| Clone Name | bast48h02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|L21753.1|SCFGLUTRAB Saccharum hybrid cultivar H65-7052 glucose transporter mRNA, complete cds Length = 1726 Score = 232 bits (117), Expect = 4e-58 Identities = 166/181 (91%), Gaps = 1/181 (0%) Strand = Plus / Plus Query: 71 gatggcgggcggcggggtggccgcgctgggcgtgaagaaggagagggcggccgagtacaa 130 |||||||||||||||| |||| |||||||||||||||| |||| | ||||| ||||||| Sbjct: 72 gatggcgggcggcgggatggcggcgctgggcgtgaagacggagcgcgcggcgcagtacaa 131 Query: 131 gggccgcatgacgctggccgtcgccatggcctgcctcgtcgccgccgtcgggggctccat 190 ||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 132 gggccgcatgacgctcgccgtcgccatgacctgcctcgtcgccgccgtcgggggcgccat 191 Query: 191 cttcggctacgacatcgggatctccggaggagtgaccttccatggacccattcctggaga 250 |||||||||||||||||| ||||||||||| |||| | |||||||||||||| ||||||| Sbjct: 192 cttcggctacgacatcggcatctccggaggtgtga-catccatggacccatttctggaga 250 Query: 251 a 251 | Sbjct: 251 a 251
>gb|BT018728.1| Zea mays clone EL01N0519B06.d mRNA sequence Length = 2099 Score = 224 bits (113), Expect = 1e-55 Identities = 165/181 (91%), Gaps = 1/181 (0%) Strand = Plus / Plus Query: 71 gatggcgggcggcggggtggccgcgctgggcgtgaagaaggagagggcggccgagtacaa 130 ||||||||||||||||||||| |||||||||||||||| |||| | ||||| ||||||| Sbjct: 312 gatggcgggcggcggggtggcggcgctgggcgtgaagacggagcgcgcggcgcagtacaa 371 Query: 131 gggccgcatgacgctggccgtcgccatggcctgcctcgtcgccgccgtcgggggctccat 190 ||| ||||||||||| |||||||||| | |||||||||| ||||||||||||||| |||| Sbjct: 372 ggggcgcatgacgctcgccgtcgccacgacctgcctcgtggccgccgtcgggggcgccat 431 Query: 191 cttcggctacgacatcgggatctccggaggagtgaccttccatggacccattcctggaga 250 |||||||||||||||||| ||||||||||| |||| | |||||||||||||||||||||| Sbjct: 432 cttcggctacgacatcggcatctccggaggcgtga-catccatggacccattcctggaga 490 Query: 251 a 251 | Sbjct: 491 a 491
>dbj|AK065807.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013037F14, full insert sequence Length = 1850 Score = 214 bits (108), Expect = 1e-52 Identities = 144/156 (92%) Strand = Plus / Plus Query: 71 gatggcgggcggcggggtggccgcgctgggcgtgaagaaggagagggcggccgagtacaa 130 ||||||||| ||||| ||||| |||||||| |||||||||||| ||||||| |||||||| Sbjct: 98 gatggcgggaggcggcgtggcggcgctgggggtgaagaaggagcgggcggcggagtacaa 157 Query: 131 gggccgcatgacgctggccgtcgccatggcctgcctcgtcgccgccgtcgggggctccat 190 ||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||| |||| Sbjct: 158 gggccgcatgacgctcgccgtcggcatggcctgcctcgtcgccgccgtcggcggcgccat 217 Query: 191 cttcggctacgacatcgggatctccggaggagtgac 226 |||||||||||||||||| |||||||| |||||||| Sbjct: 218 cttcggctacgacatcggcatctccgggggagtgac 253
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 204 bits (103), Expect = 1e-49 Identities = 136/147 (92%) Strand = Plus / Plus Query: 71 gatggcgggcggcggggtggccgcgctgggcgtgaagaaggagagggcggccgagtacaa 130 ||||||||| ||||| ||||| |||||||| |||||||||||| ||||||| |||||||| Sbjct: 14832585 gatggcgggaggcggcgtggcggcgctgggggtgaagaaggagcgggcggcggagtacaa 14832644 Query: 131 gggccgcatgacgctggccgtcgccatggcctgcctcgtcgccgccgtcgggggctccat 190 ||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||| |||| Sbjct: 14832645 gggccgcatgacgctcgccgtcggcatggcctgcctcgtcgccgccgtcggcggcgccat 14832704 Query: 191 cttcggctacgacatcgggatctccgg 217 |||||||||||||||||| |||||||| Sbjct: 14832705 cttcggctacgacatcggcatctccgg 14832731 Score = 56.0 bits (28), Expect = 6e-05 Identities = 77/92 (83%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 154 ccatggcctgcctcgtcgccgccgtcgggggctccatcttcggctacgacatcgggatct 213 ||||||| |||||||| || ||| ||| ||| ||||||||||||||||||||| ||| Sbjct: 7164835 ccatggcgtgcctcgtggcggccaccggcggcctcatcttcggctacgacatcggcgtct 7164894 Query: 214 ccggaggagtgaccttccatggacccattcct 245 |||| || || ||| ||||||||||| ||||| Sbjct: 7164895 ccggcggcgtcacc-tccatggacccgttcct 7164925 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 gggcgtgaagaaggagaggg 117 |||||||||||||||||||| Sbjct: 2070853 gggcgtgaagaaggagaggg 2070872
>dbj|AP005636.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0707C02 Length = 163609 Score = 204 bits (103), Expect = 1e-49 Identities = 136/147 (92%) Strand = Plus / Plus Query: 71 gatggcgggcggcggggtggccgcgctgggcgtgaagaaggagagggcggccgagtacaa 130 ||||||||| ||||| ||||| |||||||| |||||||||||| ||||||| |||||||| Sbjct: 117974 gatggcgggaggcggcgtggcggcgctgggggtgaagaaggagcgggcggcggagtacaa 118033 Query: 131 gggccgcatgacgctggccgtcgccatggcctgcctcgtcgccgccgtcgggggctccat 190 ||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||| |||| Sbjct: 118034 gggccgcatgacgctcgccgtcggcatggcctgcctcgtcgccgccgtcggcggcgccat 118093 Query: 191 cttcggctacgacatcgggatctccgg 217 |||||||||||||||||| |||||||| Sbjct: 118094 cttcggctacgacatcggcatctccgg 118120
>dbj|AP005784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0014G10 Length = 164147 Score = 204 bits (103), Expect = 1e-49 Identities = 136/147 (92%) Strand = Plus / Plus Query: 71 gatggcgggcggcggggtggccgcgctgggcgtgaagaaggagagggcggccgagtacaa 130 ||||||||| ||||| ||||| |||||||| |||||||||||| ||||||| |||||||| Sbjct: 40924 gatggcgggaggcggcgtggcggcgctgggggtgaagaaggagcgggcggcggagtacaa 40983 Query: 131 gggccgcatgacgctggccgtcgccatggcctgcctcgtcgccgccgtcgggggctccat 190 ||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||| |||| Sbjct: 40984 gggccgcatgacgctcgccgtcggcatggcctgcctcgtcgccgccgtcggcggcgccat 41043 Query: 191 cttcggctacgacatcgggatctccgg 217 |||||||||||||||||| |||||||| Sbjct: 41044 cttcggctacgacatcggcatctccgg 41070
>gb|AY822464.1| Oryza sativa (japonica cultivar-group) monosaccharide transporter 8 (MST8) mRNA, complete cds Length = 1542 Score = 63.9 bits (32), Expect = 2e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 159 gcctgcctcgtcgccgccgtcgggggctccatcttcggctacgacatcgggatctccgga 218 ||||||||||||||| || ||| ||| ||||||||||||||||||||| |||||||| Sbjct: 79 gcctgcctcgtcgcctcctccggcggcctcatcttcggctacgacatcggcatctccggc 138 Query: 219 ggagtgac 226 || ||||| Sbjct: 139 ggcgtgac 146
>ref|XM_464184.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1754 Score = 63.9 bits (32), Expect = 2e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 161 ctgcctcgtcgccgccgtcgggggctccatcttcggctacgacatcgg 208 ||||||| ||||| ||||||| |||| ||||||||||||||||||||| Sbjct: 195 ctgcctcatcgcctccgtcggcggctgcatcttcggctacgacatcgg 242
>ref|XM_506721.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ9003_G05.6 mRNA Length = 2040 Score = 63.9 bits (32), Expect = 2e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 161 ctgcctcgtcgccgccgtcgggggctccatcttcggctacgacatcgg 208 ||||||| ||||| ||||||| |||| ||||||||||||||||||||| Sbjct: 196 ctgcctcatcgcctccgtcggcggctgcatcttcggctacgacatcgg 243
>ref|NM_193582.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1539 Score = 63.9 bits (32), Expect = 2e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 159 gcctgcctcgtcgccgccgtcgggggctccatcttcggctacgacatcgggatctccgga 218 ||||||||||||||| || ||| ||| ||||||||||||||||||||| |||||||| Sbjct: 73 gcctgcctcgtcgcctcctccggcggcctcatcttcggctacgacatcggcatctccggt 132 Query: 219 ggagtgac 226 || ||||| Sbjct: 133 ggcgtgac 140
>ref|NM_193581.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1542 Score = 63.9 bits (32), Expect = 2e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 159 gcctgcctcgtcgccgccgtcgggggctccatcttcggctacgacatcgggatctccgga 218 ||||||||||||||| || ||| ||| ||||||||||||||||||||| |||||||| Sbjct: 79 gcctgcctcgtcgcctcctccggcggcctcatcttcggctacgacatcggcatctccggc 138 Query: 219 ggagtgac 226 || ||||| Sbjct: 139 ggcgtgac 146
>gb|AY643749.1| Oryza sativa (japonica cultivar-group) monosaccharide transporter 7 (MST7) mRNA, complete cds Length = 1539 Score = 63.9 bits (32), Expect = 2e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 159 gcctgcctcgtcgccgccgtcgggggctccatcttcggctacgacatcgggatctccgga 218 ||||||||||||||| || ||| ||| ||||||||||||||||||||| |||||||| Sbjct: 73 gcctgcctcgtcgcctcctccggcggcctcatcttcggctacgacatcggcatctccggt 132 Query: 219 ggagtgac 226 || ||||| Sbjct: 133 ggcgtgac 140
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 63.9 bits (32), Expect = 2e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 161 ctgcctcgtcgccgccgtcgggggctccatcttcggctacgacatcgg 208 ||||||| ||||| ||||||| |||| ||||||||||||||||||||| Sbjct: 3266203 ctgcctcatcgcctccgtcggcggctgcatcttcggctacgacatcgg 3266250 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ctgcctcgtcgccgccgtcg 180 |||||||||||||||||||| Sbjct: 19481951 ctgcctcgtcgccgccgtcg 19481970
>dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1103G11 Length = 182931 Score = 63.9 bits (32), Expect = 2e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 161 ctgcctcgtcgccgccgtcgggggctccatcttcggctacgacatcgg 208 ||||||| ||||| ||||||| |||| ||||||||||||||||||||| Sbjct: 138390 ctgcctcatcgcctccgtcggcggctgcatcttcggctacgacatcgg 138437
>dbj|AP004126.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ9003_G05 Length = 141860 Score = 63.9 bits (32), Expect = 2e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 161 ctgcctcgtcgccgccgtcgggggctccatcttcggctacgacatcgg 208 ||||||| ||||| ||||||| |||| ||||||||||||||||||||| Sbjct: 15063 ctgcctcatcgcctccgtcggcggctgcatcttcggctacgacatcgg 15110
>dbj|AK119771.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-F02, full insert sequence Length = 1754 Score = 63.9 bits (32), Expect = 2e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 161 ctgcctcgtcgccgccgtcgggggctccatcttcggctacgacatcgg 208 ||||||| ||||| ||||||| |||| ||||||||||||||||||||| Sbjct: 195 ctgcctcatcgcctccgtcggcggctgcatcttcggctacgacatcgg 242
>dbj|AK070615.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063D11, full insert sequence Length = 2040 Score = 63.9 bits (32), Expect = 2e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 161 ctgcctcgtcgccgccgtcgggggctccatcttcggctacgacatcgg 208 ||||||| ||||| ||||||| |||| ||||||||||||||||||||| Sbjct: 196 ctgcctcatcgcctccgtcggcggctgcatcttcggctacgacatcgg 243
>dbj|AK069327.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023015H11, full insert sequence Length = 1702 Score = 63.9 bits (32), Expect = 2e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 159 gcctgcctcgtcgccgccgtcgggggctccatcttcggctacgacatcgggatctccgga 218 ||||||||||||||| || ||| ||| ||||||||||||||||||||| |||||||| Sbjct: 165 gcctgcctcgtcgcctcctccggcggcctcatcttcggctacgacatcggcatctccggc 224 Query: 219 ggagtgac 226 || ||||| Sbjct: 225 ggcgtgac 232
>ref|XM_472711.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1554 Score = 61.9 bits (31), Expect = 9e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 188 catcttcggctacgacatcgggatctccggaggagtgac 226 ||||||||||||||||||||| |||||||| |||||||| Sbjct: 111 catcttcggctacgacatcggcatctccgggggagtgac 149
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 61.9 bits (31), Expect = 9e-07 Identities = 52/59 (88%) Strand = Plus / Minus Query: 159 gcctgcctcgtcgccgccgtcgggggctccatcttcggctacgacatcgggatctccgg 217 ||||||||||||||| || ||| ||| ||||||||||||||||||||| |||||||| Sbjct: 21721901 gcctgcctcgtcgcctcctccggcggcctcatcttcggctacgacatcggcatctccgg 21721843 Score = 61.9 bits (31), Expect = 9e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 159 gcctgcctcgtcgccgccgtcgggggctccatcttcggctacgacatcgggatctccgg 217 ||||||||||||||| || ||| ||| ||||||||||||||||||||| |||||||| Sbjct: 21716134 gcctgcctcgtcgcctcctccggcggcctcatcttcggctacgacatcggcatctccgg 21716192 Score = 42.1 bits (21), Expect = 0.83 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 cgtgccgagctctcctcctcc 27 ||||||||||||||||||||| Sbjct: 2712311 cgtgccgagctctcctcctcc 2712331
>dbj|AP003141.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0002B05 Length = 141275 Score = 61.9 bits (31), Expect = 9e-07 Identities = 52/59 (88%) Strand = Plus / Minus Query: 159 gcctgcctcgtcgccgccgtcgggggctccatcttcggctacgacatcgggatctccgg 217 ||||||||||||||| || ||| ||| ||||||||||||||||||||| |||||||| Sbjct: 73952 gcctgcctcgtcgcctcctccggcggcctcatcttcggctacgacatcggcatctccgg 73894 Score = 61.9 bits (31), Expect = 9e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 159 gcctgcctcgtcgccgccgtcgggggctccatcttcggctacgacatcgggatctccgg 217 ||||||||||||||| || ||| ||| ||||||||||||||||||||| |||||||| Sbjct: 68185 gcctgcctcgtcgcctcctccggcggcctcatcttcggctacgacatcggcatctccgg 68243
>dbj|AK072059.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111I22, full insert sequence Length = 1847 Score = 61.9 bits (31), Expect = 9e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 188 catcttcggctacgacatcgggatctccggaggagtgac 226 ||||||||||||||||||||| |||||||| |||||||| Sbjct: 204 catcttcggctacgacatcggcatctccgggggagtgac 242
>ref|XM_480356.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1743 Score = 60.0 bits (30), Expect = 4e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 160 cctgcctcgtcgccgccgtcgggggctccatcttcggctacgacatcgggatctccgg 217 |||||||||||||| || ||| ||| ||||||||||||||||||||| |||||||| Sbjct: 150 cctgcctcgtcgcctcctccggcggcctcatcttcggctacgacatcggcatctccgg 207
>ref|XM_507147.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1120_C08.22 mRNA Length = 2059 Score = 60.0 bits (30), Expect = 4e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 160 cctgcctcgtcgccgccgtcgggggctccatcttcggctacgacatcgggatctccgg 217 |||||||||||||| || ||| ||| ||||||||||||||||||||| |||||||| Sbjct: 150 cctgcctcgtcgcctcctccggcggcctcatcttcggctacgacatcggcatctccgg 207
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 60.0 bits (30), Expect = 4e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 160 cctgcctcgtcgccgccgtcgggggctccatcttcggctacgacatcgggatctccgg 217 |||||||||||||| || ||| ||| ||||||||||||||||||||| |||||||| Sbjct: 4575236 cctgcctcgtcgcctcctccggcggcctcatcttcggctacgacatcggcatctccgg 4575293
>dbj|AP003878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1120_C08 Length = 150300 Score = 60.0 bits (30), Expect = 4e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 160 cctgcctcgtcgccgccgtcgggggctccatcttcggctacgacatcgggatctccgg 217 |||||||||||||| || ||| ||| ||||||||||||||||||||| |||||||| Sbjct: 99084 cctgcctcgtcgcctcctccggcggcctcatcttcggctacgacatcggcatctccgg 99141
>dbj|AK072269.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008O22, full insert sequence Length = 1743 Score = 60.0 bits (30), Expect = 4e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 160 cctgcctcgtcgccgccgtcgggggctccatcttcggctacgacatcgggatctccgg 217 |||||||||||||| || ||| ||| ||||||||||||||||||||| |||||||| Sbjct: 150 cctgcctcgtcgcctcctccggcggcctcatcttcggctacgacatcggcatctccgg 207
>dbj|AK070877.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065C06, full insert sequence Length = 2059 Score = 60.0 bits (30), Expect = 4e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 160 cctgcctcgtcgccgccgtcgggggctccatcttcggctacgacatcgggatctccgg 217 |||||||||||||| || ||| ||| ||||||||||||||||||||| |||||||| Sbjct: 150 cctgcctcgtcgcctcctccggcggcctcatcttcggctacgacatcggcatctccgg 207
>dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1381_H04 Length = 130961 Score = 56.0 bits (28), Expect = 6e-05 Identities = 77/92 (83%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 154 ccatggcctgcctcgtcgccgccgtcgggggctccatcttcggctacgacatcgggatct 213 ||||||| |||||||| || ||| ||| ||| ||||||||||||||||||||| ||| Sbjct: 16940 ccatggcgtgcctcgtggcggccaccggcggcctcatcttcggctacgacatcggcgtct 16999 Query: 214 ccggaggagtgaccttccatggacccattcct 245 |||| || || ||| ||||||||||| ||||| Sbjct: 17000 ccggcggcgtcacc-tccatggacccgttcct 17030
>dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0592C05 Length = 150478 Score = 56.0 bits (28), Expect = 6e-05 Identities = 77/92 (83%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 154 ccatggcctgcctcgtcgccgccgtcgggggctccatcttcggctacgacatcgggatct 213 ||||||| |||||||| || ||| ||| ||| ||||||||||||||||||||| ||| Sbjct: 116914 ccatggcgtgcctcgtggcggccaccggcggcctcatcttcggctacgacatcggcgtct 116973 Query: 214 ccggaggagtgaccttccatggacccattcct 245 |||| || || ||| ||||||||||| ||||| Sbjct: 116974 ccggcggcgtcacc-tccatggacccgttcct 117004
>ref|NM_118268.1| Arabidopsis thaliana carbohydrate transporter/ sugar porter AT4G21480 mRNA, complete cds Length = 1527 Score = 54.0 bits (27), Expect = 2e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 188 catcttcggctacgacatcgggatctccggaggagtgac 226 ||||||||| ||||||||||| |||||||| |||||||| Sbjct: 105 catcttcggttacgacatcggtatctccggtggagtgac 143
>emb|AJ344333.1|ATH344333 Arabidopsis thaliana mRNA for STP12 protein Length = 1527 Score = 54.0 bits (27), Expect = 2e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 188 catcttcggctacgacatcgggatctccggaggagtgac 226 ||||||||| ||||||||||| |||||||| |||||||| Sbjct: 105 catcttcggttacgacatcggtatctccggtggagtgac 143
>emb|AL731584.3|OSJN00224 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006M15, complete sequence Length = 143109 Score = 52.0 bits (26), Expect = 9e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 188 catcttcggctacgacatcgggatctccgg 217 ||||||||||||||||||||| |||||||| Sbjct: 94709 catcttcggctacgacatcggcatctccgg 94738 Score = 52.0 bits (26), Expect = 9e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 188 catcttcggctacgacatcgggatctccgg 217 ||||||||||||||||||||| |||||||| Sbjct: 56237 catcttcggctacgacatcggcatctccgg 56266
>emb|AL662937.4|OSJN00140 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027G07, complete sequence Length = 179021 Score = 52.0 bits (26), Expect = 9e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 188 catcttcggctacgacatcgggatctccgg 217 ||||||||||||||||||||| |||||||| Sbjct: 161140 catcttcggctacgacatcggcatctccgg 161169
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 52.0 bits (26), Expect = 9e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 188 catcttcggctacgacatcgggatctccgg 217 ||||||||||||||||||||| |||||||| Sbjct: 22757513 catcttcggctacgacatcggcatctccgg 22757542 Score = 52.0 bits (26), Expect = 9e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 188 catcttcggctacgacatcgggatctccgg 217 ||||||||||||||||||||| |||||||| Sbjct: 22719040 catcttcggctacgacatcggcatctccgg 22719069
>ref|XM_493721.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1563 Score = 50.1 bits (25), Expect = 0.003 Identities = 25/25 (100%) Strand = Plus / Plus Query: 188 catcttcggctacgacatcgggatc 212 ||||||||||||||||||||||||| Sbjct: 120 catcttcggctacgacatcgggatc 144
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 50.1 bits (25), Expect = 0.003 Identities = 25/25 (100%) Strand = Plus / Minus Query: 188 catcttcggctacgacatcgggatc 212 ||||||||||||||||||||||||| Sbjct: 2155589 catcttcggctacgacatcgggatc 2155565 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ctgcctcgtcgccgccgtcg 180 |||||||||||||||||||| Sbjct: 24172009 ctgcctcgtcgccgccgtcg 24171990
>dbj|AP000399.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0535G04 Length = 154180 Score = 50.1 bits (25), Expect = 0.003 Identities = 25/25 (100%) Strand = Plus / Minus Query: 188 catcttcggctacgacatcgggatc 212 ||||||||||||||||||||||||| Sbjct: 15046 catcttcggctacgacatcgggatc 15022
>ref|NM_197747.1| Oryza sativa (japonica cultivar-group) putative monosaccharide transporter (OSJNBa0042H09.10), mRNA Length = 1557 Score = 46.1 bits (23), Expect = 0.053 Identities = 35/39 (89%) Strand = Plus / Plus Query: 190 tcttcggctacgacatcgggatctccggaggagtgacct 228 |||||||||||||| |||| |||||||| || ||||||| Sbjct: 125 tcttcggctacgacctcggcatctccggtggtgtgacct 163
>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16 Length = 347137 Score = 46.1 bits (23), Expect = 0.053 Identities = 26/27 (96%) Strand = Plus / Minus Query: 73 tggcgggcggcggggtggccgcgctgg 99 ||||||||||||| ||||||||||||| Sbjct: 56389 tggcgggcggcggcgtggccgcgctgg 56363
>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14 Length = 346301 Score = 46.1 bits (23), Expect = 0.053 Identities = 26/27 (96%) Strand = Plus / Minus Query: 73 tggcgggcggcggggtggccgcgctgg 99 ||||||||||||| ||||||||||||| Sbjct: 339149 tggcgggcggcggcgtggccgcgctgg 339123
>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12 Length = 343243 Score = 46.1 bits (23), Expect = 0.053 Identities = 26/27 (96%) Strand = Plus / Plus Query: 73 tggcgggcggcggggtggccgcgctgg 99 ||||||||||||| ||||||||||||| Sbjct: 139545 tggcgggcggcggcgtggccgcgctgg 139571
>dbj|AK068343.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013148F21, full insert sequence Length = 1927 Score = 46.1 bits (23), Expect = 0.053 Identities = 35/39 (89%) Strand = Plus / Plus Query: 190 tcttcggctacgacatcgggatctccggaggagtgacct 228 |||||||||||||| |||| |||||||| || ||||||| Sbjct: 299 tcttcggctacgacctcggcatctccggtggtgtgacct 337
>ref|NM_125545.3| Arabidopsis thaliana carbohydrate transporter/ sugar porter AT5G61520 mRNA, complete cds Length = 1975 Score = 44.1 bits (22), Expect = 0.21 Identities = 22/22 (100%) Strand = Plus / Plus Query: 188 catcttcggctacgacatcggg 209 |||||||||||||||||||||| Sbjct: 206 catcttcggctacgacatcggg 227
>emb|AL161555.2|ATCHRIV55 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 55 Length = 194916 Score = 44.1 bits (22), Expect = 0.21 Identities = 28/30 (93%) Strand = Plus / Minus Query: 188 catcttcggctacgacatcgggatctccgg 217 ||||||||| ||||||||||| |||||||| Sbjct: 53046 catcttcggttacgacatcggtatctccgg 53017
>emb|AL022603.1|ATF18E5 Arabidopsis thaliana DNA chromosome 4, BAC clone F18E5 (ESSAII project) Length = 95266 Score = 44.1 bits (22), Expect = 0.21 Identities = 28/30 (93%) Strand = Plus / Minus Query: 188 catcttcggctacgacatcgggatctccgg 217 ||||||||| ||||||||||| |||||||| Sbjct: 40038 catcttcggttacgacatcggtatctccgg 40009
>gb|AY128303.1| Arabidopsis thaliana AT5g61520/k11j9_40 mRNA, complete cds Length = 2028 Score = 44.1 bits (22), Expect = 0.21 Identities = 22/22 (100%) Strand = Plus / Plus Query: 188 catcttcggctacgacatcggg 209 |||||||||||||||||||||| Sbjct: 143 catcttcggctacgacatcggg 164
>emb|BX829776.1|CNS0A1JO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB36ZC06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1621 Score = 44.1 bits (22), Expect = 0.21 Identities = 22/22 (100%) Strand = Plus / Plus Query: 188 catcttcggctacgacatcggg 209 |||||||||||||||||||||| Sbjct: 206 catcttcggctacgacatcggg 227
>emb|BX830816.1|CNS0A0OR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS26ZE06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1689 Score = 44.1 bits (22), Expect = 0.21 Identities = 22/22 (100%) Strand = Plus / Plus Query: 188 catcttcggctacgacatcggg 209 |||||||||||||||||||||| Sbjct: 146 catcttcggctacgacatcggg 167
>dbj|AB012239.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K11J9 Length = 69142 Score = 44.1 bits (22), Expect = 0.21 Identities = 22/22 (100%) Strand = Plus / Minus Query: 188 catcttcggctacgacatcggg 209 |||||||||||||||||||||| Sbjct: 15643 catcttcggctacgacatcggg 15622
>emb|AJ002399.1|ATAJ2399 Arabidopsis thaliana mRNA for monosaccharide transporter STP3 Length = 1915 Score = 44.1 bits (22), Expect = 0.21 Identities = 22/22 (100%) Strand = Plus / Plus Query: 188 catcttcggctacgacatcggg 209 |||||||||||||||||||||| Sbjct: 130 catcttcggctacgacatcggg 151
>ref|NM_020655.2| Homo sapiens junctophilin 3 (JPH3), mRNA Length = 3997 Score = 42.1 bits (21), Expect = 0.83 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 gcgggcggcggggtggccgcg 95 ||||||||||||||||||||| Sbjct: 1726 gcgggcggcggggtggccgcg 1706
>gb|AC136221.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J17, complete sequence Length = 141598 Score = 42.1 bits (21), Expect = 0.83 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 cctcggcccttgctcgagctc 60 ||||||||||||||||||||| Sbjct: 14604 cctcggcccttgctcgagctc 14624
>gb|AF223646.1| Uncultured bacterium plasmid pAH115 esterase gene, complete cds Length = 2142 Score = 42.1 bits (21), Expect = 0.83 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 ctgcctcgtcgccgccgtcgg 181 ||||||||||||||||||||| Sbjct: 1837 ctgcctcgtcgccgccgtcgg 1817
>gb|BC036533.2| Homo sapiens junctophilin 3, mRNA (cDNA clone MGC:33713 IMAGE:5264853), complete cds Length = 3987 Score = 42.1 bits (21), Expect = 0.83 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 gcgggcggcggggtggccgcg 95 ||||||||||||||||||||| Sbjct: 1714 gcgggcggcggggtggccgcg 1694
>gb|AC022098.9| Homo sapiens chromosome 19 clone CTB-55O6, complete sequence Length = 237931 Score = 42.1 bits (21), Expect = 0.83 Identities = 24/25 (96%) Strand = Plus / Minus Query: 63 ggagggaggatggcgggcggcgggg 87 |||||||||| |||||||||||||| Sbjct: 128257 ggagggaggaaggcgggcggcgggg 128233
>dbj|AK126663.1| Homo sapiens cDNA FLJ44707 fis, clone BRACE3018083, highly similar to Homo sapiens junctophilin 3 (JPH3) Length = 4023 Score = 42.1 bits (21), Expect = 0.83 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 gcgggcggcggggtggccgcg 95 ||||||||||||||||||||| Sbjct: 1766 gcgggcggcggggtggccgcg 1746
>gb|AC182634.3| Gallus gallus BAC clone CH261-141O9 from chromosome 1, complete sequence Length = 187635 Score = 42.1 bits (21), Expect = 0.83 Identities = 30/33 (90%) Strand = Plus / Minus Query: 172 ccgccgtcgggggctccatcttcggctacgaca 204 ||||| ||||||||| | ||||||||||||||| Sbjct: 90632 ccgccctcgggggcttcctcttcggctacgaca 90600
>dbj|AK055486.1| Homo sapiens cDNA FLJ30924 fis, clone FEBRA2006521, highly similar to Homo sapiens JP3 mRNA for junctophilin type3 Length = 2811 Score = 42.1 bits (21), Expect = 0.83 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 gcgggcggcggggtggccgcg 95 ||||||||||||||||||||| Sbjct: 543 gcgggcggcggggtggccgcg 523
>gb|AC010536.8| Homo sapiens chromosome 16 clone RP11-278A23, complete sequence Length = 208236 Score = 42.1 bits (21), Expect = 0.83 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 gcgggcggcggggtggccgcg 95 ||||||||||||||||||||| Sbjct: 83083 gcgggcggcggggtggccgcg 83103
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 0.83 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 cctcggcccttgctcgagctc 60 ||||||||||||||||||||| Sbjct: 16374167 cctcggcccttgctcgagctc 16374187
>dbj|AB042640.2| Homo sapiens JP3 gene for junctophilin type3, partial cds Length = 2474 Score = 42.1 bits (21), Expect = 0.83 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 gcgggcggcggggtggccgcg 95 ||||||||||||||||||||| Sbjct: 1507 gcgggcggcggggtggccgcg 1487
>dbj|AP002540.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0434B04 Length = 167029 Score = 42.1 bits (21), Expect = 0.83 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 cgtgccgagctctcctcctcc 27 ||||||||||||||||||||| Sbjct: 162086 cgtgccgagctctcctcctcc 162106
>dbj|AP002522.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0009G03 Length = 163526 Score = 42.1 bits (21), Expect = 0.83 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 cgtgccgagctctcctcctcc 27 ||||||||||||||||||||| Sbjct: 17988 cgtgccgagctctcctcctcc 18008
>dbj|AK071085.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078H07, full insert sequence Length = 2021 Score = 42.1 bits (21), Expect = 0.83 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 cgtgccgagctctcctcctcc 27 ||||||||||||||||||||| Sbjct: 13 cgtgccgagctctcctcctcc 33
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 0.83 Identities = 24/25 (96%) Strand = Plus / Minus Query: 80 cggcggggtggccgcgctgggcgtg 104 ||||| ||||||||||||||||||| Sbjct: 1329658 cggcgtggtggccgcgctgggcgtg 1329634
>gb|AC145949.3| Gallus gallus BAC clone CH261-29A22 from chromosome unknown, complete sequence Length = 172543 Score = 42.1 bits (21), Expect = 0.83 Identities = 30/33 (90%) Strand = Plus / Minus Query: 172 ccgccgtcgggggctccatcttcggctacgaca 204 ||||| ||||||||| | ||||||||||||||| Sbjct: 90434 ccgccctcgggggcttcctcttcggctacgaca 90402
>dbj|AB042636.1| Homo sapiens JP3 mRNA for junctophilin type3, complete cds Length = 2507 Score = 42.1 bits (21), Expect = 0.83 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 gcgggcggcggggtggccgcg 95 ||||||||||||||||||||| Sbjct: 1641 gcgggcggcggggtggccgcg 1621
>ref|XM_509171.1| PREDICTED: Pan troglodytes similar to PI 3-kinase enhancer long isoform (LOC452023), mRNA Length = 3660 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 ggcggggtggccgcgctgggcgtg 104 |||| ||||||||||||||||||| Sbjct: 3575 ggcgtggtggccgcgctgggcgtg 3552
>ref|XM_466077.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1542 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ctgcctcgtcgccgccgtcg 180 |||||||||||||||||||| Sbjct: 805 ctgcctcgtcgccgccgtcg 786
>ref|XM_477077.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1548 Score = 40.1 bits (20), Expect = 3.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 192 ttcggctacgacatcgggatctccggaggagtgacc 227 |||||||||||| |||| |||||||| || |||||| Sbjct: 124 ttcggctacgacgtcggcatctccggcggcgtgacc 159
>ref|NM_186227.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1575 Score = 40.1 bits (20), Expect = 3.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 190 tcttcggctacgacatcgggatctccgg 217 ||||||||||||||||||| ||||||| Sbjct: 116 tcttcggctacgacatcggcgtctccgg 143
>ref|XM_369808.1| Magnaporthe grisea 70-15 hypothetical protein (MG06323.4) partial mRNA Length = 1152 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 cgctggccgtcgccatggcc 161 |||||||||||||||||||| Sbjct: 434 cgctggccgtcgccatggcc 453
>gb|BC028020.1| Homo sapiens centaurin, gamma 1, mRNA (cDNA clone MGC:39939 IMAGE:5218187), complete cds Length = 2834 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 ggcggggtggccgcgctgggcgtg 104 |||| ||||||||||||||||||| Sbjct: 2483 ggcgtggtggccgcgctgggcgtg 2460
>gb|AY293847.1| Pachyrhizus tuberosus small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence Length = 655 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cggcctcggcccttgctcga 56 |||||||||||||||||||| Sbjct: 121 cggcctcggcccttgctcga 140
>gb|AY293846.1| Pachyrhizus erosus small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence Length = 660 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cggcctcggcccttgctcga 56 |||||||||||||||||||| Sbjct: 121 cggcctcggcccttgctcga 140
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 catcttcggctacgacatcg 207 |||||||||||||||||||| Sbjct: 801392 catcttcggctacgacatcg 801373
>gb|AC123950.3| Mus musculus BAC clone RP23-162I9 from chromosome 18, complete sequence Length = 181095 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 ctcctcctcccccttgcctc 37 |||||||||||||||||||| Sbjct: 67330 ctcctcctcccccttgcctc 67349
>gb|AC099710.8| Mus musculus, clone RP23-366C6, complete sequence Length = 225122 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ctcctcctcccccttgcctc 37 |||||||||||||||||||| Sbjct: 200125 ctcctcctcccccttgcctc 200106
>gb|AC116119.12| Mus musculus chromosome 12, clone RP23-76D19, complete sequence Length = 264410 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ctcctcctcccccttgcctc 37 |||||||||||||||||||| Sbjct: 81814 ctcctcctcccccttgcctc 81795
>gb|AY128689.1| Homo sapiens PI 3-kinase enhancer long isoform mRNA, complete cds Length = 3579 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 ggcggggtggccgcgctgggcgtg 104 |||| ||||||||||||||||||| Sbjct: 3494 ggcgtggtggccgcgctgggcgtg 3471
>gb|AC122815.3| Mus musculus BAC clone RP23-234O3 from chromosome 2, complete sequence Length = 176452 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ctcctcctcccccttgcctc 37 |||||||||||||||||||| Sbjct: 77750 ctcctcctcccccttgcctc 77731
>gb|AC025165.27| Homo sapiens 12 BAC RP11-571M6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 211544 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 ggcggggtggccgcgctgggcgtg 104 |||| ||||||||||||||||||| Sbjct: 120556 ggcgtggtggccgcgctgggcgtg 120579
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cggggtggccgcgctgggcg 102 |||||||||||||||||||| Sbjct: 2858739 cggggtggccgcgctgggcg 2858758
>gb|AC161410.3| Mus musculus chromosome 8, clone RP23-399J5, complete sequence Length = 196119 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gagctctcctcctccccctt 32 |||||||||||||||||||| Sbjct: 97801 gagctctcctcctccccctt 97782
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16 Length = 348706 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 ggcgggcggcggggtggccg 93 |||||||||||||||||||| Sbjct: 224492 ggcgggcggcggggtggccg 224473
>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14 Length = 347894 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 ggcgggcggcggggtggccg 93 |||||||||||||||||||| Sbjct: 78431 ggcgggcggcggggtggccg 78450
>gb|AC154740.2| Mus musculus BAC clone RP23-118I16 from chromosome 9, complete sequence Length = 222313 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 ctcctcctcccccttgcctc 37 |||||||||||||||||||| Sbjct: 77425 ctcctcctcccccttgcctc 77444
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 40.1 bits (20), Expect = 3.3 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 57 gctctcggagggaggatggcgg-gcggcgggg 87 ||||||||||||||| |||||| ||||||||| Sbjct: 150053 gctctcggagggaggctggcggcgcggcgggg 150022
>emb|AL021127.2|MMCMX137 Mus musculus chromosome X contigA; putative Magea9 gene, Caltractin, NAD(P) steroid dehydrogenase and Zinc finger protein 185 Length = 195025 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ctcctcctcccccttgcctc 37 |||||||||||||||||||| Sbjct: 24916 ctcctcctcccccttgcctc 24897
>dbj|AK122827.1| Homo sapiens cDNA FLJ16430 fis, clone BRACE3009044, highly similar to Rattus norvegicus nuclear GTPase PIKE mRNA Length = 2893 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 ggcggggtggccgcgctgggcgtg 104 |||| ||||||||||||||||||| Sbjct: 2577 ggcgtggtggccgcgctgggcgtg 2554
>dbj|AK136232.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420487I23 product:unclassifiable, full insert sequence Length = 2992 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ctcctcctcccccttgcctc 37 |||||||||||||||||||| Sbjct: 758 ctcctcctcccccttgcctc 739
>gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 genomic sequence, complete sequence Length = 144191 Score = 40.1 bits (20), Expect = 3.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 190 tcttcggctacgacatcgggatctccgg 217 |||||||||||||| |||| |||||||| Sbjct: 5062 tcttcggctacgacctcggcatctccgg 5035
>gb|U81031.2|HSU81031 Homo sapiens CDK4, SAS, and KIAA0167 genes, complete cds; and OS9 gene, partial cds; from cosmid 6E5, complete sequence Length = 45998 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 ggcggggtggccgcgctgggcgtg 104 |||| ||||||||||||||||||| Sbjct: 30368 ggcgtggtggccgcgctgggcgtg 30345
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 ccgcatgacgctggccgtcg 153 |||||||||||||||||||| Sbjct: 2572799 ccgcatgacgctggccgtcg 2572780
>ref|NM_014770.2| Homo sapiens centaurin, gamma 1 (CENTG1), mRNA Length = 3938 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 ggcggggtggccgcgctgggcgtg 104 |||| ||||||||||||||||||| Sbjct: 2512 ggcgtggtggccgcgctgggcgtg 2489
>gb|AF413077.1|AF413077 Homo sapiens centaurin gamma1 mRNA, complete cds Length = 2511 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 ggcggggtggccgcgctgggcgtg 104 |||| ||||||||||||||||||| Sbjct: 2426 ggcgtggtggccgcgctgggcgtg 2403
>gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 genomic sequence, complete sequence Length = 132927 Score = 40.1 bits (20), Expect = 3.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 190 tcttcggctacgacatcgggatctccgg 217 |||||||||||||| |||| |||||||| Sbjct: 36899 tcttcggctacgacctcggcatctccgg 36926
>gb|AC027304.4| Homo sapiens chromosome 5 clone CTB-118N6, complete sequence Length = 111096 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ctcctcctcccccttgcctc 37 |||||||||||||||||||| Sbjct: 47852 ctcctcctcccccttgcctc 47833
>gb|AC154395.4| Mus musculus chromosome 3, clone RP23-373G12, complete sequence Length = 255105 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 ctcctcctcccccttgcctc 37 |||||||||||||||||||| Sbjct: 60571 ctcctcctcccccttgcctc 60590
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 3.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 190 tcttcggctacgacatcgggatctccgg 217 |||||||||||||| |||| |||||||| Sbjct: 21604995 tcttcggctacgacctcggcatctccgg 21605022
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 3.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 192 ttcggctacgacatcgggatctccggaggagtgacc 227 |||||||||||| |||| |||||||| || |||||| Sbjct: 5781813 ttcggctacgacgtcggcatctccggcggcgtgacc 5781778 Score = 40.1 bits (20), Expect = 3.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 190 tcttcggctacgacatcgggatctccgg 217 ||||||||||||||||||| ||||||| Sbjct: 1701727 tcttcggctacgacatcggcgtctccgg 1701754 Score = 40.1 bits (20), Expect = 3.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 190 tcttcggctacgacatcgggatctccgg 217 ||||||||||||||||||| ||||||| Sbjct: 1669145 tcttcggctacgacatcggcgtctccgg 1669172
>gb|DQ005355.1| Hepatitis C virus clone P3B1 nonstructural protein 5A gene, partial cds Length = 1220 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 tcgtcgccgccgtcgggggc 185 |||||||||||||||||||| Sbjct: 1094 tcgtcgccgccgtcgggggc 1075
>gb|AF384128.1| Homo sapiens GTP-binding and GTPase activating protein mRNA, complete cds Length = 3938 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 ggcggggtggccgcgctgggcgtg 104 |||| ||||||||||||||||||| Sbjct: 2512 ggcgtggtggccgcgctgggcgtg 2489
>gb|AC087393.7| Homo sapiens chromosome 17, clone RP11-746M1, complete sequence Length = 235968 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 ctcctcctcccccttgcctc 37 |||||||||||||||||||| Sbjct: 30474 ctcctcctcccccttgcctc 30493
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 3.3 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 144 ctggccgtc-gccatggcctgcctcgtcgccgccgt 178 ||||||||| ||| |||||||||||| ||||||||| Sbjct: 422024 ctggccgtccgccgtggcctgcctcgccgccgccgt 422059
>gb|AE004501.1| Pseudomonas aeruginosa PAO1, section 62 of 529 of the complete genome Length = 10832 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 catcttcggctacgacatcg 207 |||||||||||||||||||| Sbjct: 6274 catcttcggctacgacatcg 6255
>gb|AC008524.6|AC008524 Homo sapiens chromosome 5 clone CTC-466O6, complete sequence Length = 154061 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ctcctcctcccccttgcctc 37 |||||||||||||||||||| Sbjct: 10312 ctcctcctcccccttgcctc 10293
>gb|AC087294.18| Homo sapiens chromosome 17, clone RP11-64J19, complete sequence Length = 177017 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 ctcctcctcccccttgcctc 37 |||||||||||||||||||| Sbjct: 166930 ctcctcctcccccttgcctc 166949
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ctgcctcgtcgccgccgtcg 180 |||||||||||||||||||| Sbjct: 99478 ctgcctcgtcgccgccgtcg 99497
>dbj|AP003943.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1119_B04 Length = 151721 Score = 40.1 bits (20), Expect = 3.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 192 ttcggctacgacatcgggatctccggaggagtgacc 227 |||||||||||| |||| |||||||| || |||||| Sbjct: 88841 ttcggctacgacgtcggcatctccggcggcgtgacc 88806
>dbj|AP005680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1352_A10 Length = 111655 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 gggcgtgaagaaggagaggg 117 |||||||||||||||||||| Sbjct: 106220 gggcgtgaagaaggagaggg 106239
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 ggcgggcggcggggtggccg 93 |||||||||||||||||||| Sbjct: 2469756 ggcgggcggcggggtggccg 2469775
>dbj|AP004781.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0691E09 Length = 149859 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ctgcctcgtcgccgccgtcg 180 |||||||||||||||||||| Sbjct: 2098 ctgcctcgtcgccgccgtcg 2079
>dbj|AP003711.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417G12 Length = 163568 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ctgcctcgtcgccgccgtcg 180 |||||||||||||||||||| Sbjct: 105467 ctgcctcgtcgccgccgtcg 105448
>dbj|AP004014.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1606_D04 Length = 92729 Score = 40.1 bits (20), Expect = 3.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 190 tcttcggctacgacatcgggatctccgg 217 ||||||||||||||||||| ||||||| Sbjct: 43927 tcttcggctacgacatcggcgtctccgg 43954 Score = 40.1 bits (20), Expect = 3.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 190 tcttcggctacgacatcgggatctccgg 217 ||||||||||||||||||| ||||||| Sbjct: 11345 tcttcggctacgacatcggcgtctccgg 11372
>dbj|AP006172.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0088O14 Length = 179483 Score = 40.1 bits (20), Expect = 3.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 190 tcttcggctacgacatcgggatctccgg 217 ||||||||||||||||||| ||||||| Sbjct: 170382 tcttcggctacgacatcggcgtctccgg 170409 Score = 40.1 bits (20), Expect = 3.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 190 tcttcggctacgacatcgggatctccgg 217 ||||||||||||||||||| ||||||| Sbjct: 137800 tcttcggctacgacatcggcgtctccgg 137827
>emb|BX510362.9| Mouse DNA sequence from clone RP23-371L4 on chromosome 2, complete sequence Length = 98800 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ctcctcctcccccttgcctc 37 |||||||||||||||||||| Sbjct: 69429 ctcctcctcccccttgcctc 69410
>dbj|D79989.1| Homo sapiens mRNA for KIAA0167 gene, partial cds Length = 3950 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 ggcggggtggccgcgctgggcgtg 104 |||| ||||||||||||||||||| Sbjct: 2514 ggcgtggtggccgcgctgggcgtg 2491
>dbj|AK119911.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-C06, full insert sequence Length = 1750 Score = 40.1 bits (20), Expect = 3.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 192 ttcggctacgacatcgggatctccggaggagtgacc 227 |||||||||||| |||| |||||||| || |||||| Sbjct: 166 ttcggctacgacgtcggcatctccggcggcgtgacc 201
>dbj|AK073403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042F02, full insert sequence Length = 2138 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ctgcctcgtcgccgccgtcg 180 |||||||||||||||||||| Sbjct: 1794 ctgcctcgtcgccgccgtcg 1813
>dbj|AK068296.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149H14, full insert sequence Length = 1919 Score = 40.1 bits (20), Expect = 3.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 190 tcttcggctacgacatcgggatctccgg 217 ||||||||||||||||||| ||||||| Sbjct: 267 tcttcggctacgacatcggcgtctccgg 294
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 3.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 190 tcttcggctacgacatcgggatctccgg 217 |||||||||||||| |||| |||||||| Sbjct: 21616658 tcttcggctacgacctcggcatctccgg 21616685
>gb|AC122892.4| Mus musculus BAC clone RP23-66P19 from 8, complete sequence Length = 216389 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ctcctcctcccccttgcctc 37 |||||||||||||||||||| Sbjct: 164018 ctcctcctcccccttgcctc 163999
>gb|AC167562.5| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940122D9, complete sequence Length = 114898 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ggggtggccgcgctgggcgtgaag 107 ||||||||||||||||| |||||| Sbjct: 64451 ggggtggccgcgctgggggtgaag 64474
>gb|AC101944.16| Mus musculus chromosome 1, clone RP24-118B6, complete sequence Length = 174560 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 ctcctcctcccccttgcctc 37 |||||||||||||||||||| Sbjct: 84965 ctcctcctcccccttgcctc 84984
>emb|AL772389.10| Mouse DNA sequence from clone RP23-106D7 on chromosome 2, complete sequence Length = 211326 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 ctcctcctcccccttgcctc 37 |||||||||||||||||||| Sbjct: 50086 ctcctcctcccccttgcctc 50105
>emb|AL671908.8| Mouse DNA sequence from clone RP23-307G22 on chromosome X, complete sequence Length = 205224 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ctcctcctcccccttgcctc 37 |||||||||||||||||||| Sbjct: 110113 ctcctcctcccccttgcctc 110094
>gb|AC154098.6| Mus musculus chromosome 3, clone RP23-196L9, complete sequence Length = 201332 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ctcctcctcccccttgcctc 37 |||||||||||||||||||| Sbjct: 153551 ctcctcctcccccttgcctc 153532 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,394,039 Number of Sequences: 3902068 Number of extensions: 2394039 Number of successful extensions: 69713 Number of sequences better than 10.0: 130 Number of HSP's better than 10.0 without gapping: 134 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 67931 Number of HSP's gapped (non-prelim): 1783 length of query: 255 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 233 effective length of database: 17,147,199,772 effective search space: 3995297546876 effective search space used: 3995297546876 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)