ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast48e05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
2dbj|AP003514.3| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
3ref|XM_518717.1| PREDICTED: Pan troglodytes similar to G protein... 44 0.36
4ref|XM_524954.1| PREDICTED: Pan troglodytes LOC469571 (LOC469571... 44 0.36
5ref|NM_153832.1| Homo sapiens G protein-coupled receptor 161 (GP... 44 0.36
6ref|NM_007369.1| Homo sapiens G protein-coupled receptor 161 (GP... 44 0.36
7gb|BC028163.1| Homo sapiens G protein-coupled receptor 161, mRNA... 44 0.36
8emb|AL033532.36|HS745I14 Human DNA sequence from clone RP4-745I1... 44 0.36
9dbj|AK122656.1| Homo sapiens cDNA FLJ16090 fis, clone OCBBF20013... 44 0.36
10dbj|AK056040.1| Homo sapiens cDNA FLJ31478 fis, clone NT2NE20016... 44 0.36
11gb|AY275468.1| Homo sapiens G-protein coupled receptor RE2 mRNA,... 44 0.36
12dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 44 0.36
13gb|AF091890.1|AF091890 Homo sapiens G-protein coupled receptor R... 44 0.36
14ref|XM_470870.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.4
15gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 42 1.4
16gb|AC091787.6| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
17gb|AC079853.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
18gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 42 1.4
19gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.4
20gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosom... 42 1.4
21emb|AL162419.34| Human DNA sequence from clone RP11-358M14 on ch... 42 1.4
22dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
23dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.4
24ref|XM_463926.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.7
25gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 5.7
26gb|AY336802.1| Uncultured bacterium clone G840-1B putative dissi... 40 5.7
27gb|AY303773.1| Cavia porcellus CD8 alpha mRNA, complete cds 40 5.7
28emb|X79146.1|SLLINC S.lincolnensis (78-11) Lincomycin production... 40 5.7
29emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete ... 40 5.7
30emb|BX640434.1| Bordetella parapertussis strain 12822, complete ... 40 5.7
31emb|BX640420.1| Bordetella pertussis strain Tohama I, complete g... 40 5.7
32gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 5.7
33gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 5.7
34dbj|AK082922.1| Mus musculus 7 days embryo whole body cDNA, RIKE... 40 5.7
35dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
36dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
37gb|AC008186.5|AC008186 Drosophila melanogaster, chromosome 2R, r... 40 5.7
38ref|XM_341542.2| PREDICTED: Rattus norvegicus cullin 2 (predicte... 40 5.7
39dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 5.7
40dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
41dbj|AP005098.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
42dbj|AK071600.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.7
43gb|AE003834.3| Drosophila melanogaster chromosome 2R, section 16... 40 5.7
44emb|AL049871.4|CNS0000U Human chromosome 14 DNA sequence BAC R-6... 40 5.7
45gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 5.7
46emb|AL137191.5|CNS01DWH Human chromosome 14 DNA sequence BAC R-1... 40 5.7
47emb|AL732475.6| Mouse DNA sequence from clone RP23-202H24 on chr... 40 5.7 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                           
Query: 164     cgtccacgccatctgcggcaccaccccgcacccggcgtcctgcctcgcgtcggccgccgt 223
               |||||| ||| ||||| |||| || ||||||| ||  ||||||||||||||| | |||| 
Sbjct: 4711536 cgtccatgccgtctgccgcacgacgccgcaccaggactcctgcctcgcgtcgacggccgc 4711595

                             
Query: 224     gcacctcgacgccg 237
               ||||||||||||||
Sbjct: 4711596 gcacctcgacgccg 4711609
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>dbj|AP003514.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0698A06
          Length = 156514

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                         
Query: 164   cgtccacgccatctgcggcaccaccccgcacccggcgtcctgcctcgcgtcggccgccgt 223
             |||||| ||| ||||| |||| || ||||||| ||  ||||||||||||||| | |||| 
Sbjct: 74135 cgtccatgccgtctgccgcacgacgccgcaccaggactcctgcctcgcgtcgacggccgc 74194

                           
Query: 224   gcacctcgacgccg 237
             ||||||||||||||
Sbjct: 74195 gcacctcgacgccg 74208
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>ref|XM_518717.1| PREDICTED: Pan troglodytes similar to G protein-coupled receptor
           161; G-protein coupled receptor (LOC462973), mRNA
          Length = 1425

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 56  cctcatctccatcctggtggtcctcg 81
           ||||||| ||||||||||||||||||
Sbjct: 639 cctcatcaccatcctggtggtcctcg 664
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>ref|XM_524954.1| PREDICTED: Pan troglodytes LOC469571 (LOC469571), mRNA
          Length = 2259

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 56  cctcatctccatcctggtggtcctcg 81
           ||||||| ||||||||||||||||||
Sbjct: 951 cctcatcaccatcctggtggtcctcg 976
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>ref|NM_153832.1| Homo sapiens G protein-coupled receptor 161 (GPR161), transcript
            variant 2, mRNA
          Length = 2733

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 56   cctcatctccatcctggtggtcctcg 81
            ||||||| ||||||||||||||||||
Sbjct: 1118 cctcatcaccatcctggtggtcctcg 1143
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>ref|NM_007369.1| Homo sapiens G protein-coupled receptor 161 (GPR161), transcript
           variant 1, mRNA
          Length = 1382

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 56  cctcatctccatcctggtggtcctcg 81
           ||||||| ||||||||||||||||||
Sbjct: 864 cctcatcaccatcctggtggtcctcg 889
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>gb|BC028163.1| Homo sapiens G protein-coupled receptor 161, mRNA (cDNA clone
            MGC:39957 IMAGE:5246359), complete cds
          Length = 2733

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 56   cctcatctccatcctggtggtcctcg 81
            ||||||| ||||||||||||||||||
Sbjct: 1118 cctcatcaccatcctggtggtcctcg 1143
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>emb|AL033532.36|HS745I14 Human DNA sequence from clone RP4-745I14 on chromosome 1q23.1-24.3
             Contains the 3' end of a novel gene, the GPR161 gene for G
             protein-coupled receptor 161 and one CpG island, complete
             sequence
          Length = 81631

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 56    cctcatctccatcctggtggtcctcg 81
             ||||||| ||||||||||||||||||
Sbjct: 25640 cctcatcaccatcctggtggtcctcg 25615
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>dbj|AK122656.1| Homo sapiens cDNA FLJ16090 fis, clone OCBBF2001323, highly  similar
            to Homo sapiens G-protein coupled receptor RE2 mRNA
          Length = 2400

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 56   cctcatctccatcctggtggtcctcg 81
            ||||||| ||||||||||||||||||
Sbjct: 1361 cctcatcaccatcctggtggtcctcg 1386
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>dbj|AK056040.1| Homo sapiens cDNA FLJ31478 fis, clone NT2NE2001626, highly similar
           to Homo sapiens G-protein coupled receptor RE2 mRNA
          Length = 1985

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 56  cctcatctccatcctggtggtcctcg 81
           ||||||| ||||||||||||||||||
Sbjct: 935 cctcatcaccatcctggtggtcctcg 960
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>gb|AY275468.1| Homo sapiens G-protein coupled receptor RE2 mRNA, complete cds
          Length = 1590

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 56  cctcatctccatcctggtggtcctcg 81
           ||||||| ||||||||||||||||||
Sbjct: 804 cctcatcaccatcctggtggtcctcg 829
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 179     cggcaccaccccgcacccggcg 200
               ||||||||||||||||||||||
Sbjct: 6490758 cggcaccaccccgcacccggcg 6490779
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>gb|AF091890.1|AF091890 Homo sapiens G-protein coupled receptor RE2 mRNA, complete cds
          Length = 1382

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 56  cctcatctccatcctggtggtcctcg 81
           ||||||| ||||||||||||||||||
Sbjct: 864 cctcatcaccatcctggtggtcctcg 889
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>ref|XM_470870.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 414

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 153 ccgctggccgccgtccacgccatct 177
           |||||||||||||||| ||||||||
Sbjct: 129 ccgctggccgccgtcctcgccatct 105
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 214    cggccgccgtgcacctcgacgccgc 238
              |||||||||||| ||||||||||||
Sbjct: 986873 cggccgccgtgcgcctcgacgccgc 986849
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>gb|AC091787.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0087G11,
              complete sequence
          Length = 169728

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 153    ccgctggccgccgtccacgccatct 177
              |||||||||||||||| ||||||||
Sbjct: 163157 ccgctggccgccgtcctcgccatct 163181
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>gb|AC079853.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0004M10,
              complete sequence
          Length = 152423

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 153    ccgctggccgccgtccacgccatct 177
              |||||||||||||||| ||||||||
Sbjct: 149060 ccgctggccgccgtcctcgccatct 149036
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 67     tcctggtggtcctcgtcgccaccgc 91
              ||||| |||||||||||||||||||
Sbjct: 513773 tcctgctggtcctcgtcgccaccgc 513749
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 151      caccgctggccgccgtccacg 171
                |||||||||||||||||||||
Sbjct: 31038981 caccgctggccgccgtccacg 31038961



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 153      ccgctggccgccgtccacgccatct 177
                |||||||||||||||| ||||||||
Sbjct: 15887260 ccgctggccgccgtcctcgccatct 15887236



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 379     cgtcgtcctcgacaacgccgctgcggcg 406
               |||||||||||||| |||||| ||||||
Sbjct: 5128527 cgtcgtcctcgacaccgccgcggcggcg 5128500
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>gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01
             genomic sequence, complete sequence
          Length = 168759

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 151   caccgctggccgccgtccacg 171
             |||||||||||||||||||||
Sbjct: 57083 caccgctggccgccgtccacg 57103
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>emb|AL162419.34| Human DNA sequence from clone RP11-358M14 on chromosome 9 Contains the
             5' end of a variant of a novel gene (FLJ90578) and a CpG
             island, complete sequence
          Length = 174535

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 49    cacctctcctcatctccatcc 69
             |||||||||||||||||||||
Sbjct: 85438 cacctctcctcatctccatcc 85418



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 49    cacctctcctcatctccatcc 69
             |||||||||||||||||||||
Sbjct: 85405 cacctctcctcatctccatcc 85385
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 151      caccgctggccgccgtccacg 171
                |||||||||||||||||||||
Sbjct: 31129504 caccgctggccgccgtccacg 31129484



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 153      ccgctggccgccgtccacgccatct 177
                |||||||||||||||| ||||||||
Sbjct: 15881794 ccgctggccgccgtcctcgccatct 15881770



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 379     cgtcgtcctcgacaacgccgctgcggcg 406
               |||||||||||||| |||||| ||||||
Sbjct: 5127744 cgtcgtcctcgacaccgccgcggcggcg 5127717
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 72      gtggtcctcgtcgccaccgcc 92
               |||||||||||||||||||||
Sbjct: 4306357 gtggtcctcgtcgccaccgcc 4306377
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>ref|XM_463926.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 840

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 153 ccgctggccgccgtccacgccatc 176
           ||||| ||||||||||||||||||
Sbjct: 13  ccgctcgccgccgtccacgccatc 36
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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 226     acctcgacgccgccacggcc 245
               ||||||||||||||||||||
Sbjct: 4654137 acctcgacgccgccacggcc 4654118
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>gb|AY336802.1| Uncultured bacterium clone G840-1B putative dissimilatory nitrite
           reductase (nirS) gene, partial cds
          Length = 873

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 179 cggcaccaccccgcacccgg 198
           ||||||||||||||||||||
Sbjct: 362 cggcaccaccccgcacccgg 381
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>gb|AY303773.1| Cavia porcellus CD8 alpha mRNA, complete cds
          Length = 1330

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 228 ctcgacgccgccacggccca 247
           ||||||||||||||||||||
Sbjct: 152 ctcgacgccgccacggccca 171
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>emb|X79146.1|SLLINC S.lincolnensis (78-11) Lincomycin production genes
          Length = 36270

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 218   cgccgtgcacctcgacgccg 237
             ||||||||||||||||||||
Sbjct: 14770 cgccgtgcacctcgacgccg 14789
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>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16
          Length = 348074

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 394    cgccgctgcggcgaggcgccgcgc 417
              |||||||||||| |||||||||||
Sbjct: 283636 cgccgctgcggccaggcgccgcgc 283659
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>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14
          Length = 344805

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 394    cgccgctgcggcgaggcgccgcgc 417
              |||||||||||| |||||||||||
Sbjct: 227866 cgccgctgcggccaggcgccgcgc 227889
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>emb|BX640420.1| Bordetella pertussis strain Tohama I, complete genome; segment 10/12
          Length = 348134

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 394   cgccgctgcggcgaggcgccgcgc 417
             |||||||||||| |||||||||||
Sbjct: 83707 cgccgctgcggccaggcgccgcgc 83730
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>gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0058P18, from chromosome 3, complete sequence
          Length = 155037

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 379   cgtcgtcctcgacaacgccgctgcggcg 406
             |||||||||||||| |||||| ||||||
Sbjct: 41178 cgtcgtcctcgacaccgccgcggcggcg 41205
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>gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0091J11, from chromosome 3, complete sequence
          Length = 181163

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 379    cgtcgtcctcgacaacgccgctgcggcg 406
              |||||||||||||| |||||| ||||||
Sbjct: 127991 cgtcgtcctcgacaccgccgcggcggcg 128018
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>dbj|AK082922.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:C430020E23 product:PIRIN homolog
            [Mus musculus], full insert sequence
          Length = 2917

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 50   acctctcctcatctccatcc 69
            ||||||||||||||||||||
Sbjct: 2623 acctctcctcatctccatcc 2642
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 153     ccgctggccgccgtccacgccatctgcg 180
               |||| ||||||||||| |||||||||||
Sbjct: 6077392 ccgccggccgccgtcctcgccatctgcg 6077419
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 153     ccgctggccgccgtccacgccatc 176
               ||||| ||||||||||||||||||
Sbjct: 1186238 ccgctcgccgccgtccacgccatc 1186215
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>gb|AC008186.5|AC008186 Drosophila melanogaster, chromosome 2R, region 45A-46A, BAC clone
             BACR10M14, complete sequence
          Length = 189757

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 85    ccaccgccaccacaacccaatgccgccc 112
             ||||||||||||| ||||||| ||||||
Sbjct: 60529 ccaccgccaccactacccaatcccgccc 60556
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>ref|XM_341542.2| PREDICTED: Rattus norvegicus cullin 2 (predicted) (Cul2_predicted),
           mRNA
          Length = 3780

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 389 gacaacgccgctgcggcgaggcgc 412
           ||||| ||||||||||||||||||
Sbjct: 119 gacaaggccgctgcggcgaggcgc 96
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 228    ctcgacgccgccacggcccatctc 251
              ||||||||||||||||||| ||||
Sbjct: 777030 ctcgacgccgccacggcccctctc 777053
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>dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0575F10
          Length = 150462

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 153   ccgctggccgccgtccacgccatc 176
             ||||| ||||||||||||||||||
Sbjct: 17329 ccgctcgccgccgtccacgccatc 17306
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>dbj|AP005098.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0008C11
          Length = 157205

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 153    ccgctggccgccgtccacgccatctgcg 180
              |||| ||||||||||| |||||||||||
Sbjct: 132562 ccgccggccgccgtcctcgccatctgcg 132589
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>dbj|AK071600.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105E08, full
           insert sequence
          Length = 627

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 379 cgtcgtcctcgacaacgccgctgcggcg 406
           |||||||||||||| |||||| ||||||
Sbjct: 18  cgtcgtcctcgacaccgccgcggcggcg 45
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>gb|AE003834.3| Drosophila melanogaster chromosome 2R, section 16 of 73 of the complete
             sequence
          Length = 243313

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 85    ccaccgccaccacaacccaatgccgccc 112
             ||||||||||||| ||||||| ||||||
Sbjct: 67371 ccaccgccaccactacccaatcccgccc 67398
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>emb|AL049871.4|CNS0000U Human chromosome 14 DNA sequence BAC R-696D21 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 169650

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 265   tcaccgcccccctcctcccc 284
             ||||||||||||||||||||
Sbjct: 32585 tcaccgcccccctcctcccc 32604
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 218     cgccgtgcacctcgacgccg 237
               ||||||||||||||||||||
Sbjct: 1789133 cgccgtgcacctcgacgccg 1789114
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>emb|AL137191.5|CNS01DWH Human chromosome 14 DNA sequence BAC R-1112J20 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 152510

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   tcaccgcccccctcctcccc 284
             ||||||||||||||||||||
Sbjct: 26077 tcaccgcccccctcctcccc 26058
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>emb|AL732475.6| Mouse DNA sequence from clone RP23-202H24 on chromosome X, complete
             sequence
          Length = 165720

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    acctctcctcatctccatcc 69
             ||||||||||||||||||||
Sbjct: 34639 acctctcctcatctccatcc 34658


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,556,884
Number of Sequences: 3902068
Number of extensions: 2556884
Number of successful extensions: 66867
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65557
Number of HSP's gapped (non-prelim): 1310
length of query: 422
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 400
effective length of database: 17,147,199,772
effective search space: 6858879908800
effective search space used: 6858879908800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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