ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast48h03 |
|---|---|
| Clone Library Name | barley_pub |
>TOLB_COXBU (Q83F59) Protein tolB precursor| Length = 437 Score = 39.3 bits (90), Expect = 0.004 Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 8/123 (6%) Frame = +2 Query: 50 LLNPELHHYNPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSIRMLRVHG--SF 223 LL ++ +P +SP G ++ Y F +G YLQ + + R+ G Sbjct: 200 LLVSDMPIMSPTWSPDGNKIAYVSF-----EGHRAAIYLQDLATGRRQ-RLSEAPGINGA 253 Query: 224 PSFSPDAKHFALNGDFFKSPGVTILR-ADG-----SKRWVLAKQPNLFYTSWSPTESGVV 385 P+FSPD K AL +P + IL ADG +K W + +P +WSP ++ Sbjct: 254 PAFSPDGKQLALVLTKTGNPKIYILNLADGHLREITKGWSIDTEP-----AWSPDGKSLL 308 Query: 386 FTS 394 FTS Sbjct: 309 FTS 311
>TOLB_ANAMM (Q5PBH8) Protein tolB precursor| Length = 441 Score = 39.3 bits (90), Expect = 0.004 Identities = 34/131 (25%), Positives = 55/131 (41%), Gaps = 1/131 (0%) Frame = +2 Query: 2 IELFDLETEQFTAVTSLLNPELHHYNPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRS 181 + L DLET TA+ + + +P FSP G H QG + I + Sbjct: 230 VVLHDLETGYSTALGGVRGV---NSSPRFSPDGR----HVLLSESAQGSTNIYSIDLKSG 282 Query: 182 PVSSIRMLRVHGSFPSFSPDAKHFALNGDFFKSPGVTILRADG-SKRWVLAKQPNLFYTS 358 + + R + S+SPD K N D P + ++ ADG ++R + + + + Sbjct: 283 KSTRLTNDRSINTSASYSPDKKSIVFNSDRSGRPQLYVMNADGTNQRRISSGKGGYSAPA 342 Query: 359 WSPTESGVVFT 391 WSP + FT Sbjct: 343 WSPRGDWIAFT 353 Score = 33.5 bits (75), Expect = 0.24 Identities = 24/70 (34%), Positives = 33/70 (47%) Frame = +2 Query: 218 SFPSFSPDAKHFALNGDFFKSPGVTILRADGSKRWVLAKQPNLFYTSWSPTESGVVFTSI 397 S P++SP A KS V +++ DGS +LAK + SWSP ++FT Sbjct: 339 SAPAWSPRGDWIAFTKTEGKSFHVGVMKPDGSGERLLAKGYMVDSPSWSPNGRVILFTQQ 398 Query: 398 GPIFETPKAT 427 P P AT Sbjct: 399 DP----PSAT 404
>TOLB_XANOR (Q5H299) Protein tolB precursor| Length = 439 Score = 38.5 bits (88), Expect = 0.007 Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 8/114 (7%) Frame = +2 Query: 77 NPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPV----RSPVSSIRMLRVHGSFPSFSPDA 244 +P +SP G +L Y F +G+S I YLQ + R VSS R ++G+ PSFSPD Sbjct: 208 SPNWSPDGKKLAYVSFE----RGNSSI-YLQDIATGARELVSSFR--GINGA-PSFSPDG 259 Query: 245 KHFALNGDFFKSPGVTILRADGSKRWVLAKQPNLF----YTSWSPTESGVVFTS 394 + AL +P + ++ GSK+ L + N F +W+P + FTS Sbjct: 260 RRLALALSRSGNPEIYVMDL-GSKQ--LTQLTNHFGIDTEPTWAPDGGSIYFTS 310
>TOLB_XANCP (Q8P6F2) Protein tolB precursor| Length = 439 Score = 38.5 bits (88), Expect = 0.007 Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 8/114 (7%) Frame = +2 Query: 77 NPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPV----RSPVSSIRMLRVHGSFPSFSPDA 244 +P +SP G +L Y F +G+S I YLQ + R VSS R ++G+ PSFSPD Sbjct: 208 SPNWSPDGKKLAYVSFE----RGNSSI-YLQDIASGARELVSSFR--GINGA-PSFSPDG 259 Query: 245 KHFALNGDFFKSPGVTILRADGSKRWVLAKQPNLF----YTSWSPTESGVVFTS 394 + AL +P + ++ GSK+ L + N F +W+P + FTS Sbjct: 260 RRLALALSRSGNPEIYVMDL-GSKQ--LTQLTNHFGIDTEPTWAPDGGSIYFTS 310
>TOLB_XANAC (Q8PHV7) Protein tolB precursor| Length = 439 Score = 38.5 bits (88), Expect = 0.007 Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 8/114 (7%) Frame = +2 Query: 77 NPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPV----RSPVSSIRMLRVHGSFPSFSPDA 244 +P +SP G +L Y F +G+S I YLQ + R VSS R ++G+ PSFSPD Sbjct: 208 SPNWSPDGKKLAYVSFE----RGNSSI-YLQDIATGARELVSSFR--GINGA-PSFSPDG 259 Query: 245 KHFALNGDFFKSPGVTILRADGSKRWVLAKQPNLF----YTSWSPTESGVVFTS 394 + AL +P + ++ GSK+ L + N F +W+P + FTS Sbjct: 260 RRLALALSRSGNPEIYVMDL-GSKQ--LTQLTNHFGIDTEPTWAPDGGSIYFTS 310
>TOLB_MYXXA (Q84FF7) Protein tolB precursor (Adventurous gliding motility| protein W) Length = 431 Score = 37.7 bits (86), Expect = 0.013 Identities = 34/108 (31%), Positives = 45/108 (41%), Gaps = 5/108 (4%) Frame = +2 Query: 86 FSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSIRMLRVH----GSFPSFSPDAKHF 253 FSP G R+ Y G Q + + S R L + P++SPD K Sbjct: 246 FSPDGKRIAYSLAEGESAQ-------VYVANADGSGARALTDTPYGLNTSPTWSPDGKRI 298 Query: 254 ALNGDFFKSPGVTILRADGSKRWVLAKQPNLFYT-SWSPTESGVVFTS 394 A + SP V I+ ADG+ L Q N T WSP +VFT+ Sbjct: 299 AFVSNRGGSPQVYIMNADGTGVRRLTFQGNYNQTPDWSPRGDLIVFTA 346 Score = 30.8 bits (68), Expect = 1.6 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Frame = +2 Query: 227 SFSPDAKHFALNGDFFKSPGVTILRADGSKRWVLAKQPNLFYTS--WSPTESGVVFTS 394 +FSPD K A + +S V + ADGS L P TS WSP + F S Sbjct: 245 AFSPDGKRIAYSLAEGESAQVYVANADGSGARALTDTPYGLNTSPTWSPDGKRIAFVS 302
>TOLB_MANSM (Q65UN0) Protein tolB precursor| Length = 431 Score = 37.4 bits (85), Expect = 0.017 Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 2/108 (1%) Frame = +2 Query: 77 NPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSI-RMLRVHGSFPSFSPDAKHF 253 +P +SP G RL Y F Q +Q + S + + H P+FSPD Sbjct: 209 SPAWSPDGKRLAYVSFENRKSQ-----LVVQDLGSGARKVVASFQGHNGAPAFSPDGSRL 263 Query: 254 ALNGDFFKSPGVTILRADGSKRWVLAK-QPNLFYTSWSPTESGVVFTS 394 A + + ++ A+G + L N SWSP S ++FTS Sbjct: 264 AFASNKEGQLNIYVMGANGGQPTQLTSGSGNNTEPSWSPDGSSILFTS 311
>TOLB_ZYMMO (Q5NR65) Protein tolB precursor| Length = 458 Score = 37.0 bits (84), Expect = 0.022 Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 3/112 (2%) Frame = +2 Query: 74 YNPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSIRMLRVHG--SFPSFSPDAK 247 + P FSP G + + V G++ I Y PV S + R+ G + PSFSPD Sbjct: 274 FAPRFSPDGKTIVF----SMSVAGNTDI-YKVPV-SGGQATRLTTSPGIDTAPSFSPDGS 327 Query: 248 HFALNGDFFKSPGVTILRADGSKRWVLAKQPNLFYTS-WSPTESGVVFTSIG 400 D S + I+ ADGS + ++ + T WSP + FT +G Sbjct: 328 KIVFESDRSGSQQIYIMNADGSNQNRISFGSGRYATPVWSPRGDLIAFTKLG 379
>TOLB_GLUOX (Q5FQB9) Protein tolB precursor| Length = 453 Score = 35.8 bits (81), Expect = 0.048 Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 1/110 (0%) Frame = +2 Query: 74 YNPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSIRMLRVHGSFPSFSPDAKHF 253 + P FSP+GG + RG G D + L R+ + P FSPD Sbjct: 262 FAPRFSPTGGSVVLSATRGGG--SDIFVVDLAS-RAKRQITNSNGAIDTSPCFSPDGSQI 318 Query: 254 ALNGDFFKSPGVTILRADGSKRWVLAKQPNLFYTS-WSPTESGVVFTSIG 400 N D SP + I+ A G ++ + + WSP + FT IG Sbjct: 319 VFNSDRGGSPQLYIMSASGGAAKRISYGSGQYGSPVWSPRGDLIAFTRIG 368
>TOLB_HAEDU (Q7VKU3) Protein tolB precursor| Length = 426 Score = 35.8 bits (81), Expect = 0.048 Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 2/108 (1%) Frame = +2 Query: 77 NPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSI-RMLRVHGSFPSFSPDAKHF 253 +P +SP+G +L Y F Q + +RS S+ L+ H P+FSPD Sbjct: 204 SPEWSPNGSKLAYVTFENKRPQ-----IVVHDLRSGQRSVVAALKGHNGAPAFSPDGSRL 258 Query: 254 ALNGDFFKSPGVTILRADGSKRWVL-AKQPNLFYTSWSPTESGVVFTS 394 A + + I +G L A N SWSP S + FTS Sbjct: 259 AFASNQDGELNIYIANINGGTPIKLTANVGNNTEPSWSPDGSIIYFTS 306
>TOLB_RICTY (Q68X69) Protein tolB precursor| Length = 443 Score = 34.7 bits (78), Expect = 0.11 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Frame = +2 Query: 224 PSFSPDAKHFALNGDFFKSPGVTILRADGSK-RWVLAKQPNLFYTSWSPTESGVVFTSI 397 PS+SPD K N D P + I+ +DGS R + + SWSP + FT I Sbjct: 292 PSYSPDGKKIVYNSDKNGVPQLYIMNSDGSDVRRISFGGGSYASPSWSPRGDYIAFTKI 350
>TOLB_RICPR (Q9ZDM5) Protein tolB precursor| Length = 443 Score = 34.3 bits (77), Expect = 0.14 Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Frame = +2 Query: 224 PSFSPDAKHFALNGDFFKSPGVTILRADGSKRWVLAKQPNLFYT-SWSPTESGVVFTSI 397 PS+SPD K N D P + I+ +DGS ++ + + SWSP + FT I Sbjct: 292 PSYSPDGKKIVFNSDKNGVPQLYIMNSDGSDVQRISFGVGSYASPSWSPRGDYIAFTKI 350
>TOLB_CHLTE (Q8KEQ0) Protein tolB precursor| Length = 434 Score = 33.9 bits (76), Expect = 0.18 Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 6/112 (5%) Frame = +2 Query: 77 NPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSIRMLRVHGSF---PSFSPDAK 247 +P FSP G ++ + R G Q ++Q + S +R L G + PS+SP+ Sbjct: 294 SPTFSPDGSKMAFVSTRQGGPQ-----IFIQDMNS--GQVRRLTYSGIYNTQPSWSPNGD 346 Query: 248 HFALNGDFFKSPGVTI--LRADGSKRWVLAK-QPNLFYTSWSPTESGVVFTS 394 L KS + I + DGS L N + SWSP S +VF+S Sbjct: 347 KI-LYSSMQKSGEINIFSINVDGSGLLQLTSGSGNNEHPSWSPDGSMIVFSS 397
>TOLB_NITEU (Q82XN9) Protein tolB precursor| Length = 425 Score = 33.9 bits (76), Expect = 0.18 Identities = 26/108 (24%), Positives = 50/108 (46%), Gaps = 2/108 (1%) Frame = +2 Query: 77 NPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPV-SSIRMLRVHGSFPSFSPDAKHF 253 +P +SP G R+ Y F + + Y+Q + + ++ + S P++SPD Sbjct: 196 SPAWSPDGSRIAYTSF-----EKKKPVVYVQTLATRERKAVANFKGSNSAPAWSPDGSKL 250 Query: 254 ALNGDFFKSPGVTILRADGSKRWVLAKQPNL-FYTSWSPTESGVVFTS 394 A+ + ++ ADGS +++ P + S+SP ++FTS Sbjct: 251 AVVLTLHGGSQIYLINADGSGLQRISQSPGIDTEPSFSPDGRWLMFTS 298
>TOLB_BDEBA (Q6MRB2) Protein tolB precursor| Length = 461 Score = 33.9 bits (76), Expect = 0.18 Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 7/91 (7%) Frame = +2 Query: 143 GDSMIPYLQPVRSPVSSIRMLRVHGSFPSFSPDAKHFALNGDFFKSPGVTILRADGSK-- 316 G MI + V I V S PS+SPD K A G + + ++ ADG+ Sbjct: 333 GRPMIYTADAAGNNVKRITFAGVFNSSPSWSPDGKKIAFAGQSDNNFDIFVMNADGTGMI 392 Query: 317 RWVLAKQPNLFYT-----SWSPTESGVVFTS 394 R AK+PN S+SP V++TS Sbjct: 393 RLTSAKKPNGRMASNEDPSFSPDGRFVMYTS 423
>TOLB_HAEIN (P44677) Protein tolB precursor| Length = 427 Score = 33.5 bits (75), Expect = 0.24 Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 2/108 (1%) Frame = +2 Query: 77 NPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSI-RMLRVHGSFPSFSPDAKHF 253 +P +SP G RL Y F Q +Q + S + + H P+FSPD Sbjct: 206 SPAWSPDGQRLAYVSFENKKSQ-----LVVQDLNSGARKVVASFQGHNGAPAFSPDGSRL 260 Query: 254 ALNGDFFKSPGVTILRADGSKRWVLAK-QPNLFYTSWSPTESGVVFTS 394 A + ++ A+G L N +WSP + ++FTS Sbjct: 261 AFASSRDGVLNIYVMGANGGTPTQLTSGAGNNTEPAWSPDGNSILFTS 308
>TOLB_RICCN (Q92IL4) Protein tolB precursor| Length = 444 Score = 33.5 bits (75), Expect = 0.24 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Frame = +2 Query: 224 PSFSPDAKHFALNGDFFKSPGVTILRADGSKRWVLAKQPNLFYT-SWSPTESGVVFTSI 397 PS+SPD K N D P + I+ +DGS ++ + SWSP + FT I Sbjct: 293 PSYSPDGKKIVYNSDRNGVPQLYIMNSDGSDVQRISFGGGSYAAPSWSPRGDYIAFTKI 351
>TOLB_CAUCR (Q9A3H4) Protein tolB precursor| Length = 432 Score = 33.5 bits (75), Expect = 0.24 Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 2/108 (1%) Frame = +2 Query: 74 YNPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSS-IRMLRVHGSFPSFSPDAKH 250 + P FSP G ++ + R G+S I Y+ +RS ++ I + PSFSPD Sbjct: 248 FAPRFSPDGSKVAFSVERN----GNSDI-YVMDLRSRATTRITTDPAIDTSPSFSPDGTK 302 Query: 251 FALNGDFFKSPGVTILRADGSKRWVLAKQPNLFYTS-WSPTESGVVFT 391 N D + ++ DGS ++ + T WSP + FT Sbjct: 303 IVFNSDRGGQAQIYVMNTDGSGVRRISYGGGRYTTPVWSPRGDFIAFT 350
>TOLB_SHEON (Q8EDJ8) Protein tolB precursor| Length = 442 Score = 32.7 bits (73), Expect = 0.41 Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 6/112 (5%) Frame = +2 Query: 77 NPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSIRMLRVHGSFPSFSPDAKHFA 256 +P +SP G RL Y F + Y Q VR+ VSS ++G+ PSFSPD K A Sbjct: 216 SPAWSPDGRRLAYVSFENKKAEIFVQDLYTQ-VRTKVSSFS--GINGA-PSFSPDGKSLA 271 Query: 257 LNGDFFKSPGVTI--LRADGSKR----WVLAKQPNLFYTSWSPTESGVVFTS 394 + P + + + KR + + +P SW P ++FTS Sbjct: 272 VTLSKDGQPEIYVIDIATKAIKRITNHYSIDTEP-----SWYPDGKSLLFTS 318
>TOLB_RHOPA (Q6NAR1) Protein tolB precursor| Length = 444 Score = 32.3 bits (72), Expect = 0.53 Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 2/135 (1%) Frame = +2 Query: 2 IELFDLETEQFTAVTSLLNPELHHYNPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRS 181 + LF++ET Q V + + P FSP G R+ +G G+S + ++ +RS Sbjct: 238 VYLFNVETGQREIVGNFPGMS---FAPRFSPDGQRIIMSLQQG----GNSNL-FVMDLRS 289 Query: 182 PVSS-IRMLRVHGSFPSFSPDAKHFALNGDFFKSPGVTILRADGSKRWVLAKQPNLFYTS 358 ++ + + PS++PD D P + I+ A G + ++ + T Sbjct: 290 KATTRLTDTPAIDTSPSYAPDGSRICFESDRGGKPQIYIMPASGGQAQRISFGDGSYSTP 349 Query: 359 -WSPTESGVVFTSIG 400 WSP + FT G Sbjct: 350 VWSPRGDYIAFTKQG 364
>FA8A1_HUMAN (Q9UBU6) Protein FAM8A1 (Autosomal highly conserved protein)| Length = 413 Score = 32.3 bits (72), Expect = 0.53 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 4/64 (6%) Frame = +2 Query: 59 PELHHYNPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQP----VRSPVSSIRMLRVHGSFP 226 P+L +YNPF+ S G G AG+ + + L P V++ V + + RV + P Sbjct: 167 PQLGYYNPFYFLSPGAAGPDPRTAAGISTPAPVAGLGPRAPHVQASVRATPVTRVGSAAP 226 Query: 227 SFSP 238 S SP Sbjct: 227 SRSP 230
>TOLB_VIBVU (Q8DAM3) Protein tolB precursor| Length = 443 Score = 32.0 bits (71), Expect = 0.70 Identities = 29/109 (26%), Positives = 41/109 (37%), Gaps = 3/109 (2%) Frame = +2 Query: 77 NPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSIRMLRVHGSFPSFSPDAKHFA 256 +P +SP G RL Y F+ G + I L + H P FSPD K A Sbjct: 217 SPAWSPDGRRLAYVSFQN----GQAEIFVLNIYTGEHEKLTSFPRHNGAPRFSPDGKKLA 272 Query: 257 LNGDFFKSPGVTILRADGSKR---WVLAKQPNLFYTSWSPTESGVVFTS 394 + K+ + I D R + + N W P ++FTS Sbjct: 273 I--VLSKTGSLQIYTLDLQTRQLTQITRDRSNNTEPFWHPDGKSLIFTS 319
>TOLB_AGRT5 (Q8U9L4) Protein tolB precursor| Length = 435 Score = 31.6 bits (70), Expect = 0.91 Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 2/132 (1%) Frame = +2 Query: 2 IELFDLETEQFTAVTSLLNPELHHYNPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRS 181 + L LET Q V + ++P FSP G ++ G++ I Y +RS Sbjct: 229 VYLLQLETGQREVVGNFPGMT---FSPRFSPDGQKV----IMSLQQDGNANI-YTMDLRS 280 Query: 182 PVSS-IRMLRVHGSFPSFSPDAKHFALNGDFFKSPGVTILRADGSKRWVLAKQPNLFYTS 358 ++ + + PS+SPD + A D + ++ ADGS + ++ + T Sbjct: 281 RTTTRLTNTAAIDTAPSYSPDGQRVAFESDRGGRQQIYVMNADGSGQQRVSFGDGSYSTP 340 Query: 359 -WSPTESGVVFT 391 WSP + FT Sbjct: 341 VWSPRGDLIAFT 352
>TOLB_WIGBR (Q8D2E2) Protein tolB precursor| Length = 431 Score = 31.6 bits (70), Expect = 0.91 Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 1/107 (0%) Frame = +2 Query: 77 NPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSIRMLRVHGSFPSFSPDAKHFA 256 +P +SP G ++ Y F +G S I + I H P+FSP+ ++ A Sbjct: 205 SPSWSPDGKKIAYVTFE----KGSSEIKIKDIKTGSIKHISSFPYHNGAPAFSPNGENLA 260 Query: 257 LNGDFFKSPGVTILR-ADGSKRWVLAKQPNLFYTSWSPTESGVVFTS 394 S + ++ +G + + N SW P + + +TS Sbjct: 261 FALSKTGSLNLYVMNLKNGYIKQITHGNSNNTEPSWFPDNNSLAYTS 307
>CCD27_HUMAN (Q2M243) Coiled-coil domain-containing protein 27| Length = 656 Score = 31.6 bits (70), Expect = 0.91 Identities = 17/41 (41%), Positives = 19/41 (46%) Frame = -1 Query: 418 RGLEDGADGGEHHXALGGAPRGVEQVGLLGEHPSLGAVGAE 296 RG E GGE L G P GVE G G +G+V E Sbjct: 328 RGKEPDLGGGEEDEGLEGEPDGVEDTGAWGGVSQMGSVHEE 368
>TOLB_PHOPR (Q6LP47) Protein tolB precursor| Length = 449 Score = 31.2 bits (69), Expect = 1.2 Identities = 31/107 (28%), Positives = 42/107 (39%), Gaps = 1/107 (0%) Frame = +2 Query: 77 NPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSIRMLRVHGSFPSFSPDAKHFA 256 +P +SP G +L Y F Q M Y + R V+S H P FSPD K A Sbjct: 223 SPAWSPDGSKLAYVSFENQQAQIYIMDIY-KGTRELVTSYPR---HNGSPRFSPDGKKLA 278 Query: 257 LNGDFFKSPGVTILRADGSK-RWVLAKQPNLFYTSWSPTESGVVFTS 394 L S + I K + + + N W P ++FTS Sbjct: 279 LVLSKTGSLQIYIKDLKTKKLTQITSGRANNTEAFWDPDGKSLIFTS 325
>TOLB_GEOSL (Q74H67) Protein tolB precursor| Length = 432 Score = 30.8 bits (68), Expect = 1.6 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Frame = +2 Query: 224 PSFSPDAKHFALNGDFFKSPGVTILRADGS--KRWVLAKQPNLFYTSWSPTESGVVF 388 P++SPD K A D P V I+ ADGS +R + N+ WSP +V+ Sbjct: 296 PAWSPDGKRIAFVSDRLGKPQVFIMNADGSDVRRLTTSGAYNV-SPRWSPKGDRLVY 351 Score = 30.8 bits (68), Expect = 1.6 Identities = 31/107 (28%), Positives = 43/107 (40%), Gaps = 1/107 (0%) Frame = +2 Query: 77 NPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSIRMLRVHGSFPSFSPDAKHFA 256 NP FSP+G L Y +R G + VSS R + V G ++SPD K A Sbjct: 207 NPDFSPNGRELAYTSYR-RGNPDLFRREIFTGTEAVVSSHRGINVTG---TWSPDGKQLA 262 Query: 257 LNGDFFKSPGVTILRADG-SKRWVLAKQPNLFYTSWSPTESGVVFTS 394 L + + + DG R + Q +WSP + F S Sbjct: 263 LAMSRDGNSEIYAISRDGRDPRRLTTHQAIDVSPAWSPDGKRIAFVS 309 Score = 30.0 bits (66), Expect = 2.7 Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 3/112 (2%) Frame = +2 Query: 41 VTSLLNPELHHYNPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSIRMLRVHGS 220 V L ++ +P +SP G RL Y R G G Q + + + + L GS Sbjct: 327 VRRLTTSGAYNVSPRWSPKGDRLVYCRQEG-GFQ-------IYSIATDGTGDTRLTSEGS 378 Query: 221 --FPSFSPDAKHFALNGDFFKSPGVTILRADGS-KRWVLAKQPNLFYTSWSP 367 P +SPD + + + ++R+DGS + V + + +WSP Sbjct: 379 NEHPRWSPDGRFLTFSSTRDGGEAIYVMRSDGSGQTRVYRSKGKASHPTWSP 430
>TOLB_VIBVY (Q7MJ87) Protein tolB precursor| Length = 449 Score = 30.4 bits (67), Expect = 2.0 Identities = 28/109 (25%), Positives = 41/109 (37%), Gaps = 3/109 (2%) Frame = +2 Query: 77 NPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSIRMLRVHGSFPSFSPDAKHFA 256 +P +SP G +L Y F+ G + I L + H P FSPD K A Sbjct: 223 SPAWSPDGRQLAYVSFQN----GQAEIFVLNIYTGEHEKLTSFPRHNGAPRFSPDGKKLA 278 Query: 257 LNGDFFKSPGVTILRADGSKR---WVLAKQPNLFYTSWSPTESGVVFTS 394 + K+ + I D R + + N W P ++FTS Sbjct: 279 I--VLSKTGSLQIYTLDLQTRQLTQITRDRSNNTEPFWHPDGKSLIFTS 325
>TOLB_RHIME (Q926C2) Protein tolB precursor| Length = 436 Score = 30.0 bits (66), Expect = 2.7 Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 2/132 (1%) Frame = +2 Query: 2 IELFDLETEQFTAVTSLLNPELHHYNPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRS 181 + L LET Q V + + P FSP G R+ +G++ I Y +RS Sbjct: 230 VYLLQLETGQREVVGNFPGMT---FAPRFSPDGQRV----IMSLQQEGNANI-YTMDLRS 281 Query: 182 PVSS-IRMLRVHGSFPSFSPDAKHFALNGDFFKSPGVTILRADGSKRWVLAKQPNLFYTS 358 ++ + + PS+SPD D + ++ ADGS + ++ + T Sbjct: 282 RTTTRLTNTAAIDTSPSYSPDGSRIVFESDRGGKQQLYVMGADGSGQTRISFGDGSYSTP 341 Query: 359 -WSPTESGVVFT 391 WSP + FT Sbjct: 342 VWSPRGDLIAFT 353
>TOLB_VIBCH (Q9KR11) Protein tolB precursor| Length = 450 Score = 30.0 bits (66), Expect = 2.7 Identities = 28/109 (25%), Positives = 42/109 (38%), Gaps = 3/109 (2%) Frame = +2 Query: 77 NPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSIRMLRVHGSFPSFSPDAKHFA 256 +P +SP G L Y F+ G + I + + H P FSPD K A Sbjct: 224 SPAWSPDGQTLAYVSFQN----GQAEIYMMNIYSGKREKLTSFPRHNGAPRFSPDGKTLA 279 Query: 257 LNGDFFKSPGVTILRADGSKR---WVLAKQPNLFYTSWSPTESGVVFTS 394 L K+ + + D + R V + + N W P ++FTS Sbjct: 280 L--VLSKTGNLQVYTMDLATRRLTEVTSGRSNNTEPFWHPDGKSLIFTS 326
>CATB_ASPFU (Q92405) Catalase B precursor (EC 1.11.1.6) (Slow catalase)| (Antigenic catalase) Length = 728 Score = 30.0 bits (66), Expect = 2.7 Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 4/89 (4%) Frame = +2 Query: 143 GDSMIPYLQPVRSPVSSIRMLRVHGSFPSFSPDAKHFALNGDFFKSPGVT----ILRADG 310 G IP SP +S+ + SP + + FF +PG T ++RA Sbjct: 423 GQMFIPLNPHAYSPKTSV----------NGSPKQANQTVGDGFFTAPGRTTSGKLVRAVS 472 Query: 311 SKRWVLAKQPNLFYTSWSPTESGVVFTSI 397 S + QP LFY S P E V +I Sbjct: 473 SSFEDVWSQPRLFYNSLVPAEKQFVIDAI 501
>TOLB_BARHE (Q6G5R6) Protein tolB precursor| Length = 443 Score = 29.6 bits (65), Expect = 3.5 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Frame = +2 Query: 227 SFSPDAKHFALNGDFFKSPGVTILRADGSKRWVLAKQPNLFYTS-WSPTESGVVFT 391 S+SPD + D P + + ADGS ++ + T WSP + FT Sbjct: 304 SYSPDGTKIVFSSDRSGKPQIYTMNADGSNLQRISSNEGSYSTPIWSPRGDYIAFT 359
>TOLB_PASMU (Q9CM71) Protein tolB precursor| Length = 432 Score = 29.6 bits (65), Expect = 3.5 Identities = 22/81 (27%), Positives = 33/81 (40%) Frame = +2 Query: 68 HHYNPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSIRMLRVHGSFPSFSPDAK 247 H+ P FSP G RL + + G I + +S + + + PS+SPD + Sbjct: 250 HNGAPAFSPDGSRLAF----ASSKDGVLNIYVMNLGSGQISQLTSGTGNNTEPSWSPDGQ 305 Query: 248 HFALNGDFFKSPGVTILRADG 310 D SP V + A G Sbjct: 306 TIVFTSDRSGSPQVYQMSASG 326
>TOLB_BARQU (Q6FYQ1) Protein tolB precursor| Length = 440 Score = 29.6 bits (65), Expect = 3.5 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Frame = +2 Query: 227 SFSPDAKHFALNGDFFKSPGVTILRADGSKRWVLAKQPNLFYTS-WSPTESGVVFT 391 S+SPD + D P + + ADGS ++ + T WSP + FT Sbjct: 301 SYSPDGTQIVFSSDRSGKPQIYTMNADGSNLQRISANEGSYSTPIWSPRGDYIAFT 356
>GTI1_SCHPO (O14367) Gluconate transport inducer 1| Length = 720 Score = 29.3 bits (64), Expect = 4.5 Identities = 34/138 (24%), Positives = 60/138 (43%), Gaps = 10/138 (7%) Frame = +2 Query: 20 ETEQFTAVTSLLNPELHH--YNPFFSPSGGRLGYHRFRG--------AGVQGDSMIPYLQ 169 E+E+ + +++L L YNPFFS S + + F+G +GV+ S+ + Sbjct: 348 ESEKISQLSTLEKRTLPSFPYNPFFSSSTAEIDPYHFQGLTLSTSPISGVESSSLSSAIS 407 Query: 170 PVRSPVSSIRMLRVHGSFPSFSPDAKHFALNGDFFKSPGVTILRADGSKRWVLAKQPNLF 349 +S +SS + + + S S + ALN + + P + A S L P Sbjct: 408 RNQSNLSSFQQQQQFSALQSISNN----ALNENIEQPP--IKMAARHSYPNFLQTLPQYM 461 Query: 350 YTSWSPTESGVVFTSIGP 403 ++P SG+ F + P Sbjct: 462 NDVYNP--SGLAFNPVNP 477
>TOLB_RHILO (Q98F84) Protein tolB precursor| Length = 436 Score = 28.9 bits (63), Expect = 5.9 Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 1/107 (0%) Frame = +2 Query: 74 YNPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSIRMLRVHGSFPSFSPDAKHF 253 + P FSP G ++ R G+S I + + + + PS+SPD Sbjct: 252 FAPRFSPDGQKVIMSLLRD---DGNSNIFAMDLRSRSTTRLTNSTAIDTSPSYSPDGSKV 308 Query: 254 ALNGDFFKSPGVTILRADGSKRWVLAKQPNLFYTS-WSPTESGVVFT 391 D + ++ ADGS + ++ ++ T WSP + FT Sbjct: 309 VFTSDRGGRAQIYVMGADGSGQTRISFGDGVYSTPVWSPRGDLIAFT 355
>PURA_GEOSL (Q747F9) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 433 Score = 28.9 bits (63), Expect = 5.9 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 6/31 (19%) Frame = -1 Query: 211 HTEHAD------GAHRAAHRLQVGDHRVALH 137 +TEHAD G + A H L VG+ +V LH Sbjct: 23 YTEHADDVVRYQGGNNAGHTLVVGEEKVVLH 53
>NMR_NEUCR (P23762) Nitrogen metabolic regulation protein (Protein NMR)| Length = 488 Score = 28.9 bits (63), Expect = 5.9 Identities = 17/54 (31%), Positives = 27/54 (50%) Frame = +2 Query: 230 FSPDAKHFALNGDFFKSPGVTILRADGSKRWVLAKQPNLFYTSWSPTESGVVFT 391 F P+AK L+ + P + + DG K+W K+ L Y +P E+ VF+ Sbjct: 265 FHPNAKLPWLDAEHDVGPAILQIFKDGVKKWGGGKRIALAYEMLTPLEACEVFS 318
>DPOL_HBVDR (P03157) P protein [Includes: DNA-directed DNA polymerase (EC| 2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)] Length = 843 Score = 28.9 bits (63), Expect = 5.9 Identities = 21/60 (35%), Positives = 23/60 (38%) Frame = +2 Query: 77 NPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSIRMLRVHGSFPSFSPDAKHFA 256 NP PS GRLG +R L P R + V S PS PD HFA Sbjct: 785 NPADDPSRGRLGLYRPL-----------LLLPFRPTTGRTSLYAVSPSVPSHLPDRVHFA 833
>APT_PSESM (Q884U6) Adenine phosphoribosyltransferase (EC 2.4.2.7) (APRT)| Length = 182 Score = 28.5 bits (62), Expect = 7.7 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +2 Query: 377 GVVFTSIGPIFETPKATVRV 436 GVVF I P+F++PKAT +V Sbjct: 22 GVVFRDITPLFQSPKATRQV 41
>TOLB_FRATT (Q5NGJ7) Protein tolB precursor| Length = 439 Score = 28.5 bits (62), Expect = 7.7 Identities = 30/108 (27%), Positives = 43/108 (39%), Gaps = 2/108 (1%) Frame = +2 Query: 77 NPFFSPSGGRLGYHRFRGAGVQGDSMIPYLQPVRSPVSSIRMLRVHGSFPSFSPDAKHFA 256 NP +PS G + + G + L+ V+ I + S PSFSPD K A Sbjct: 199 NPIATPSWSNDGRYIVYSSYSGGSMGVYTLEIATGKVTRITNYKGINSSPSFSPDGKEIA 258 Query: 257 LNGDFFKSPGVTILRADGSKRWVLAKQPNLFYTS--WSPTESGVVFTS 394 L S I + S + + N T+ +SP +VFTS Sbjct: 259 LALSKGYSDQTNIYIMNLSTKALKRITINGINTAPKFSPNGQSIVFTS 306
>TRI45_MOUSE (Q6PFY8) Tripartite motif protein 45| Length = 580 Score = 28.5 bits (62), Expect = 7.7 Identities = 12/28 (42%), Positives = 13/28 (46%) Frame = -3 Query: 212 AHGACGWSSPGCAQAAGRGSSSRPARPH 129 A ACG + PG G G P RPH Sbjct: 522 ARCACGGTMPGGYLGCGHGHKGHPGRPH 549 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,482,996 Number of Sequences: 219361 Number of extensions: 1129541 Number of successful extensions: 4004 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 3831 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3994 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2618960580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
