ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast48h04 |
|---|---|
| Clone Library Name | barley_pub |
>HCN2_HUMAN (Q9UL51) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 2 (Brain cyclic nucleotide gated channel 2) (BCNG-2) Length = 889 Score = 31.2 bits (69), Expect = 0.62 Identities = 29/99 (29%), Positives = 34/99 (34%) Frame = -1 Query: 390 PPPHGLPNRQVPVHLSSSGRHLEAPGQGPLRQRHPPGGEGAPRAVPAAHWQRLRERGRGX 211 PPP P +Q P + PG GP +HPP E P R R R R Sbjct: 25 PPPPAPPQQQPPPPPPPA----PPPGPGPAPPQHPPRAEALPPEAADEGGPRGRLRSRDS 80 Query: 210 XXXXXXXXXXXXXXVGHGRRARSPNRGAEGRGERESTCA 94 G SPN G GRGE + + A Sbjct: 81 SCGRPGTPGAASTAKG------SPN-GECGRGEPQCSPA 112
>PRP_PIG (Q95JC9) Basic proline-rich protein precursor [Contains:| Proline-rich peptide SP-A (PRP-SP-A); Proline-rich peptide SP-B (PRP-SP-B); Parotid hormone (PH-Ab)] Length = 676 Score = 30.8 bits (68), Expect = 0.81 Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 3/51 (5%) Frame = -1 Query: 396 LLPPPHGLPNRQVPVHLSSSGRHLEAP---GQGPLRQRHPPGGEGAPRAVP 253 L PPP G P R P S H + P G GP + PPG P P Sbjct: 35 LRPPPGGGPPRPPPPEESQGEGHQKRPRPPGDGPEQGPAPPGARPPPGPPP 85
>LOXL4_MOUSE (Q924C6) Lysyl oxidase homolog 4 precursor (EC 1.4.3.-) (Lysyl| oxidase-like protein 4) (Lysyl oxidase-related protein C) Length = 757 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Frame = -1 Query: 381 HGLPNRQVPVHLSSSGRHLEAPGQGPL---RQRHPPGGEGAPRAVPAAHWQRLRERG 220 HG + +V L GR LE P+ +RH P EGA HW+++ ++G Sbjct: 139 HGYHSEKVSNALGPQGRRLEEVRLKPILASAKRHSPVTEGAVEVRYDGHWRQVCDQG 195
>CN004_MOUSE (Q8K3X4) Protein C14orf4 homolog| Length = 775 Score = 30.0 bits (66), Expect = 1.4 Identities = 21/61 (34%), Positives = 28/61 (45%) Frame = -1 Query: 396 LLPPPHGLPNRQVPVHLSSSGRHLEAPGQGPLRQRHPPGGEGAPRAVPAAHWQRLRERGR 217 +LPPPHGL + P + G APG GP PPG + P++ + E G Sbjct: 250 VLPPPHGLGGSRGPPTPAPPG----APG-GPACLGGPPGVSATVSSAPSSTSSTVAEVGV 304 Query: 216 G 214 G Sbjct: 305 G 305
>HRG_RABIT (Q28640) Histidine-rich glycoprotein precursor| (Histidine-proline-rich glycoprotein) (HPRG) (Fragment) Length = 526 Score = 30.0 bits (66), Expect = 1.4 Identities = 16/40 (40%), Positives = 16/40 (40%) Frame = -1 Query: 390 PPPHGLPNRQVPVHLSSSGRHLEAPGQGPLRQRHPPGGEG 271 PPPHG P P H P GP HPP G G Sbjct: 377 PPPHGHPPHGPPPH--------GHPPHGPPPHGHPPHGHG 408 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/49 (34%), Positives = 17/49 (34%) Frame = -1 Query: 390 PPPHGLPNRQVPVHLSSSGRHLEAPGQGPLRQRHPPGGEGAPRAVPAAH 244 PPPHG P P H P GP HPP G P H Sbjct: 367 PPPHGHPPHGPPPH--------GHPPHGPPPHGHPPHGPPPHGHPPHGH 407
>SFPQ_HUMAN (P23246) Splicing factor, proline- and glutamine-rich| (Polypyrimidine tract-binding protein-associated splicing factor) (PTB-associated splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) (100-kDa DNA-pairing protein) (hPOMp Length = 707 Score = 29.6 bits (65), Expect = 1.8 Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 4/50 (8%) Frame = -1 Query: 390 PPPHGLPNRQV----PVHLSSSGRHLEAPGQGPLRQRHPPGGEGAPRAVP 253 PPPH P++Q P SS + PG P PP AP A P Sbjct: 87 PPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATP 136
>IASPP_HUMAN (Q8WUF5) RelA-associated inhibitor (Inhibitor of ASPP protein)| (Protein iASPP) (PPP1R13B-like protein) (NFkB-interacting protein 1) Length = 828 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 6/30 (20%) Frame = -1 Query: 318 PGQGPLRQRHPP------GGEGAPRAVPAA 247 PG GPLRQ+ PP G G+PR P A Sbjct: 161 PGPGPLRQQGPPTPFDFLGRAGSPRGSPLA 190
>CO4A1_HUMAN (P02462) Collagen alpha-1(IV) chain precursor| Length = 1669 Score = 29.6 bits (65), Expect = 1.8 Identities = 18/42 (42%), Positives = 20/42 (47%) Frame = -1 Query: 390 PPPHGLPNRQVPVHLSSSGRHLEAPGQGPLRQRHPPGGEGAP 265 P P GLP + S G PG GP R PPGG+G P Sbjct: 784 PGPPGLPGS-----VGSPG----VPGIGPPGARGPPGGQGPP 816
>M3K1_HUMAN (Q13233) Mitogen-activated protein kinase kinase kinase 1 (EC| 2.7.11.25) (MAPK/ERK kinase kinase 1) (MEK kinase 1) (MEKK 1) (Fragment) Length = 1495 Score = 29.6 bits (65), Expect = 1.8 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 4/64 (6%) Frame = -1 Query: 393 LPPPHGLPNRQVPVHLSSSGRHLEAPGQGPLR----QRHPPGGEGAPRAVPAAHWQRLRE 226 +PPPHG +R+ HL+ S ++ P ++ P E +P A PA +E Sbjct: 91 VPPPHGAASRR-GAHLTESVAAPDSGASSPAAAEPGEKRAPAAEPSPAAAPAGREMENKE 149 Query: 225 RGRG 214 +G Sbjct: 150 TLKG 153
>VASP_HUMAN (P50552) Vasodilator-stimulated phosphoprotein (VASP)| Length = 379 Score = 29.3 bits (64), Expect = 2.4 Identities = 19/55 (34%), Positives = 22/55 (40%) Frame = -1 Query: 390 PPPHGLPNRQVPVHLSSSGRHLEAPGQGPLRQRHPPGGEGAPRAVPAAHWQRLRE 226 PPP GLP VP +G P Q GG GAP A +LR+ Sbjct: 182 PPPPGLPPSGVPAAAHGAGGGPPPAPPLPAAQGPGGGGAGAPGLAAAIAGAKLRK 236
>CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48)| Length = 2441 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/46 (36%), Positives = 21/46 (45%) Frame = -1 Query: 390 PPPHGLPNRQVPVHLSSSGRHLEAPGQGPLRQRHPPGGEGAPRAVP 253 P LP +Q+ LS+ R AP Q P Q PP +PR P Sbjct: 2324 PQASHLPGQQIATSLSNQVRS-PAPVQSPRPQSQPPHSSPSPRIQP 2368
>ADA2A_HUMAN (P08913) Alpha-2A adrenergic receptor (Alpha-2A adrenoceptor)| (Alpha-2A adrenoreceptor) (Alpha-2AAR) (Alpha-2 adrenergic receptor subtype C10) Length = 450 Score = 29.3 bits (64), Expect = 2.4 Identities = 25/79 (31%), Positives = 30/79 (37%) Frame = -1 Query: 345 SSSGRHLEAPGQGPLRQRHPPGGEGAPRAVPAAHWQRLRERGRGXXXXXXXXXXXXXXXV 166 SSS H E P GP R P G+G RA L RG G V Sbjct: 296 SSSSDHAERP-PGPRRPERGPRGKGKARASQVKPGDSLPRRGPGATGIGTPAAGPGEERV 354 Query: 165 GHGRRARSPNRGAEGRGER 109 G + +R RG + R +R Sbjct: 355 GAAKASRW--RGRQNREKR 371
>CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)| Length = 2442 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/46 (36%), Positives = 21/46 (45%) Frame = -1 Query: 390 PPPHGLPNRQVPVHLSSSGRHLEAPGQGPLRQRHPPGGEGAPRAVP 253 P LP +Q+ LS+ R AP Q P Q PP +PR P Sbjct: 2325 PQASHLPGQQIATSLSNQVRS-PAPVQSPRPQSQPPHSSPSPRIQP 2369
>CUTL2_HUMAN (O14529) Homeobox protein cut-like 2 (Homeobox protein Cux-2)| (Cut-like 2) Length = 1424 Score = 28.9 bits (63), Expect = 3.1 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 2/23 (8%) Frame = -1 Query: 315 GQGPLRQRHP--PGGEGAPRAVP 253 GQGP ++ HP PG +G P+ P Sbjct: 1262 GQGPPKEEHPDPPGNDGLPKVAP 1284
>ENA_DROME (Q8T4F7) Protein enabled| Length = 834 Score = 28.9 bits (63), Expect = 3.1 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 3/48 (6%) Frame = -1 Query: 393 LPPPHGL---PNRQVPVHLSSSGRHLEAPGQGPLRQRHPPGGEGAPRA 259 +PPP P QVP+ + + PGQ PL + GG G P A Sbjct: 508 VPPPQQQAENPYGQVPMPPPMNPSQQQQPGQVPLNRMSSQGGPGGPPA 555
>RSMB_DROME (Q05856) Small nuclear ribonucleoprotein-associated protein B| (snRNP-B) (Sm protein B) (Sm-B) (SmB) Length = 199 Score = 28.9 bits (63), Expect = 3.1 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 20/64 (31%) Frame = -1 Query: 390 PPPHGLPN-----------------RQVPVHLSSSGRHLEAPGQG---PLRQRHPPGGEG 271 PP GLP R +P++LS+ L+ P +G P +Q P G G Sbjct: 87 PPEEGLPRVPIPGAAPGPGIGRVAGRGMPINLSAVPAGLQGPVRGVGGPAQQHMAPMGRG 146 Query: 270 APRA 259 PRA Sbjct: 147 VPRA 150
>RPTN_MOUSE (P97347) Repetin| Length = 1130 Score = 28.9 bits (63), Expect = 3.1 Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 4/101 (3%) Frame = -1 Query: 393 LPPPHGLPNRQ-VPVHLSSSGRHLEAPGQGPLRQRH---PPGGEGAPRAVPAAHWQRLRE 226 L P G RQ HL GRH ++P QG + RH P G+ + + + Q+ R+ Sbjct: 675 LSPHQGQKGRQDQSPHLGQKGRHDQSPHQGQ-KGRHDQSPHQGQKGRQDLSSHQGQKGRQ 733 Query: 225 RGRGXXXXXXXXXXXXXXXVGHGRRARSPNRGAEGRGERES 103 + GR+ +SP++G +GR ++ S Sbjct: 734 -DQSPHLGQKGRHDQSPHRGQKGRQDQSPHQGQKGRQDQSS 773
>COL36_CAEEL (P34803) Cuticle collagen 36| Length = 307 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/46 (34%), Positives = 22/46 (47%) Frame = -1 Query: 390 PPPHGLPNRQVPVHLSSSGRHLEAPGQGPLRQRHPPGGEGAPRAVP 253 P P GLP + G +A G GP+ + PPG +G P+ P Sbjct: 245 PGPKGLPGIAGLTEIGGQGPPGDAGGPGPVGGQGPPGPQG-PQGPP 289
>TIP60_MOUSE (Q8CHK4) Histone acetyltransferase HTATIP (EC 2.3.1.48) (60 kDa Tat| interactive protein) (Tip60) Length = 513 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/42 (38%), Positives = 19/42 (45%) Frame = -1 Query: 378 GLPNRQVPVHLSSSGRHLEAPGQGPLRQRHPPGGEGAPRAVP 253 G P R+VP +SG+ L P Q LR P E P P Sbjct: 89 GSPEREVPASAQASGKTLPIPVQITLRFNLPKEREAIPGGEP 130
>TIP60_HUMAN (Q92993) Histone acetyltransferase HTATIP (EC 2.3.1.48) (60 kDa Tat| interactive protein) (Tip60) (HIV-1 Tat interactive protein) (cPLA(2)-interacting protein) Length = 513 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/42 (38%), Positives = 19/42 (45%) Frame = -1 Query: 378 GLPNRQVPVHLSSSGRHLEAPGQGPLRQRHPPGGEGAPRAVP 253 G P R+VP +SG+ L P Q LR P E P P Sbjct: 89 GSPEREVPASAQASGKTLPIPVQITLRFNLPKEREAIPGGEP 130
>STK35_HUMAN (Q8TDR2) Serine/threonine-protein kinase 35 (EC 2.7.11.1)| (CLP-36-interacting kinase) (Clik1) (PDLIM1-interacting kinase 1) Length = 401 Score = 28.5 bits (62), Expect = 4.0 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = -1 Query: 324 EAPGQGPLRQRHPPGGEGAPRAVPAAHWQRLRERGRG 214 EAPG+ L +R P GG G+ R + L E GRG Sbjct: 46 EAPGEAFLARRRPEGGGGSAR----PRYSLLAEIGRG 78
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 28.5 bits (62), Expect = 4.0 Identities = 17/48 (35%), Positives = 20/48 (41%) Frame = -1 Query: 390 PPPHGLPNRQVPVHLSSSGRHLEAPGQGPLRQRHPPGGEGAPRAVPAA 247 P P P ++ AP QGP R PG + APR PAA Sbjct: 97 PRPSAAPKAPAAQQPAAPSAPAPAPSQGP---RPTPGPKPAPRPAPAA 141
>WIT1_HUMAN (Q06250) Wilms' tumor-associated protein (WIT-1) (Wilms tumor| upstream neighbor 1 gene protein) Length = 92 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = -1 Query: 375 LPNRQVPVHLSSSGRHLEAPG-QGPLRQRHPPGG 277 L R+ P+HL+ G L P QGP+R PP G Sbjct: 51 LSPRRCPLHLTERGAGLLQPQPQGPVRTPGPPSG 84
>WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-WASP)| Length = 505 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = +3 Query: 3 PPLPLTRAPFLSSPPTARPPLSLSLSV 83 PPLP + S PP PPLS+S SV Sbjct: 345 PPLPALPSSAPSGPPPPPPPLSVSGSV 371
>SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich| (Polypyrimidine tract-binding protein-associated splicing factor) (PTB-associated splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) Length = 699 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Frame = -1 Query: 390 PPPHGLPNRQVPVHLSSSGRHL-EAPGQGPLRQRHPPGGEGAPRAVP 253 PPPH P++Q P S + + PG P PP AP A P Sbjct: 86 PPPHQPPHQQPPPPPQESKPVVPQGPGSAPGVSSAPPPAVSAPPANP 132
>GLIS1_HUMAN (Q8NBF1) Zinc finger protein GLIS1 (GLI-similar 1)| Length = 620 Score = 28.1 bits (61), Expect = 5.3 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = -1 Query: 396 LLPPPHGLPNRQVPVHLSSSGRHLEAP 316 LLPP H +P+R P+ ++S H +P Sbjct: 417 LLPPAHDVPSRHHPLDATTSSHHHLSP 443
>SOX11_CHICK (P48435) Transcription factor SOX-11| Length = 396 Score = 28.1 bits (61), Expect = 5.3 Identities = 20/58 (34%), Positives = 24/58 (41%) Frame = -1 Query: 387 PPHGLPNRQVPVHLSSSGRHLEAPGQGPLRQRHPPGGEGAPRAVPAAHWQRLRERGRG 214 PP GL VP+HL GR G+ P+R P+ A W R R G G Sbjct: 293 PPAGLSPASVPLHLHLVGRQ-RGGGRPPVR----------PQPQLLAAWPRRRRAGGG 339
>ADA2B_HORSE (O77721) Alpha-2B adrenergic receptor (Alpha-2B adrenoceptor)| (Alpha-2B adrenoreceptor) (Fragment) Length = 389 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/40 (42%), Positives = 21/40 (52%) Frame = +1 Query: 241 PMGGGYRARSSFPAGRVALAERPLPRSLQVAAAAGQMNGN 360 P GGG + PAG A A+ LP AAAG+ NG+ Sbjct: 200 PGGGGSKQPHPVPAGASASAK--LPTVASCLAAAGEANGH 237
>ARI1B_HUMAN (Q8NFD5) AT-rich interactive domain-containing protein 1B (ARID| domain-containing protein 1B) (Osa homolog 2) (hOsa2) (p250R) (BRG1-binding protein hELD/OSA1) (BRG1-associated factor 250b) (BAF250B) Length = 2236 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 4/33 (12%) Frame = -1 Query: 339 SGRHLEAPGQGPLRQRHPP----GGEGAPRAVP 253 +G E PG G L + PP GG G P AVP Sbjct: 196 AGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVP 228
>FUT4_MOUSE (Q11127) Alpha-(1,3)-fucosyltransferase (EC 2.4.1.-) (Galactoside| 3-L-fucosyltransferase) (Fucosyltransferase 4) (FUCT-IV) (Fuc-TIV) Length = 433 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = -1 Query: 348 LSSSGRHLEAPGQGPLRQRHPPGGEGAPRAV 256 +++ GRH+E PG R+R GG G PR+V Sbjct: 27 VATRGRHMETPG---YRRRTRCGGWGLPRSV 54
>CR1KA_BACTM (Q45715) Pesticidal crystal protein cry1Ka (Insecticidal| delta-endotoxin CryIK(a)) (Crystaline entomocidal protoxin) (137 kDa crystal protein) Length = 1215 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/40 (35%), Positives = 18/40 (45%) Frame = +1 Query: 253 GYRARSSFPAGRVALAERPLPRSLQVAAAAGQMNGNLTIG 372 GYR + PAG V L P + QV G+ G +G Sbjct: 1167 GYRNHTPLPAGYVTLELEYFPETEQVWIEIGETEGTFIVG 1206
>PRB4S_HUMAN (P10163) Basic salivary proline-rich protein 4 allele S precursor| (Salivary proline-rich protein Po) (Parotid o protein) [Contains: Protein N1; Glycosylated protein A] Length = 247 Score = 27.7 bits (60), Expect = 6.9 Identities = 19/61 (31%), Positives = 23/61 (37%), Gaps = 7/61 (11%) Frame = -1 Query: 390 PPPHGLPNRQVPVHLSSSGRHLEAPG-------QGPLRQRHPPGGEGAPRAVPAAHWQRL 232 PPP G P R P + S R PG QG + + PP G P P + Sbjct: 114 PPPPGKPERPPPQGGNQSHRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNKS 173 Query: 231 R 229 R Sbjct: 174 R 174
>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2157 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/48 (33%), Positives = 20/48 (41%) Frame = -1 Query: 396 LLPPPHGLPNRQVPVHLSSSGRHLEAPGQGPLRQRHPPGGEGAPRAVP 253 L PPP G P P ++ G + P P R R GG P+ P Sbjct: 1137 LAPPPPGAPPSPAPARFTARGGRVFTPRGVPSR-RGRGGGRPPPQVCP 1183
>MTCH1_MOUSE (Q791T5) Mitochondrial carrier homolog 1 (Mitochondrial| carrier-like protein 1) Length = 389 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/33 (45%), Positives = 15/33 (45%) Frame = -2 Query: 344 PAAAATWRLRGRGLSASATLPAGKELLARYPPP 246 P AA G G A PAG E AR PPP Sbjct: 13 PGGAAGMAGAGAGAGARGGAPAGVEARARDPPP 45
>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2160 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/48 (33%), Positives = 20/48 (41%) Frame = -1 Query: 396 LLPPPHGLPNRQVPVHLSSSGRHLEAPGQGPLRQRHPPGGEGAPRAVP 253 L PPP G P P ++ G + P P R R GG P+ P Sbjct: 1140 LAPPPPGAPPSPAPARFTARGGRVFTPRGVPSR-RGRGGGRPPPQVCP 1186
>API1_SOLTU (Q41480) Aspartic protease inhibitor 1 precursor (pA1) (gCDI-A1)| (STPIA) (STPID) Length = 221 Score = 27.7 bits (60), Expect = 6.9 Identities = 9/18 (50%), Positives = 13/18 (72%) Frame = -2 Query: 395 FSHHLMACPIVRFPFICP 342 F ++L+ CPI R P +CP Sbjct: 167 FGYNLLYCPITRPPIVCP 184
>DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 406 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = +3 Query: 3 PPLPLTRAPFLSSPPTARP 59 PP P AP +S PPTA+P Sbjct: 324 PPPPSQAAPDMSKPPTAQP 342
>ZBED3_HUMAN (Q96IU2) Zinc finger BED domain-containing protein 3| Length = 234 Score = 27.3 bits (59), Expect = 9.0 Identities = 22/90 (24%), Positives = 29/90 (32%), Gaps = 18/90 (20%) Frame = -1 Query: 342 SSGRHLEAPGQGPLRQRHPPGGEGAPRAV--------------PAAHWQRLR----ERGR 217 ++ R + PG GP PPG GAP + P+ HW R + GR Sbjct: 19 AAARGGQCPGLGPAPTPTPPGRLGAPYSEAWGYFHLAPGRPGHPSGHWATCRLCGEQVGR 78 Query: 216 GXXXXXXXXXXXXXXXVGHGRRARSPNRGA 127 G H R S G+ Sbjct: 79 GPGFHAGTSALWRHLRSAHRRELESSGAGS 108
>TRAI5_ECOLI (Q00192) Protein traI| Length = 747 Score = 27.3 bits (59), Expect = 9.0 Identities = 22/76 (28%), Positives = 24/76 (31%), Gaps = 3/76 (3%) Frame = -1 Query: 357 PVHLSSSGRHLEAPGQGPLRQRHPPGGEGAPRA---VPAAHWQRLRERGRGXXXXXXXXX 187 P H +GR PGQ P +H G RA PAA GRG Sbjct: 522 PEHRGRTGRGAGGPGQRPAADQHATGAAAVARAGDGRPAA--------GRGDRADAGLHA 573 Query: 186 XXXXXXVGHGRRARSP 139 GR R P Sbjct: 574 ATVHRKPDVGRLGRKP 589
>DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 407 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = +3 Query: 3 PPLPLTRAPFLSSPPTARP 59 PP P AP +S PPTA+P Sbjct: 324 PPPPSQAAPDMSKPPTAQP 342
>PRP2_MOUSE (P05142) Proline-rich protein MP-2 precursor| Length = 261 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/38 (42%), Positives = 17/38 (44%) Frame = -1 Query: 390 PPPHGLPNRQVPVHLSSSGRHLEAPGQGPLRQRHPPGG 277 PPP G P +Q P G P QGP PPGG Sbjct: 191 PPPTGGPQQQPPQGPPPPGGPQPRPPQGP----PPPGG 224
>ODO2_PIG (Q9N0F1) Dihydrolipoyllysine-residue succinyltransferase component| of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor (EC 2.3.1.61) (Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex) (E2) (E2K) Length = 455 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = +3 Query: 3 PPLPLTRAPFLSSPPTARPPLS 68 PP PLT P + PTA PP++ Sbjct: 192 PPQPLTSKPVSAVKPTAAPPVA 213
>GDF7_CERAE (Q9BDW8) Growth/differentiation factor 7 precursor (GDF-7)| Length = 447 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/49 (34%), Positives = 18/49 (36%) Frame = -1 Query: 288 PPGGEGAPRAVPAAHWQRLRERGRGXXXXXXXXXXXXXXXVGHGRRARS 142 P G G+PRAV A R R GHGRR RS Sbjct: 300 PGTGTGSPRAVTAGR----RRRRTALAGTRTAQGSGGGAGRGHGRRGRS 344
>HORN_HUMAN (Q86YZ3) Hornerin| Length = 2850 Score = 27.3 bits (59), Expect = 9.0 Identities = 24/94 (25%), Positives = 33/94 (35%), Gaps = 5/94 (5%) Frame = -1 Query: 351 HLSSSGRHLEAPGQGPLRQRH-PPGGEGAPRAVPAAHWQRLRERGRGXXXXXXXXXXXXX 175 H SS GRH GQ +H G+ + + RGR Sbjct: 837 HFSSQGRHGSTSGQSSSSGQHDSSSGQSSSYGQHESASHHASGRGR--------HGSGSG 888 Query: 174 XXVGHGRR----ARSPNRGAEGRGERESTCARAH 85 GHG+R +SP+ G G G S+ + H Sbjct: 889 QSPGHGQRGSGSGQSPSYGRHGSGSGRSSSSGRH 922
>RED2_HUMAN (Q9NS39) Double-stranded RNA-specific editase B2 (EC 3.5.-.-)| (dsRNA adenosine deaminase B2) (RNA-dependent adenosine deaminase 3) (RNA-editing deaminase 2) (RNA-editing enzyme 2) Length = 739 Score = 27.3 bits (59), Expect = 9.0 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Frame = -1 Query: 378 GLPNRQVPVHLSSSGRHL-EAPGQGPLRQRHPPGGEGAPRAVPAAHWQRLRERGRG 214 G+ N + LS+S + E G L R PP G+ A P A +R E G G Sbjct: 52 GITNTEDDDTLSTSSAEVKENRNVGNLAARPPPSGDRARGGAPGAKRKRPLEEGNG 107
>CO9A3_HUMAN (Q14050) Collagen alpha-3(IX) chain precursor| Length = 684 Score = 27.3 bits (59), Expect = 9.0 Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 4/46 (8%) Frame = -1 Query: 390 PPPHGLPNR---QVPVHLSSSGRHLEAPG-QGPLRQRHPPGGEGAP 265 P P GLP Q P L L PG +GP+ R PPG GAP Sbjct: 216 PGPAGLPGSVGLQGPRGLRGLPGPLGPPGDRGPIGFRGPPGIPGAP 261 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,443,126 Number of Sequences: 219361 Number of extensions: 744004 Number of successful extensions: 3352 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 2906 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3325 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 1370455656 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
