ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast48e04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|AJ557138.1|OSA557138 Oryza sativa (japonica cultivar-group) ... 214 1e-52
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 214 1e-52
3dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic D... 214 1e-52
4dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic D... 214 1e-52
5dbj|AB122088.1| Oryza sativa (japonica cultivar-group) OPDAR1 g... 214 1e-52
6dbj|AK103067.1| Oryza sativa (japonica cultivar-group) cDNA clon... 214 1e-52
7dbj|AB040743.1| Oryza sativa RRJ4 mRNA for 12-oxophytodienoic ac... 214 1e-52
8gb|AY921639.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR2... 200 2e-48
9gb|AY921638.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR1... 192 4e-46
10gb|AY108052.1| Zea mays PCO079165 mRNA sequence 192 4e-46
11dbj|AK105590.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 1e-36
12dbj|AK104256.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 1e-27
13dbj|AK104193.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 1e-27
14dbj|AK104039.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 1e-27
15dbj|AK108079.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 1e-24
16dbj|AK072596.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 8e-23
17dbj|AK061212.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 8e-23
18gb|AY921640.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR3... 113 3e-22
19emb|AJ557139.1|OSA557139 Oryza sativa (japonica cultivar-group) ... 107 2e-20
20gb|AY921645.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR8... 42 0.92
21gb|AY921644.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR7... 42 0.92
22dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 42 0.92
23ref|XM_506828.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 3.7
24ref|XM_466236.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.7
25gb|AC012647.18| Trypanosoma brucei chromosome 2 clone RPCI93-27H... 40 3.7
26gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence 40 3.7
27dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.7
28ref|XM_231528.3| PREDICTED: Rattus norvegicus similar to Ca2+-de... 40 3.7
29dbj|AP005883.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.7
30dbj|AK069898.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.7
31dbj|AK059887.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.7
32gb|U45966.1|HGU45966 Hepatitis G virus isolate R10291, complete ... 40 3.7

>emb|AJ557138.1|OSA557138 Oryza sativa (japonica cultivar-group) mRNA for oxo-phytodienoic
           acid reductase (opda gene)
          Length = 1343

 Score =  214 bits (108), Expect = 1e-52
 Identities = 171/192 (89%)
 Strand = Plus / Plus

                                                                       
Query: 89  ggcgatcccgttgctgacgccccacaagatggggcagttcgagctctcccaccgggtggt 148
           |||||||||| ||||||||||  |||||||||||||| | |||||||||||||| |||||
Sbjct: 75  ggcgatcccgctgctgacgccgtacaagatggggcagctggagctctcccaccgtgtggt 134

                                                                       
Query: 149 gctcgcgccgctcacgaggtgccgctcctatgccaacgtgccccagccgcacgcggcggt 208
           |||||||||||||||| ||||||||||||| | ||||||||| |||||||||||||||||
Sbjct: 135 gctcgcgccgctcacgcggtgccgctcctacggcaacgtgccgcagccgcacgcggcggt 194

                                                                       
Query: 209 gtactactcgcagcgggccaccaagggcggcttgctcatcagcgaggccactggcgtctc 268
           |||||||||||||||||| |||| ||||||| | ||||||   |||||||| | | ||||
Sbjct: 195 gtactactcgcagcgggcgaccaggggcggcctcctcatcgcggaggccaccgacatctc 254

                       
Query: 269 gcccaccgcgca 280
            |||||||||||
Sbjct: 255 ccccaccgcgca 266



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  214 bits (108), Expect = 1e-52
 Identities = 171/192 (89%)
 Strand = Plus / Minus

                                                                           
Query: 89      ggcgatcccgttgctgacgccccacaagatggggcagttcgagctctcccaccgggtggt 148
               |||||||||| ||||||||||  |||||||||||||| | |||||||||||||| |||||
Sbjct: 5930363 ggcgatcccgctgctgacgccgtacaagatggggcagctggagctctcccaccgtgtggt 5930304

                                                                           
Query: 149     gctcgcgccgctcacgaggtgccgctcctatgccaacgtgccccagccgcacgcggcggt 208
               |||||||||||||||| ||||||||||||| | ||||||||| |||||||||||||||||
Sbjct: 5930303 gctcgcgccgctcacgcggtgccgctcctacggcaacgtgccgcagccgcacgcggcggt 5930244

                                                                           
Query: 209     gtactactcgcagcgggccaccaagggcggcttgctcatcagcgaggccactggcgtctc 268
               |||||||||||||||||| |||| ||||||| | ||||||   |||||||| | | ||||
Sbjct: 5930243 gtactactcgcagcgggcgaccaggggcggcctcctcatcgcggaggccaccgacatctc 5930184

                           
Query: 269     gcccaccgcgca 280
                |||||||||||
Sbjct: 5930183 ccccaccgcgca 5930172



 Score =  194 bits (98), Expect = 1e-46
 Identities = 170/194 (87%)
 Strand = Plus / Minus

                                                                           
Query: 87      gaggcgatcccgttgctgacgccccacaagatggggcagttcgagctctcccaccgggtg 146
               |||||||||||| ||||||||||  |||||||||||||| | ||||| ||||||||||||
Sbjct: 5925081 gaggcgatcccgctgctgacgccgtacaagatggggcagctggagctgtcccaccgggtg 5925022

                                                                           
Query: 147     gtgctcgcgccgctcacgaggtgccgctcctatgccaacgtgccccagccgcacgcggcg 206
               |||||||||||||| ||| ||||||||||||| | | ||||||| ||||||||||| |||
Sbjct: 5925021 gtgctcgcgccgctgacgcggtgccgctcctacggccacgtgccgcagccgcacgccgcg 5924962

                                                                           
Query: 207     gtgtactactcgcagcgggccaccaagggcggcttgctcatcagcgaggccactggcgtc 266
               ||||||||||||||||| |||||||| |||||  | ||||||   |||||||||| | ||
Sbjct: 5924961 gtgtactactcgcagcgcgccaccaacggcggactcctcatcgcggaggccactgtcatc 5924902

                             
Query: 267     tcgcccaccgcgca 280
               || |||||||||||
Sbjct: 5924901 tcccccaccgcgca 5924888



 Score =  161 bits (81), Expect = 1e-36
 Identities = 123/137 (89%)
 Strand = Plus / Minus

                                                                           
Query: 112     acaagatggggcagttcgagctctcccaccgggtggtgctcgcgccgctcacgaggtgcc 171
               |||||||||||| |||||||||||||||||| ||||||||||||||||| ||  ||||||
Sbjct: 5916637 acaagatggggcggttcgagctctcccaccgcgtggtgctcgcgccgctgactcggtgcc 5916578

                                                                           
Query: 172     gctcctatgccaacgtgccccagccgcacgcggcggtgtactactcgcagcgggccacca 231
               ||||||| | | ||||||| ||||||||||||||| |||||||||||||||| |||||||
Sbjct: 5916577 gctcctacgaccacgtgccacagccgcacgcggcgctgtactactcgcagcgcgccacca 5916518

                                
Query: 232     agggcggcttgctcatc 248
               | |||||| | ||||||
Sbjct: 5916517 atggcggcctcctcatc 5916501



 Score =  161 bits (81), Expect = 1e-36
 Identities = 153/177 (86%)
 Strand = Plus / Minus

                                                                           
Query: 92      gatcccgttgctgacgccccacaagatggggcagttcgagctctcccaccgggtggtgct 151
               ||||||| ||||||||||  |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 5907044 gatcccgctgctgacgccgtacaagatggggcggttcgagctctcccaccgtgtggtgct 5906985

                                                                           
Query: 152     cgcgccgctcacgaggtgccgctcctatgccaacgtgccccagccgcacgcggcggtgta 211
               ||||||||||||| ||  ||||||||| | ||||||||| | ||||||||||| | ||||
Sbjct: 5906984 cgcgccgctcacgcggaaccgctcctacggcaacgtgccgcggccgcacgcggtgctgta 5906925

                                                                        
Query: 212     ctactcgcagcgggccaccaagggcggcttgctcatcagcgaggccactggcgtctc 268
               |||| ||||||| |||||||  |||||| | ||| |||  |||||||| ||||||||
Sbjct: 5906924 ctacacgcagcgcgccaccagcggcggcctcctcgtcacggaggccaccggcgtctc 5906868



 Score =  121 bits (61), Expect = 1e-24
 Identities = 127/149 (85%)
 Strand = Plus / Minus

                                                                           
Query: 132     ctctcccaccgggtggtgctcgcgccgctcacgaggtgccgctcctatgccaacgtgccc 191
               ||||||||||| ||| ||||||||||| | ||| ||||||| ||||| | ||||||||| 
Sbjct: 5891131 ctctcccaccgtgtgctgctcgcgccgatgacgcggtgccgatcctacggcaacgtgccg 5891072

                                                                           
Query: 192     cagccgcacgcggcggtgtactactcgcagcgggccaccaagggcggcttgctcatcagc 251
               ||||||||||||||| |||||||| ||||||| ||||||   |||||| | |||||||  
Sbjct: 5891071 cagccgcacgcggcgctgtactacacgcagcgcgccacccgcggcggcctcctcatcacg 5891012

                                            
Query: 252     gaggccactggcgtctcgcccaccgcgca 280
               |||||||| ||||||||  ||||||||||
Sbjct: 5891011 gaggccaccggcgtctccgccaccgcgca 5890983



 Score =  115 bits (58), Expect = 8e-23
 Identities = 121/142 (85%)
 Strand = Plus / Minus

                                                                           
Query: 127     tcgagctctcccaccgggtggtgctcgcgccgctcacgaggtgccgctcctatgccaacg 186
               |||| ||||||||||| ||| ||||| ||||| | ||| ||||||| ||||| | |||||
Sbjct: 5896806 tcgatctctcccaccgtgtgctgctctcgccgatgacgcggtgccgatcctacggcaacg 5896747

                                                                           
Query: 187     tgccccagccgcacgcggcggtgtactactcgcagcgggccaccaagggcggcttgctca 246
               |||| ||||||||||||||| |||||||| ||||||| |||||||  |||||| | ||||
Sbjct: 5896746 tgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagcggcggcctcctca 5896687

                                     
Query: 247     tcagcgaggccactggcgtctc 268
               |||  |||||||| ||||||||
Sbjct: 5896686 tcacggaggccaccggcgtctc 5896665



to top

>dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0024N18
          Length = 128739

 Score =  214 bits (108), Expect = 1e-52
 Identities = 171/192 (89%)
 Strand = Plus / Minus

                                                                         
Query: 89    ggcgatcccgttgctgacgccccacaagatggggcagttcgagctctcccaccgggtggt 148
             |||||||||| ||||||||||  |||||||||||||| | |||||||||||||| |||||
Sbjct: 52015 ggcgatcccgctgctgacgccgtacaagatggggcagctggagctctcccaccgtgtggt 51956

                                                                         
Query: 149   gctcgcgccgctcacgaggtgccgctcctatgccaacgtgccccagccgcacgcggcggt 208
             |||||||||||||||| ||||||||||||| | ||||||||| |||||||||||||||||
Sbjct: 51955 gctcgcgccgctcacgcggtgccgctcctacggcaacgtgccgcagccgcacgcggcggt 51896

                                                                         
Query: 209   gtactactcgcagcgggccaccaagggcggcttgctcatcagcgaggccactggcgtctc 268
             |||||||||||||||||| |||| ||||||| | ||||||   |||||||| | | ||||
Sbjct: 51895 gtactactcgcagcgggcgaccaggggcggcctcctcatcgcggaggccaccgacatctc 51836

                         
Query: 269   gcccaccgcgca 280
              |||||||||||
Sbjct: 51835 ccccaccgcgca 51824



 Score =  194 bits (98), Expect = 1e-46
 Identities = 170/194 (87%)
 Strand = Plus / Minus

                                                                         
Query: 87    gaggcgatcccgttgctgacgccccacaagatggggcagttcgagctctcccaccgggtg 146
             |||||||||||| ||||||||||  |||||||||||||| | ||||| ||||||||||||
Sbjct: 46733 gaggcgatcccgctgctgacgccgtacaagatggggcagctggagctgtcccaccgggtg 46674

                                                                         
Query: 147   gtgctcgcgccgctcacgaggtgccgctcctatgccaacgtgccccagccgcacgcggcg 206
             |||||||||||||| ||| ||||||||||||| | | ||||||| ||||||||||| |||
Sbjct: 46673 gtgctcgcgccgctgacgcggtgccgctcctacggccacgtgccgcagccgcacgccgcg 46614

                                                                         
Query: 207   gtgtactactcgcagcgggccaccaagggcggcttgctcatcagcgaggccactggcgtc 266
             ||||||||||||||||| |||||||| |||||  | ||||||   |||||||||| | ||
Sbjct: 46613 gtgtactactcgcagcgcgccaccaacggcggactcctcatcgcggaggccactgtcatc 46554

                           
Query: 267   tcgcccaccgcgca 280
             || |||||||||||
Sbjct: 46553 tcccccaccgcgca 46540



 Score =  161 bits (81), Expect = 1e-36
 Identities = 123/137 (89%)
 Strand = Plus / Minus

                                                                         
Query: 112   acaagatggggcagttcgagctctcccaccgggtggtgctcgcgccgctcacgaggtgcc 171
             |||||||||||| |||||||||||||||||| ||||||||||||||||| ||  ||||||
Sbjct: 38289 acaagatggggcggttcgagctctcccaccgcgtggtgctcgcgccgctgactcggtgcc 38230

                                                                         
Query: 172   gctcctatgccaacgtgccccagccgcacgcggcggtgtactactcgcagcgggccacca 231
             ||||||| | | ||||||| ||||||||||||||| |||||||||||||||| |||||||
Sbjct: 38229 gctcctacgaccacgtgccacagccgcacgcggcgctgtactactcgcagcgcgccacca 38170

                              
Query: 232   agggcggcttgctcatc 248
             | |||||| | ||||||
Sbjct: 38169 atggcggcctcctcatc 38153



 Score =  161 bits (81), Expect = 1e-36
 Identities = 153/177 (86%)
 Strand = Plus / Minus

                                                                         
Query: 92    gatcccgttgctgacgccccacaagatggggcagttcgagctctcccaccgggtggtgct 151
             ||||||| ||||||||||  |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 28696 gatcccgctgctgacgccgtacaagatggggcggttcgagctctcccaccgtgtggtgct 28637

                                                                         
Query: 152   cgcgccgctcacgaggtgccgctcctatgccaacgtgccccagccgcacgcggcggtgta 211
             ||||||||||||| ||  ||||||||| | ||||||||| | ||||||||||| | ||||
Sbjct: 28636 cgcgccgctcacgcggaaccgctcctacggcaacgtgccgcggccgcacgcggtgctgta 28577

                                                                      
Query: 212   ctactcgcagcgggccaccaagggcggcttgctcatcagcgaggccactggcgtctc 268
             |||| ||||||| |||||||  |||||| | ||| |||  |||||||| ||||||||
Sbjct: 28576 ctacacgcagcgcgccaccagcggcggcctcctcgtcacggaggccaccggcgtctc 28520



 Score =  121 bits (61), Expect = 1e-24
 Identities = 127/149 (85%)
 Strand = Plus / Minus

                                                                         
Query: 132   ctctcccaccgggtggtgctcgcgccgctcacgaggtgccgctcctatgccaacgtgccc 191
             ||||||||||| ||| ||||||||||| | ||| ||||||| ||||| | ||||||||| 
Sbjct: 12783 ctctcccaccgtgtgctgctcgcgccgatgacgcggtgccgatcctacggcaacgtgccg 12724

                                                                         
Query: 192   cagccgcacgcggcggtgtactactcgcagcgggccaccaagggcggcttgctcatcagc 251
             ||||||||||||||| |||||||| ||||||| ||||||   |||||| | |||||||  
Sbjct: 12723 cagccgcacgcggcgctgtactacacgcagcgcgccacccgcggcggcctcctcatcacg 12664

                                          
Query: 252   gaggccactggcgtctcgcccaccgcgca 280
             |||||||| ||||||||  ||||||||||
Sbjct: 12663 gaggccaccggcgtctccgccaccgcgca 12635



 Score =  115 bits (58), Expect = 8e-23
 Identities = 121/142 (85%)
 Strand = Plus / Minus

                                                                         
Query: 127   tcgagctctcccaccgggtggtgctcgcgccgctcacgaggtgccgctcctatgccaacg 186
             |||| ||||||||||| ||| ||||| ||||| | ||| ||||||| ||||| | |||||
Sbjct: 18458 tcgatctctcccaccgtgtgctgctctcgccgatgacgcggtgccgatcctacggcaacg 18399

                                                                         
Query: 187   tgccccagccgcacgcggcggtgtactactcgcagcgggccaccaagggcggcttgctca 246
             |||| ||||||||||||||| |||||||| ||||||| |||||||  |||||| | ||||
Sbjct: 18398 tgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagcggcggcctcctca 18339

                                   
Query: 247   tcagcgaggccactggcgtctc 268
             |||  |||||||| ||||||||
Sbjct: 18338 tcacggaggccaccggcgtctc 18317



to top

>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0537F07
          Length = 147724

 Score =  214 bits (108), Expect = 1e-52
 Identities = 171/192 (89%)
 Strand = Plus / Minus

                                                                          
Query: 89     ggcgatcccgttgctgacgccccacaagatggggcagttcgagctctcccaccgggtggt 148
              |||||||||| ||||||||||  |||||||||||||| | |||||||||||||| |||||
Sbjct: 131138 ggcgatcccgctgctgacgccgtacaagatggggcagctggagctctcccaccgtgtggt 131079

                                                                          
Query: 149    gctcgcgccgctcacgaggtgccgctcctatgccaacgtgccccagccgcacgcggcggt 208
              |||||||||||||||| ||||||||||||| | ||||||||| |||||||||||||||||
Sbjct: 131078 gctcgcgccgctcacgcggtgccgctcctacggcaacgtgccgcagccgcacgcggcggt 131019

                                                                          
Query: 209    gtactactcgcagcgggccaccaagggcggcttgctcatcagcgaggccactggcgtctc 268
              |||||||||||||||||| |||| ||||||| | ||||||   |||||||| | | ||||
Sbjct: 131018 gtactactcgcagcgggcgaccaggggcggcctcctcatcgcggaggccaccgacatctc 130959

                          
Query: 269    gcccaccgcgca 280
               |||||||||||
Sbjct: 130958 ccccaccgcgca 130947



 Score =  194 bits (98), Expect = 1e-46
 Identities = 170/194 (87%)
 Strand = Plus / Minus

                                                                          
Query: 87     gaggcgatcccgttgctgacgccccacaagatggggcagttcgagctctcccaccgggtg 146
              |||||||||||| ||||||||||  |||||||||||||| | ||||| ||||||||||||
Sbjct: 125856 gaggcgatcccgctgctgacgccgtacaagatggggcagctggagctgtcccaccgggtg 125797

                                                                          
Query: 147    gtgctcgcgccgctcacgaggtgccgctcctatgccaacgtgccccagccgcacgcggcg 206
              |||||||||||||| ||| ||||||||||||| | | ||||||| ||||||||||| |||
Sbjct: 125796 gtgctcgcgccgctgacgcggtgccgctcctacggccacgtgccgcagccgcacgccgcg 125737

                                                                          
Query: 207    gtgtactactcgcagcgggccaccaagggcggcttgctcatcagcgaggccactggcgtc 266
              ||||||||||||||||| |||||||| |||||  | ||||||   |||||||||| | ||
Sbjct: 125736 gtgtactactcgcagcgcgccaccaacggcggactcctcatcgcggaggccactgtcatc 125677

                            
Query: 267    tcgcccaccgcgca 280
              || |||||||||||
Sbjct: 125676 tcccccaccgcgca 125663



 Score =  161 bits (81), Expect = 1e-36
 Identities = 123/137 (89%)
 Strand = Plus / Minus

                                                                          
Query: 112    acaagatggggcagttcgagctctcccaccgggtggtgctcgcgccgctcacgaggtgcc 171
              |||||||||||| |||||||||||||||||| ||||||||||||||||| ||  ||||||
Sbjct: 117412 acaagatggggcggttcgagctctcccaccgcgtggtgctcgcgccgctgactcggtgcc 117353

                                                                          
Query: 172    gctcctatgccaacgtgccccagccgcacgcggcggtgtactactcgcagcgggccacca 231
              ||||||| | | ||||||| ||||||||||||||| |||||||||||||||| |||||||
Sbjct: 117352 gctcctacgaccacgtgccacagccgcacgcggcgctgtactactcgcagcgcgccacca 117293

                               
Query: 232    agggcggcttgctcatc 248
              | |||||| | ||||||
Sbjct: 117292 atggcggcctcctcatc 117276



 Score =  161 bits (81), Expect = 1e-36
 Identities = 153/177 (86%)
 Strand = Plus / Minus

                                                                          
Query: 92     gatcccgttgctgacgccccacaagatggggcagttcgagctctcccaccgggtggtgct 151
              ||||||| ||||||||||  |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 107819 gatcccgctgctgacgccgtacaagatggggcggttcgagctctcccaccgtgtggtgct 107760

                                                                          
Query: 152    cgcgccgctcacgaggtgccgctcctatgccaacgtgccccagccgcacgcggcggtgta 211
              ||||||||||||| ||  ||||||||| | ||||||||| | ||||||||||| | ||||
Sbjct: 107759 cgcgccgctcacgcggaaccgctcctacggcaacgtgccgcggccgcacgcggtgctgta 107700

                                                                       
Query: 212    ctactcgcagcgggccaccaagggcggcttgctcatcagcgaggccactggcgtctc 268
              |||| ||||||| |||||||  |||||| | ||| |||  |||||||| ||||||||
Sbjct: 107699 ctacacgcagcgcgccaccagcggcggcctcctcgtcacggaggccaccggcgtctc 107643



 Score =  121 bits (61), Expect = 1e-24
 Identities = 127/149 (85%)
 Strand = Plus / Minus

                                                                         
Query: 132   ctctcccaccgggtggtgctcgcgccgctcacgaggtgccgctcctatgccaacgtgccc 191
             ||||||||||| ||| ||||||||||| | ||| ||||||| ||||| | ||||||||| 
Sbjct: 91906 ctctcccaccgtgtgctgctcgcgccgatgacgcggtgccgatcctacggcaacgtgccg 91847

                                                                         
Query: 192   cagccgcacgcggcggtgtactactcgcagcgggccaccaagggcggcttgctcatcagc 251
             ||||||||||||||| |||||||| ||||||| ||||||   |||||| | |||||||  
Sbjct: 91846 cagccgcacgcggcgctgtactacacgcagcgcgccacccgcggcggcctcctcatcacg 91787

                                          
Query: 252   gaggccactggcgtctcgcccaccgcgca 280
             |||||||| ||||||||  ||||||||||
Sbjct: 91786 gaggccaccggcgtctccgccaccgcgca 91758



 Score =  115 bits (58), Expect = 8e-23
 Identities = 121/142 (85%)
 Strand = Plus / Minus

                                                                         
Query: 127   tcgagctctcccaccgggtggtgctcgcgccgctcacgaggtgccgctcctatgccaacg 186
             |||| ||||||||||| ||| ||||| ||||| | ||| ||||||| ||||| | |||||
Sbjct: 97581 tcgatctctcccaccgtgtgctgctctcgccgatgacgcggtgccgatcctacggcaacg 97522

                                                                         
Query: 187   tgccccagccgcacgcggcggtgtactactcgcagcgggccaccaagggcggcttgctca 246
             |||| ||||||||||||||| |||||||| ||||||| |||||||  |||||| | ||||
Sbjct: 97521 tgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagcggcggcctcctca 97462

                                   
Query: 247   tcagcgaggccactggcgtctc 268
             |||  |||||||| ||||||||
Sbjct: 97461 tcacggaggccaccggcgtctc 97440



to top

>dbj|AB122088.1| Oryza sativa (japonica cultivar-group) OPDAR1  gene for
            12-oxo-phytodienoic acid reductase, complete cds
          Length = 2492

 Score =  214 bits (108), Expect = 1e-52
 Identities = 171/192 (89%)
 Strand = Plus / Plus

                                                                        
Query: 89   ggcgatcccgttgctgacgccccacaagatggggcagttcgagctctcccaccgggtggt 148
            |||||||||| ||||||||||  |||||||||||||| | |||||||||||||| |||||
Sbjct: 1089 ggcgatcccgctgctgacgccgtacaagatggggcagctggagctctcccaccgtgtggt 1148

                                                                        
Query: 149  gctcgcgccgctcacgaggtgccgctcctatgccaacgtgccccagccgcacgcggcggt 208
            |||||||||||||||| ||||||||||||| | ||||||||| |||||||||||||||||
Sbjct: 1149 gctcgcgccgctcacgcggtgccgctcctacggcaacgtgccgcagccgcacgcggcggt 1208

                                                                        
Query: 209  gtactactcgcagcgggccaccaagggcggcttgctcatcagcgaggccactggcgtctc 268
            |||||||||||||||||| |||| ||||||| | ||||||   |||||||| | | ||||
Sbjct: 1209 gtactactcgcagcgggcgaccaggggcggcctcctcatcgcggaggccaccgacatctc 1268

                        
Query: 269  gcccaccgcgca 280
             |||||||||||
Sbjct: 1269 ccccaccgcgca 1280



to top

>dbj|AK103067.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117P12, full
           insert sequence
          Length = 1520

 Score =  214 bits (108), Expect = 1e-52
 Identities = 171/192 (89%)
 Strand = Plus / Plus

                                                                       
Query: 89  ggcgatcccgttgctgacgccccacaagatggggcagttcgagctctcccaccgggtggt 148
           |||||||||| ||||||||||  |||||||||||||| | |||||||||||||| |||||
Sbjct: 141 ggcgatcccgctgctgacgccgtacaagatggggcagctggagctctcccaccgtgtggt 200

                                                                       
Query: 149 gctcgcgccgctcacgaggtgccgctcctatgccaacgtgccccagccgcacgcggcggt 208
           |||||||||||||||| ||||||||||||| | ||||||||| |||||||||||||||||
Sbjct: 201 gctcgcgccgctcacgcggtgccgctcctacggcaacgtgccgcagccgcacgcggcggt 260

                                                                       
Query: 209 gtactactcgcagcgggccaccaagggcggcttgctcatcagcgaggccactggcgtctc 268
           |||||||||||||||||| |||| ||||||| | ||||||   |||||||| | | ||||
Sbjct: 261 gtactactcgcagcgggcgaccaggggcggcctcctcatcgcggaggccaccgacatctc 320

                       
Query: 269 gcccaccgcgca 280
            |||||||||||
Sbjct: 321 ccccaccgcgca 332



to top

>dbj|AB040743.1| Oryza sativa RRJ4 mRNA for 12-oxophytodienoic acid reductase,
           complete cds
          Length = 1384

 Score =  214 bits (108), Expect = 1e-52
 Identities = 171/192 (89%)
 Strand = Plus / Plus

                                                                       
Query: 89  ggcgatcccgttgctgacgccccacaagatggggcagttcgagctctcccaccgggtggt 148
           |||||||||| ||||||||||  |||||||||||||| | |||||||||||||| |||||
Sbjct: 113 ggcgatcccgctgctgacgccgtacaagatggggcagctggagctctcccaccgtgtggt 172

                                                                       
Query: 149 gctcgcgccgctcacgaggtgccgctcctatgccaacgtgccccagccgcacgcggcggt 208
           |||||||||||||||| ||||||||||||| | ||||||||| |||||||||||||||||
Sbjct: 173 gctcgcgccgctcacgcggtgccgctcctacggcaacgtgccgcagccgcacgcggcggt 232

                                                                       
Query: 209 gtactactcgcagcgggccaccaagggcggcttgctcatcagcgaggccactggcgtctc 268
           |||||||||||||||||| |||| ||||||| | ||||||   |||||||| | | ||||
Sbjct: 233 gtactactcgcagcgggcgaccaggggcggcctcctcatcgcggaggccaccgacatctc 292

                       
Query: 269 gcccaccgcgca 280
            |||||||||||
Sbjct: 293 ccccaccgcgca 304



to top

>gb|AY921639.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR2) mRNA, complete
           cds
          Length = 1409

 Score =  200 bits (101), Expect = 2e-48
 Identities = 173/197 (87%)
 Strand = Plus / Plus

                                                                       
Query: 84  aaggaggcgatcccgttgctgacgccccacaagatggggcagttcgagctctcccaccgg 143
           ||||||| ||||||| ||||||||||  ||||||||||||||||||||||||| ||||||
Sbjct: 104 aaggaggtgatcccgctgctgacgccttacaagatggggcagttcgagctctctcaccgg 163

                                                                       
Query: 144 gtggtgctcgcgccgctcacgaggtgccgctcctatgccaacgtgccccagccgcacgcg 203
           |||||||| |||||||| ||||||||||||||||| | ||||||||| ||||| ||||| 
Sbjct: 164 gtggtgctggcgccgctgacgaggtgccgctcctacggcaacgtgccgcagccacacgcc 223

                                                                       
Query: 204 gcggtgtactactcgcagcgggccaccaagggcggcttgctcatcagcgaggccactggc 263
           || ||||||||||||||||| ||||||| ||| ||| ||||||||   |||||||| || 
Sbjct: 224 gccgtgtactactcgcagcgcgccaccaggggtggcctgctcatcgcggaggccacgggg 283

                            
Query: 264 gtctcgcccaccgcgca 280
           || ||| ||||||||||
Sbjct: 284 gtgtcggccaccgcgca 300



to top

>gb|AY921638.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR1) mRNA, complete
           cds
          Length = 1465

 Score =  192 bits (97), Expect = 4e-46
 Identities = 172/197 (87%)
 Strand = Plus / Plus

                                                                       
Query: 84  aaggaggcgatcccgttgctgacgccccacaagatggggcagttcgagctctcccaccgg 143
           ||||||| ||||||| ||||||||||  ||||||||||||||||||||||||| ||||||
Sbjct: 119 aaggaggtgatcccgctgctgacgccttacaagatggggcagttcgagctctctcaccgg 178

                                                                       
Query: 144 gtggtgctcgcgccgctcacgaggtgccgctcctatgccaacgtgccccagccgcacgcg 203
           |||||||| |||||||| ||||||||||||||||| | ||||||||| ||||| ||||| 
Sbjct: 179 gtggtgctggcgccgctgacgaggtgccgctcctacggcaacgtgccgcagccacacgcc 238

                                                                       
Query: 204 gcggtgtactactcgcagcgggccaccaagggcggcttgctcatcagcgaggccactggc 263
           || ||||||||||| ||||| ||||||| ||| ||| ||||||||   |||||||| || 
Sbjct: 239 gccgtgtactactcccagcgcgccaccaggggtggcctgctcatcgcggaggccacgggg 298

                            
Query: 264 gtctcgcccaccgcgca 280
           || ||| ||||||||||
Sbjct: 299 gtgtcggccaccgcgca 315



to top

>gb|AY108052.1| Zea mays PCO079165 mRNA sequence
          Length = 1489

 Score =  192 bits (97), Expect = 4e-46
 Identities = 172/197 (87%)
 Strand = Plus / Plus

                                                                       
Query: 84  aaggaggcgatcccgttgctgacgccccacaagatggggcagttcgagctctcccaccgg 143
           ||||||| ||||||| ||||||||||  ||||||||||||||||||||||||| ||||||
Sbjct: 141 aaggaggtgatcccgctgctgacgccttacaagatggggcagttcgagctctctcaccgg 200

                                                                       
Query: 144 gtggtgctcgcgccgctcacgaggtgccgctcctatgccaacgtgccccagccgcacgcg 203
           |||||||| |||||||| ||||||||||||||||| | ||||||||| ||||| ||||| 
Sbjct: 201 gtggtgctggcgccgctgacgaggtgccgctcctacggcaacgtgccgcagccacacgcc 260

                                                                       
Query: 204 gcggtgtactactcgcagcgggccaccaagggcggcttgctcatcagcgaggccactggc 263
           || ||||||||||| ||||| ||||||| ||| ||| ||||||||   |||||||| || 
Sbjct: 261 gccgtgtactactcccagcgcgccaccaggggtggcctgctcatcgcggaggccacgggg 320

                            
Query: 264 gtctcgcccaccgcgca 280
           || ||| ||||||||||
Sbjct: 321 gtgtcggccaccgcgca 337



to top

>dbj|AK105590.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-129-A06, full
           insert sequence
          Length = 1311

 Score =  161 bits (81), Expect = 1e-36
 Identities = 153/177 (86%)
 Strand = Plus / Plus

                                                                       
Query: 92  gatcccgttgctgacgccccacaagatggggcagttcgagctctcccaccgggtggtgct 151
           ||||||| ||||||||||  |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 121 gatcccgctgctgacgccgtacaagatggggcggttcgagctctcccaccgtgtggtgct 180

                                                                       
Query: 152 cgcgccgctcacgaggtgccgctcctatgccaacgtgccccagccgcacgcggcggtgta 211
           ||||||||||||| ||  ||||||||| | ||||||||| | ||||||||||| | ||||
Sbjct: 181 cgcgccgctcacgcggaaccgctcctacggcaacgtgccgcggccgcacgcggtgctgta 240

                                                                    
Query: 212 ctactcgcagcgggccaccaagggcggcttgctcatcagcgaggccactggcgtctc 268
           |||| ||||||| |||||||  |||||| | ||| |||  |||||||| ||||||||
Sbjct: 241 ctacacgcagcgcgccaccagcggcggcctcctcgtcacggaggccaccggcgtctc 297



to top

>dbj|AK104256.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-E01, full
           insert sequence
          Length = 1281

 Score =  131 bits (66), Expect = 1e-27
 Identities = 123/142 (86%)
 Strand = Plus / Plus

                                                                       
Query: 127 tcgagctctcccaccgggtggtgctcgcgccgctcacgaggtgccgctcctatgccaacg 186
           |||| ||||||||||||||||||||| ||||| | ||| ||||||| ||||| | |||||
Sbjct: 153 tcgatctctcccaccgggtggtgctctcgccgatgacgcggtgccgatcctacggcaacg 212

                                                                       
Query: 187 tgccccagccgcacgcggcggtgtactactcgcagcgggccaccaagggcggcttgctca 246
           |||| ||||||||||||||| |||||||| ||||||| |||||||  |||||| | ||||
Sbjct: 213 tgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagcggcggcctcctca 272

                                 
Query: 247 tcagcgaggccactggcgtctc 268
           |||  |||||||| ||||||||
Sbjct: 273 tcacggaggccaccggcgtctc 294



to top

>dbj|AK104193.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D11, full
           insert sequence
          Length = 1281

 Score =  131 bits (66), Expect = 1e-27
 Identities = 123/142 (86%)
 Strand = Plus / Plus

                                                                       
Query: 127 tcgagctctcccaccgggtggtgctcgcgccgctcacgaggtgccgctcctatgccaacg 186
           |||| ||||||||||||||||||||| ||||| | ||| ||||||| ||||| | |||||
Sbjct: 153 tcgatctctcccaccgggtggtgctctcgccgatgacgcggtgccgatcctacggcaacg 212

                                                                       
Query: 187 tgccccagccgcacgcggcggtgtactactcgcagcgggccaccaagggcggcttgctca 246
           |||| ||||||||||||||| |||||||| ||||||| |||||||  |||||| | ||||
Sbjct: 213 tgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagcggcggcctcctca 272

                                 
Query: 247 tcagcgaggccactggcgtctc 268
           |||  |||||||| ||||||||
Sbjct: 273 tcacggaggccaccggcgtctc 294



to top

>dbj|AK104039.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-G06, full
           insert sequence
          Length = 1422

 Score =  131 bits (66), Expect = 1e-27
 Identities = 123/142 (86%)
 Strand = Plus / Plus

                                                                       
Query: 127 tcgagctctcccaccgggtggtgctcgcgccgctcacgaggtgccgctcctatgccaacg 186
           |||| ||||||||||||||||||||| ||||| | ||| ||||||| ||||| | |||||
Sbjct: 148 tcgatctctcccaccgggtggtgctctcgccgatgacgcggtgccgatcctacggcaacg 207

                                                                       
Query: 187 tgccccagccgcacgcggcggtgtactactcgcagcgggccaccaagggcggcttgctca 246
           |||| ||||||||||||||| |||||||| ||||||| |||||||  |||||| | ||||
Sbjct: 208 tgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagcggcggcctcctca 267

                                 
Query: 247 tcagcgaggccactggcgtctc 268
           |||  |||||||| ||||||||
Sbjct: 268 tcacggaggccaccggcgtctc 289



to top

>dbj|AK108079.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-E09, full
           insert sequence
          Length = 1517

 Score =  121 bits (61), Expect = 1e-24
 Identities = 127/149 (85%)
 Strand = Plus / Plus

                                                                       
Query: 132 ctctcccaccgggtggtgctcgcgccgctcacgaggtgccgctcctatgccaacgtgccc 191
           ||||||||||| ||| ||||||||||| | ||| ||||||| ||||| | ||||||||| 
Sbjct: 236 ctctcccaccgtgtgctgctcgcgccgatgacgcggtgccgatcctacggcaacgtgccg 295

                                                                       
Query: 192 cagccgcacgcggcggtgtactactcgcagcgggccaccaagggcggcttgctcatcagc 251
           ||||||||||||||| |||||||| ||||||| ||||||   |||||| | |||||||  
Sbjct: 296 cagccgcacgcggcgctgtactacacgcagcgcgccacccgcggcggcctcctcatcacg 355

                                        
Query: 252 gaggccactggcgtctcgcccaccgcgca 280
           |||||||| ||||||||  ||||||||||
Sbjct: 356 gaggccaccggcgtctccgccaccgcgca 384



to top

>dbj|AK072596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125E21, full
           insert sequence
          Length = 1295

 Score =  115 bits (58), Expect = 8e-23
 Identities = 88/98 (89%)
 Strand = Plus / Plus

                                                                       
Query: 92  gatcccgttgctgacgccccacaagatggggcagttcgagctctcccaccgggtggtgct 151
           ||||||| ||||||||||  |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 122 gatcccgctgctgacgccgtacaagatggggcggttcgagctctcccaccgtgtggtgct 181

                                                 
Query: 152 cgcgccgctcacgaggtgccgctcctatgccaacgtgc 189
           ||||||||||||| ||  ||||||||| | ||||||||
Sbjct: 182 cgcgccgctcacgcggaaccgctcctacggcaacgtgc 219



to top

>dbj|AK061212.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-D07, full
           insert sequence
          Length = 1434

 Score =  115 bits (58), Expect = 8e-23
 Identities = 121/142 (85%)
 Strand = Plus / Plus

                                                                       
Query: 127 tcgagctctcccaccgggtggtgctcgcgccgctcacgaggtgccgctcctatgccaacg 186
           |||| ||||||||||| ||| ||||| ||||| | ||| ||||||| ||||| | |||||
Sbjct: 153 tcgatctctcccaccgtgtgctgctctcgccgatgacgcggtgccgatcctacggcaacg 212

                                                                       
Query: 187 tgccccagccgcacgcggcggtgtactactcgcagcgggccaccaagggcggcttgctca 246
           |||| ||||||||||||||| |||||||| ||||||| |||||||  |||||| | ||||
Sbjct: 213 tgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagcggcggcctcctca 272

                                 
Query: 247 tcagcgaggccactggcgtctc 268
           |||  |||||||| ||||||||
Sbjct: 273 tcacggaggccaccggcgtctc 294



to top

>gb|AY921640.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR3) mRNA, complete
           cds
          Length = 1431

 Score =  113 bits (57), Expect = 3e-22
 Identities = 141/169 (83%)
 Strand = Plus / Plus

                                                                       
Query: 112 acaagatggggcagttcgagctctcccaccgggtggtgctcgcgccgctcacgaggtgcc 171
           |||||||||||||| | |||||||||||||| |||||||| |||||| | ||| ||||||
Sbjct: 114 acaagatggggcagctggagctctcccaccgcgtggtgctggcgccgatgacgcggtgcc 173

                                                                       
Query: 172 gctcctatgccaacgtgccccagccgcacgcggcggtgtactactcgcagcgggccacca 231
           || ||   |   ||||||| ||||||||||| || ||||||||||||||||| |||| ||
Sbjct: 174 gcgccatcggggacgtgccgcagccgcacgccgccgtgtactactcgcagcgcgccagca 233

                                                            
Query: 232 agggcggcttgctcatcagcgaggccactggcgtctcgcccaccgcgca 280
            ||||||| ||||||||| ||||| ||| || || ||  ||||||||||
Sbjct: 234 ggggcggcgtgctcatcaccgagggcacgggggtgtccgccaccgcgca 282



to top

>emb|AJ557139.1|OSA557139 Oryza sativa (japonica cultivar-group) partial mRNA for
           oxo-phytodienoic acid reductase (opda2 gene)
          Length = 1248

 Score =  107 bits (54), Expect = 2e-20
 Identities = 96/110 (87%)
 Strand = Plus / Plus

                                                                       
Query: 171 cgctcctatgccaacgtgccccagccgcacgcggcggtgtactactcgcagcgggccacc 230
           |||||||| | ||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 1   cgctcctacggcaacgtgccgcagccgcacgcggcggtgtactactcgcagcgggcgacc 60

                                                             
Query: 231 aagggcggcttgctcatcagcgaggccactggcgtctcgcccaccgcgca 280
           | ||||||| | ||||||   |||||||| | | |||| |||||||||||
Sbjct: 61  aggggcggcctcctcatcgcggaggccaccgacatctcccccaccgcgca 110



to top

>gb|AY921645.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR8) mRNA, complete
           cds
          Length = 1529

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 204 gcggtgtactactcgcagcgggccaccaagggcggcttgctcatc 248
           |||| ||||||| |||||||| ||||  | |||||||||||||||
Sbjct: 263 gcggagtactacgcgcagcggtccacggaaggcggcttgctcatc 307



to top

>gb|AY921644.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR7) mRNA, complete
           cds
          Length = 1594

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 204 gcggtgtactactcgcagcgggccaccaagggcggcttgctcatc 248
           |||| ||||||| |||||||| ||||  | |||||||||||||||
Sbjct: 399 gcggagtactacgcgcagcggtccacggacggcggcttgctcatc 443



to top

>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 157   cgctcacgaggtgccgctcct 177
             |||||||||||||||||||||
Sbjct: 72983 cgctcacgaggtgccgctcct 72963



to top

>ref|XM_506828.1| PREDICTED Oryza sativa (japonica cultivar-group), P0435E12.12 mRNA
          Length = 1334

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 208 tgtactactcgcagcgggccaccaagggcggc 239
           |||||||||||||| ||||||| || ||||||
Sbjct: 276 tgtactactcgcagagggccacaaatggcggc 307



to top

>ref|XM_466236.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1250

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 208 tgtactactcgcagcgggccaccaagggcggc 239
           |||||||||||||| ||||||| || ||||||
Sbjct: 190 tgtactactcgcagagggccacaaatggcggc 221



to top

>gb|AC012647.18| Trypanosoma brucei chromosome 2 clone RPCI93-27H14, complete sequence
          Length = 118437

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    catcatatttgctgcatata 41
             ||||||||||||||||||||
Sbjct: 42303 catcatatttgctgcatata 42284



to top

>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence
          Length = 1193948

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 22     catcatatttgctgcatata 41
              ||||||||||||||||||||
Sbjct: 309239 catcatatttgctgcatata 309258



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 208      tgtactactcgcagcgggccaccaagggcggc 239
                |||||||||||||| ||||||| || ||||||
Sbjct: 21250147 tgtactactcgcagagggccacaaatggcggc 21250116



to top

>ref|XM_231528.3| PREDICTED: Rattus norvegicus similar to Ca2+-dependent activator for
            secretion protein 2 (LOC312166), mRNA
          Length = 4961

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 233  gggcggcttgctcatcagcg 252
            ||||||||||||||||||||
Sbjct: 1106 gggcggcttgctcatcagcg 1087



to top

>dbj|AP005883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0435E12
          Length = 143188

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 208   tgtactactcgcagcgggccaccaagggcggc 239
             |||||||||||||| ||||||| || ||||||
Sbjct: 32682 tgtactactcgcagagggccacaaatggcggc 32651



to top

>dbj|AK069898.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036E18, full
           insert sequence
          Length = 1334

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 208 tgtactactcgcagcgggccaccaagggcggc 239
           |||||||||||||| ||||||| || ||||||
Sbjct: 276 tgtactactcgcagagggccacaaatggcggc 307



to top

>dbj|AK059887.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-B12, full
           insert sequence
          Length = 1250

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 208 tgtactactcgcagcgggccaccaagggcggc 239
           |||||||||||||| ||||||| || ||||||
Sbjct: 190 tgtactactcgcagagggccacaaatggcggc 221



to top

>gb|U45966.1|HGU45966 Hepatitis G virus isolate R10291, complete genome
          Length = 9103

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 67   ccaacaagatggtggccaaggagg 90
            |||||||||||||| |||||||||
Sbjct: 5721 ccaacaagatggtgaccaaggagg 5698


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,658,669
Number of Sequences: 3902068
Number of extensions: 1658669
Number of successful extensions: 31210
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 31113
Number of HSP's gapped (non-prelim): 97
length of query: 280
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 258
effective length of database: 17,147,199,772
effective search space: 4423977541176
effective search space used: 4423977541176
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top