3
54	VG28_ICHV1 (Q00131) Hypothetical gene 28 protein	27	9.3
55	NOTC3_HUMAN (Q9UM47) Neurogenic locus notch homolog protein 3 pr...	27	9.3
56	POLG_HCVNZ (Q81258) Genome polyprotein [Contains: Core protein p...	27	9.3
57	PKN3_MYXXA (Q9XBQ0) Serine/threonine-protein kinase pkn3 (EC 2.7...	27	9.3

>TOLB_ANAMM (Q5PBH8) Protein tolB precursor|
          Length = 441

 Score = 35.8 bits (81), Expect = 0.026
 Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   IELFDLETEQFTAVTSLLNPELHHYNPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRS 181
           + L DLET   TA+  +      + +P FSP G     H       QG + I  +     
Sbjct: 230 VVLHDLETGYSTALGGVRGV---NSSPRFSPDGR----HVLLSESAQGSTNIYSIDLKSG 282

Query: 182 PVSSIRMLRVHGSFPSFSPDAKHFALNGDFFKSPGVTILRADG-SKRWVLAKQPNLFYTS 358
             + +   R   +  S+SPD K    N D    P + ++ ADG ++R + + +      +
Sbjct: 283 KSTRLTNDRSINTSASYSPDKKSIVFNSDRSGRPQLYVMNADGTNQRRISSGKGGYSAPA 342

Query: 359 WSP 367
           WSP
Sbjct: 343 WSP 345



 Score = 28.5 bits (62), Expect = 4.2
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = +2

Query: 218 SFPSFSPDAKHFALNGDFFKSPGVTILRADGSKRWVLAKQPNLFYTSWSP 367
           S P++SP     A      KS  V +++ DGS   +LAK   +   SWSP
Sbjct: 339 SAPAWSPRGDWIAFTKTEGKSFHVGVMKPDGSGERLLAKGYMVDSPSWSP 388

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>TOLB_COXBU (Q83F59) Protein tolB precursor|
          Length = 437

 Score = 33.9 bits (76), Expect = 0.100
 Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 8/114 (7%)
 Frame = +2

Query: 50  LLNPELHHYNPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSIRMLRVHG--SF 223
           LL  ++   +P +SP G ++ Y  F     +G     YLQ + +     R+    G    
Sbjct: 200 LLVSDMPIMSPTWSPDGNKIAYVSF-----EGHRAAIYLQDLATGRRQ-RLSEAPGINGA 253

Query: 224 PSFSPDAKHFALNGDFFKSPGVTILR-ADG-----SKRWVLAKQPNLFYTSWSP 367
           P+FSPD K  AL      +P + IL  ADG     +K W +  +P     +WSP
Sbjct: 254 PAFSPDGKQLALVLTKTGNPKIYILNLADGHLREITKGWSIDTEP-----AWSP 302

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>TOLB_MYXXA (Q84FF7) Protein tolB precursor (Adventurous gliding motility|
           protein W)
          Length = 431

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 31/99 (31%), Positives = 40/99 (40%), Gaps = 5/99 (5%)
 Frame = +2

Query: 86  FSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSIRMLRVH----GSFPSFSPDAKHF 253
           FSP G R+ Y    G   Q       +    +  S  R L        + P++SPD K  
Sbjct: 246 FSPDGKRIAYSLAEGESAQ-------VYVANADGSGARALTDTPYGLNTSPTWSPDGKRI 298

Query: 254 ALNGDFFKSPGVTILRADGSKRWVLAKQPNLFYT-SWSP 367
           A   +   SP V I+ ADG+    L  Q N   T  WSP
Sbjct: 299 AFVSNRGGSPQVYIMNADGTGVRRLTFQGNYNQTPDWSP 337



 Score = 27.7 bits (60), Expect = 7.2
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = +2

Query: 227 SFSPDAKHFALNGDFFKSPGVTILRADGSKRWVLAKQPNLFYTS--WSP 367
           +FSPD K  A +    +S  V +  ADGS    L   P    TS  WSP
Sbjct: 245 AFSPDGKRIAYSLAEGESAQVYVANADGSGARALTDTPYGLNTSPTWSP 293

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>TOLB_BDEBA (Q6MRB2) Protein tolB precursor|
          Length = 461

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
 Frame = +2

Query: 143 GDSMIPYLQPVRSPVSSIRMLRVHGSFPSFSPDAKHFALNGDFFKSPGVTILRADGSK-- 316
           G  MI       + V  I    V  S PS+SPD K  A  G    +  + ++ ADG+   
Sbjct: 333 GRPMIYTADAAGNNVKRITFAGVFNSSPSWSPDGKKIAFAGQSDNNFDIFVMNADGTGMI 392

Query: 317 RWVLAKQPN 343
           R   AK+PN
Sbjct: 393 RLTSAKKPN 401

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>TOLB_XANOR (Q5H299) Protein tolB precursor|
          Length = 439

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
 Frame = +2

Query: 77  NPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPV----RSPVSSIRMLRVHGSFPSFSPDA 244
           +P +SP G +L Y  F     +G+S I YLQ +    R  VSS R   ++G+ PSFSPD 
Sbjct: 208 SPNWSPDGKKLAYVSFE----RGNSSI-YLQDIATGARELVSSFR--GINGA-PSFSPDG 259

Query: 245 KHFAL 259
           +  AL
Sbjct: 260 RRLAL 264

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>TOLB_XANCP (Q8P6F2) Protein tolB precursor|
          Length = 439

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
 Frame = +2

Query: 77  NPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPV----RSPVSSIRMLRVHGSFPSFSPDA 244
           +P +SP G +L Y  F     +G+S I YLQ +    R  VSS R   ++G+ PSFSPD 
Sbjct: 208 SPNWSPDGKKLAYVSFE----RGNSSI-YLQDIASGARELVSSFR--GINGA-PSFSPDG 259

Query: 245 KHFAL 259
           +  AL
Sbjct: 260 RRLAL 264

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>TOLB_XANAC (Q8PHV7) Protein tolB precursor|
          Length = 439

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
 Frame = +2

Query: 77  NPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPV----RSPVSSIRMLRVHGSFPSFSPDA 244
           +P +SP G +L Y  F     +G+S I YLQ +    R  VSS R   ++G+ PSFSPD 
Sbjct: 208 SPNWSPDGKKLAYVSFE----RGNSSI-YLQDIATGARELVSSFR--GINGA-PSFSPDG 259

Query: 245 KHFAL 259
           +  AL
Sbjct: 260 RRLAL 264

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>FA8A1_HUMAN (Q9UBU6) Protein FAM8A1 (Autosomal highly conserved protein)|
          Length = 413

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
 Frame = +2

Query: 59  PELHHYNPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQP----VRSPVSSIRMLRVHGSFP 226
           P+L +YNPF+  S G  G      AG+   + +  L P    V++ V +  + RV  + P
Sbjct: 167 PQLGYYNPFYFLSPGAAGPDPRTAAGISTPAPVAGLGPRAPHVQASVRATPVTRVGSAAP 226

Query: 227 SFSP 238
           S SP
Sbjct: 227 SRSP 230

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>TOLB_SHEON (Q8EDJ8) Protein tolB precursor|
          Length = 442

 Score = 31.6 bits (70), Expect = 0.50
 Identities = 24/61 (39%), Positives = 32/61 (52%)
 Frame = +2

Query: 77  NPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSIRMLRVHGSFPSFSPDAKHFA 256
           +P +SP G RL Y  F     +      Y Q VR+ VSS     ++G+ PSFSPD K  A
Sbjct: 216 SPAWSPDGRRLAYVSFENKKAEIFVQDLYTQ-VRTKVSSFS--GINGA-PSFSPDGKSLA 271

Query: 257 L 259
           +
Sbjct: 272 V 272

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>TOLB_ZYMMO (Q5NR65) Protein tolB precursor|
          Length = 458

 Score = 31.2 bits (69), Expect = 0.65
 Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
 Frame = +2

Query: 74  YNPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSIRMLRVHG--SFPSFSPDAK 247
           + P FSP G  + +       V G++ I Y  PV S   + R+    G  + PSFSPD  
Sbjct: 274 FAPRFSPDGKTIVF----SMSVAGNTDI-YKVPV-SGGQATRLTTSPGIDTAPSFSPDGS 327

Query: 248 HFALNGDFFKSPGVTILRADGSKRWVLAKQPNLFYTS-WSP 367
                 D   S  + I+ ADGS +  ++     + T  WSP
Sbjct: 328 KIVFESDRSGSQQIYIMNADGSNQNRISFGSGRYATPVWSP 368

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>TOLB_CAUCR (Q9A3H4) Protein tolB precursor|
          Length = 432

 Score = 30.8 bits (68), Expect = 0.84
 Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
 Frame = +2

Query: 74  YNPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSS-IRMLRVHGSFPSFSPDAKH 250
           + P FSP G ++ +   R     G+S I Y+  +RS  ++ I       + PSFSPD   
Sbjct: 248 FAPRFSPDGSKVAFSVERN----GNSDI-YVMDLRSRATTRITTDPAIDTSPSFSPDGTK 302

Query: 251 FALNGDFFKSPGVTILRADGS 313
              N D      + ++  DGS
Sbjct: 303 IVFNSDRGGQAQIYVMNTDGS 323

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>TOLB_GLUOX (Q5FQB9) Protein tolB precursor|
          Length = 453

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 24/79 (30%), Positives = 32/79 (40%)
 Frame = +2

Query: 74  YNPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSIRMLRVHGSFPSFSPDAKHF 253
           + P FSP+GG +     RG G   D  +  L   R+            + P FSPD    
Sbjct: 262 FAPRFSPTGGSVVLSATRGGG--SDIFVVDLAS-RAKRQITNSNGAIDTSPCFSPDGSQI 318

Query: 254 ALNGDFFKSPGVTILRADG 310
             N D   SP + I+ A G
Sbjct: 319 VFNSDRGGSPQLYIMSASG 337

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>TOLB_HAEDU (Q7VKU3) Protein tolB precursor|
          Length = 426

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 2/99 (2%)
 Frame = +2

Query: 77  NPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSI-RMLRVHGSFPSFSPDAKHF 253
           +P +SP+G +L Y  F     Q       +  +RS   S+   L+ H   P+FSPD    
Sbjct: 204 SPEWSPNGSKLAYVTFENKRPQ-----IVVHDLRSGQRSVVAALKGHNGAPAFSPDGSRL 258

Query: 254 ALNGDFFKSPGVTILRADGSKRWVL-AKQPNLFYTSWSP 367
           A   +      + I   +G     L A   N    SWSP
Sbjct: 259 AFASNQDGELNIYIANINGGTPIKLTANVGNNTEPSWSP 297

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>TOLB_RICTY (Q68X69) Protein tolB precursor|
          Length = 443

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +2

Query: 224 PSFSPDAKHFALNGDFFKSPGVTILRADGSK-RWVLAKQPNLFYTSWSP 367
           PS+SPD K    N D    P + I+ +DGS  R +     +    SWSP
Sbjct: 292 PSYSPDGKKIVYNSDKNGVPQLYIMNSDGSDVRRISFGGGSYASPSWSP 340

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>TOLB_NITEU (Q82XN9) Protein tolB precursor|
          Length = 425

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
 Frame = +2

Query: 77  NPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPV-SSIRMLRVHGSFPSFSPDAKHF 253
           +P +SP G R+ Y  F     +    + Y+Q + +    ++   +   S P++SPD    
Sbjct: 196 SPAWSPDGSRIAYTSF-----EKKKPVVYVQTLATRERKAVANFKGSNSAPAWSPDGSKL 250

Query: 254 ALNGDFFKSPGVTILRADGSKRWVLAKQPNL 346
           A+         + ++ ADGS    +++ P +
Sbjct: 251 AVVLTLHGGSQIYLINADGSGLQRISQSPGI 281

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>TOLB_GEOSL (Q74H67) Protein tolB precursor|
          Length = 432

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
 Frame = +2

Query: 41  VTSLLNPELHHYNPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSIRMLRVHGS 220
           V  L     ++ +P +SP G RL Y R  G G Q       +  + +  +    L   GS
Sbjct: 327 VRRLTTSGAYNVSPRWSPKGDRLVYCRQEG-GFQ-------IYSIATDGTGDTRLTSEGS 378

Query: 221 --FPSFSPDAKHFALNGDFFKSPGVTILRADGS-KRWVLAKQPNLFYTSWSP 367
              P +SPD +    +        + ++R+DGS +  V   +    + +WSP
Sbjct: 379 NEHPRWSPDGRFLTFSSTRDGGEAIYVMRSDGSGQTRVYRSKGKASHPTWSP 430



 Score = 30.0 bits (66), Expect = 1.4
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +2

Query: 224 PSFSPDAKHFALNGDFFKSPGVTILRADGS 313
           P++SPD K  A   D    P V I+ ADGS
Sbjct: 296 PAWSPDGKRIAFVSDRLGKPQVFIMNADGS 325

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>TOLB_VIBVU (Q8DAM3) Protein tolB precursor|
          Length = 443

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 19/61 (31%), Positives = 25/61 (40%)
 Frame = +2

Query: 77  NPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSIRMLRVHGSFPSFSPDAKHFA 256
           +P +SP G RL Y  F+     G + I  L         +     H   P FSPD K  A
Sbjct: 217 SPAWSPDGRRLAYVSFQN----GQAEIFVLNIYTGEHEKLTSFPRHNGAPRFSPDGKKLA 272

Query: 257 L 259
           +
Sbjct: 273 I 273

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>TOLB_RICPR (Q9ZDM5) Protein tolB precursor|
          Length = 443

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +2

Query: 224 PSFSPDAKHFALNGDFFKSPGVTILRADGSKRWVLAKQPNLFYT-SWSP 367
           PS+SPD K    N D    P + I+ +DGS    ++     + + SWSP
Sbjct: 292 PSYSPDGKKIVFNSDKNGVPQLYIMNSDGSDVQRISFGVGSYASPSWSP 340

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>TOLB_MANSM (Q65UN0) Protein tolB precursor|
          Length = 431

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 2/99 (2%)
 Frame = +2

Query: 77  NPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSI-RMLRVHGSFPSFSPDAKHF 253
           +P +SP G RL Y  F     Q       +Q + S    +    + H   P+FSPD    
Sbjct: 209 SPAWSPDGKRLAYVSFENRKSQ-----LVVQDLGSGARKVVASFQGHNGAPAFSPDGSRL 263

Query: 254 ALNGDFFKSPGVTILRADGSKRWVLAK-QPNLFYTSWSP 367
           A   +      + ++ A+G +   L     N    SWSP
Sbjct: 264 AFASNKEGQLNIYVMGANGGQPTQLTSGSGNNTEPSWSP 302

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>TOLB_PASMU (Q9CM71) Protein tolB precursor|
          Length = 432

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 22/81 (27%), Positives = 33/81 (40%)
 Frame = +2

Query: 68  HHYNPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSIRMLRVHGSFPSFSPDAK 247
           H+  P FSP G RL +     +   G   I  +      +S +     + + PS+SPD +
Sbjct: 250 HNGAPAFSPDGSRLAF----ASSKDGVLNIYVMNLGSGQISQLTSGTGNNTEPSWSPDGQ 305

Query: 248 HFALNGDFFKSPGVTILRADG 310
                 D   SP V  + A G
Sbjct: 306 TIVFTSDRSGSPQVYQMSASG 326

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>TOLB_PHOPR (Q6LP47) Protein tolB precursor|
          Length = 449

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 22/61 (36%), Positives = 27/61 (44%)
 Frame = +2

Query: 77  NPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSIRMLRVHGSFPSFSPDAKHFA 256
           +P +SP G +L Y  F     Q   M  Y +  R  V+S      H   P FSPD K  A
Sbjct: 223 SPAWSPDGSKLAYVSFENQQAQIYIMDIY-KGTRELVTSYPR---HNGSPRFSPDGKKLA 278

Query: 257 L 259
           L
Sbjct: 279 L 279

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>DPOL_HBVDR (P03157) P protein [Includes: DNA-directed DNA polymerase (EC|
           2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49);
           Ribonuclease H (EC 3.1.26.4)]
          Length = 843

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 21/60 (35%), Positives = 23/60 (38%)
 Frame = +2

Query: 77  NPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSIRMLRVHGSFPSFSPDAKHFA 256
           NP   PS GRLG +R              L P R       +  V  S PS  PD  HFA
Sbjct: 785 NPADDPSRGRLGLYRPL-----------LLLPFRPTTGRTSLYAVSPSVPSHLPDRVHFA 833

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>PURA_GEOSL (Q747F9) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate|
           ligase) (AdSS) (AMPSase)
          Length = 433

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 6/31 (19%)
 Frame = -1

Query: 211 HTEHAD------GAHRAAHRLQVGDHRVALH 137
           +TEHAD      G + A H L VG+ +V LH
Sbjct: 23  YTEHADDVVRYQGGNNAGHTLVVGEEKVVLH 53

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>GTI1_SCHPO (O14367) Gluconate transport inducer 1|
          Length = 720

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
 Frame = +2

Query: 20  ETEQFTAVTSLLNPELHH--YNPFFSPSGGRLGYHRFRG--------AGVQGDSMIPYLQ 169
           E+E+ + +++L    L    YNPFFS S   +  + F+G        +GV+  S+   + 
Sbjct: 348 ESEKISQLSTLEKRTLPSFPYNPFFSSSTAEIDPYHFQGLTLSTSPISGVESSSLSSAIS 407

Query: 170 PVRSPVSSIRMLRVHGSFPSFSPDA 244
             +S +SS +  +   +  S S +A
Sbjct: 408 RNQSNLSSFQQQQQFSALQSISNNA 432

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>TOLB_RICCN (Q92IL4) Protein tolB precursor|
          Length = 444

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +2

Query: 224 PSFSPDAKHFALNGDFFKSPGVTILRADGS 313
           PS+SPD K    N D    P + I+ +DGS
Sbjct: 293 PSYSPDGKKIVYNSDRNGVPQLYIMNSDGS 322

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>TOLB_AGRT5 (Q8U9L4) Protein tolB precursor|
          Length = 435

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 2/124 (1%)
 Frame = +2

Query: 2   IELFDLETEQFTAVTSLLNPELHHYNPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRS 181
           + L  LET Q   V +        ++P FSP G ++           G++ I Y   +RS
Sbjct: 229 VYLLQLETGQREVVGNFPGMT---FSPRFSPDGQKV----IMSLQQDGNANI-YTMDLRS 280

Query: 182 PVSS-IRMLRVHGSFPSFSPDAKHFALNGDFFKSPGVTILRADGSKRWVLAKQPNLFYTS 358
             ++ +       + PS+SPD +  A   D      + ++ ADGS +  ++     + T 
Sbjct: 281 RTTTRLTNTAAIDTAPSYSPDGQRVAFESDRGGRQQIYVMNADGSGQQRVSFGDGSYSTP 340

Query: 359 -WSP 367
            WSP
Sbjct: 341 VWSP 344

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>TRI45_MOUSE (Q6PFY8) Tripartite motif protein 45|
          Length = 580

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = -3

Query: 212 AHGACGWSSPGCAQAAGRGSSSRPARPH 129
           A  ACG + PG     G G    P RPH
Sbjct: 522 ARCACGGTMPGGYLGCGHGHKGHPGRPH 549

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>TOLB_WIGBR (Q8D2E2) Protein tolB precursor|
          Length = 431

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 16/60 (26%), Positives = 26/60 (43%)
 Frame = +2

Query: 77  NPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSIRMLRVHGSFPSFSPDAKHFA 256
           +P +SP G ++ Y  F     +G S I         +  I     H   P+FSP+ ++ A
Sbjct: 205 SPSWSPDGKKIAYVTFE----KGSSEIKIKDIKTGSIKHISSFPYHNGAPAFSPNGENLA 260

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>POLG_HCVJ6 (P26660) Genome polyprotein [Contains: Core protein p21 (Capsid|
            protein C) (p21); Core protein p19; Envelope glycoprotein
            E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68)
            (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine
            protease/N
          Length = 3032

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 18/46 (39%), Positives = 22/46 (47%)
 Frame = +2

Query: 17   LETEQFTAVTSLLNPELHHYNPFFSPSGGRLGYHRFRGAGVQGDSM 154
            L  E  TA+ SL    L+   P F+  G   GY R R +GV   SM
Sbjct: 2686 LPEEAHTAIHSLTE-RLYVGGPMFNSKGQTCGYRRCRASGVLTTSM 2730

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>POLG_HCVJK (Q68801) Genome polyprotein [Contains: Core protein p21 (Capsid|
            protein C) (p21); Core protein p19; Envelope glycoprotein
            E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68)
            (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine
            protease/N
          Length = 3018

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +2

Query: 14   DLETEQFTAVTSLLNPELHHYNPFFSPSGGRLGYHRFRGAGV 139
            DL+ E    +TSL    L+   P F+  G   GY R R +GV
Sbjct: 2671 DLKDEARRVITSLTE-RLYCGGPMFNSKGQHCGYRRCRASGV 2711

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>COPA_HUMAN (P53621) Coatomer subunit alpha (Alpha-coat protein) (Alpha-COP)|
           (HEPCOP) (HEP-COP) [Contains: Xenin (Xenopsin-related
           peptide); Proxenin]
          Length = 1224

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = +2

Query: 266 DFFKSPGVTILRADGSKRWVLAKQPNL 346
           D  K  GV   R D  + WVLA  PNL
Sbjct: 277 DMSKRTGVQTFRRDHDRFWVLAAHPNL 303

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>COPA_BOVIN (Q27954) Coatomer subunit alpha (Alpha-coat protein) (Alpha-COP)|
           (HEPCOP) (HEP-COP) [Contains: Xenin (Xenopsin-related
           peptide); Proxenin]
          Length = 1224

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = +2

Query: 266 DFFKSPGVTILRADGSKRWVLAKQPNL 346
           D  K  GV   R D  + WVLA  PNL
Sbjct: 277 DMSKRTGVQTFRRDHDRFWVLAAHPNL 303

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>TOLB_VIBVY (Q7MJ87) Protein tolB precursor|
          Length = 449

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 18/61 (29%), Positives = 25/61 (40%)
 Frame = +2

Query: 77  NPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSIRMLRVHGSFPSFSPDAKHFA 256
           +P +SP G +L Y  F+     G + I  L         +     H   P FSPD K  A
Sbjct: 223 SPAWSPDGRQLAYVSFQN----GQAEIFVLNIYTGEHEKLTSFPRHNGAPRFSPDGKKLA 278

Query: 257 L 259
           +
Sbjct: 279 I 279

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>SIM2_HUMAN (Q14190) Single-minded homolog 2|
          Length = 667

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 130 CGRAGRLDDPLPAACAQPGELHPHAPCARLL 222
           CG+ G      PA+ A P EL PH+  + LL
Sbjct: 401 CGQLGNWRASPPASAAAPPELQPHSESSDLL 431

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>TOLB_FRATT (Q5NGJ7) Protein tolB precursor|
          Length = 439

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 19/61 (31%), Positives = 26/61 (42%)
 Frame = +2

Query: 77  NPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSIRMLRVHGSFPSFSPDAKHFA 256
           NP  +PS    G +    +   G   +  L+     V+ I   +   S PSFSPD K  A
Sbjct: 199 NPIATPSWSNDGRYIVYSSYSGGSMGVYTLEIATGKVTRITNYKGINSSPSFSPDGKEIA 258

Query: 257 L 259
           L
Sbjct: 259 L 259

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>CAC1E_RABIT (Q02343) Voltage-dependent R-type calcium channel alpha-1E subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.3)
            (Calcium channel, L type, alpha-1 polypeptide, isoform 6)
            (Brain calcium channel II) (BII)
          Length = 2259

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 28/97 (28%), Positives = 36/97 (37%)
 Frame = +2

Query: 56   NPELHHYNPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSIRMLRVHGSFPSFS 235
            +PE H   P  SPS GR      +G G   +S IP +    +P  S R L      P   
Sbjct: 2060 SPERH---PSRSPSEGRSQSPSRQGTGSLSESSIPSVSDTSTPRHSRRQL------PPVP 2110

Query: 236  PDAKHFALNGDFFKSPGVTILRADGSKRWVLAKQPNL 346
            P  +         + P      ADGS+   L   P L
Sbjct: 2111 PKPRPLLSYSSLKQQPSNFSPPADGSQGGSLLASPAL 2147

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>TRUC_VIBPA (Q87MD4) tRNA pseudouridine synthase C (EC 5.4.99.-) (tRNA-uridine|
           isomerase C) (tRNA pseudouridylate synthase C)
          Length = 246

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = -1

Query: 208 TEHADGAHRAAHRLQVGDHRVALHARTTEPVVP 110
           T H DG H    R +   HR+ LHA     V P
Sbjct: 183 TSHGDGKHNKLFRNEFDSHRLLLHASELRFVHP 215

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>TOLB_RHOPA (Q6NAR1) Protein tolB precursor|
          Length = 444

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 2/124 (1%)
 Frame = +2

Query: 2   IELFDLETEQFTAVTSLLNPELHHYNPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRS 181
           + LF++ET Q   V +        + P FSP G R+     +G    G+S + ++  +RS
Sbjct: 238 VYLFNVETGQREIVGNFPGMS---FAPRFSPDGQRIIMSLQQG----GNSNL-FVMDLRS 289

Query: 182 PVSS-IRMLRVHGSFPSFSPDAKHFALNGDFFKSPGVTILRADGSKRWVLAKQPNLFYTS 358
             ++ +       + PS++PD        D    P + I+ A G +   ++     + T 
Sbjct: 290 KATTRLTDTPAIDTSPSYAPDGSRICFESDRGGKPQIYIMPASGGQAQRISFGDGSYSTP 349

Query: 359 -WSP 367
            WSP
Sbjct: 350 VWSP 353

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>NQO5_THET8 (Q56219) NADH-quinone oxidoreductase subunit 5 (EC 1.6.99.5) (NADH|
           dehydrogenase I chain 5) (NDH-1 subunit 5)
          Length = 207

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
 Frame = -2

Query: 309 PSARRIVTPGDLKKSPLRAKCFASGE-----KDGKEPCTRSMRMELTGLRTG 169
           P  R+I+TP DL+  PLR K +  GE     ++G+       R  LTG   G
Sbjct: 130 PDLRKILTPEDLEGHPLR-KDYPLGETPTLFREGRYIIPAEFRAALTGKDPG 180

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>ETV5_HUMAN (P41161) ETS translocation variant 5 (Ets-related protein ERM)|
          Length = 510

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -1

Query: 160 GDHRVALHARTTEPVVPEAP 101
           GD+R + H + +EP+VP AP
Sbjct: 237 GDNRPSYHRQMSEPIVPAAP 256

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>MYOB_TOXGO (O00936) Myosin B/C (MyoB/C) (TgM-B)|
          Length = 1171

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 318 RLEPSARRIVTPGDLKKSPLRAKCFASGEKDGKEPC 211
           RLE +ARR + P  +  SP   +   SG +  + PC
Sbjct: 815 RLESNARRHLEPDSINISPEEREALLSGMERPRNPC 850

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>CABP1_RAT (O88751) Calcium-binding protein 1 (CaBP1) (Caldendrin)|
          Length = 298

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 26/79 (32%), Positives = 35/79 (44%)
 Frame = -2

Query: 312 EPSARRIVTPGDLKKSPLRAKCFASGEKDGKEPCTRSMRMELTGLRTGCR*GIIESPCTP 133
           +P  R    PG    SP  A C   G+   + P  R +  +  G R G R G+ ++ C P
Sbjct: 34  DPGLRGRRLPGPCPDSP--ATC---GDPSSRRPLCRPVPRD-EGAR-GSRRGLPQAHCRP 86

Query: 132 APRNRWYPRRPPDGEKNGL 76
             R    P R  DGE+ GL
Sbjct: 87  --RETLPPARGRDGEERGL 103

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>TR11B_MOUSE (O08712) Tumor necrosis factor receptor superfamily member 11B|
           precursor (Osteoprotegerin) (Osteoclastogenesis
           inhibitory factor)
          Length = 401

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
 Frame = -2

Query: 321 HRLEPSARRIVTPGDLKKSPLRAKC---FASGEKDGKEPCTRSMRMELTGL 178
           HR  P    +V  G  +++ +  KC   F SGE   K PC +       GL
Sbjct: 121 HRSCPPGSGVVQAGTPERNTVCKKCPDGFFSGETSSKAPCIKHTNCSTFGL 171

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>TOLB_YERPS (Q66D90) Protein tolB precursor|
          Length = 430

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
 Frame = +2

Query: 68  HHYNPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRS-PVSSIRMLRVHGSFPSFSPDA 244
           H+  P FSP G +L +     A  +  S+  Y+  + S  +S +   R + + PS+ PD+
Sbjct: 245 HNGAPAFSPDGTKLAF-----ALSKSGSLNLYVMDLASGQISQVTDGRSNNTEPSWFPDS 299

Query: 245 KHFALNGDFFKSPGVTILRADG 310
           ++ A   D    P V  +  +G
Sbjct: 300 QNLAYTSDQGGRPQVYKVNING 321

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>TOLB_YERPE (Q8ZGZ1) Protein tolB precursor|
          Length = 430

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
 Frame = +2

Query: 68  HHYNPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRS-PVSSIRMLRVHGSFPSFSPDA 244
           H+  P FSP G +L +     A  +  S+  Y+  + S  +S +   R + + PS+ PD+
Sbjct: 245 HNGAPAFSPDGTKLAF-----ALSKSGSLNLYVMDLASGQISQVTDGRSNNTEPSWFPDS 299

Query: 245 KHFALNGDFFKSPGVTILRADG 310
           ++ A   D    P V  +  +G
Sbjct: 300 QNLAYTSDQGGRPQVYKVNING 321

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>CHLL_ANASP (Q8YM62) Light-independent protochlorophyllide reductase|
           iron-sulfur ATP-binding protein (EC 1.18.-.-) (LI-POR
           subunit L) (DPOR subunit L)
          Length = 288

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = +2

Query: 140 QGDSMIPYLQPVRSPVSSIRMLRVHGSFPSFSPDAKHFALNGDFFKSPG 286
           + D  + Y+      ++   + R  G  P+ +PD + F+L  DF+ +PG
Sbjct: 224 ESDPSLNYVCDYYLSIADQILARPEGVVPNDAPDRELFSLLSDFYLNPG 272

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>CT026_HUMAN (Q8NHU2) Protein C20orf26|
          Length = 1237

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 24/88 (27%), Positives = 33/88 (37%), Gaps = 18/88 (20%)
 Frame = +2

Query: 53  LNPELHHYNPFFSPSGGRLG-----YHRFRGAGVQGDSMIPY-------------LQPVR 178
           LNP   HY  FF     RLG     Y+R      +G    PY             ++P R
Sbjct: 563 LNPIFRHYTKFFLKEILRLGFKSCLYYRVYPKSREGKFQNPYAHSLTSALHYLVPVRPRR 622

Query: 179 SPVSSIRMLRVHGSFPSFSPDAKHFALN 262
             V  +  L ++    + S D   +ALN
Sbjct: 623 QIVYPLEKLGINAPSKAVSKDPMSYALN 650

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>PPME1_GIBZE (Q4IQC1) Protein phosphatase methylesterase 1 (EC 3.1.1.-) (PME-1)|
          Length = 400

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
 Frame = +2

Query: 26  EQFTAVTSLLNPELHHYNPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSIRML 205
           E+  ++ S  +PE+ ++    SP G    +    GAG  G S       +R  +S+  +L
Sbjct: 89  EREVSLKSEQDPEVIYHAYLTSPVGKGPLFVMHHGAGSSGLSFAVVASQIRKRISTAGIL 148

Query: 206 ----RVHGSFPSFSPDAKHFALNGDFFKS 280
               R HGS  +++P+ K F +  D   S
Sbjct: 149 ALDCRGHGS--TYAPEDKAFDMRLDTLSS 175

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>POLG_HCVJF (Q99IB8) Genome polyprotein [Contains: Core protein p21 (Capsid|
            protein C) (p21); Core protein p19; Envelope glycoprotein
            E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68)
            (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine
            protease/N
          Length = 3032

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 18/46 (39%), Positives = 22/46 (47%)
 Frame = +2

Query: 17   LETEQFTAVTSLLNPELHHYNPFFSPSGGRLGYHRFRGAGVQGDSM 154
            L  E  TA+ SL    L+   P F+  G   GY R R +GV   SM
Sbjct: 2686 LPEEARTAIHSLTE-RLYVGGPMFNSKGQTCGYRRCRASGVLTTSM 2730

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>DPOL_HBVWJ (P17394) P protein [Includes: DNA-directed DNA polymerase (EC|
           2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49);
           Ribonuclease H (EC 3.1.26.4)]
          Length = 843

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
 Frame = +2

Query: 77  NPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQ-PVRSPVSSIRMLRVHGSFPSFSPDAKHF 253
           NP   PS GRLG +R            P L+ P R       +     S PS  PD  HF
Sbjct: 785 NPADDPSRGRLGLYR------------PLLRLPYRPTTGRTSLYADSPSVPSHLPDRVHF 832

Query: 254 A 256
           A
Sbjct: 833 A 833

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>DPOL_HBVWI (P17393) P protein [Includes: DNA-directed DNA polymerase (EC|
           2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49);
           Ribonuclease H (EC 3.1.26.4)]
          Length = 843

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
 Frame = +2

Query: 77  NPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQ-PVRSPVSSIRMLRVHGSFPSFSPDAKHF 253
           NP   PS GRLG +R            P L+ P R       +     S PS  PD  HF
Sbjct: 785 NPADDPSRGRLGLYR------------PLLRLPYRPTTGRTSLYADSPSVPSHLPDRVHF 832

Query: 254 A 256
           A
Sbjct: 833 A 833

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>TOLB_VIBCH (Q9KR11) Protein tolB precursor|
          Length = 450

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 18/61 (29%), Positives = 24/61 (39%)
 Frame = +2

Query: 77  NPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSIRMLRVHGSFPSFSPDAKHFA 256
           +P +SP G  L Y  F+     G + I  +         +     H   P FSPD K  A
Sbjct: 224 SPAWSPDGQTLAYVSFQN----GQAEIYMMNIYSGKREKLTSFPRHNGAPRFSPDGKTLA 279

Query: 257 L 259
           L
Sbjct: 280 L 280

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>TOLB_RHIME (Q926C2) Protein tolB precursor|
          Length = 436

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 2/124 (1%)
 Frame = +2

Query: 2   IELFDLETEQFTAVTSLLNPELHHYNPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRS 181
           + L  LET Q   V +        + P FSP G R+          +G++ I Y   +RS
Sbjct: 230 VYLLQLETGQREVVGNFPGMT---FAPRFSPDGQRV----IMSLQQEGNANI-YTMDLRS 281

Query: 182 PVSS-IRMLRVHGSFPSFSPDAKHFALNGDFFKSPGVTILRADGSKRWVLAKQPNLFYTS 358
             ++ +       + PS+SPD        D      + ++ ADGS +  ++     + T 
Sbjct: 282 RTTTRLTNTAAIDTSPSYSPDGSRIVFESDRGGKQQLYVMGADGSGQTRISFGDGSYSTP 341

Query: 359 -WSP 367
            WSP
Sbjct: 342 VWSP 345

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>VG28_ICHV1 (Q00131) Hypothetical gene 28 protein|
          Length = 590

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = +2

Query: 71  HYNPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPV 175
           HYNPF  P     GY   R  G       PY+ P+
Sbjct: 355 HYNPFVPPQSFGQGYGPERVGGYYPQPPNPYVLPI 389

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>NOTC3_HUMAN (Q9UM47) Neurogenic locus notch homolog protein 3 precursor (Notch 3)|
            [Contains: Notch 3 extracellular truncation; Notch 3
            intracellular domain]
          Length = 2321

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +1

Query: 145  RLDDPLPAACAQPGELHPHAPCARLLPVLLAG 240
            RLD P P    +   L P  P   LLP+L+AG
Sbjct: 1619 RLDFPYPLRDVRGEPLEPPEPSVPLLPLLVAG 1650

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>POLG_HCVNZ (Q81258) Genome polyprotein [Contains: Core protein p21 (Capsid|
            protein C) (p21); Core protein p19; Envelope glycoprotein
            E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68)
            (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine
            protease/N
          Length = 3020

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 41   VTSLLNPELHHYNPFFSPSGGRLGYHRFRGAGV 139
            V S L   L+   P F+  G + GY R R +GV
Sbjct: 2681 VISSLTERLYCGGPMFNSKGAQCGYRRCRASGV 2713

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>PKN3_MYXXA (Q9XBQ0) Serine/threonine-protein kinase pkn3 (EC 2.7.11.1)|
          Length = 547

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +2

Query: 101 GRLGYHRFRGAGVQGDSMIPYLQPVRSPV 187
           G   Y+ F GAG  G   +PY  P  +PV
Sbjct: 399 GFFAYYFFMGAGSGGAQDLPYALPTNAPV 427


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,723,715
Number of Sequences: 219361
Number of extensions: 855223
Number of successful extensions: 3038
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 2920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3030
length of database: 80,573,946
effective HSP length: 97
effective length of database: 59,295,929
effective search space used: 1423102296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result