ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast48d12 |
|---|---|
| Clone Library Name | barley_pub |
>NRG2_HUMAN (O14511) Pro-neuregulin-2, membrane-bound isoform precursor| (Pro-NRG2) [Contains: Neuregulin-2 (NRG-2) (Neural- and thymus-derived activator for ERBB kinases) (NTAK) (Divergent of neuregulin-1) (DON-1)] Length = 850 Score = 33.9 bits (76), Expect = 0.11 Identities = 15/34 (44%), Positives = 24/34 (70%) Frame = -3 Query: 240 CCSAAPPPGDDAFRCSSDAGTSSRAAKFSGSANT 139 CCSA PPP + RCSS + +SS +++ S S+++ Sbjct: 5 CCSALPPPPLEKGRCSSYSDSSSSSSERSSSSSS 38
>NRG2_RAT (O35569) Pro-neuregulin-2, membrane-bound isoform precursor| (Pro-NRG2) [Contains: Neuregulin-2 (NRG-2) (Neural- and thymus-derived activator for ERBB kinases) (NTAK)] Length = 868 Score = 32.7 bits (73), Expect = 0.25 Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 4/50 (8%) Frame = -3 Query: 240 CCSAAPPPGDDAFRCS----SDAGTSSRAAKFSGSANTLCDARRWWRPSR 103 CCSA PPP + A RCS SD+ +SS + S S ++ +R R SR Sbjct: 5 CCSALPPPLEKA-RCSSYSYSDSSSSSSSNNSSSSTSSRSSSRSSSRSSR 53
>YOR2_EAVBU (P28992) Hypothetical 25.6 kDa protein (ORF2)| Length = 227 Score = 30.4 bits (67), Expect = 1.3 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%) Frame = -3 Query: 159 FSGSANTLCDARRWWR---PSRCDDMLSELRCVNARTRGFDPALG 34 FSGS L A WWR R D+ +L+C N R + P+LG Sbjct: 19 FSGSL--LPSAAAWWRGVHEVRVTDLFKDLQCDNLRAKDAFPSLG 61
>BCCP_PSEAE (P37799) Biotin carboxyl carrier protein of acetyl-CoA carboxylase| (BCCP) Length = 156 Score = 30.0 bits (66), Expect = 1.6 Identities = 19/50 (38%), Positives = 25/50 (50%) Frame = +2 Query: 86 ESMSSQRLGRHQRRASQSVFALPENFAALDDVPASDEHRKASSPGGGAAE 235 E S R+ RH + A+Q V+A FAA PA A++P AAE Sbjct: 25 EGEESVRISRHSKTAAQPVYAQAPAFAAPVAAPAP----AAAAPAAAAAE 70
>MTMR3_MOUSE (Q8K296) Myotubularin-related protein 3 (EC 3.1.3.48)| Length = 1075 Score = 29.6 bits (65), Expect = 2.1 Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 14/88 (15%) Frame = +2 Query: 8 PSPTFTQSDPSAGSKPRVRAFTHL--------------SSESMSSQRLGRHQRRASQSVF 145 P P + +P P+ R+F +L SS+ +++ H R S F Sbjct: 594 PVPGTSPDEPPLSRLPKTRSFDNLTTTCENMVPLASRRSSDPSLNEKWQEHGRSLELSSF 653 Query: 146 ALPENFAALDDVPASDEHRKASSPGGGA 229 A +A ++VPA D RK S GGA Sbjct: 654 A-----SAGEEVPAMDSLRKPSRLLGGA 676
>TISD_MOUSE (P23949) Butyrate response factor 2 (TIS11D protein)| Length = 367 Score = 29.6 bits (65), Expect = 2.1 Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 13/79 (16%) Frame = -3 Query: 225 PPPGDDAFRCSSDAG--TSSRAAKFSGSANTLC----DARRWWRPSRCDDMLSE-LRCVN 67 PPP A CSS A +S+ AA A T C A + P +D+LS C + Sbjct: 264 PPPSSSASSCSSSASSCSSASAASTPSGAPTCCATAAAAALLYGPGGAEDLLSPGAPCAS 323 Query: 66 ARTRG------FDPALGSL 28 + G F P L SL Sbjct: 324 CSSSGANNAFAFGPELSSL 342
>GLND_KLEOX (P41393) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 887 Score = 29.3 bits (64), Expect = 2.8 Identities = 16/44 (36%), Positives = 20/44 (45%) Frame = -3 Query: 138 LCDARRWWRPSRCDDMLSELRCVNARTRGFDPALGSLWVNVGDG 7 L DA + W D ++ R + ART D L LWV G G Sbjct: 36 LIDAFQRWLGEAFDSGIAAERLIEARTEFIDQLLQRLWVEYGFG 79
>PKL_ARATH (Q9S775) CHD3-type chromatin remodeling factor PICKLE (EC 3.6.1.-)| (Protein GYMNOS) Length = 1384 Score = 28.9 bits (63), Expect = 3.7 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 7/78 (8%) Frame = +2 Query: 26 QSDPSAGSKPRVRAFTHLSSESMSSQR------LGRHQRRASQSVFALPENFAALDDVPA 187 +S SAG+ R + L + + LG+ +R Q V ++ A L+DV + Sbjct: 841 ESKSSAGNSDRASYWEELLKDKFELHQAEELNALGKRKRSRKQLVSIEEDDLAGLEDVSS 900 Query: 188 -SDEHRKASSPGGGAAEQ 238 DE +A S G AA Q Sbjct: 901 DGDESYEAESTDGEAAGQ 918
>RIPK5_CANFA (Q4VSN4) Receptor-interacting serine/threonine-protein kinase 5 (EC| 2.7.11.1) (Dusty protein kinase) (Dusty PK) Length = 931 Score = 28.5 bits (62), Expect = 4.8 Identities = 16/43 (37%), Positives = 19/43 (44%) Frame = +2 Query: 110 GRHQRRASQSVFALPENFAALDDVPASDEHRKASSPGGGAAEQ 238 GRH+R Q L E D+ S H SSP GG A + Sbjct: 34 GRHRRYLGQLRQNLRETQKFFRDIKCSHSHSCPSSPAGGGAAE 76
>CAC1I_HUMAN (Q9P0X4) Voltage-dependent T-type calcium channel alpha-1I subunit| (Voltage-gated calcium channel alpha subunit Cav3.3) (Ca(v)3.3) Length = 2223 Score = 28.5 bits (62), Expect = 4.8 Identities = 19/68 (27%), Positives = 27/68 (39%) Frame = +2 Query: 35 PSAGSKPRVRAFTHLSSESMSSQRLGRHQRRASQSVFALPENFAALDDVPASDEHRKASS 214 P AG P R L + S R R +R+ S + D + SDE + + Sbjct: 2055 PRAGLSPAARRRLSLRGRGLFSLRGLRAHQRSHSSGGSTSPGCTHHDSMDPSDEEGRGGA 2114 Query: 215 PGGGAAEQ 238 GGGA + Sbjct: 2115 GGGGAGSE 2122
>THRC_BACSU (P04990) Threonine synthase (EC 4.2.3.1)| Length = 352 Score = 28.1 bits (61), Expect = 6.2 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = -3 Query: 228 APPPGDDAFRCSSDAGTSSRAAKFSGSANTLC 133 A G+D C+S TS+ AA ++ AN C Sbjct: 70 AKEEGNDTIMCASTGNTSAAAAAYAARANMKC 101
>FHR5_HUMAN (Q9BXR6) Complement factor H-related protein 5 precursor (FHR-5)| Length = 569 Score = 28.1 bits (61), Expect = 6.2 Identities = 15/47 (31%), Positives = 18/47 (38%) Frame = -3 Query: 234 SAAPPPGDDAFRCSSDAGTSSRAAKFSGSANTLCDARRWWRPSRCDD 94 S PP +RC S K GS C ++W P RC D Sbjct: 466 SVYPPGSTVTYRCQS-------FYKLQGSVTVTCRNKQWSEPPRCLD 505
>LAMA2_HUMAN (P24043) Laminin alpha-2 chain precursor (Laminin M chain) (Merosin| heavy chain) Length = 3110 Score = 28.1 bits (61), Expect = 6.2 Identities = 17/49 (34%), Positives = 24/49 (48%) Frame = -3 Query: 243 CCCSAAPPPGDDAFRCSSDAGTSSRAAKFSGSANTLCDARRWWRPSRCD 97 C CS G F+C+ + G + KFSG+ T C +R W RC+ Sbjct: 1060 CNCSTV---GSLDFQCNVNTGQCNCHPKFSGAKCTEC-SRGHWNYPRCN 1104
>BRC2_HALRO (O01409) T-box-containing protein 2 (AS-T2)| Length = 681 Score = 28.1 bits (61), Expect = 6.2 Identities = 16/55 (29%), Positives = 25/55 (45%) Frame = +2 Query: 53 PRVRAFTHLSSESMSSQRLGRHQRRASQSVFALPENFAALDDVPASDEHRKASSP 217 P +FT+ +S S SS + AS SV +++D+ EH +SP Sbjct: 467 PHDNSFTYYNSSSPSSSDSNQSNVNASFSVMTTTHASHSINDIMRISEHADVTSP 521
>KPTA_BACHK (Q6HH75) Probable RNA 2'-phosphotransferase (EC 2.7.-.-)| Length = 185 Score = 28.1 bits (61), Expect = 6.2 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = +2 Query: 11 SPTFTQSDPSAGSKPRVRAFTHLSSESMSSQRLGRHQ 121 SP F S S G P R + HLS + ++++ +G+ + Sbjct: 105 SPRFLNSIESNGLSPMSRQYVHLSEDIITAELVGKRK 141
>UL25_EHV1B (P28928) Virion protein UL25| Length = 587 Score = 27.7 bits (60), Expect = 8.2 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 10/89 (11%) Frame = +2 Query: 14 PTFTQSDPSAGSKPRVRAFTHLSSESMSSQRLGRHQ----------RRASQSVFALPENF 163 PTFT S + ++ A H ++ + + Q R + V + + Sbjct: 42 PTFTVSSNTRADPLKLVAARHRAAAAAIDTLEAQSQYGVANVDALIRPLERQVAKVADAL 101 Query: 164 AALDDVPASDEHRKASSPGGGAAEQQQRP 250 AAL+D + E A++P A+E QRP Sbjct: 102 AALEDAARAAESADAATPQVNASEADQRP 130
>BAR3_CHITE (Q03376) Balbiani ring protein 3 precursor| Length = 1700 Score = 27.7 bits (60), Expect = 8.2 Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 2/60 (3%) Frame = -3 Query: 246 RCCCSAAPPPGDDA--FRCSSDAGTSSRAAKFSGSANTLCDARRWWRPSRCDDMLSELRC 73 RC C A P G + + D + + AK ++ + W P+ C+ ++L C Sbjct: 220 RCICPTAEPAGGCSAPLKWDDDKCSCACPAKMEEKKEKCVESGKIWNPNTCECGCAQLNC 279
>KCNAS_DROME (P08510) Potassium voltage-gated channel protein Shaker| Length = 655 Score = 27.7 bits (60), Expect = 8.2 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 5/66 (7%) Frame = +2 Query: 68 FTHLSSESMSSQRLGRHQRRASQS-----VFALPENFAALDDVPASDEHRKASSPGGGAA 232 F H++S LG+H +++S S + L + + + + R A +P GA Sbjct: 499 FNHVTSCPYLPGTLGQHMKKSSLSESSSDMMDLDDGVESTPGLTETHPGRSAVAPFLGAQ 558 Query: 233 EQQQRP 250 +QQQ+P Sbjct: 559 QQQQQP 564
>CBLBB_XENLA (Q6NRE7) E3 ubiquitin-protein ligase CBL-B-B (EC 6.3.2.-) (Signal| transduction protein CBL-B-B) (SH3-binding protein CBL-B-B) Length = 764 Score = 27.7 bits (60), Expect = 8.2 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Frame = +2 Query: 5 TPSPTFTQSDPSAGSKPRVRAFTHLSSESM---SSQRLGRHQRRASQSVF 145 TP+ + D S G++P V TH S + SS GRH R ++++ F Sbjct: 599 TPNEAWCTRDLSGGNQPSVCRVTHDGSPKLGVSSSVLNGRHSRVSTEAGF 648 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 28,622,179 Number of Sequences: 219361 Number of extensions: 450746 Number of successful extensions: 2042 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 1974 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2040 length of database: 80,573,946 effective HSP length: 59 effective length of database: 67,631,647 effective search space used: 1623159528 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
