ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast48d09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_197848.1| Oryza sativa (japonica cultivar-group) putative... 468 e-129
2dbj|AK058588.1| Oryza sativa (japonica cultivar-group) cDNA clon... 468 e-129
3dbj|AK102506.1| Oryza sativa (japonica cultivar-group) cDNA clon... 460 e-126
4gb|AY105124.1| Zea mays PCO138363 mRNA sequence 202 8e-49
5dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 184 2e-43
6gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003... 184 2e-43
7gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 184 2e-43
8ref|XM_473713.1| Oryza sativa (japonica cultivar-group), predic... 50 0.007
9gb|AC152498.11| Medicago truncatula clone mth2-38m20, complete s... 50 0.007
10dbj|AB110206.2| Oryza sativa (japonica cultivar-group) mRNA for ... 50 0.007
11dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
12dbj|AK070449.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
13dbj|AK060672.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
14emb|AL662981.3|OSJN00182 Oryza sativa genomic DNA, chromosome 4,... 50 0.007
15ref|XM_750182.1| Aspergillus fumigatus Af293 alpha-N-acetylgluco... 42 1.6
16gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 255... 42 1.6
17gb|AC110520.12| Mus musculus chromosome 7, clone RP23-24N16, com... 40 6.4
18ref|XM_483314.2| Oryza sativa (japonica cultivar-group), mRNA 40 6.4
19ref|XM_483313.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.4
20gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 40 6.4
21gb|AC160464.3| Mus musculus chromosome 7, clone RP23-256J14, com... 40 6.4
22gb|AC105133.6| Homo sapiens chromosome 15, clone CTD-2071N1, com... 40 6.4
23gb|AC063961.10| Homo sapiens chromosome 10 clone RP11-183E9, com... 40 6.4
24dbj|AK081086.1| Mus musculus 10 days neonate cerebellum cDNA, RI... 40 6.4
25dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
26dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
27gb|AC110755.6| Homo sapiens BAC clone CTD-2125K8 from 4, complet... 40 6.4
28dbj|AP006506.1| Mus musculus genomic DNA, chromosome 4, clone: R... 40 6.4
29gb|AC007239.3| Homo sapiens BAC clone RP11-83A12 from 2, complet... 40 6.4
30dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
31dbj|AK105419.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
32dbj|AK101825.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
33dbj|AK067561.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
34gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.4
35emb|AL954364.5|CNS08CCZ Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.4
36gb|AC147559.5| Mus musculus BAC clone RP23-391P1 from 3, complet... 40 6.4
37gb|AC131724.4| Mus musculus BAC clone RP23-129E9 from 19, comple... 40 6.4
38emb|AL611967.21| Mouse DNA sequence from clone RP23-121D17 on ch... 40 6.4

>ref|NM_197848.1| Oryza sativa (japonica cultivar-group) putative AT-Hook DNA-binding
            protein (OSJNBa0003O19.1), mRNA
          Length = 1602

 Score =  468 bits (236), Expect = e-129
 Identities = 401/456 (87%)
 Strand = Plus / Plus

                                                                        
Query: 20   ttcaaaaataatgtccttctcacagcaaggacctcgcacagtttgcattctttcagcaaa 79
            ||||||||| ||| |||||||||||||||| |||||||||||||||||||| ||||| ||
Sbjct: 990  ttcaaaaattatggccttctcacagcaaggccctcgcacagtttgcattctctcagcgaa 1049

                                                                        
Query: 80   tggcgcaataagcaatgtaacacttcggcagccagctacatctggtggactggtgactta 139
            ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1050 tggtgcaataagcaatgtaacacttcggcagccagctacatctggtggacttgtgactta 1109

                                                                        
Query: 140  cgagggtcgatttgagatcatctccctatctggttcattcctgcttgcagaagatggtga 199
             ||||| ||||||||||||||||| ||||| ||||| |||||||||||||| ||||| ||
Sbjct: 1110 tgagggccgatttgagatcatctctctatcaggttctttcctgcttgcagaggatggcga 1169

                                                                        
Query: 200  tactcgtagcaggactggtggattgagcgttgcacttgcaggatctgatggccgggttct 259
             ||||| ||||||||||||||  |||| || ||||||||||||||||||||||| |||||
Sbjct: 1170 cactcgcagcaggactggtggcctgagtgtcgcacttgcaggatctgatggccgagttct 1229

                                                                        
Query: 260  cggtggatgtgtagctgggcagctaacggctgcgacacctgttcaggttgtcgtggctag 319
             |||||||||||||||||   ||| | ||| || || ||||| |||||||||||||||||
Sbjct: 1230 tggtggatgtgtagctggaatgctgatggccgcaacccctgtccaggttgtcgtggctag 1289

                                                                        
Query: 320  tttcatagccgaaggtaaaaaatcaaagcctgctgagccacggaaggttgaaccgatgtc 379
             ||||| || |||||||| ||||| ||||| |  ||| || ||||||| |||||||||||
Sbjct: 1290 cttcatcgcggaaggtaagaaatcgaagccagtcgagacaaggaaggtcgaaccgatgtc 1349

                                                                        
Query: 380  cgcacctccacagatggccacctatgtgccagctccagtggctagccctccctcggaggg 439
             || |||||||||||||| ||||| ||||||||||| ||||| ||||| || ||||||||
Sbjct: 1350 agcgcctccacagatggcaacctacgtgccagctccggtggcgagcccgccatcggaggg 1409

                                                
Query: 440  tacatccagcgcatcatccgatgactctggcagccc 475
             |||||||| | ||| ||||||||||| ||||||||
Sbjct: 1410 cacatccagtggatcgtccgatgactcgggcagccc 1445



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>dbj|AK058588.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-G04, full
           insert sequence
          Length = 1517

 Score =  468 bits (236), Expect = e-129
 Identities = 401/456 (87%)
 Strand = Plus / Plus

                                                                       
Query: 20  ttcaaaaataatgtccttctcacagcaaggacctcgcacagtttgcattctttcagcaaa 79
           ||||||||| ||| |||||||||||||||| |||||||||||||||||||| ||||| ||
Sbjct: 504 ttcaaaaattatggccttctcacagcaaggccctcgcacagtttgcattctctcagcgaa 563

                                                                       
Query: 80  tggcgcaataagcaatgtaacacttcggcagccagctacatctggtggactggtgactta 139
           ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 564 tggtgcaataagcaatgtaacacttcggcagccagctacatctggtggacttgtgactta 623

                                                                       
Query: 140 cgagggtcgatttgagatcatctccctatctggttcattcctgcttgcagaagatggtga 199
            ||||| ||||||||||||||||| ||||| ||||| |||||||||||||| ||||| ||
Sbjct: 624 tgagggccgatttgagatcatctctctatcaggttctttcctgcttgcagaggatggcga 683

                                                                       
Query: 200 tactcgtagcaggactggtggattgagcgttgcacttgcaggatctgatggccgggttct 259
            ||||| ||||||||||||||  |||| || ||||||||||||||||||||||| |||||
Sbjct: 684 cactcgcagcaggactggtggcctgagtgtcgcacttgcaggatctgatggccgagttct 743

                                                                       
Query: 260 cggtggatgtgtagctgggcagctaacggctgcgacacctgttcaggttgtcgtggctag 319
            |||||||||||||||||   ||| | ||| || || ||||| |||||||||||||||||
Sbjct: 744 tggtggatgtgtagctggaatgctgatggccgcaacccctgtccaggttgtcgtggctag 803

                                                                       
Query: 320 tttcatagccgaaggtaaaaaatcaaagcctgctgagccacggaaggttgaaccgatgtc 379
            ||||| || |||||||| ||||| ||||| |  ||| || ||||||| |||||||||||
Sbjct: 804 cttcatcgcggaaggtaagaaatcgaagccagtcgagacaaggaaggtcgaaccgatgtc 863

                                                                       
Query: 380 cgcacctccacagatggccacctatgtgccagctccagtggctagccctccctcggaggg 439
            || |||||||||||||| ||||| ||||||||||| ||||| ||||| || ||||||||
Sbjct: 864 agcgcctccacagatggcaacctacgtgccagctccggtggcgagcccgccatcggaggg 923

                                               
Query: 440 tacatccagcgcatcatccgatgactctggcagccc 475
            |||||||| | ||| ||||||||||| ||||||||
Sbjct: 924 cacatccagtggatcgtccgatgactcgggcagccc 959



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>dbj|AK102506.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095F12, full
           insert sequence
          Length = 1140

 Score =  460 bits (232), Expect = e-126
 Identities = 400/456 (87%)
 Strand = Plus / Plus

                                                                       
Query: 20  ttcaaaaataatgtccttctcacagcaaggacctcgcacagtttgcattctttcagcaaa 79
           ||||||||| ||| |||||||||||||||| |||||||||||||||||||| ||||| ||
Sbjct: 147 ttcaaaaattatggccttctcacagcaaggccctcgcacagtttgcattctctcagcgaa 206

                                                                       
Query: 80  tggcgcaataagcaatgtaacacttcggcagccagctacatctggtggactggtgactta 139
           ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 207 tggtgcaataagcaatgtaacacttcggcagccagctacatctggtggacttgtgactta 266

                                                                       
Query: 140 cgagggtcgatttgagatcatctccctatctggttcattcctgcttgcagaagatggtga 199
            ||||| ||||||||||||||||| ||||| ||||| |||||||||||||| ||||| ||
Sbjct: 267 tgagggccgatttgagatcatctctctatcaggttctttcctgcttgcagaggatggcga 326

                                                                       
Query: 200 tactcgtagcaggactggtggattgagcgttgcacttgcaggatctgatggccgggttct 259
            ||||| ||||||||||||||  |||| || ||||||||||| ||||||||||| |||||
Sbjct: 327 cactcgcagcaggactggtggcctgagtgtcgcacttgcagggtctgatggccgagttct 386

                                                                       
Query: 260 cggtggatgtgtagctgggcagctaacggctgcgacacctgttcaggttgtcgtggctag 319
            |||||||||||||||||   ||| | ||| || || ||||| |||||||||||||||||
Sbjct: 387 tggtggatgtgtagctggaatgctgatggccgcaacccctgtccaggttgtcgtggctag 446

                                                                       
Query: 320 tttcatagccgaaggtaaaaaatcaaagcctgctgagccacggaaggttgaaccgatgtc 379
            ||||| || |||||||| ||||| ||||| |  ||| || ||||||| |||||||||||
Sbjct: 447 cttcatcgcggaaggtaagaaatcgaagccagtcgagacaaggaaggtcgaaccgatgtc 506

                                                                       
Query: 380 cgcacctccacagatggccacctatgtgccagctccagtggctagccctccctcggaggg 439
            || |||||||||||||| ||||| ||||||||||| ||||| ||||| || ||||||||
Sbjct: 507 agcgcctccacagatggcaacctacgtgccagctccggtggcgagcccgccatcggaggg 566

                                               
Query: 440 tacatccagcgcatcatccgatgactctggcagccc 475
            |||||||| | ||| ||||||||||| ||||||||
Sbjct: 567 cacatccagtggatcgtccgatgactcgggcagccc 602



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>gb|AY105124.1| Zea mays PCO138363 mRNA sequence
          Length = 1066

 Score =  202 bits (102), Expect = 8e-49
 Identities = 294/358 (82%)
 Strand = Plus / Plus

                                                                       
Query: 20  ttcaaaaataatgtccttctcacagcaaggacctcgcacagtttgcattctttcagcaaa 79
           ||||||||||||| | |||||||||||||| ||||||||||| ||||| || || || ||
Sbjct: 53  ttcaaaaataatgacattctcacagcaaggccctcgcacagtctgcatcctctcggcgaa 112

                                                                       
Query: 80  tggcgcaataagcaatgtaacacttcggcagccagctacatctggtggactggtgactta 139
           |||||| || ||||| || || |||||||||||||| |||||||||||||| || |||||
Sbjct: 113 tggcgcgattagcaacgttacgcttcggcagccagccacatctggtggactagttactta 172

                                                                       
Query: 140 cgagggtcgatttgagatcatctccctatctggttcattcctgcttgcagaagatggtga 199
            ||||| || || ||||| ||||| || || ||||| |||||||| || || ||||||||
Sbjct: 173 tgaggggcgtttcgagataatctcgctgtccggttctttcctgctcgcggaggatggtga 232

                                                                       
Query: 200 tactcgtagcaggactggtggattgagcgttgcacttgcaggatctgatggccgggttct 259
            ||||| |||||||||||||| |||||||| || || || |||||||| ||||| |||||
Sbjct: 233 cactcgcagcaggactggtggcttgagcgtcgcgctcgcgggatctgacggccgagttct 292

                                                                       
Query: 260 cggtggatgtgtagctgggcagctaacggctgcgacacctgttcaggttgtcgtggctag 319
            || || ||||| |||||   ||| | |||||| || ||||| ||||| || ||||||||
Sbjct: 293 tggagggtgtgtcgctggaatgcttatggctgcaactcctgtccaggtcgtggtggctag 352

                                                                     
Query: 320 tttcatagccgaaggtaaaaaatcaaagcctgctgagccacggaaggttgaaccgatg 377
           ||| || || || || || ||||| ||||| || ||  | |||||||| |||||||||
Sbjct: 353 ttttatcgcagaggggaagaaatctaagccagccgaagcgcggaaggtcgaaccgatg 410



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  184 bits (93), Expect = 2e-43
 Identities = 117/125 (93%)
 Strand = Plus / Minus

                                                                            
Query: 20       ttcaaaaataatgtccttctcacagcaaggacctcgcacagtttgcattctttcagcaaa 79
                ||||||||| ||| |||||||||||||||| |||||||||||||||||||| ||||| ||
Sbjct: 22223302 ttcaaaaattatggccttctcacagcaaggccctcgcacagtttgcattctctcagcgaa 22223243

                                                                            
Query: 80       tggcgcaataagcaatgtaacacttcggcagccagctacatctggtggactggtgactta 139
                ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 22223242 tggtgcaataagcaatgtaacacttcggcagccagctacatctggtggacttgtgactta 22223183

                     
Query: 140      cgagg 144
                 ||||
Sbjct: 22223182 tgagg 22223178



 Score =  159 bits (80), Expect = 1e-35
 Identities = 122/136 (89%)
 Strand = Plus / Minus

                                                                            
Query: 142      agggtcgatttgagatcatctccctatctggttcattcctgcttgcagaagatggtgata 201
                |||| ||||||||||||||||| ||||| ||||| |||||||||||||| ||||| || |
Sbjct: 22222642 agggccgatttgagatcatctctctatcaggttctttcctgcttgcagaggatggcgaca 22222583

                                                                            
Query: 202      ctcgtagcaggactggtggattgagcgttgcacttgcaggatctgatggccgggttctcg 261
                |||| ||||||||||||||  |||| || ||||||||||||||||||||||| ||||| |
Sbjct: 22222582 ctcgcagcaggactggtggcctgagtgtcgcacttgcaggatctgatggccgagttcttg 22222523

                                
Query: 262      gtggatgtgtagctgg 277
                ||||||||||||||||
Sbjct: 22222522 gtggatgtgtagctgg 22222507



 Score =  153 bits (77), Expect = 6e-34
 Identities = 149/173 (86%)
 Strand = Plus / Minus

                                                                            
Query: 303      caggttgtcgtggctagtttcatagccgaaggtaaaaaatcaaagcctgctgagccacgg 362
                ||||||||||||||||| ||||| || |||||||| ||||| ||||| |  ||| || ||
Sbjct: 22222380 caggttgtcgtggctagcttcatcgcggaaggtaagaaatcgaagccagtcgagacaagg 22222321

                                                                            
Query: 363      aaggttgaaccgatgtccgcacctccacagatggccacctatgtgccagctccagtggct 422
                ||||| ||||||||||| || |||||||||||||| ||||| ||||||||||| ||||| 
Sbjct: 22222320 aaggtcgaaccgatgtcagcgcctccacagatggcaacctacgtgccagctccggtggcg 22222261

                                                                     
Query: 423      agccctccctcggagggtacatccagcgcatcatccgatgactctggcagccc 475
                ||||| || |||||||| |||||||| | ||| ||||||||||| ||||||||
Sbjct: 22222260 agcccgccatcggagggcacatccagtggatcgtccgatgactcgggcagccc 22222208



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>gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003O19 genomic sequence, complete
             sequence
          Length = 172427

 Score =  184 bits (93), Expect = 2e-43
 Identities = 117/125 (93%)
 Strand = Plus / Minus

                                                                         
Query: 20    ttcaaaaataatgtccttctcacagcaaggacctcgcacagtttgcattctttcagcaaa 79
             ||||||||| ||| |||||||||||||||| |||||||||||||||||||| ||||| ||
Sbjct: 40545 ttcaaaaattatggccttctcacagcaaggccctcgcacagtttgcattctctcagcgaa 40486

                                                                         
Query: 80    tggcgcaataagcaatgtaacacttcggcagccagctacatctggtggactggtgactta 139
             ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 40485 tggtgcaataagcaatgtaacacttcggcagccagctacatctggtggacttgtgactta 40426

                  
Query: 140   cgagg 144
              ||||
Sbjct: 40425 tgagg 40421



 Score =  159 bits (80), Expect = 1e-35
 Identities = 122/136 (89%)
 Strand = Plus / Minus

                                                                         
Query: 142   agggtcgatttgagatcatctccctatctggttcattcctgcttgcagaagatggtgata 201
             |||| ||||||||||||||||| ||||| ||||| |||||||||||||| ||||| || |
Sbjct: 39885 agggccgatttgagatcatctctctatcaggttctttcctgcttgcagaggatggcgaca 39826

                                                                         
Query: 202   ctcgtagcaggactggtggattgagcgttgcacttgcaggatctgatggccgggttctcg 261
             |||| ||||||||||||||  |||| || ||||||||||||||||||||||| ||||| |
Sbjct: 39825 ctcgcagcaggactggtggcctgagtgtcgcacttgcaggatctgatggccgagttcttg 39766

                             
Query: 262   gtggatgtgtagctgg 277
             ||||||||||||||||
Sbjct: 39765 gtggatgtgtagctgg 39750



 Score =  153 bits (77), Expect = 6e-34
 Identities = 149/173 (86%)
 Strand = Plus / Minus

                                                                         
Query: 303   caggttgtcgtggctagtttcatagccgaaggtaaaaaatcaaagcctgctgagccacgg 362
             ||||||||||||||||| ||||| || |||||||| ||||| ||||| |  ||| || ||
Sbjct: 39623 caggttgtcgtggctagcttcatcgcggaaggtaagaaatcgaagccagtcgagacaagg 39564

                                                                         
Query: 363   aaggttgaaccgatgtccgcacctccacagatggccacctatgtgccagctccagtggct 422
             ||||| ||||||||||| || |||||||||||||| ||||| ||||||||||| ||||| 
Sbjct: 39563 aaggtcgaaccgatgtcagcgcctccacagatggcaacctacgtgccagctccggtggcg 39504

                                                                  
Query: 423   agccctccctcggagggtacatccagcgcatcatccgatgactctggcagccc 475
             ||||| || |||||||| |||||||| | ||| ||||||||||| ||||||||
Sbjct: 39503 agcccgccatcggagggcacatccagtggatcgtccgatgactcgggcagccc 39451



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  184 bits (93), Expect = 2e-43
 Identities = 117/125 (93%)
 Strand = Plus / Minus

                                                                            
Query: 20       ttcaaaaataatgtccttctcacagcaaggacctcgcacagtttgcattctttcagcaaa 79
                ||||||||| ||| |||||||||||||||| |||||||||||||||||||| ||||| ||
Sbjct: 22235370 ttcaaaaattatggccttctcacagcaaggccctcgcacagtttgcattctctcagcgaa 22235311

                                                                            
Query: 80       tggcgcaataagcaatgtaacacttcggcagccagctacatctggtggactggtgactta 139
                ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 22235310 tggtgcaataagcaatgtaacacttcggcagccagctacatctggtggacttgtgactta 22235251

                     
Query: 140      cgagg 144
                 ||||
Sbjct: 22235250 tgagg 22235246



 Score =  159 bits (80), Expect = 1e-35
 Identities = 122/136 (89%)
 Strand = Plus / Minus

                                                                            
Query: 142      agggtcgatttgagatcatctccctatctggttcattcctgcttgcagaagatggtgata 201
                |||| ||||||||||||||||| ||||| ||||| |||||||||||||| ||||| || |
Sbjct: 22234710 agggccgatttgagatcatctctctatcaggttctttcctgcttgcagaggatggcgaca 22234651

                                                                            
Query: 202      ctcgtagcaggactggtggattgagcgttgcacttgcaggatctgatggccgggttctcg 261
                |||| ||||||||||||||  |||| || ||||||||||||||||||||||| ||||| |
Sbjct: 22234650 ctcgcagcaggactggtggcctgagtgtcgcacttgcaggatctgatggccgagttcttg 22234591

                                
Query: 262      gtggatgtgtagctgg 277
                ||||||||||||||||
Sbjct: 22234590 gtggatgtgtagctgg 22234575



 Score =  153 bits (77), Expect = 6e-34
 Identities = 149/173 (86%)
 Strand = Plus / Minus

                                                                            
Query: 303      caggttgtcgtggctagtttcatagccgaaggtaaaaaatcaaagcctgctgagccacgg 362
                ||||||||||||||||| ||||| || |||||||| ||||| ||||| |  ||| || ||
Sbjct: 22234448 caggttgtcgtggctagcttcatcgcggaaggtaagaaatcgaagccagtcgagacaagg 22234389

                                                                            
Query: 363      aaggttgaaccgatgtccgcacctccacagatggccacctatgtgccagctccagtggct 422
                ||||| ||||||||||| || |||||||||||||| ||||| ||||||||||| ||||| 
Sbjct: 22234388 aaggtcgaaccgatgtcagcgcctccacagatggcaacctacgtgccagctccggtggcg 22234329

                                                                     
Query: 423      agccctccctcggagggtacatccagcgcatcatccgatgactctggcagccc 475
                ||||| || |||||||| |||||||| | ||| ||||||||||| ||||||||
Sbjct: 22234328 agcccgccatcggagggcacatccagtggatcgtccgatgactcgggcagccc 22234276



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>ref|XM_473713.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1140

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                       
Query: 174 tcattcctgcttgcagaagatggtgatactcgtagcaggactggtggattgagcgttgca 233
           ||||| ||||| ||||| ||||| || ||||||||||| || ||||| ||||| || |||
Sbjct: 706 tcatttctgctcgcagaggatggcgacactcgtagcagaacaggtggtttgagtgtggca 765

                
Query: 234 cttgc 238
           |||||
Sbjct: 766 cttgc 770



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>gb|AC152498.11| Medicago truncatula clone mth2-38m20, complete sequence
          Length = 127132

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 42    cagcaaggacctcgcacagtttgcattctttcagcaaatgg 82
             ||||||||||||||  | || ||||||||||||||||||||
Sbjct: 31130 cagcaaggacctcgagctgtatgcattctttcagcaaatgg 31170



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>dbj|AB110206.2| Oryza sativa (japonica cultivar-group) mRNA for hypothetical
           protein, complete cds, contig of clone: OsAHP1SE2 and
           23C4BG007
          Length = 1517

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                       
Query: 174 tcattcctgcttgcagaagatggtgatactcgtagcaggactggtggattgagcgttgca 233
           ||||| ||||| ||||| ||||| || ||||||||||| || ||||| ||||| || |||
Sbjct: 708 tcatttctgctcgcagaggatggcgacactcgtagcagaacaggtggtttgagtgtggca 767

                
Query: 234 cttgc 238
           |||||
Sbjct: 768 cttgc 772



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                            
Query: 174      tcattcctgcttgcagaagatggtgatactcgtagcaggactggtggattgagcgttgca 233
                ||||| ||||| ||||| ||||| || ||||||||||| || ||||| ||||| || |||
Sbjct: 29788150 tcatttctgctcgcagaggatggcgacactcgtagcagaacaggtggtttgagtgtggca 29788091

                     
Query: 234      cttgc 238
                |||||
Sbjct: 29788090 cttgc 29788086



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                            
Query: 20       ttcaaaaataatgtccttctcacagcaaggacctcgcacagtttgcattctttcagcaaa 79
                ||||||||||||| | || ||||| ||||| ||||||||    |||||  ||||||||||
Sbjct: 29789085 ttcaaaaataatggcattttcacaacaaggccctcgcactacatgcataatttcagcaaa 29789026

                      
Query: 80       tggcgc 85
                ||||||
Sbjct: 29789025 tggcgc 29789020



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>dbj|AK070449.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048G11, full
            insert sequence
          Length = 1794

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                        
Query: 174  tcattcctgcttgcagaagatggtgatactcgtagcaggactggtggattgagcgttgca 233
            ||||| ||||| ||||| ||||| || ||||||||||| || ||||| ||||| || |||
Sbjct: 999  tcatttctgctcgcagaggatggcgacactcgtagcagaacaggtggtttgagtgtggca 1058

                 
Query: 234  cttgc 238
            |||||
Sbjct: 1059 cttgc 1063



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>dbj|AK060672.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-G12, full
           insert sequence
          Length = 1677

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                       
Query: 174 tcattcctgcttgcagaagatggtgatactcgtagcaggactggtggattgagcgttgca 233
           ||||| ||||| ||||| ||||| || ||||||||||| || ||||| ||||| || |||
Sbjct: 867 tcatttctgctcgcagaggatggcgacactcgtagcagaacaggtggtttgagtgtggca 926

                
Query: 234 cttgc 238
           |||||
Sbjct: 927 cttgc 931



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>emb|AL662981.3|OSJN00182 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086O06,
             complete sequence
          Length = 178552

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                         
Query: 174   tcattcctgcttgcagaagatggtgatactcgtagcaggactggtggattgagcgttgca 233
             ||||| ||||| ||||| ||||| || ||||||||||| || ||||| ||||| || |||
Sbjct: 69076 tcatttctgctcgcagaggatggcgacactcgtagcagaacaggtggtttgagtgtggca 69017

                  
Query: 234   cttgc 238
             |||||
Sbjct: 69016 cttgc 69012



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                         
Query: 20    ttcaaaaataatgtccttctcacagcaaggacctcgcacagtttgcattctttcagcaaa 79
             ||||||||||||| | || ||||| ||||| ||||||||    |||||  ||||||||||
Sbjct: 70011 ttcaaaaataatggcattttcacaacaaggccctcgcactacatgcataatttcagcaaa 69952

                   
Query: 80    tggcgc 85
             ||||||
Sbjct: 69951 tggcgc 69946



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>ref|XM_750182.1| Aspergillus fumigatus Af293 alpha-N-acetylglucosaminidase
           (Afu2g09410) partial mRNA
          Length = 2271

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 104 tcggcagccagctacatctgg 124
           |||||||||||||||||||||
Sbjct: 305 tcggcagccagctacatctgg 325



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>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome
          Length = 2174500

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 13     ctattggttcaaaaataatgt 33
              |||||||||||||||||||||
Sbjct: 236151 ctattggttcaaaaataatgt 236131



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>gb|AC110520.12| Mus musculus chromosome 7, clone RP23-24N16, complete sequence
          Length = 248540

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 182    gcttgcagaagatggtgata 201
              ||||||||||||||||||||
Sbjct: 216577 gcttgcagaagatggtgata 216596



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>ref|XM_483314.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1524

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 67  ttctttcagcaaatggcgcaataagcaatgtaacacttcg 106
           |||||||||||||||| || |||   ||||||||||||||
Sbjct: 645 ttctttcagcaaatggtgccatatcaaatgtaacacttcg 684



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>ref|XM_483313.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1434

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 67  ttctttcagcaaatggcgcaataagcaatgtaacacttcg 106
           |||||||||||||||| || |||   ||||||||||||||
Sbjct: 656 ttctttcagcaaatggtgccatatcaaatgtaacacttcg 695



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>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 243    tctgatggccgggttctcggtggatgtg 270
              |||||||| |||||||||||||| ||||
Sbjct: 323093 tctgatggtcgggttctcggtggctgtg 323120



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>gb|AC160464.3| Mus musculus chromosome 7, clone RP23-256J14, complete sequence
          Length = 175716

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 182    gcttgcagaagatggtgata 201
              ||||||||||||||||||||
Sbjct: 168641 gcttgcagaagatggtgata 168622



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>gb|AC105133.6| Homo sapiens chromosome 15, clone CTD-2071N1, complete sequence
          Length = 115519

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 397    ccacctatgtgccagctcca 416
              ||||||||||||||||||||
Sbjct: 104433 ccacctatgtgccagctcca 104452



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>gb|AC063961.10| Homo sapiens chromosome 10 clone RP11-183E9, complete sequence
          Length = 147202

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 388   cacagatggccacctatgtg 407
             ||||||||||||||||||||
Sbjct: 96194 cacagatggccacctatgtg 96213



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>dbj|AK081086.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:B930083J22
           product:unclassifiable, full insert sequence
          Length = 823

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 386 tccacagatggccacctatg 405
           ||||||||||||||||||||
Sbjct: 715 tccacagatggccacctatg 696



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                           
Query: 27      ataatgtccttctcacagcaaggacctcgcacagtttgcattct 70
               |||||||||||||| ||| | || |||||| | |||||||||||
Sbjct: 2305600 ataatgtccttctcgcagaagggtcctcgctcggtttgcattct 2305643



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                        
Query: 67       ttctttcagcaaatggcgcaataagcaatgtaacacttcg 106
                |||||||||||||||| || |||   ||||||||||||||
Sbjct: 25399095 ttctttcagcaaatggtgccatatcaaatgtaacacttcg 25399056



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>gb|AC110755.6| Homo sapiens BAC clone CTD-2125K8 from 4, complete sequence
          Length = 38902

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 30   atgtccttctcacagcaagg 49
            ||||||||||||||||||||
Sbjct: 7035 atgtccttctcacagcaagg 7054



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>dbj|AP006506.1| Mus musculus genomic DNA, chromosome 4, clone: RP23-284M8, complete
              sequence
          Length = 255195

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 406    tgccagctccagtggctagc 425
              ||||||||||||||||||||
Sbjct: 136822 tgccagctccagtggctagc 136841



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>gb|AC007239.3| Homo sapiens BAC clone RP11-83A12 from 2, complete sequence
          Length = 139391

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 25     aaataatgtccttctcacag 44
              ||||||||||||||||||||
Sbjct: 110880 aaataatgtccttctcacag 110861



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>dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0711H09
          Length = 185858

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 67    ttctttcagcaaatggcgcaataagcaatgtaacacttcg 106
             |||||||||||||||| || |||   ||||||||||||||
Sbjct: 30411 ttctttcagcaaatggtgccatatcaaatgtaacacttcg 30372



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>dbj|AK105419.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-A12, full
            insert sequence
          Length = 1926

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 119/152 (78%)
 Strand = Plus / Plus

                                                                        
Query: 30   atgtccttctcacagcaaggacctcgcacagtttgcattctttcagcaaatggcgcaata 89
            ||||| ||||| ||||| ||| ||||   ||| ||| |||| |||||||| ||||| |||
Sbjct: 1061 atgtcattctcccagcatggaactcgtggagtatgcgttctgtcagcaaacggcgccata 1120

                                                                        
Query: 90   agcaatgtaacacttcggcagccagctacatctggtggactggtgacttacgagggtcga 149
               ||||| |||||||||||  | ||||| || ||||||   || || |||||||| |||
Sbjct: 1121 tcaaatgtgacacttcggcaagctgctacttccggtggaacagtaacatacgagggacga 1180

                                            
Query: 150  tttgagatcatctccctatctggttcattcct 181
            ||||||||  | || || || |||||||||||
Sbjct: 1181 tttgagatactgtcgctgtccggttcattcct 1212



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>dbj|AK101825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068A08, full
            insert sequence
          Length = 2184

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 101/128 (78%)
 Strand = Plus / Plus

                                                                        
Query: 30   atgtccttctcacagcaaggacctcgcacagtttgcattctttcagcaaatggcgcaata 89
            ||||| ||||| ||||| ||| ||||   ||| ||| |||| |||||||| ||||| |||
Sbjct: 1340 atgtcattctcccagcatggaactcgtggagtatgcgttctgtcagcaaacggcgccata 1399

                                                                        
Query: 90   agcaatgtaacacttcggcagccagctacatctggtggactggtgacttacgagggtcga 149
               ||||| |||||||||||  | ||||| || ||||||   || || |||||||| |||
Sbjct: 1400 tcaaatgtgacacttcggcaagctgctacttccggtggaacagtaacatacgagggacga 1459

                    
Query: 150  tttgagat 157
            ||||||||
Sbjct: 1460 tttgagat 1467



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>dbj|AK067561.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112F01, full
           insert sequence
          Length = 1526

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 67  ttctttcagcaaatggcgcaataagcaatgtaacacttcg 106
           |||||||||||||||| || |||   ||||||||||||||
Sbjct: 646 ttctttcagcaaatggtgccatatcaaatgtaacacttcg 685



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                           
Query: 27      ataatgtccttctcacagcaaggacctcgcacagtttgcattct 70
               |||||||||||||| ||| | || |||||| | |||||||||||
Sbjct: 2305544 ataatgtccttctcgcagaagggtcctcgctcggtttgcattct 2305587



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>emb|AL954364.5|CNS08CCZ Oryza sativa chromosome 12, . BAC OSJNBa0023M16 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 156258

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 27    ataatgtccttctcacagcaaggacctcgcacagtttgcattct 70
             |||||||||||||| ||| | || |||||| | |||||||||||
Sbjct: 30791 ataatgtccttctcgcagaagggtcctcgctcggtttgcattct 30834



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>gb|AC147559.5| Mus musculus BAC clone RP23-391P1 from 3, complete sequence
          Length = 188305

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 386    tccacagatggccacctatg 405
              ||||||||||||||||||||
Sbjct: 115325 tccacagatggccacctatg 115306



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>gb|AC131724.4| Mus musculus BAC clone RP23-129E9 from 19, complete sequence
          Length = 225611

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   ttcctgcttgcagaagatgg 196
             ||||||||||||||||||||
Sbjct: 95833 ttcctgcttgcagaagatgg 95852



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>emb|AL611967.21| Mouse DNA sequence from clone RP23-121D17 on chromosome 4, complete
             sequence
          Length = 173824

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 406   tgccagctccagtggctagc 425
             ||||||||||||||||||||
Sbjct: 31108 tgccagctccagtggctagc 31089


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,782,860
Number of Sequences: 3902068
Number of extensions: 3782860
Number of successful extensions: 62386
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 62210
Number of HSP's gapped (non-prelim): 166
length of query: 477
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 455
effective length of database: 17,147,199,772
effective search space: 7801975896260
effective search space used: 7801975896260
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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