| Clone Name | bast48f02 |
|---|---|
| Clone Library Name | barley_pub |
>FOLD_SALTI (Q60006) FolD bifunctional protein [Includes:| Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)] Length = 287 Score = 88.6 bits (218), Expect = 3e-18 Identities = 52/104 (50%), Positives = 59/104 (56%) Frame = +3 Query: 75 AQIIDGKXXXXXXXXXXXXXXXXLSSAHSIVPGLAVVIVGSRKDSQTYVQMKRKACAEVG 254 A+IIDGK +A PGLAVV+VGS SQ YV KRKAC EVG Sbjct: 2 AKIIDGKTIAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSNPASQIYVASKRKACDEVG 61 Query: 255 IRSFDVDLPEDISEAALVAEVHRLNADPAVHGILVQLPLPKHIN 386 S DLPE SEA L+A + LNAD + GILVQLPLP I+ Sbjct: 62 FVSHSYDLPETTSEAELLALIDTLNADNTIDGILVQLPLPAGID 105
>FOLD_SALTY (P58688) FolD bifunctional protein [Includes:| Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)] Length = 287 Score = 87.8 bits (216), Expect = 6e-18 Identities = 52/104 (50%), Positives = 59/104 (56%) Frame = +3 Query: 75 AQIIDGKXXXXXXXXXXXXXXXXLSSAHSIVPGLAVVIVGSRKDSQTYVQMKRKACAEVG 254 A+IIDGK +A PGLAVV+VGS SQ YV KRKAC EVG Sbjct: 2 AKIIDGKTIAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSNPASQIYVASKRKACDEVG 61 Query: 255 IRSFDVDLPEDISEAALVAEVHRLNADPAVHGILVQLPLPKHIN 386 S DLPE SEA L+A + LNAD + GILVQLPLP I+ Sbjct: 62 FVSRSYDLPETTSEAELLALIDTLNADNTIDGILVQLPLPAGID 105
>FOLD_ECOLI (P24186) FolD bifunctional protein [Includes:| Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)] Length = 287 Score = 86.3 bits (212), Expect = 2e-17 Identities = 51/104 (49%), Positives = 58/104 (55%) Frame = +3 Query: 75 AQIIDGKXXXXXXXXXXXXXXXXLSSAHSIVPGLAVVIVGSRKDSQTYVQMKRKACAEVG 254 A+IIDGK +A PGLAVV+VGS SQ YV KRKAC EVG Sbjct: 2 AKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVG 61 Query: 255 IRSFDVDLPEDISEAALVAEVHRLNADPAVHGILVQLPLPKHIN 386 S DLPE SEA L+ + LNAD + GILVQLPLP I+ Sbjct: 62 FVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGID 105
>FOLD_STRTR (P96050) FolD bifunctional protein [Includes:| Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)] Length = 284 Score = 85.5 bits (210), Expect = 3e-17 Identities = 46/106 (43%), Positives = 57/106 (53%) Frame = +3 Query: 72 MAQIIDGKXXXXXXXXXXXXXXXXLSSAHSIVPGLAVVIVGSRKDSQTYVQMKRKACAEV 251 MA I+DGK L IVPGL V++VG SQ YV+ K +A + Sbjct: 1 MAIIMDGKALAVNMQEQLQEKVARLKEKEWIVPGLVVIMVGENPASQVYVRNKERAAKKA 60 Query: 252 GIRSFDVDLPEDISEAALVAEVHRLNADPAVHGILVQLPLPKHINE 389 G S V+L E ISE L+ + + N +P HGILVQLPLP HINE Sbjct: 61 GFHSKTVNLSESISEEELIEVIEKYNQNPLFHGILVQLPLPNHINE 106
>FOLD_HAEIN (P44313) FolD bifunctional protein [Includes:| Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)] Length = 281 Score = 83.2 bits (204), Expect = 1e-16 Identities = 43/75 (57%), Positives = 53/75 (70%) Frame = +3 Query: 168 PGLAVVIVGSRKDSQTYVQMKRKACAEVGIRSFDVDLPEDISEAALVAEVHRLNADPAVH 347 PGLAV++VG+ SQ YV KRK+C EVGI S DLPE ++ L+A + +LNAD + Sbjct: 33 PGLAVILVGADPASQIYVGNKRKSCEEVGILSKSYDLPETTTQNELLAIIDQLNADKNID 92 Query: 348 GILVQLPLPKHINEE 392 GILVQLPLPK IN E Sbjct: 93 GILVQLPLPKQINAE 107
>FOLD_PHOPO (P51696) FolD bifunctional protein (PPDC) [Includes:| Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)] Length = 285 Score = 82.4 bits (202), Expect = 2e-16 Identities = 48/100 (48%), Positives = 53/100 (53%) Frame = +3 Query: 75 AQIIDGKXXXXXXXXXXXXXXXXLSSAHSIVPGLAVVIVGSRKDSQTYVQMKRKACAEVG 254 AQIIDGK + A PGLAVV+VG SQ YV KRKAC EVG Sbjct: 3 AQIIDGKIISQTVRQEVAARVKARTDAGLRAPGLAVVLVGQDPASQIYVGSKRKACEEVG 62 Query: 255 IRSFDVDLPEDISEAALVAEVHRLNADPAVHGILVQLPLP 374 S DLP SE L+ + LN DP + GILVQLPLP Sbjct: 63 FISKSFDLPSSASEQQLLDLIDELNQDPTMDGILVQLPLP 102
>C1TC_YEAST (P07245) C-1-tetrahydrofolate synthase, cytoplasmic (C1-THF| synthase) [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9); Formyltetrahydrofolate synthetase (EC 6.3.4.3)] Length = 946 Score = 79.7 bits (195), Expect = 2e-15 Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 1/106 (0%) Frame = +3 Query: 78 QIIDGKXXXXXXXXXXXXXXXXLSS-AHSIVPGLAVVIVGSRKDSQTYVQMKRKACAEVG 254 Q++DGK + P LA++ VG+R DS TYV+MKRKA E G Sbjct: 4 QVLDGKACAQQFRSNIANEIKSIQGHVPGFAPNLAIIQVGNRPDSATYVRMKRKAAEEAG 63 Query: 255 IRSFDVDLPEDISEAALVAEVHRLNADPAVHGILVQLPLPKHINEE 392 I + + L E +E ++ V +LN DP HGI+VQLPLP H++E+ Sbjct: 64 IVANFIHLDESATEFEVLRYVDQLNEDPHTHGIIVQLPLPAHLDED 109
>FOLD_CHLPN (Q9Z8K3) FolD bifunctional protein [Includes:| Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)] Length = 286 Score = 79.0 bits (193), Expect = 3e-15 Identities = 38/75 (50%), Positives = 53/75 (70%) Frame = +3 Query: 168 PGLAVVIVGSRKDSQTYVQMKRKACAEVGIRSFDVDLPEDISEAALVAEVHRLNADPAVH 347 PGLAVV++G+ S+ YV MK K E+GI S LP D + ++++ + RLN DP++H Sbjct: 27 PGLAVVLIGNDPASEVYVGMKVKKATEIGIISKAHKLPSDSTLSSVLKLIERLNQDPSIH 86 Query: 348 GILVQLPLPKHINEE 392 GILVQLPLPKH++ E Sbjct: 87 GILVQLPLPKHLDSE 101
>C1TC_DROME (O96553) C-1-tetrahydrofolate synthase, cytoplasmic (C1-THF| synthase) [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9); Formyltetrahydrofolate synthetase (EC 6.3.4.3)] Length = 968 Score = 77.0 bits (188), Expect = 1e-14 Identities = 36/69 (52%), Positives = 49/69 (71%) Frame = +3 Query: 165 VPGLAVVIVGSRKDSQTYVQMKRKACAEVGIRSFDVDLPEDISEAALVAEVHRLNADPAV 344 VPGL +V VG R+DS Y++MK KA E+GI + V LP I+E L+ +++ LN DP V Sbjct: 69 VPGLRIVQVGGREDSNVYIRMKIKAATEIGIDAAHVQLPRSITEVELLDKINDLNEDPRV 128 Query: 345 HGILVQLPL 371 HGI+VQ+PL Sbjct: 129 HGIIVQMPL 137
>MTDC_DROME (Q04448) Bifunctional methylenetetrahydrofolate| dehydrogenase/cyclohydrolase, mitochondrial precursor (DNMDMC) [Includes: NAD-dependent methylenetetrahydrofolate dehydrogenase (EC 1.5.1.15); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) Length = 309 Score = 76.6 bits (187), Expect = 1e-14 Identities = 46/106 (43%), Positives = 55/106 (51%) Frame = +3 Query: 72 MAQIIDGKXXXXXXXXXXXXXXXXLSSAHSIVPGLAVVIVGSRKDSQTYVQMKRKACAEV 251 MAQIIDGK + +A P L VIVG S+ YV K AC EV Sbjct: 7 MAQIIDGKAIAQEVRTQLAHELKGMEAAGYPKPHLTAVIVGEDPASEKYVANKMVACREV 66 Query: 252 GIRSFDVDLPEDISEAALVAEVHRLNADPAVHGILVQLPLPKHINE 389 GI S LP ++ L+ + LN DP V GILVQLP+P+HINE Sbjct: 67 GISSETKRLPASTTQEELLQLIADLNKDPQVTGILVQLPVPEHINE 112
>FOLD_CHLTR (O84081) FolD bifunctional protein [Includes:| Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)] Length = 287 Score = 73.6 bits (179), Expect = 1e-13 Identities = 36/80 (45%), Positives = 53/80 (66%) Frame = +3 Query: 153 AHSIVPGLAVVIVGSRKDSQTYVQMKRKACAEVGIRSFDVDLPEDISEAALVAEVHRLNA 332 A S PGLAVV++G+ S+ YV MK K ++G+ S P D + + ++A +H+LN Sbjct: 22 ACSKAPGLAVVLIGNNPASEIYVNMKIKRATDLGMVSKSYRKPSDATLSDILALIHQLNN 81 Query: 333 DPAVHGILVQLPLPKHINEE 392 D +HGILVQLPLPKH++ + Sbjct: 82 DENIHGILVQLPLPKHLDAQ 101
>FOLD_CHLMU (Q9PKW1) FolD bifunctional protein [Includes:| Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)] Length = 287 Score = 71.2 bits (173), Expect = 5e-13 Identities = 32/75 (42%), Positives = 50/75 (66%) Frame = +3 Query: 168 PGLAVVIVGSRKDSQTYVQMKRKACAEVGIRSFDVDLPEDISEAALVAEVHRLNADPAVH 347 PGLAVV++G+ S+ YV MK K ++G+ S P D + + +++ +H LN D +H Sbjct: 27 PGLAVVLIGNNPASEIYVNMKVKRARDLGMISRSYRKPSDATLSDILSLIHELNCDENIH 86 Query: 348 GILVQLPLPKHINEE 392 G+LVQLPLPKH++ + Sbjct: 87 GVLVQLPLPKHLDTQ 101
>FOLD_BACSU (P54382) FolD bifunctional protein [Includes:| Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)] Length = 283 Score = 70.5 bits (171), Expect = 9e-13 Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 1/107 (0%) Frame = +3 Query: 75 AQIIDGKXXXXXXXXXXXXXXXXLSSAHSIVPGLAVVIVGSRKDSQTYVQMKRKACAEVG 254 A IIDGK L + PGLAV+++G S +YV+ K+KA +G Sbjct: 3 ATIIDGKETAREKREQLAKEVEELKK-QGVTPGLAVILIGDDPASHSYVRGKKKAAETMG 61 Query: 255 IRSFDVD-LPEDISEAALVAEVHRLNADPAVHGILVQLPLPKHINEE 392 + +F +D ++EA L++ + + N DP HGILVQLPLP HI+E+ Sbjct: 62 M-NFKLDQFDSSLTEAELLSIIDQYNQDPEFHGILVQLPLPDHISEK 107
>C1TM_YEAST (P09440) C-1-tetrahydrofolate synthase, mitochondrial precursor| (C1-THF synthase) [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9); Formyltetrahydrofolate synthetase (EC 6.3. Length = 975 Score = 70.5 bits (171), Expect = 9e-13 Identities = 31/74 (41%), Positives = 50/74 (67%) Frame = +3 Query: 168 PGLAVVIVGSRKDSQTYVQMKRKACAEVGIRSFDVDLPEDISEAALVAEVHRLNADPAVH 347 P L ++ VG+R DS TYV+MK KA + + LP +I+E L+ ++ +N D ++H Sbjct: 67 PTLKIIQVGARPDSSTYVRMKLKASKDSNVDCIIEKLPAEITEVELLKKISDINDDDSIH 126 Query: 348 GILVQLPLPKHINE 389 G+L+QLPLP+H++E Sbjct: 127 GLLIQLPLPRHLDE 140
>C1TC_SPOFR (Q27772) C-1-tetrahydrofolate synthase, cytoplasmic (C1-THF| synthase) [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9); Formyltetrahydrofolate synthetase (EC 6.3.4.3)] Length = 933 Score = 69.7 bits (169), Expect = 2e-12 Identities = 32/66 (48%), Positives = 45/66 (68%) Frame = +3 Query: 174 LAVVIVGSRKDSQTYVQMKRKACAEVGIRSFDVDLPEDISEAALVAEVHRLNADPAVHGI 353 LA+V VG R+DS Y++MK +A +GI + + LP DI+E L+A + LN P VHGI Sbjct: 37 LAIVQVGGREDSNVYIRMKLRAAENIGITAEHIQLPRDITETELLANITSLNESPYVHGI 96 Query: 354 LVQLPL 371 +VQ+PL Sbjct: 97 IVQMPL 102
>MTDC_MOUSE (P18155) Bifunctional methylenetetrahydrofolate| dehydrogenase/cyclohydrolase, mitochondrial precursor [Includes: NAD-dependent methylenetetrahydrofolate dehydrogenase (EC 1.5.1.15); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)] Length = 350 Score = 69.7 bits (169), Expect = 2e-12 Identities = 35/74 (47%), Positives = 48/74 (64%) Frame = +3 Query: 168 PGLAVVIVGSRKDSQTYVQMKRKACAEVGIRSFDVDLPEDISEAALVAEVHRLNADPAVH 347 P L+V++VG S +YV K +A AEVGI S + P +SE L+ + +LN D V Sbjct: 68 PHLSVILVGDNPASHSYVLNKTRAAAEVGINSETIVKPASVSEEELLNSIRKLNNDENVD 127 Query: 348 GILVQLPLPKHINE 389 G+LVQLPLP+HI+E Sbjct: 128 GLLVQLPLPEHIDE 141
>MTDC_CHICK (Q5ZKA5) Bifunctional methylenetetrahydrofolate| dehydrogenase/cyclohydrolase, mitochondrial precursor [Includes: NAD-dependent methylenetetrahydrofolate dehydrogenase (EC 1.5.1.15); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)] Length = 337 Score = 67.0 bits (162), Expect = 1e-11 Identities = 36/74 (48%), Positives = 48/74 (64%) Frame = +3 Query: 168 PGLAVVIVGSRKDSQTYVQMKRKACAEVGIRSFDVDLPEDISEAALVAEVHRLNADPAVH 347 P L+VV+VG S +YV K KA A+VGI S + P I+E L+ + +LN D V Sbjct: 63 PHLSVVLVGENPASHSYVLNKTKAAADVGISSETILKPASITEEELLDLISKLNNDANVD 122 Query: 348 GILVQLPLPKHINE 389 G+LVQLPLP+HI+E Sbjct: 123 GLLVQLPLPEHIDE 136
>FOLD_HELPY (P56467) FolD bifunctional protein [Includes:| Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)] Length = 290 Score = 66.6 bits (161), Expect = 1e-11 Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 1/74 (1%) Frame = +3 Query: 168 PGLAVVIVGSRKDSQTYVQMKRKACAEVGIRSFDVD-LPEDISEAALVAEVHRLNADPAV 344 P LAV++VG S TYV MK KAC VG+ FD+ L E+I+EA L++ + N D + Sbjct: 37 PKLAVILVGKDPASITYVNMKIKACERVGM-DFDLKTLQENITEAKLLSLIKDYNTDQNI 95 Query: 345 HGILVQLPLPKHIN 386 G+LVQLPLP+HI+ Sbjct: 96 SGVLVQLPLPRHID 109
>MTDC_HUMAN (P13995) Bifunctional methylenetetrahydrofolate| dehydrogenase/cyclohydrolase, mitochondrial precursor [Includes: NAD-dependent methylenetetrahydrofolate dehydrogenase (EC 1.5.1.15); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)] Length = 344 Score = 66.6 bits (161), Expect = 1e-11 Identities = 35/74 (47%), Positives = 48/74 (64%) Frame = +3 Query: 168 PGLAVVIVGSRKDSQTYVQMKRKACAEVGIRSFDVDLPEDISEAALVAEVHRLNADPAVH 347 P L+V++VG S +YV K +A A VGI S + P ISE L+ +++LN D V Sbjct: 62 PHLSVILVGENPASHSYVLNKTRAAAVVGINSETIMKPASISEEELLNLINKLNNDDNVD 121 Query: 348 GILVQLPLPKHINE 389 G+LVQLPLP+HI+E Sbjct: 122 GLLVQLPLPEHIDE 135
>C1TC_MOUSE (Q922D8) C-1-tetrahydrofolate synthase, cytoplasmic (C1-THF| synthase) [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9); Formyltetrahydrofolate synthetase (EC 6.3.4.3)] Length = 934 Score = 65.9 bits (159), Expect = 2e-11 Identities = 31/68 (45%), Positives = 45/68 (66%) Frame = +3 Query: 168 PGLAVVIVGSRKDSQTYVQMKRKACAEVGIRSFDVDLPEDISEAALVAEVHRLNADPAVH 347 PGLA++ VG R DS Y+ +K KA E+GI++ + LP +E+ ++ V LN D +VH Sbjct: 35 PGLAILQVGDRDDSNLYINVKLKAAEEIGIKATHIKLPRTSTESEVLKYVISLNEDASVH 94 Query: 348 GILVQLPL 371 G +VQLPL Sbjct: 95 GFIVQLPL 102
>C1TC_RAT (P27653) C-1-tetrahydrofolate synthase, cytoplasmic (C1-THF| synthase) [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9); Formyltetrahydrofolate synthetase (EC 6.3.4.3)] Length = 934 Score = 65.5 bits (158), Expect = 3e-11 Identities = 31/68 (45%), Positives = 44/68 (64%) Frame = +3 Query: 168 PGLAVVIVGSRKDSQTYVQMKRKACAEVGIRSFDVDLPEDISEAALVAEVHRLNADPAVH 347 PGLA++ VG R DS Y+ +K KA E+GI++ + LP +E+ ++ V LN D VH Sbjct: 35 PGLAILQVGDRDDSNLYINVKLKAAQEIGIKATHIKLPRTSTESEVLKYVISLNEDATVH 94 Query: 348 GILVQLPL 371 G +VQLPL Sbjct: 95 GFIVQLPL 102
>FOLD_BUCBP (Q89A92) FolD bifunctional protein [Includes:| Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)] Length = 287 Score = 64.7 bits (156), Expect = 5e-11 Identities = 31/75 (41%), Positives = 48/75 (64%) Frame = +3 Query: 168 PGLAVVIVGSRKDSQTYVQMKRKACAEVGIRSFDVDLPEDISEAALVAEVHRLNADPAVH 347 PGLAV+++GS S YV+ KR C +VG S ++I E+ ++ +++LN D + Sbjct: 34 PGLAVILIGSNSASTIYVKKKRFMCEQVGFISKFWKFSKNIQESKILNLIYKLNYDTTID 93 Query: 348 GILVQLPLPKHINEE 392 GILVQLP+P +IN + Sbjct: 94 GILVQLPIPPNINNQ 108
>C1TC_HUMAN (P11586) C-1-tetrahydrofolate synthase, cytoplasmic (C1-THF| synthase) [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9); Formyltetrahydrofolate synthetase (EC 6.3.4.3)] Length = 934 Score = 64.7 bits (156), Expect = 5e-11 Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 1/100 (1%) Frame = +3 Query: 75 AQIIDGKXXXXXXXXXXXXXXXXLSS-AHSIVPGLAVVIVGSRKDSQTYVQMKRKACAEV 251 A+I++GK L P LA++ VG+R DS Y+ +K KA E+ Sbjct: 3 AEILNGKEISAQIRARLKNQVTQLKEQVPGFTPRLAILQVGNRDDSNLYINVKLKAAEEI 62 Query: 252 GIRSFDVDLPEDISEAALVAEVHRLNADPAVHGILVQLPL 371 GI++ + LP +E+ ++ + LN D VHG LVQLPL Sbjct: 63 GIKATHIKLPRTTTESEVMKYITSLNEDSTVHGFLVQLPL 102
>FOLD_BUCAI (P57557) FolD bifunctional protein [Includes:| Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)] Length = 285 Score = 64.3 bits (155), Expect = 7e-11 Identities = 31/74 (41%), Positives = 48/74 (64%) Frame = +3 Query: 165 VPGLAVVIVGSRKDSQTYVQMKRKACAEVGIRSFDVDLPEDISEAALVAEVHRLNADPAV 344 +PGLA+++VG+ SQ YV K+ +C VG S +LP +I+E ++ + +LN + + Sbjct: 33 IPGLAMILVGNHIPSQIYVNKKKISCKNVGFFSECWNLPSNINEKEILNIISKLNENKNI 92 Query: 345 HGILVQLPLPKHIN 386 GIL+QLPLP IN Sbjct: 93 DGILIQLPLPPQIN 106
>FOLD_HELPJ (Q9ZLQ4) FolD bifunctional protein [Includes:| Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)] Length = 290 Score = 63.5 bits (153), Expect = 1e-10 Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 1/74 (1%) Frame = +3 Query: 168 PGLAVVIVGSRKDSQTYVQMKRKACAEVGIRSFDVD-LPEDISEAALVAEVHRLNADPAV 344 P LAV++VG S TYV MK KAC VG+ FD+ L E+I+EA L++ + N D + Sbjct: 37 PKLAVILVGKDPASITYVNMKIKACQRVGM-DFDLKTLKENITEAELLSLIKDYNTDQNI 95 Query: 345 HGILVQLPLPKHIN 386 GILVQLPLP+ I+ Sbjct: 96 SGILVQLPLPRSID 109
>FOLD_RICCN (Q92HY4) FolD bifunctional protein [Includes:| Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)] Length = 288 Score = 61.6 bits (148), Expect = 4e-10 Identities = 36/106 (33%), Positives = 55/106 (51%) Frame = +3 Query: 72 MAQIIDGKXXXXXXXXXXXXXXXXLSSAHSIVPGLAVVIVGSRKDSQTYVQMKRKACAEV 251 M IIDGK L+S + P LA+V+VG S YV+ K K ++ Sbjct: 1 MNNIIDGKALANEILADLKLEIQELTSQTNASPKLAIVLVGDNPASIIYVRHKIKNAHKI 60 Query: 252 GIRSFDVDLPEDISEAALVAEVHRLNADPAVHGILVQLPLPKHINE 389 GI + ++L I L+++++ LN D + GI+VQLPLP I++ Sbjct: 61 GIYTLLINLSATIHTNDLISKINELNLDNEISGIIVQLPLPSSIDK 106
>FOLD_RICPR (Q9ZD32) FolD bifunctional protein [Includes:| Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)] Length = 286 Score = 60.8 bits (146), Expect = 7e-10 Identities = 36/103 (34%), Positives = 50/103 (48%) Frame = +3 Query: 81 IIDGKXXXXXXXXXXXXXXXXLSSAHSIVPGLAVVIVGSRKDSQTYVQMKRKACAEVGIR 260 IIDGK P LA+V+VG S YV+ K K +VGI Sbjct: 5 IIDGKALANEILADLKLEIQGFKEKTKTSPKLAIVLVGDNPASMIYVKNKIKNAHQVGID 64 Query: 261 SFDVDLPEDISEAALVAEVHRLNADPAVHGILVQLPLPKHINE 389 + V+L +I L+ +++ LN D + GI+VQLPLP I+E Sbjct: 65 TLLVNLSTNIYTDDLILKINELNLDKGISGIIVQLPLPSSIDE 107
>FOLD_BUCAP (Q8K979) FolD bifunctional protein [Includes:| Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)] Length = 285 Score = 60.5 bits (145), Expect = 1e-09 Identities = 29/74 (39%), Positives = 45/74 (60%) Frame = +3 Query: 165 VPGLAVVIVGSRKDSQTYVQMKRKACAEVGIRSFDVDLPEDISEAALVAEVHRLNADPAV 344 +PGLAV+++G S+ YV+ K C +VG S P ++ E ++ + +LN + + Sbjct: 33 IPGLAVILIGKNPASEIYVKRKISVCKKVGFISKYWSFPINVDEKDILNLIEKLNNNINI 92 Query: 345 HGILVQLPLPKHIN 386 GILVQLP+PK IN Sbjct: 93 DGILVQLPIPKQIN 106
>FOLD_MYCPN (P75096) FolD bifunctional protein [Includes:| Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)] Length = 269 Score = 48.1 bits (113), Expect = 5e-06 Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 2/72 (2%) Frame = +3 Query: 180 VVIVGSRKD--SQTYVQMKRKACAEVGIRSFDVDLPEDISEAALVAEVHRLNADPAVHGI 353 +VI+ + D S +++ K AC +G +S + E ++E L+ ++ +LN DP V GI Sbjct: 26 LVILQTNNDVSSDAFIRQKMNACNTLGAQSELIKYHESVTEKELLEKIQQLNTDPEVTGI 85 Query: 354 LVQLPLPKHINE 389 ++QLP+ H+ + Sbjct: 86 ILQLPVYPHLKQ 97
>FOLD_MYCGE (P47259) FolD bifunctional protein [Includes:| Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)] Length = 273 Score = 45.1 bits (105), Expect = 4e-05 Identities = 22/72 (30%), Positives = 41/72 (56%) Frame = +3 Query: 174 LAVVIVGSRKDSQTYVQMKRKACAEVGIRSFDVDLPEDISEAALVAEVHRLNADPAVHGI 353 L ++ S ++++ K AC VG +S + L I++A L+ ++ LN D V GI Sbjct: 26 LVIIQANDDDSSDSFIKQKLIACNTVGAKSELIKLSNQITQAELIEKIISLNHDVNVTGI 85 Query: 354 LVQLPLPKHINE 389 ++QLP+ H+++ Sbjct: 86 ILQLPVYPHLDK 97
>FOLD_THEAC (Q05213) Probable folD bifunctional protein [Includes:| Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)] Length = 276 Score = 43.1 bits (100), Expect = 2e-04 Identities = 21/70 (30%), Positives = 41/70 (58%) Frame = +3 Query: 168 PGLAVVIVGSRKDSQTYVQMKRKACAEVGIRSFDVDLPEDISEAALVAEVHRLNADPAVH 347 P L ++ +G + + Y + K + ++GI + D++ +DIS L+ + L DP ++ Sbjct: 28 PSLKLIQIGDNEAASIYARAKIRRGKKIGI-AVDLEKYDDISMKDLLKRIDDLAKDPQIN 86 Query: 348 GILVQLPLPK 377 GI+++ PLPK Sbjct: 87 GIMIENPLPK 96
>METK_PINBN (P50300) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine| adenosyltransferase) (AdoMet synthetase) Length = 393 Score = 30.0 bits (66), Expect = 1.4 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = +3 Query: 216 YVQMKRKACAEVGIRSFDVDLPEDISEAALVAEVHRLNADPAVHGILVQLP 368 Y Q+ RK C E+G S DV L D + + E + VHG + P Sbjct: 65 YEQIVRKTCREIGFISDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP 115
>GCSP_RHOS4 (Q3J4D4) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)| (Glycine decarboxylase) (Glycine cleavage system P-protein) Length = 956 Score = 28.9 bits (63), Expect = 3.1 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = -2 Query: 202 FLLPTITTASPGTMLWADESAATSAAISRLISAAMALPSMICAI 71 F PT++ PGT++ + T A I R ++A +A+ I A+ Sbjct: 835 FHAPTMSWPVPGTLMVEPTESETKAEIDRFVAALLAIREEIRAV 878
>ISPH_PROMA (Q7VDS2) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC| 1.17.1.2) Length = 405 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = +3 Query: 174 LAVVIVGSRKDSQTYVQMKRKACAEVGIRSFDVDLPEDISE 296 L VVI G + T++Q + GIRSF +D PE I E Sbjct: 308 LLVVIGGFNSSNTTHLQ---EIALAKGIRSFHIDTPERIGE 345
>SRFAB_BACSU (Q04747) Surfactin synthetase subunit 2| Length = 3587 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/55 (30%), Positives = 25/55 (45%) Frame = +3 Query: 198 RKDSQTYVQMKRKACAEVGIRSFDVDLPEDISEAALVAEVHRLNADPAVHGILVQ 362 R+ S+ +V + + A A +R DVDL AAL+ E H A L + Sbjct: 1449 RRWSRHFVNIIKAAAANPNVRLSDVDLLSSAETAALLEERHMTQITEATFAALFE 1503
>RRFM_RAT (Q5RKI9) Ribosome recycling factor, mitochondrial precursor| Length = 262 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/57 (29%), Positives = 26/57 (45%) Frame = +3 Query: 219 VQMKRKACAEVGIRSFDVDLPEDISEAALVAEVHRLNADPAVHGILVQLPLPKHINE 389 + MK V + SF PE + A +N +P V G L+++P+PK E Sbjct: 136 ISMKSPQLILVNMASF----PECTAAAIKAIRESGMNLNPEVEGTLIRVPIPKVTRE 188
>RRFM_MOUSE (Q9D6S7) Ribosome recycling factor, mitochondrial precursor| Length = 262 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/57 (29%), Positives = 26/57 (45%) Frame = +3 Query: 219 VQMKRKACAEVGIRSFDVDLPEDISEAALVAEVHRLNADPAVHGILVQLPLPKHINE 389 + MK V + SF PE + A +N +P V G L+++P+PK E Sbjct: 136 ISMKSPQVILVNMASF----PECTAAAIKAIRESGMNLNPEVEGTLIRVPIPKVTRE 188
>NRDJ_BDEBA (Q6MNP6) Vitamin B12-dependent ribonucleotide reductase (EC| 1.17.4.1) (Ribonucleoside-diphosphate reductase nrdJ) Length = 764 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/53 (30%), Positives = 27/53 (50%) Frame = +3 Query: 165 VPGLAVVIVGSRKDSQTYVQMKRKACAEVGIRSFDVDLPEDISEAALVAEVHR 323 V +AV GS++ ++ K K EVG+ +F + PE S+ L + +R Sbjct: 701 VKAVAVYRDGSKQSQPLNLKEKPKVVEEVGVPNFTMKCPECGSDTVLTSGCYR 753
>MDTA_ECOLI (P76397) Multidrug resistance protein mdtA precursor (Multidrug| transporter mdtA) Length = 415 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = -1 Query: 368 WKLNKNTVDGGVGVEAVDLGDERGLGDVLGEV 273 W VDG VG++ VD+G++ GD G V Sbjct: 195 WSRITAPVDGRVGLKQVDVGNQISSGDTTGIV 226
>MDTA_ECOL6 (Q8CVX8) Multidrug resistance protein mdtA precursor (Multidrug| transporter mdtA) Length = 415 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = -1 Query: 368 WKLNKNTVDGGVGVEAVDLGDERGLGDVLGEV 273 W VDG VG++ VD+G++ GD G V Sbjct: 195 WSRITAPVDGRVGLKQVDVGNQISSGDTTGIV 226
>MDTA_ECO57 (Q8X7J5) Multidrug resistance protein mdtA precursor (Multidrug| transporter mdtA) Length = 415 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = -1 Query: 368 WKLNKNTVDGGVGVEAVDLGDERGLGDVLGEV 273 W VDG VG++ VD+G++ GD G V Sbjct: 195 WSRITAPVDGRVGLKQVDVGNQISSGDTTGIV 226
>YKGF_ECOLI (P77536) Putative electron transport protein ykgF| Length = 475 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/67 (22%), Positives = 31/67 (46%) Frame = +3 Query: 180 VVIVGSRKDSQTYVQMKRKACAEVGIRSFDVDLPEDISEAALVAEVHRLNADPAVHGILV 359 ++ V RK+++ V+ K E+G+ D + E L + +L+ DP H ++ Sbjct: 97 ILQVAQRKNARKVVKSKSMVTEEIGVNHVLQDAGIQVIETDLGEYILQLDQDPPSHVVVP 156 Query: 360 QLPLPKH 380 + +H Sbjct: 157 AIHKDRH 163
>IF2_LACLA (P58002) Translation initiation factor IF-2| Length = 944 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +3 Query: 264 FDVDLPEDISEAALVAEVHRLNADPAVHGI 353 F+ +L E + LVAEV L ADP V I Sbjct: 593 FNQNLDELLDTVLLVAEVQELKADPTVRAI 622
>GCSP_SYNEL (Q8DII3) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)| (Glycine decarboxylase) (Glycine cleavage system P-protein) Length = 954 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/44 (31%), Positives = 22/44 (50%) Frame = -2 Query: 202 FLLPTITTASPGTMLWADESAATSAAISRLISAAMALPSMICAI 71 F PT++ PGT++ + T A + R A +A+ S I I Sbjct: 837 FHAPTVSWPVPGTLMIEPTESETKAELDRFCEAMIAIRSEIAEI 880
>MDTA_SHIFL (Q83KI5) Putative multidrug resistance protein mdtA (Multidrug| transporter mdtA) Length = 350 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = -1 Query: 368 WKLNKNTVDGGVGVEAVDLGDERGLGDVLGEV 273 W VDG VG++ VD+G++ GD G V Sbjct: 130 WSRITAPVDGRVGLKQVDVGNQISSGDTTGIV 161
>TBX10_HUMAN (O75333) T-box transcription factor TBX10 (T-box protein 10)| Length = 385 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = +3 Query: 144 LSSAHSIVPGLAVVIVGSRKDSQTYVQMKRKA 239 L+S H P VV V RKDS+ Y Q K+ Sbjct: 186 LNSMHRYQPRFHVVFVDPRKDSERYAQENFKS 217
>ISPH_SYNPX (Q7U9K4) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC| 1.17.1.2) Length = 399 Score = 27.3 bits (59), Expect = 9.0 Identities = 18/52 (34%), Positives = 25/52 (48%) Frame = +3 Query: 174 LAVVIVGSRKDSQTYVQMKRKACAEVGIRSFDVDLPEDISEAALVAEVHRLN 329 L VVI G + T++Q + GIRSF +D P+ + A E LN Sbjct: 308 LMVVIGGFNSSNTTHLQ---EIALSRGIRSFHIDTPDRLDAQANAIEHKPLN 356
>ISPH_PROMM (Q7V4T7) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC| 1.17.1.2) Length = 398 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = +3 Query: 174 LAVVIVGSRKDSQTYVQMKRKACAEVGIRSFDVDLPEDISE 296 L VVI G + T++Q + GIRSF +D PE I + Sbjct: 308 LLVVIGGFNSSNTTHLQ---EIAISRGIRSFHIDTPERIGD 345
>GATA_MYCTU (O53258) Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-)| (Glu-ADT subunit A) Length = 494 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = -2 Query: 154 ADESAATSAAISRLISAAMALPSMICAIGVA 62 ADE+ A +AAI + ++A LPS + + +A Sbjct: 49 ADEALAAAAAIDKQVAAGEPLPSALAGVPLA 79 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,801,019 Number of Sequences: 219361 Number of extensions: 404114 Number of successful extensions: 1777 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 1762 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1777 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)