>X3CL1_RAT (O55145) Fractalkine precursor (CX3CL1) (Neurotactin) (CX3C|
           membrane-anchored chemokine) (Small inducible cytokine
           D1)
          Length = 393

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = +3

Query: 3   NHTHTHIFTDQSSRSPRHPSARTRSSERQWQEPAPPRVTS 122
           N  HT IF D+   S  HPS    SSE+    P+P  V S
Sbjct: 264 NPVHTDIFQDRGPGSTVHPSVAPTSSEK---TPSPELVAS 300

>SGOL2_HUMAN (Q562F6) Shugoshin-like 2 (Tripin)|
          Length = 1265

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 7/45 (15%)
 Frame = +3

Query: 15  THIFTDQSSRSPRHPSARTRSS-ERQWQEPAPPRVT------SSW 128
           +H  +DQSS++      R   S  R+W++P+P  VT      SSW
Sbjct: 236 SHSHSDQSSKTSLMSEMRNAQSIGRRWEKPSPSNVTERKKRGSSW 280

>DYHC_PARTE (Q27171) Dynein heavy chain, cytosolic (DYHC) (DHC08)|
          Length = 4540

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 13/42 (30%), Positives = 16/42 (38%)
 Frame = +3

Query: 3    NHTHTHIFTDQSSRSPRHPSARTRSSERQWQEPAPPRVTSSW 128
            NH H   FT +   +   P  RT     QW E  P   +  W
Sbjct: 4180 NHNHPLFFTLEGKEAITVPEGRTYLDFMQWIEQLPKTESPEW 4221

>SSB_PSEAE (P40947) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 164

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 30  DQSSRSPRHPSARTRSSERQWQEPAP 107
           D S R+PR P  R + + +Q   PAP
Sbjct: 118 DDSQRAPREPMQRPQQAPQQQSRPAP 143

>TGM1_CANFA (Q9GLK0) Protein-glutamine gamma-glutamyltransferase K (EC|
           2.3.2.13) (Transglutaminase K) (TGase K) (TGK) (TG(K))
           (Transglutaminase-1) (Epidermal TGase)
          Length = 815

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 182 PSTISAAPEPSPYPLLQPRHGGR 250
           P+T S  PEP P P  + R GGR
Sbjct: 19  PTTPSPEPEPEPEPERRSRRGGR 41

>FOXE3_HUMAN (Q13461) Forkhead box protein E3 (Forkhead-related protein FKHL12)|
           (Forkhead-related transcription factor 8) (FREAC-8)
          Length = 319

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 307 AAAPVPGPGRRRAGTVRRG 363
           A  P PGPGRRR   ++RG
Sbjct: 52  APTPAPGPGRRRRRPLQRG 70

>VCOM_ADEM1 (O10442) Minor core protein (Protein V) (pV)|
          Length = 228

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 20/77 (25%), Positives = 28/77 (36%)
 Frame = +2

Query: 8   HAHTHLHRPILSLAAPPQRTHTQLRAPMARTGAAPRHXXXXXXXXXXXXXXXXXXXXQPS 187
           H    + RP  +  +PP+R   + R+P  R  AA R                      P 
Sbjct: 140 HPSIEVARPPAARISPPRRRRRRRRSPRPRATAAYRSSAEVVERRRRVAQTVPVVRYHP- 198

Query: 188 TISAAPEPSPYPLLQPR 238
             S   EP+ +P L PR
Sbjct: 199 --SIQVEPAVHPPLAPR 213


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.130    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,239,157
Number of Sequences: 219361
Number of extensions: 403732
Number of successful extensions: 1517
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1511
length of database: 80,573,946
effective HSP length: 97
effective length of database: 59,295,929
effective search space used: 1423102296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)