ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast48g12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_480184.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1223 Score = 127 bits (64), Expect = 3e-26 Identities = 109/124 (87%) Strand = Plus / Plus Query: 107 cggccatggggttcccgtcagtgtgctactgcgtcatcctgccgcagccgctcatcctgg 166 |||| |||||||||||||| |||||||||||||| || |||||||||||||| | |||| Sbjct: 82 cggcgatggggttcccgtcggtgtgctactgcgtgatactgccgcagccgctggtgctgg 141 Query: 167 tgctgcagctgctcgacttcctccggcacgcggtcttgctctgcctctcctcgctcggcc 226 ||||||||||||||||| | || || ||||| || |||||||||||||| ||||||||| Sbjct: 142 tgctgcagctgctcgacctgctgcgccacgccttcctgctctgcctctccgcgctcggcc 201 Query: 227 tcgc 230 |||| Sbjct: 202 tcgc 205
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 127 bits (64), Expect = 3e-26 Identities = 109/124 (87%) Strand = Plus / Minus Query: 107 cggccatggggttcccgtcagtgtgctactgcgtcatcctgccgcagccgctcatcctgg 166 |||| |||||||||||||| |||||||||||||| || |||||||||||||| | |||| Sbjct: 3321156 cggcgatggggttcccgtcggtgtgctactgcgtgatactgccgcagccgctggtgctgg 3321097 Query: 167 tgctgcagctgctcgacttcctccggcacgcggtcttgctctgcctctcctcgctcggcc 226 ||||||||||||||||| | || || ||||| || |||||||||||||| ||||||||| Sbjct: 3321096 tgctgcagctgctcgacctgctgcgccacgccttcctgctctgcctctccgcgctcggcc 3321037 Query: 227 tcgc 230 |||| Sbjct: 3321036 tcgc 3321033
>dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0438H08 Length = 148626 Score = 127 bits (64), Expect = 3e-26 Identities = 109/124 (87%) Strand = Plus / Minus Query: 107 cggccatggggttcccgtcagtgtgctactgcgtcatcctgccgcagccgctcatcctgg 166 |||| |||||||||||||| |||||||||||||| || |||||||||||||| | |||| Sbjct: 98723 cggcgatggggttcccgtcggtgtgctactgcgtgatactgccgcagccgctggtgctgg 98664 Query: 167 tgctgcagctgctcgacttcctccggcacgcggtcttgctctgcctctcctcgctcggcc 226 ||||||||||||||||| | || || ||||| || |||||||||||||| ||||||||| Sbjct: 98663 tgctgcagctgctcgacctgctgcgccacgccttcctgctctgcctctccgcgctcggcc 98604 Query: 227 tcgc 230 |||| Sbjct: 98603 tcgc 98600
>dbj|AK108144.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-E12, full insert sequence Length = 1223 Score = 127 bits (64), Expect = 3e-26 Identities = 109/124 (87%) Strand = Plus / Plus Query: 107 cggccatggggttcccgtcagtgtgctactgcgtcatcctgccgcagccgctcatcctgg 166 |||| |||||||||||||| |||||||||||||| || |||||||||||||| | |||| Sbjct: 82 cggcgatggggttcccgtcggtgtgctactgcgtgatactgccgcagccgctggtgctgg 141 Query: 167 tgctgcagctgctcgacttcctccggcacgcggtcttgctctgcctctcctcgctcggcc 226 ||||||||||||||||| | || || ||||| || |||||||||||||| ||||||||| Sbjct: 142 tgctgcagctgctcgacctgctgcgccacgccttcctgctctgcctctccgcgctcggcc 201 Query: 227 tcgc 230 |||| Sbjct: 202 tcgc 205
>gb|AC159623.3| Mus musculus BAC clone RP24-308O7 from chromosome 12, complete sequence Length = 165043 Score = 46.1 bits (23), Expect = 0.080 Identities = 23/23 (100%) Strand = Plus / Minus Query: 67 ctttctctctctctaattacaag 89 ||||||||||||||||||||||| Sbjct: 131080 ctttctctctctctaattacaag 131058
>ref|XM_474222.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 531 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 171 gcagctgctcgacttcctccgg 192 |||||||||||||||||||||| Sbjct: 144 gcagctgctcgacttcctccgg 165
>ref|XM_462836.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 318 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 ccacctctcctctccttcctcc 32 |||||||||||||||||||||| Sbjct: 284 ccacctctcctctccttcctcc 263
>gb|AY023163.1| Oryza sativa microsatellite MRG5488 containing (GCG)X8, closest to marker RM131, genomic sequence Length = 224 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 171 gcagctgctcgacttcctccgg 192 |||||||||||||||||||||| Sbjct: 64 gcagctgctcgacttcctccgg 43
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 144 cctgccgcagccgctcatcctg 165 |||||||||||||||||||||| Sbjct: 3286442 cctgccgcagccgctcatcctg 3286463
>gb|AC165163.2| Mus musculus BAC clone RP23-146B12 from chromosome 14, complete sequence Length = 178254 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 14 cctctcctctccttcctcccac 35 |||||||||||||||||||||| Sbjct: 87517 cctctcctctccttcctcccac 87538
>emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K01, complete sequence Length = 163448 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 171 gcagctgctcgacttcctccgg 192 |||||||||||||||||||||| Sbjct: 28007 gcagctgctcgacttcctccgg 28028
>gb|AC162385.4| Mus musculus 10 BAC RP24-397D18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 202541 Score = 44.1 bits (22), Expect = 0.31 Identities = 28/30 (93%) Strand = Plus / Minus Query: 18 tcctctccttcctcccaccgtcccacctcc 47 ||||||||||||||||| ||||||||||| Sbjct: 121328 tcctctccttcctcccattgtcccacctcc 121299
>gb|AC007540.3| Homo sapiens 12q24.1 BAC RPCI11-128P10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174652 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 cctctccttcctcccaccgtcc 40 |||||||||||||||||||||| Sbjct: 165389 cctctccttcctcccaccgtcc 165368
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 171 gcagctgctcgacttcctccgg 192 |||||||||||||||||||||| Sbjct: 33816108 gcagctgctcgacttcctccgg 33816129
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.31 Identities = 37/42 (88%) Strand = Plus / Plus Query: 110 ccatggggttcccgtcagtgtgctactgcgtcatcctgccgc 151 ||||||| |||||| | |||| ||||||||||||||| |||| Sbjct: 13513603 ccatgggcttcccggcggtgtactactgcgtcatcctcccgc 13513644 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 agctgctcgacttcctccgg 192 |||||||||||||||||||| Sbjct: 23144045 agctgctcgacttcctccgg 23144026
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 ccacctctcctctccttcctcc 32 |||||||||||||||||||||| Sbjct: 10207373 ccacctctcctctccttcctcc 10207352
>gb|AC156392.5| Mus musculus 10 BAC RP24-320E8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 188305 Score = 44.1 bits (22), Expect = 0.31 Identities = 28/30 (93%) Strand = Plus / Plus Query: 18 tcctctccttcctcccaccgtcccacctcc 47 ||||||||||||||||| ||||||||||| Sbjct: 136262 tcctctccttcctcccattgtcccacctcc 136291
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 336 gccggcgccctcgccggcggcc 357 |||||||||||||||||||||| Sbjct: 4481458 gccggcgccctcgccggcggcc 4481437
>dbj|AP003020.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0498A12 Length = 159749 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 ccacctctcctctccttcctcc 32 |||||||||||||||||||||| Sbjct: 72687 ccacctctcctctccttcctcc 72666
>dbj|AP005831.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1123E10 Length = 134641 Score = 44.1 bits (22), Expect = 0.31 Identities = 37/42 (88%) Strand = Plus / Plus Query: 110 ccatggggttcccgtcagtgtgctactgcgtcatcctgccgc 151 ||||||| |||||| | |||| ||||||||||||||| |||| Sbjct: 93286 ccatgggcttcccggcggtgtactactgcgtcatcctcccgc 93327
>dbj|AP003018.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0004B13 Length = 142268 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 ccacctctcctctccttcctcc 32 |||||||||||||||||||||| Sbjct: 131972 ccacctctcctctccttcctcc 131951
>gb|DQ224800.1| Uncultured cyanobacterium clone cyano1004123U21 16S ribosomal RNA gene, partial sequence Length = 379 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 183 cttcctccggcacgcggtcttgctc 207 |||||||| |||||||||||||||| Sbjct: 38 cttcctcccgcacgcggtcttgctc 14
>ref|XM_867667.1| PREDICTED: Bos taurus hypothetical protein LOC615639, transcript variant 1 (LOC615639), mRNA Length = 1431 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 tcctcccaccgtcccacctcc 47 ||||||||||||||||||||| Sbjct: 379 tcctcccaccgtcccacctcc 399
>gb|AF445707.1| Uncultured cyanobacterium clone SM2A06 16S ribosomal RNA gene, partial sequence Length = 1448 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 183 cttcctccggcacgcggtcttgctc 207 |||||||| |||||||||||||||| Sbjct: 375 cttcctcccgcacgcggtcttgctc 351
>gb|AF445678.1| Uncultured cyanobacterium clone SM1D12 16S ribosomal RNA gene, partial sequence Length = 1448 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 183 cttcctccggcacgcggtcttgctc 207 |||||||| |||||||||||||||| Sbjct: 375 cttcctcccgcacgcggtcttgctc 351
>gb|AF076164.1| Uncultured Antarctic bacterium LB3-75 16S ribosomal RNA gene, partial sequence Length = 1455 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 183 cttcctccggcacgcggtcttgctc 207 |||||||| |||||||||||||||| Sbjct: 351 cttcctcccgcacgcggtcttgctc 327
>gb|AF076165.1| Uncultured Antarctic bacterium LB3-46 16S ribosomal RNA gene, partial sequence Length = 1453 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 183 cttcctccggcacgcggtcttgctc 207 |||||||| |||||||||||||||| Sbjct: 351 cttcctcccgcacgcggtcttgctc 327
>gb|AC117228.2| Mus musculus BAC clone RP23-380J24 from chromosome 2, complete sequence Length = 179980 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 tctcctctccttcctcccacc 36 ||||||||||||||||||||| Sbjct: 77549 tctcctctccttcctcccacc 77569
>gb|AC002386.2| Homo sapiens BAC clone CTA-343H22 from 7, complete sequence Length = 131458 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 ctcctctccttcctcccaccgtccc 41 |||||||||||||||||||| |||| Sbjct: 22602 ctcctctccttcctcccaccctccc 22578
>gb|AY151756.1| Uncultured Antarctic cyanobacterium clone Fr114 16S ribosomal RNA gene, partial sequence Length = 501 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 183 cttcctccggcacgcggtcttgctc 207 |||||||| |||||||||||||||| Sbjct: 101 cttcctcccgcacgcggtcttgctc 77
>gb|AY151754.1| Uncultured Antarctic cyanobacterium clone Fr025 16S ribosomal RNA gene, partial sequence Length = 672 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 183 cttcctccggcacgcggtcttgctc 207 |||||||| |||||||||||||||| Sbjct: 295 cttcctcccgcacgcggtcttgctc 271
>gb|AY151735.1| Uncultured Antarctic cyanobacterium clone Fr397 16S ribosomal RNA gene, complete sequence Length = 1394 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 183 cttcctccggcacgcggtcttgctc 207 |||||||| |||||||||||||||| Sbjct: 355 cttcctcccgcacgcggtcttgctc 331
>gb|AY151727.1| Uncultured Antarctic cyanobacterium clone Fr094 16S ribosomal RNA gene, complete sequence Length = 1398 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 183 cttcctccggcacgcggtcttgctc 207 |||||||| |||||||||||||||| Sbjct: 355 cttcctcccgcacgcggtcttgctc 331
>emb|AL445646.11| Human DNA sequence from clone RP11-217F16 on chromosome 9 Contains a pseudogene similar to part of member RAB7 of RAS oncogene family (RAB7) and part of a ribosomal protein S12 (RPS12) pseudogene, complete sequence Length = 64120 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 ctcctctccttcctcccaccgtccc 41 |||||||||||||||||||| |||| Sbjct: 57503 ctcctctccttcctcccaccctccc 57479
>emb|AL162595.17| Human DNA sequence from clone RP5-1061H20 on chromosome 1 Contains three novel genes, a novel pseudogene, the 5' end of the RAB4A gene for RAB4A, member RAS oncogene family and a CpG island, complete sequence Length = 115018 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 tctcctctccttcctcccacc 36 ||||||||||||||||||||| Sbjct: 23243 tctcctctccttcctcccacc 23223
>gb|AC104610.13| Drosophila melanogaster 3L BAC RP98-35J16 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 138534 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 ccacctctcctctccttcctcccac 35 |||||||||||||||||| |||||| Sbjct: 121759 ccacctctcctctccttcttcccac 121735
>gb|AC055777.12| Mus musculus chromosome 10, clone RP23-56K17, complete sequence Length = 186105 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ctctcctctccttcctcccac 35 ||||||||||||||||||||| Sbjct: 97190 ctctcctctccttcctcccac 97170
>ref|NM_132163.2| Drosophila melanogaster lethal (1) G0331 CG2079-RA (l(1)G0331), mRNA Length = 3492 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 ccacctctcctctccttcctcccac 35 |||||||||||||||||| |||||| Sbjct: 355 ccacctctcctctccttcttcccac 331
>gb|AC093905.3| Homo sapiens BAC clone RP11-739C17 from 4, complete sequence Length = 184862 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 17 ctcctctccttcctcccaccgtccc 41 |||||||||||||||||||| |||| Sbjct: 74796 ctcctctccttcctcccaccctccc 74820
>gb|AY061397.1| Drosophila melanogaster LD32155 full length cDNA Length = 3515 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 ccacctctcctctccttcctcccac 35 |||||||||||||||||| |||||| Sbjct: 355 ccacctctcctctccttcttcccac 331
>gb|DP000045.1| Pongo pygmaeus target 106 genomic scaffold Length = 644818 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 18 tcctctccttcctcccaccgtccca 42 ||||||||||||||||||| ||||| Sbjct: 357855 tcctctccttcctcccaccctccca 357879
>gb|AC097475.2| Homo sapiens BAC clone RP11-95J1 from 4, complete sequence Length = 136159 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 gctcatcctggtgctgcagct 176 ||||||||||||||||||||| Sbjct: 91395 gctcatcctggtgctgcagct 91415
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 337 ccggcgccctcgccggcggcc 357 ||||||||||||||||||||| Sbjct: 6106626 ccggcgccctcgccggcggcc 6106646
>gb|AC126471.4| Homo sapiens 12 BAC RP11-629O19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 199945 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 18 tcctctccttcctcccaccgtcccacctc 46 ||||||||||||||||||| ||| ||||| Sbjct: 171466 tcctctccttcctcccaccttccaacctc 171494
>gb|AY541570.1| Uncultured Antarctic cyanobacterium clone FreP16 16S ribosomal RNA gene, partial sequence Length = 801 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 183 cttcctccggcacgcggtcttgctc 207 |||||||| |||||||||||||||| Sbjct: 377 cttcctcccgcacgcggtcttgctc 353
>gb|AY541567.1| Uncultured Antarctic cyanobacterium clone FreP17 16S ribosomal RNA gene, partial sequence Length = 801 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 183 cttcctccggcacgcggtcttgctc 207 |||||||| |||||||||||||||| Sbjct: 377 cttcctcccgcacgcggtcttgctc 353
>gb|AF191069.1|AF191069 Homo sapiens chromosome 21 clone P704-682K20 map 21q22.1, complete sequence Length = 108965 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 17 ctcctctccttcctcccaccgtccc 41 |||||||||||||||||||| |||| Sbjct: 31452 ctcctctccttcctcccaccctccc 31476
>gb|AF096876.1|AF096876 Homo sapiens chromosome 21q22.1 PAC K09209, complete sequence Length = 109864 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 17 ctcctctccttcctcccaccgtccc 41 |||||||||||||||||||| |||| Sbjct: 9577 ctcctctccttcctcccaccctccc 9601
>emb|AL928793.13| Mouse DNA sequence from clone RP23-89M14 on chromosome 2, complete sequence Length = 238545 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 tctcctctccttcctcccacc 36 ||||||||||||||||||||| Sbjct: 3618 tctcctctccttcctcccacc 3598
>emb|Y18794.1|HALY18794 Spirulina sp. strain MPI S1, 16S rRNA gene Length = 558 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 183 cttcctccggcacgcggtcttgctc 207 |||||||| |||||||||||||||| Sbjct: 249 cttcctcccgcacgcggtcttgctc 225
>emb|Y18793.1|HALY18793 Spirulina sp. strain CCC Snake P. Y-85, 16S rRNA gene Length = 1475 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 183 cttcctccggcacgcggtcttgctc 207 |||||||| |||||||||||||||| Sbjct: 376 cttcctcccgcacgcggtcttgctc 352
>gb|AY110904.1| Zea mays CL18291_1 mRNA sequence Length = 631 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 atcctggtgctgcagctgctc 180 ||||||||||||||||||||| Sbjct: 560 atcctggtgctgcagctgctc 540
>gb|AC156387.5| Mus musculus 10 BAC RP24-396H15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 230270 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 ctctcctctccttcctcccac 35 ||||||||||||||||||||| Sbjct: 212061 ctctcctctccttcctcccac 212081
>gb|AE003440.3| Drosophila melanogaster chromosome X, section 24 of 74 of the complete sequence Length = 342195 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 ccacctctcctctccttcctcccac 35 |||||||||||||||||| |||||| Sbjct: 153146 ccacctctcctctccttcttcccac 153122
>dbj|AP001707.1| Homo sapiens genomic DNA, chromosome 21q, section 51/105 Length = 340000 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 17 ctcctctccttcctcccaccgtccc 41 |||||||||||||||||||| |||| Sbjct: 58045 ctcctctccttcctcccaccctccc 58069
>gb|DQ213253.1| Taeniopygia guttata clone 0061P0009H11 mRNA sequence Length = 1188 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 tcctggtgctgcagctgctc 180 |||||||||||||||||||| Sbjct: 505 tcctggtgctgcagctgctc 524
>ref|XM_507377.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1699_E05.22-1 mRNA Length = 1264 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 agctgctcgacttcctccgg 192 |||||||||||||||||||| Sbjct: 349 agctgctcgacttcctccgg 368
>ref|XM_478802.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1253 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 agctgctcgacttcctccgg 192 |||||||||||||||||||| Sbjct: 334 agctgctcgacttcctccgg 353
>ref|XM_506422.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1699_E05.22-1 mRNA Length = 1421 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 agctgctcgacttcctccgg 192 |||||||||||||||||||| Sbjct: 377 agctgctcgacttcctccgg 396
>ref|XM_477726.1| Oryza sativa (japonica cultivar-group), mRNA Length = 420 Score = 40.1 bits (20), Expect = 4.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 112 atggggttcccgtcagtgtgctactgcgtcatcctgccgc 151 ||||| |||||| | |||| ||||||||||||||| |||| Sbjct: 1 atgggcttcccggcggtgtactactgcgtcatcctcccgc 40
>gb|AC116800.11| Mus musculus chromosome 8, clone RP24-335D17, complete sequence Length = 168912 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 cccacctctcctctccttcctccc 33 |||||| ||||||||||||||||| Sbjct: 61753 cccacccctcctctccttcctccc 61730
>gb|AC119856.13| Mus musculus chromosome 5, clone RP23-256B18, complete sequence Length = 218174 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cctctcctctccttcctccc 33 |||||||||||||||||||| Sbjct: 209097 cctctcctctccttcctccc 209116
>gb|AC114420.11| Mus musculus chromosome 5, clone RP23-375E13, complete sequence Length = 155958 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cctctcctctccttcctccc 33 |||||||||||||||||||| Sbjct: 34497 cctctcctctccttcctccc 34516
>gb|AC004508.1| Homo sapiens chromosome 21, P1 clone LBL#3 (LBNL H09), complete sequence Length = 71230 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ctcctctccttcctcccacc 36 |||||||||||||||||||| Sbjct: 41901 ctcctctccttcctcccacc 41920
>gb|AC111143.10| Mus musculus chromosome 3, clone RP23-372C7, complete sequence Length = 147125 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 cctctcctctccttcctccc 33 |||||||||||||||||||| Sbjct: 18951 cctctcctctccttcctccc 18932
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 4.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 327 ggcagccgggccggcgccctcgccggcggcca 358 |||||||| ||||||| || |||||||||||| Sbjct: 340496 ggcagccgcgccggcgtccgcgccggcggcca 340527
>gb|AC149483.1| Populus trichocarpa clone Pop1-69I13, complete sequence Length = 51685 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ctggtgctgcagctgctcga 182 |||||||||||||||||||| Sbjct: 45735 ctggtgctgcagctgctcga 45754
>gb|AC025353.9| Mus musculus chromosome 9, clone RP23-93E19, complete sequence Length = 274853 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ctccttcctcccaccgtccc 41 |||||||||||||||||||| Sbjct: 38293 ctccttcctcccaccgtccc 38312
>gb|AC006358.6| Homo sapiens PAC clone RP5-1127D14 from 7, complete sequence Length = 143216 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 gcggtcttgctctgcctctc 215 |||||||||||||||||||| Sbjct: 10911 gcggtcttgctctgcctctc 10930
>gb|AC133100.5| Mus musculus BAC clone RP23-98O11 from chromosome 19, complete sequence Length = 204855 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cctctcctctccttcctccc 33 |||||||||||||||||||| Sbjct: 88432 cctctcctctccttcctccc 88451
>gb|AC090691.16| Homo sapiens chromosome 8, clone RP11-338B22, complete sequence Length = 180766 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cctctcctctccttcctccc 33 |||||||||||||||||||| Sbjct: 157847 cctctcctctccttcctccc 157866
>gb|AC024608.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-333I24, complete sequence Length = 215829 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ctcctctccttcctcccacc 36 |||||||||||||||||||| Sbjct: 177244 ctcctctccttcctcccacc 177225
>gb|AC121937.2| Mus musculus BAC clone RP24-207M20 from 9, complete sequence Length = 169399 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 attgaccccacctctcctctcctt 27 ||||||||||||||||||| |||| Sbjct: 53931 attgaccccacctctcctcacctt 53954
>gb|AC004141.1| Homo sapiens PAC clone RP5-1110N13 from 7, complete sequence Length = 95921 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ctcctctccttcctcccacc 36 |||||||||||||||||||| Sbjct: 63888 ctcctctccttcctcccacc 63869
>gb|AC005050.3| Homo sapiens BAC clone CTB-30L5 from 7, complete sequence Length = 188374 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cctctcctctccttcctccc 33 |||||||||||||||||||| Sbjct: 70847 cctctcctctccttcctccc 70866
>gb|AC004963.2| Homo sapiens PAC clone RP5-1102A12 from 7, complete sequence Length = 173627 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ctcctctccttcctcccacc 36 |||||||||||||||||||| Sbjct: 59592 ctcctctccttcctcccacc 59573
>emb|AL163285.2|HS21C085 Homo sapiens chromosome 21 segment HS21C085 Length = 340000 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ctcctctccttcctcccacc 36 |||||||||||||||||||| Sbjct: 173628 ctcctctccttcctcccacc 173647
>emb|AL449063.13| Human DNA sequence from clone RP11-413P11 on chromosome 1 Contains a novel gene, complete sequence Length = 125422 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ctcctctccttcctcccacc 36 |||||||||||||||||||| Sbjct: 51083 ctcctctccttcctcccacc 51102
>emb|AL445675.9| Human DNA sequence from clone RP11-498M14 on chromosome 1 Contains a CpG island, complete sequence Length = 171985 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ctcctctccttcctcccacc 36 |||||||||||||||||||| Sbjct: 149465 ctcctctccttcctcccacc 149484
>emb|AL161457.13| Human DNA sequence from clone RP11-88I18 on chromosome 9 Contains part of the PGM5 gene for phosphoglucomutase 5 and 2 novel genes, complete sequence Length = 124388 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ctcctctccttcctcccacc 36 |||||||||||||||||||| Sbjct: 76623 ctcctctccttcctcccacc 76642
>emb|AL157886.13| Human DNA sequence from clone RP11-59M22 on chromosome 9q21.31-21.33, complete sequence Length = 156956 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 ccacctctcctctccttcctccca 34 |||||||||||| ||||||||||| Sbjct: 19563 ccacctctcctcaccttcctccca 19540
>emb|AL136457.15| Human DNA sequence from clone RP5-1015K11 on chromosome 1q23.2-24.2 Contains ESTs, STSs, GSSs and a CpG island, complete sequence Length = 84874 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ctcctctccttcctcccacc 36 |||||||||||||||||||| Sbjct: 14277 ctcctctccttcctcccacc 14258
>gb|AC100797.4| Homo sapiens chromosome 8, clone RP11-43A14, complete sequence Length = 200340 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cctctcctctccttcctccc 33 |||||||||||||||||||| Sbjct: 34163 cctctcctctccttcctccc 34182
>emb|AL121958.6|HSDJ71H19 Human DNA sequence from clone RP1-71H19 on chromosome 6 Contains part of the PRIM2A gene for primase polypeptide 2A (58kD) and a novel gene, complete sequence Length = 138411 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ctcctctccttcctcccacc 36 |||||||||||||||||||| Sbjct: 103891 ctcctctccttcctcccacc 103872
>emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome; segment 1/13 Length = 341957 Score = 40.1 bits (20), Expect = 4.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 327 ggcagccgggccggcgccctcgccggcggcca 358 |||||||| ||||||| || |||||||||||| Sbjct: 340434 ggcagccgcgccggcgtccgcgccggcggcca 340465
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16 Length = 349497 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 gcgccctcgccggcggccat 359 |||||||||||||||||||| Sbjct: 331250 gcgccctcgccggcggccat 331231
>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14 Length = 348866 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 gcgccctcgccggcggccat 359 |||||||||||||||||||| Sbjct: 95107 gcgccctcgccggcggccat 95088
>emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 1/14 Length = 343050 Score = 40.1 bits (20), Expect = 4.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 327 ggcagccgggccggcgccctcgccggcggcca 358 |||||||| ||||||| || |||||||||||| Sbjct: 341436 ggcagccgcgccggcgtccgcgccggcggcca 341467
>emb|CR937026.1|PT085P01 Pan troglodytes chromosome 11 BAC PTB-085P01, complete sequence Length = 218832 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ctcctctccttcctcccacc 36 |||||||||||||||||||| Sbjct: 119225 ctcctctccttcctcccacc 119206
>emb|AL954241.1| Pan troglodytes chromosome 22 clone RP43-181I17 map 22q22.2-q22.3, complete sequence Length = 212865 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ctcctctccttcctcccacc 36 |||||||||||||||||||| Sbjct: 34013 ctcctctccttcctcccacc 34032
>emb|AL954240.1| Pan troglodytes chromosome 22 clone PTB-045O21 map 22q22.2-q22.3, complete sequence Length = 164591 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ctcctctccttcctcccacc 36 |||||||||||||||||||| Sbjct: 117264 ctcctctccttcctcccacc 117283
>gb|AC104117.2| Homo sapiens chromosome 5 clone RP11-281O15, complete sequence Length = 211975 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 acctctcctctccttcctcc 32 |||||||||||||||||||| Sbjct: 27474 acctctcctctccttcctcc 27493
>gb|AC078950.19| Homo sapiens 12 BAC RP11-407P10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 95155 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 ctcctctccttcctcccaccgtcc 40 ||||||||| |||||||||||||| Sbjct: 14117 ctcctctccctcctcccaccgtcc 14140
>gb|AC183417.2| Pan troglodytes BAC clone CH251-173K9 from chromosome 6, complete sequence Length = 158234 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ctcctctccttcctcccacc 36 |||||||||||||||||||| Sbjct: 65745 ctcctctccttcctcccacc 65726
>gb|AC182461.3| Pan troglodytes BAC clone CH251-673H10 from chromosome 6, complete sequence Length = 188415 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ctcctctccttcctcccacc 36 |||||||||||||||||||| Sbjct: 2202 ctcctctccttcctcccacc 2221
>gb|AC083868.3| Homo sapiens chromosome 7 clone RP11-148L5, complete sequence Length = 183541 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ctcctctccttcctcccacc 36 |||||||||||||||||||| Sbjct: 66176 ctcctctccttcctcccacc 66195
>dbj|AK126107.1| Homo sapiens cDNA FLJ44119 fis, clone THYMU1000600 Length = 4060 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ctcctctccttcctcccacc 36 |||||||||||||||||||| Sbjct: 2118 ctcctctccttcctcccacc 2137
>gb|AC114954.2| Homo sapiens chromosome 5 clone RP11-103A10, complete sequence Length = 157980 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ctcctctccttcctcccacc 36 |||||||||||||||||||| Sbjct: 84795 ctcctctccttcctcccacc 84814
>gb|AC104111.2| Homo sapiens chromosome 5 clone RP11-176O14, complete sequence Length = 171234 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ctcctctccttcctcccacc 36 |||||||||||||||||||| Sbjct: 121958 ctcctctccttcctcccacc 121939
>gb|AC106884.5| Homo sapiens BAC clone RP11-1366O24 from 4, complete sequence Length = 203424 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ctcctctccttcctcccacc 36 |||||||||||||||||||| Sbjct: 170131 ctcctctccttcctcccacc 170112
>gb|AC104978.2| Homo sapiens chromosome 11, clone RP11-244O16, complete sequence Length = 154105 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 tcctctccttcctcccaccgtccc 41 ||||||||||||||||||| |||| Sbjct: 92125 tcctctccttcctcccaccctccc 92102
>gb|AC011416.3| Homo sapiens chromosome 5 clone CTB-88F18, complete sequence Length = 142357 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ctcctctccttcctcccacc 36 |||||||||||||||||||| Sbjct: 61944 ctcctctccttcctcccacc 61963
>gb|AC152718.6| Mus musculus BAC clone RP24-432B3 from chromosome 9, complete sequence Length = 174264 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ctccttcctcccaccgtccc 41 |||||||||||||||||||| Sbjct: 128296 ctccttcctcccaccgtccc 128315
>gb|AC093559.2| Homo sapiens chromosome 1 clone RP11-138K16, complete sequence Length = 175909 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ctcctctccttcctcccacc 36 |||||||||||||||||||| Sbjct: 33149 ctcctctccttcctcccacc 33168
>gb|AC020613.33|AC020613 Homo sapiens 12 BAC RP11-508P1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 40199 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ctcctctccttcctcccacc 36 |||||||||||||||||||| Sbjct: 15813 ctcctctccttcctcccacc 15832
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 194 acgcggtcttgctctgcctctcctcgct 221 ||||||||||||| ||||||| |||||| Sbjct: 31621621 acgcggtcttgctttgcctctgctcgct 31621648
>gb|AC097462.2| Homo sapiens BAC clone RP11-18O11 from 4, complete sequence Length = 180973 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ctcctctccttcctcccacc 36 |||||||||||||||||||| Sbjct: 45662 ctcctctccttcctcccacc 45681
>gb|AC079353.5| Homo sapiens BAC clone RP11-1136K13 from 2, complete sequence Length = 113333 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ctcctctccttcctcccacc 36 |||||||||||||||||||| Sbjct: 8169 ctcctctccttcctcccacc 8150
>gb|AC129883.3| Ornithorhynchus anatinus clone OA_Bb-305F19, complete sequence Length = 181157 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ctctcctctccttcctccca 34 |||||||||||||||||||| Sbjct: 158647 ctctcctctccttcctccca 158628
>gb|AC011293.5|AC011293 Homo sapiens BAC clone RP11-75F5 from Y, complete sequence Length = 159722 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ctcctctccttcctcccacc 36 |||||||||||||||||||| Sbjct: 153077 ctcctctccttcctcccacc 153096
>gb|AC078803.6| Homo sapiens 3 BAC RP11-513M8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 14461 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ctcctctccttcctcccacc 36 |||||||||||||||||||| Sbjct: 6130 ctcctctccttcctcccacc 6149
>gb|AC009475.5| Homo sapiens BAC clone RP11-285F23 from 2, complete sequence Length = 190349 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ctcctctccttcctcccacc 36 |||||||||||||||||||| Sbjct: 3675 ctcctctccttcctcccacc 3694
>gb|AC116666.2| Homo sapiens chromosome X clone RP11-329E24 map q28, complete sequence Length = 169351 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 cccacctctcctctccttcctccc 33 ||||||||||| |||||||||||| Sbjct: 62830 cccacctctcccctccttcctccc 62807
>gb|AC108846.15| Mus musculus chromosome 9, clone RP23-12I4, complete sequence Length = 212729 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 cctctcctctccttcctccc 33 |||||||||||||||||||| Sbjct: 134945 cctctcctctccttcctccc 134926
>gb|AF274856.3| Homo sapiens chromosome X clone RP11-1007I13 map q28, complete sequence Length = 173962 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 cccacctctcctctccttcctccc 33 ||||||||||| |||||||||||| Sbjct: 170112 cccacctctcccctccttcctccc 170089
>gb|AC164651.3| Ornithorhynchus anatinus BAC clone OABb-375A1 from chromosome unknown, complete sequence Length = 183178 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 accccacctctcctctcctt 27 |||||||||||||||||||| Sbjct: 152172 accccacctctcctctcctt 152191
>gb|AC114272.4| Homo sapiens chromosome 19 clone LLNLR_296F4, complete sequence Length = 11699 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cctctcctctccttcctccc 33 |||||||||||||||||||| Sbjct: 6675 cctctcctctccttcctccc 6694 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cctctcctctccttcctccc 33 |||||||||||||||||||| Sbjct: 6556 cctctcctctccttcctccc 6575
>dbj|AP003758.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1562_B11 Length = 112144 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 agctgctcgacttcctccgg 192 |||||||||||||||||||| Sbjct: 6959 agctgctcgacttcctccgg 6940
>dbj|BS000177.1| Pan troglodytes chromosome 22 clone:PTB-118H03, map 22, complete sequences Length = 267172 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ctcctctccttcctcccacc 36 |||||||||||||||||||| Sbjct: 102427 ctcctctccttcctcccacc 102446
>dbj|AP004774.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0431B06 Length = 154796 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 194 acgcggtcttgctctgcctctcctcgct 221 ||||||||||||| ||||||| |||||| Sbjct: 112181 acgcggtcttgctttgcctctgctcgct 112208
>dbj|AP004119.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1288_G09 Length = 109672 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 194 acgcggtcttgctctgcctctcctcgct 221 ||||||||||||| ||||||| |||||| Sbjct: 1408 acgcggtcttgctttgcctctgctcgct 1435
>dbj|AK121296.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110F21, full insert sequence Length = 3078 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 agctgctcgacttcctccgg 192 |||||||||||||||||||| Sbjct: 2158 agctgctcgacttcctccgg 2177
>dbj|AP003845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1699_E05 Length = 170666 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 agctgctcgacttcctccgg 192 |||||||||||||||||||| Sbjct: 88229 agctgctcgacttcctccgg 88210
>dbj|AK104308.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-H04, full insert sequence Length = 1253 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 agctgctcgacttcctccgg 192 |||||||||||||||||||| Sbjct: 334 agctgctcgacttcctccgg 353
>dbj|AK104154.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-B07, full insert sequence Length = 1263 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 agctgctcgacttcctccgg 192 |||||||||||||||||||| Sbjct: 348 agctgctcgacttcctccgg 367
>dbj|AK072835.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134F17, full insert sequence Length = 1421 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 agctgctcgacttcctccgg 192 |||||||||||||||||||| Sbjct: 377 agctgctcgacttcctccgg 396
>emb|AL359400.4|CNS05TEW Human chromosome 14 DNA sequence BAC R-114L12 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 175668 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ctcctctccttcctcccacc 36 |||||||||||||||||||| Sbjct: 144908 ctcctctccttcctcccacc 144889
>gb|AY107113.1| Zea mays PCO075497 mRNA sequence Length = 656 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tcctctccttcctcccaccg 37 |||||||||||||||||||| Sbjct: 371 tcctctccttcctcccaccg 352
>emb|AL049836.3|CNS0000H Human chromosome 14 DNA sequence BAC R-1029J19 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 207774 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cctctcctctccttcctccc 33 |||||||||||||||||||| Sbjct: 138200 cctctcctctccttcctccc 138219
>emb|AL355032.6|CNS05TC3 Human chromosome 14 DNA sequence BAC R-796G6 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 203108 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 cctctcctctccttcctccc 33 |||||||||||||||||||| Sbjct: 153852 cctctcctctccttcctccc 153833
>gb|AC105905.10| Mus musculus chromosome 7, clone RP24-79I18, complete sequence Length = 215285 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 gaccccacctctcctctcct 26 |||||||||||||||||||| Sbjct: 147675 gaccccacctctcctctcct 147656
>gb|AC107860.12| Mus musculus chromosome 7, clone RP23-21P17, complete sequence Length = 182673 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 gaccccacctctcctctcct 26 |||||||||||||||||||| Sbjct: 61378 gaccccacctctcctctcct 61359
>gb|AC140839.9| Mus musculus chromosome 3, clone RP24-316D12, complete sequence Length = 168722 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cctctcctctccttcctccc 33 |||||||||||||||||||| Sbjct: 148997 cctctcctctccttcctccc 149016
>dbj|AP003050.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-410I24, complete sequence Length = 152715 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 ccccacctctcctctccttc 28 |||||||||||||||||||| Sbjct: 18479 ccccacctctcctctccttc 18460
>emb|AL845297.15| Mouse DNA sequence from clone RP23-207P16 on chromosome 2, complete sequence Length = 203641 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 cccacctctcctctccttcc 29 |||||||||||||||||||| Sbjct: 98550 cccacctctcctctccttcc 98531
>emb|AL773578.1|HS265B9 Homo sapiens chromosome 21 from PAC RP1-265B9 map 21q22.2,D21S349-MX1, complete sequence Length = 157662 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ctcctctccttcctcccacc 36 |||||||||||||||||||| Sbjct: 99847 ctcctctccttcctcccacc 99866
>gb|AC132606.3| Mus musculus BAC clone RP23-434H18 from 8, complete sequence Length = 215743 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 cccacctctcctctccttcctccc 33 |||||| ||||||||||||||||| Sbjct: 6251 cccacccctcctctccttcctccc 6274
>gb|AC170997.2| Mus musculus BAC clone RP24-198N9 from chromosome 9, complete sequence Length = 146891 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 cctctcctctccttcctccc 33 |||||||||||||||||||| Sbjct: 1515 cctctcctctccttcctccc 1496
>emb|AL731806.13| Mouse DNA sequence from clone RP23-329N12 on chromosome 9, complete sequence Length = 89170 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ctccttcctcccaccgtccc 41 |||||||||||||||||||| Sbjct: 69129 ctccttcctcccaccgtccc 69110
>emb|AL354926.17| Human DNA sequence from clone RP1-216J23 on chromosome 6, complete sequence Length = 163140 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ctcctctccttcctcccacc 36 |||||||||||||||||||| Sbjct: 16553 ctcctctccttcctcccacc 16534
>dbj|AP002512.4| Homo sapiens genomic DNA, chromosome 11q clone:CTD-3051L14, complete sequences Length = 175031 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ctcctctccttcctcccacc 36 |||||||||||||||||||| Sbjct: 94298 ctcctctccttcctcccacc 94279
>dbj|AP003972.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-861E23, complete sequence Length = 181946 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 tcctctccttcctcccaccgtccc 41 ||||||||||||||||||| |||| Sbjct: 83420 tcctctccttcctcccaccctccc 83397 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,848,230 Number of Sequences: 3902068 Number of extensions: 7848230 Number of successful extensions: 182750 Number of sequences better than 10.0: 142 Number of HSP's better than 10.0 without gapping: 143 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 181363 Number of HSP's gapped (non-prelim): 1387 length of query: 369 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 347 effective length of database: 17,147,199,772 effective search space: 5950078320884 effective search space used: 5950078320884 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
