ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast48e04 |
|---|---|
| Clone Library Name | barley_pub |
>OPR1_ARATH (Q8LAH7) 12-oxophytodienoate reductase 1 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 1) (OPDA-reductase 1) (AtOPR1) (FS-AT-I) Length = 372 Score = 110 bits (275), Expect = 9e-25 Identities = 52/66 (78%), Positives = 59/66 (89%) Frame = +3 Query: 81 AKEAIPLLTPHKMGQFELSHRVVLAPLTRCRSYANVPQPHAAVYYSQRATKGGLLISEAT 260 AK+++PLLTP+KMG+F LSHRVVLAPLTR RSY NVPQPHAA+YYSQR T GG LI+EAT Sbjct: 6 AKQSVPLLTPYKMGRFNLSHRVVLAPLTRQRSYGNVPQPHAAIYYSQRTTPGGFLITEAT 65 Query: 261 GVSPTA 278 GVS TA Sbjct: 66 GVSDTA 71
>OPR2_ARATH (Q8GYB8) 12-oxophytodienoate reductase 2 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 2) (OPDA-reductase 2) (AtOPR2) Length = 374 Score = 103 bits (256), Expect = 1e-22 Identities = 48/66 (72%), Positives = 58/66 (87%) Frame = +3 Query: 81 AKEAIPLLTPHKMGQFELSHRVVLAPLTRCRSYANVPQPHAAVYYSQRATKGGLLISEAT 260 AK+++PLLTP+KMG+F LSHRVVLAPLTR +SY +VPQPHA +YYSQR + GG LI+EAT Sbjct: 8 AKQSVPLLTPYKMGRFNLSHRVVLAPLTRQKSYGSVPQPHAILYYSQRTSPGGFLIAEAT 67 Query: 261 GVSPTA 278 GVS TA Sbjct: 68 GVSDTA 73
>OPRL2_ARATH (Q9C5W1) Putative 12-oxophytodienoate reductase-like protein 2 (EC| 1.3.1.-) Length = 269 Score = 95.9 bits (237), Expect = 2e-20 Identities = 46/68 (67%), Positives = 55/68 (80%) Frame = +3 Query: 75 MVAKEAIPLLTPHKMGQFELSHRVVLAPLTRCRSYANVPQPHAAVYYSQRATKGGLLISE 254 M K++IPLL P+KMG F LSHRVVLAPLTR RSY N+PQP+A +YY+QR T GGLLISE Sbjct: 1 METKQSIPLLMPYKMGPFNLSHRVVLAPLTRSRSYGNIPQPNAKLYYTQRTTPGGLLISE 60 Query: 255 ATGVSPTA 278 + VS T+ Sbjct: 61 SCVVSETS 68
>OPR1_LYCES (Q9XG54) 12-oxophytodienoate reductase 1 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 1) (OPDA-reductase 1) (LeOPR1) Length = 376 Score = 91.7 bits (226), Expect = 4e-19 Identities = 46/72 (63%), Positives = 57/72 (79%), Gaps = 3/72 (4%) Frame = +3 Query: 69 NKMVAK---EAIPLLTPHKMGQFELSHRVVLAPLTRCRSYANVPQPHAAVYYSQRATKGG 239 NK+V + + IPL++P KMG+FEL HRVVLAPLTR RSY +PQPHA ++YSQR+T GG Sbjct: 3 NKVVEEKQVDKIPLMSPCKMGKFELCHRVVLAPLTRQRSYGYIPQPHAILHYSQRSTNGG 62 Query: 240 LLISEATGVSPT 275 LLI EAT +S T Sbjct: 63 LLIGEATVISET 74
>OPR3_LYCES (Q9FEW9) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (LeOPR3) Length = 396 Score = 84.3 bits (207), Expect = 7e-17 Identities = 38/61 (62%), Positives = 47/61 (77%) Frame = +3 Query: 96 PLLTPHKMGQFELSHRVVLAPLTRCRSYANVPQPHAAVYYSQRATKGGLLISEATGVSPT 275 PL +P+KMG+F LSHRVVLAP+TRCR+ N+PQ YY QRAT GG LI+E T +SPT Sbjct: 11 PLFSPYKMGKFNLSHRVVLAPMTRCRALNNIPQAALGEYYEQRATAGGFLITEGTMISPT 70 Query: 276 A 278 + Sbjct: 71 S 71
>OPRL1_ARATH (Q8GYA3) Putative 12-oxophytodienoate reductase-like protein 1 (EC| 1.3.1.-) Length = 324 Score = 82.0 bits (201), Expect = 4e-16 Identities = 37/54 (68%), Positives = 43/54 (79%) Frame = +3 Query: 117 MGQFELSHRVVLAPLTRCRSYANVPQPHAAVYYSQRATKGGLLISEATGVSPTA 278 M F L+HR+V+AP+ R RSY N+PQPH A+YY QR T GGLLISEATGVS TA Sbjct: 1 MKNFNLTHRIVMAPMARMRSYGNIPQPHVALYYCQRTTPGGLLISEATGVSETA 54
>OPRL_LYCES (Q9FEX0) 12-oxophytodienoate reductase-like protein (EC 1.3.1.-)| (LeOPR2) Length = 355 Score = 78.2 bits (191), Expect = 5e-15 Identities = 36/63 (57%), Positives = 45/63 (71%) Frame = +3 Query: 81 AKEAIPLLTPHKMGQFELSHRVVLAPLTRCRSYANVPQPHAAVYYSQRATKGGLLISEAT 260 + A+PL TP+K+G+F+L+HR+V LTR RS N PQ H YYSQRAT GGL+ISEA Sbjct: 5 SNSAVPLCTPYKLGRFKLTHRIVFPALTRNRSQNNTPQSHLTEYYSQRATNGGLIISEAA 64 Query: 261 GVS 269 S Sbjct: 65 AAS 67
>OPR3_ARATH (Q9FUP0) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (Delayed dehiscence 1) (AtOPR3) Length = 391 Score = 75.1 bits (183), Expect = 4e-14 Identities = 36/58 (62%), Positives = 43/58 (74%) Frame = +3 Query: 99 LLTPHKMGQFELSHRVVLAPLTRCRSYANVPQPHAAVYYSQRATKGGLLISEATGVSP 272 L + +KMG+F+LSHRVVLAP+TRCR+ VP A YY+QR T GG LISE T VSP Sbjct: 12 LFSSYKMGRFDLSHRVVLAPMTRCRALNGVPNAALAEYYAQRTTPGGFLISEGTMVSP 69
>OYE3_YEAST (P41816) NADPH dehydrogenase 3 (EC 1.6.99.1) (Old yellow enzyme 3)| Length = 399 Score = 51.6 bits (122), Expect = 5e-07 Identities = 30/64 (46%), Positives = 41/64 (64%), Gaps = 4/64 (6%) Frame = +3 Query: 99 LLTPHKMGQFELSHRVVLAPLTRCRSY--ANVPQPH-AAVYYSQRATK-GGLLISEATGV 266 L P K+G +L+HR V+ PLTR R+ N+P AAVYY QRA + G ++I+E T + Sbjct: 16 LFEPIKIGNTQLAHRAVMPPLTRMRATHPGNIPNKEWAAVYYGQRAQRPGTMIITEGTFI 75 Query: 267 SPTA 278 SP A Sbjct: 76 SPQA 79
>NEMA_ECOLI (P77258) N-ethylmaleimide reductase (EC 1.-.-.-) (N-ethylmaleimide| reducing enzyme) Length = 365 Score = 50.4 bits (119), Expect = 1e-06 Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 2/62 (3%) Frame = +3 Query: 99 LLTPHKMGQFELSHRVVLAPLTRCRSY--ANVPQPHAAVYYSQRATKGGLLISEATGVSP 272 L +P K+G ++R+ +APLTR RS ++P P A YY QRA+ GL+ISEAT +S Sbjct: 6 LYSPLKVGAITAANRIFMAPLTRLRSIEPGDIPTPLMAEYYRQRAS-AGLIISEATQISA 64 Query: 273 TA 278 A Sbjct: 65 QA 66
>OYE1_SACPS (Q02899) NADPH dehydrogenase 1 (EC 1.6.99.1) (Old yellow enzyme 1)| Length = 399 Score = 46.6 bits (109), Expect = 2e-05 Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%) Frame = +3 Query: 99 LLTPHKMGQFELSHRVVLAPLTRCRSY--ANVPQPHAAV-YYSQRATK-GGLLISEATGV 266 L P K+G EL HR V+ PLTR R+ N+P AV YY+QRA + G ++I+E + Sbjct: 16 LFKPIKIGNNELLHRAVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFI 75 Query: 267 SPTA 278 SP A Sbjct: 76 SPQA 79
>OYE2_YEAST (Q03558) NADPH dehydrogenase 2 (EC 1.6.99.1) (Old yellow enzyme 2)| Length = 399 Score = 46.2 bits (108), Expect = 2e-05 Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 4/62 (6%) Frame = +3 Query: 99 LLTPHKMGQFELSHRVVLAPLTRCRSY--ANVPQPHAAV-YYSQRATK-GGLLISEATGV 266 L P K+G EL HR V+ PLTR R+ N+P AV YY+QRA + G L+I+E T Sbjct: 16 LFKPIKIGNNELLHRAVIPPLTRMRAQHPGNIPNRDWAVEYYAQRAQRPGTLIITEGTFP 75 Query: 267 SP 272 SP Sbjct: 76 SP 77
>KYE1_KLULA (P40952) NADPH dehydrogenase 1 (EC 1.6.99.1) (Old yellow enzyme 1)| Length = 398 Score = 42.0 bits (97), Expect = 4e-04 Identities = 28/63 (44%), Positives = 35/63 (55%), Gaps = 3/63 (4%) Frame = +3 Query: 99 LLTPHKMGQFELSHRVVLAPLTRCRSY--ANVPQPHAAV-YYSQRATKGGLLISEATGVS 269 + P K+G EL HRVV+ LTR R+ NVP P AV YY QR+ G +I G Sbjct: 16 IFKPIKIGNTELKHRVVMPALTRMRALHPGNVPNPDWAVEYYRQRSQYPGTMII-TEGAF 74 Query: 270 PTA 278 P+A Sbjct: 75 PSA 77
>OYEA_SCHPO (Q09670) Putative NADPH dehydrogenase C5H10.04 (EC 1.6.99.1) (Old| yellow enzyme homolog) Length = 382 Score = 37.4 bits (85), Expect = 0.010 Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 3/59 (5%) Frame = +3 Query: 99 LLTPHKMGQFELSHRVVLAPLTRCRS--YANVPQPHAAVYYSQRA-TKGGLLISEATGV 266 L P K+G L HR+V AP+TR R+ Y + YYSQR+ G LLI++AT V Sbjct: 7 LFKPIKVGNMLLQHRIVHAPMTRLRATDYGKI-TGLMVEYYSQRSMIPGTLLIADATFV 64
>OYEB_SCHPO (Q09671) Putative NADPH dehydrogenase C5H10.10 (EC 1.6.99.1) (Old| yellow enzyme homolog) Length = 392 Score = 36.6 bits (83), Expect = 0.017 Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 3/56 (5%) Frame = +3 Query: 99 LLTPHKMGQFELSHRVVLAPLTRCRSYAN--VPQPHAAVYYSQRAT-KGGLLISEA 257 L P K+G +L HR+V AP TR R N V YY QR++ G LLI+E+ Sbjct: 13 LFQPIKVGNMQLQHRMVHAPATRLRCLDNGLVMTDLVKEYYKQRSSIPGTLLITES 68
>NAMA_GEOKA (Q5KXG9) NADPH dehydrogenase (EC 1.6.99.1) (Xenobiotic reductase)| Length = 340 Score = 32.0 bits (71), Expect = 0.42 Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%) Frame = +3 Query: 99 LLTPHKMGQFELSHRVVLAPLTR--CRSYANVPQPHAAVYYSQRAT-KGGLLISEATGVS 269 L +P+ + L +R+V++P+ C + + ++Y RA + GL+I EATGV+ Sbjct: 5 LFSPYTIRGLTLKNRIVMSPMCMYSCDTKDGAVRTWHKIHYPARAVGQVGLIIVEATGVT 64 Query: 270 P 272 P Sbjct: 65 P 65
>NAMA_BACLD (Q65HN9) NADPH dehydrogenase (EC 1.6.99.1) (Xenobiotic reductase)| Length = 339 Score = 32.0 bits (71), Expect = 0.42 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = +3 Query: 99 LLTPHKMGQFELSHRVVLAPLTRCRSY---ANVPQPHAAVYYSQRATKGGLLISEATGVS 269 L TP + L +R+V++P+ S+ V H Y S+ + GL++ EAT V+ Sbjct: 6 LFTPWSLKGVTLKNRIVMSPMCMYSSHEKDGKVQPFHMTHYISRAVGQVGLIMVEATAVT 65 Query: 270 P 272 P Sbjct: 66 P 66
>NAMA_BACSU (P54550) NADPH dehydrogenase (EC 1.6.99.1) (Xenobiotic reductase)| Length = 337 Score = 31.6 bits (70), Expect = 0.55 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 3/61 (4%) Frame = +3 Query: 99 LLTPHKMGQFELSHRVVLAPLTRCRSY---ANVPQPHAAVYYSQRATKGGLLISEATGVS 269 L TP + L +R+V++P+ S+ + H A Y S+ + GL+I EA+ V+ Sbjct: 4 LFTPITIKDMTLKNRIVMSPMCMYSSHEKDGKLTPFHMAHYISRAIGQVGLIIVEASAVN 63 Query: 270 P 272 P Sbjct: 64 P 64
>TRMU_XANCP (Q8P9A1) Probable tRNA| (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) Length = 378 Score = 30.0 bits (66), Expect = 1.6 Identities = 14/31 (45%), Positives = 16/31 (51%) Frame = +2 Query: 188 APAARGGVLLAAGHQGRLAHQRGHWRLAHRA 280 A A G +A GH R+AH G WRL A Sbjct: 111 AAQALGAERIATGHYARVAHLGGRWRLLRGA 141
>GERPE_BACSU (O06717) Probable spore germination protein gerPE| Length = 133 Score = 30.0 bits (66), Expect = 1.6 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%) Frame = +2 Query: 113 QDGAVRALPPGGARAA--HEVPLLCQRAPAARGGVLLAAGHQGRLAHQRGHWRLAH 274 Q AV+ LP G ++A HEVP + R+ +G + H G + RG RL H Sbjct: 62 QQQAVKPLPETGVQSAFCHEVPAIYVRSIKIQGVSASSVLHAGSASLIRGDARLKH 117
>TRMU_XANAC (Q8PL08) Probable tRNA| (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) Length = 378 Score = 29.6 bits (65), Expect = 2.1 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +2 Query: 188 APAARGGVLLAAGHQGRLAHQRGHWRLAHRA 280 A A G +A GH ++AH+ G WRL A Sbjct: 111 AAQALGAERIATGHYAQVAHRGGRWRLLRGA 141
>ARNA_SALTI (Q8Z540) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 29.3 bits (64), Expect = 2.7 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Frame = +3 Query: 78 VAKEAIPLLTPHKMGQFELSHRVVLAPLTRCRSYANVPQPHA-AVYYSQRATKGGLL 245 +A++ + L HK+ Q + P +C + +VPQ + A YY +R + GL+ Sbjct: 152 IAQDDVALTLHHKLCQAARQLLNSILPTMKCGNIPSVPQRESDATYYGRRRPEDGLI 208
>ARNA_SALPA (Q5PNA6) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 29.3 bits (64), Expect = 2.7 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Frame = +3 Query: 78 VAKEAIPLLTPHKMGQFELSHRVVLAPLTRCRSYANVPQPHA-AVYYSQRATKGGLL 245 +A++ + L HK+ Q + P +C + +VPQ + A YY +R + GL+ Sbjct: 152 IAQDDVALTLHHKLCQAARQLLNSILPTMKCGNIPSVPQRESDATYYGRRRPEDGLI 208
>ARNA_SALCH (P0C0R6) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 28.9 bits (63), Expect = 3.6 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Frame = +3 Query: 78 VAKEAIPLLTPHKMGQFELSHRVVLAPLTRCRSYANVPQPHA-AVYYSQRATKGGLL 245 +A++ + L HK+ Q + P +C +VPQ + A YY +R + GL+ Sbjct: 152 IAQDDVALTLHHKLCQAARQLLNSILPTMKCGDIPSVPQRESDATYYGRRRPEDGLI 208
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 28.9 bits (63), Expect = 3.6 Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 5/52 (9%) Frame = +2 Query: 104 DAPQDGAV-----RALPPGGARAAHEVPLLCQRAPAARGGVLLAAGHQGRLA 244 D PQ GA RA+P GGAR VP + A G +LAA H G A Sbjct: 528 DGPQRGAEPPAVGRAVPEGGARVKVRVP---EPERGALAGHVLAAVHGGEHA 576
>HCN1_MOUSE (O88704) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 1 (Brain cyclic nucleotide gated channel 1) (BCNG-1) (Hyperpolarization-activated cation channel 2) (HAC-2) Length = 910 Score = 28.5 bits (62), Expect = 4.6 Identities = 19/57 (33%), Positives = 26/57 (45%) Frame = +3 Query: 42 VHSSHMMVANKMVAKEAIPLLTPHKMGQFELSHRVVLAPLTRCRSYANVPQPHAAVY 212 VH S + N + KE PL E+S + T S A++PQP AAV+ Sbjct: 788 VHKSTQALHNTNLTKEVRPLSASQPSLPHEVSTLISRPHPTVGESLASIPQPVAAVH 844
>GALC_MOUSE (P54818) Galactocerebrosidase precursor (EC 3.2.1.46) (GALCERase)| (Galactosylceramidase) (Galactosylceramide beta-galactosidase) (Galactocerebroside beta-galactosidase) Length = 668 Score = 28.5 bits (62), Expect = 4.6 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = +3 Query: 165 RCRSYANVPQPHAAVYYSQRATKGGLLISEATGV 266 +C Y P+ V+ + R KGG+LI ATGV Sbjct: 546 QCDVYIETPRS-GGVFIAGRVNKGGILIRSATGV 578
>Y703_ENCCU (Q8ST93) Hypothetical protein ECU07_0030/ECU09_2040| Length = 236 Score = 28.1 bits (61), Expect = 6.1 Identities = 15/55 (27%), Positives = 21/55 (38%) Frame = +3 Query: 33 LHIVHSSHMMVANKMVAKEAIPLLTPHKMGQFELSHRVVLAPLTRCRSYANVPQP 197 LHI+ + + +K+V IP TP +HR P R P P Sbjct: 52 LHILRENRCLAVSKVVHTPDIPPKTPASQAASNRAHRTAKHPARRQSCKLKAPNP 106
>PCNT_MOUSE (P48725) Pericentrin| Length = 1920 Score = 28.1 bits (61), Expect = 6.1 Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 2/65 (3%) Frame = +3 Query: 18 IASYLLHIVHSSHMMVANKMVAKEAIPLLTPHKMGQFELSHR--VVLAPLTRCRSYANVP 191 + + LL + H H + + P L ++ LSH+ V+ P +CR + Sbjct: 1614 LEAILLALAHFRHALEQQTCATPDEPPELRQLRVQCARLSHQLQVLYRPFLKCRMQLDQH 1673 Query: 192 QPHAA 206 QPH A Sbjct: 1674 QPHVA 1678
>S6A11_RAT (P31647) Sodium- and chloride-dependent GABA transporter 3| Length = 627 Score = 28.1 bits (61), Expect = 6.1 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Frame = +2 Query: 122 AVRALPPGGARAAHEVPLLCQRAPAARGGVLLAAGHQ---GRLAHQRGHW 262 A +ALP G +AA E + + A GG AAG + + H+RGHW Sbjct: 3 AEQALPLGNGKAAEEA----RGSEALGGGGGGAAGTREARDKAVHERGHW 48
>NAMA_BACHD (Q9KCT8) NADPH dehydrogenase (EC 1.6.99.1) (Xenobiotic reductase)| Length = 338 Score = 28.1 bits (61), Expect = 6.1 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%) Frame = +3 Query: 132 LSHRVVLAPLTRCRSY---ANVPQPHAAVYYSQRATKGGLLISEATGVSP 272 L +R+V++P+ S + H + Y S+ A + GL+I EAT V+P Sbjct: 16 LKNRIVMSPMCMYSSDQKDGKIRPFHISHYESRAAGQVGLIIVEATAVTP 65
>ARNA_SALTY (O52325) Bifunctional polymyxin resistance arnA protein (Polymyxin| resistance protein pmrI) [Includes: UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1 Length = 660 Score = 27.7 bits (60), Expect = 7.9 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Frame = +3 Query: 78 VAKEAIPLLTPHKMGQFELSHRVVLAPLTRCRSYANVPQPHA-AVYYSQRATKGGLL 245 +A++ + L HK+ Q + P +C +VPQ + + YY +R + GL+ Sbjct: 152 IAQDDVALTLHHKLCQAARQLLNSILPTMKCGDIPSVPQRESDSTYYGRRRPEDGLI 208
>HCN1_RABIT (Q9MZS1) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 1 (rbHCN1) Length = 822 Score = 27.7 bits (60), Expect = 7.9 Identities = 18/57 (31%), Positives = 26/57 (45%) Frame = +3 Query: 42 VHSSHMMVANKMVAKEAIPLLTPHKMGQFELSHRVVLAPLTRCRSYANVPQPHAAVY 212 VH S + N + +E PL E+S + T S A++PQP AAV+ Sbjct: 699 VHRSTQALPNTSLTREVRPLSASQPSLPHEVSTLISRPHPTVGESLASIPQPVAAVH 755
>S6A11_MOUSE (P31650) Sodium- and chloride-dependent GABA transporter 4 (GAT4)| Length = 627 Score = 27.7 bits (60), Expect = 7.9 Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 9/56 (16%) Frame = +2 Query: 122 AVRALPPGGARAAHEVPLLCQRAPAARGGVLLAAGHQG---------RLAHQRGHW 262 A +ALP G +AA E ARG L G G + H+RGHW Sbjct: 3 AEQALPLGNGKAAEE----------ARGSETLGGGGGGAAGTREARDKAVHERGHW 48
>MYF5_CHICK (Q08856) Myogenic factor 5 (Myf-5)| Length = 258 Score = 27.7 bits (60), Expect = 7.9 Identities = 22/73 (30%), Positives = 26/73 (35%) Frame = +2 Query: 41 SSQFTHXXXXXXXXXXXXPVADAPQDGAVRALPPGGARAAHEVPLLCQRAPAARGGVLLA 220 S QF+ P + P+D R LPP GA A E P V Sbjct: 6 SCQFSPSELFYDSSCLSSPEGEFPEDFEPRELPPFGAPAPTE-----PACPEEEEHVRAP 60 Query: 221 AGHQGRLAHQRGH 259 +GH HQ GH Sbjct: 61 SGH-----HQAGH 68 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,784,325 Number of Sequences: 219361 Number of extensions: 519148 Number of successful extensions: 1555 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 1532 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1550 length of database: 80,573,946 effective HSP length: 68 effective length of database: 65,657,398 effective search space used: 1575777552 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
